Psyllid ID: psy16526
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 422 | 2.2.26 [Sep-21-2011] | |||||||
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | yes | N/A | 0.691 | 0.467 | 0.53 | 5e-94 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.703 | 0.576 | 0.380 | 4e-61 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.703 | 0.576 | 0.380 | 5e-61 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.703 | 0.576 | 0.370 | 5e-61 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.703 | 0.576 | 0.377 | 1e-60 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.703 | 0.576 | 0.370 | 2e-60 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.703 | 0.576 | 0.400 | 1e-59 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.703 | 0.576 | 0.377 | 2e-59 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.715 | 0.586 | 0.371 | 5e-59 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.715 | 0.586 | 0.377 | 7e-59 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 345 bits (884), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 213/300 (71%), Gaps = 8/300 (2%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML E+GNLPVAIVRPSIV +S+NEP AGWVDN+NGPTG+++A KG FRTM+C +N VA
Sbjct: 329 MLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVA 388
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D+VPVDIVINLMI AAW+TA + N+ + +YNCCTGQRNPI W +FV ++ S+R+
Sbjct: 389 DMVPVDIVINLMIAAAWRTATRKSNN-----LLIYNCCTGQRNPIIWSEFVKHAMTSVRK 443
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+PL WYP G R N N + H LPA++LD + + GKKPF+V +QNK+ KA
Sbjct: 444 HPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAV 503
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
+CLEYF+T++WRF DDNV L +LS +DR +F FDV I+W KY+ YVLG R F+FK+
Sbjct: 504 ECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQ 563
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ SLP +RKR+ ++ ++H+L+KL+ +LL WR LM RS W F++ + LR R
Sbjct: 564 RPESLPASRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLWSSFLE---NALRMAR 620
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 177/302 (58%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RT+ N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N+ + AAW + V N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNMSLAAAWYSGV-----NRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY LG + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I ++++L+WR+ + RS +AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (599), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 175/302 (57%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW Y N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNTSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I ++++L+WR+ + RS +AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (599), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 178/302 (58%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L +AIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N VA
Sbjct: 214 VVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DL+PVD+V+N + AAW Y N + + VYNC TG NP W + + + ++
Sbjct: 274 DLIPVDVVVNTTLAAAW-----YSGVNRPKNMLVYNCTTGGTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L +A
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPALLYDVYLRITGRSPRMMKTITRLHRAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + ++N L + LS ED++VF+FDV ++ W +Y+ NY +G + ++ E
Sbjct: 389 MLLEYFTSNSWVWNNENTNMLMSQLSPEDKKVFNFDVRQLHWAEYMENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I ++++L+WR+ + RS +AR+ W+ + + F L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVVLIWRVFIARSQMARNIWYFVVSMCFKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 177/302 (58%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RT+ N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N+ + AAW + V N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNMSLAAAWYSGV-----NRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + +NV L L+ ED++ F+ DV ++ W +YI NY LG + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTENVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I ++++L+WR+ + RS +AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L AI+RPSIV +S EP GW+DN+NGP+G+ AAGKG RTM VA
Sbjct: 214 VVQQEGARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNGAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N+ + AAW Y N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNMTLAAAW-----YSGVNRPRNIMVYNCTTGGTNPFHWSEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRITGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + +N+ L LS ED++ F+FDV ++ W +Y+ NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWIWNTENMTMLMNQLSPEDKKTFNFDVRQLHWAEYMENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I ++++L+WR+ + RS +AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 180/302 (59%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW + V N + I VYNC TG NP W + +Y S +
Sbjct: 274 DLVPVDVVVNTSLAAAWYSGV-----NRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSFKT 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL+ + +P + SN + + H +PA +LDL LTG+KP+M++ +L KA
Sbjct: 329 NPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I ++++L+WR+ + RS +AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 173/302 (57%), Gaps = 5/302 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E GNL +AI+RPSI+ ++ EP GWVDN NGP+G+I AAGKGF R++ VA
Sbjct: 214 VVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLIIAAGKGFLRSIRATPMAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DL+P D V+NL + W TAV S VY+C +G NP +W + + +
Sbjct: 274 DLIPADTVVNLTLAVGWYTAVHRPKST-----LVYHCTSGNLNPCNWGKMGLQVLATFEK 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
P P+ +N I+ + HR PA + D + LTG+KP M ++ N+L +
Sbjct: 329 IPFERAFRRPNADFTTNNITTHYWNAVSHRAPAIIYDFYLRLTGRKPRMTKLMNRLLRTL 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF + W + N L + LS ED+RVF+FDV +++W +YI NYVLG++ ++ KE
Sbjct: 389 SMLEYFVNRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ +P+A++ L ++ IH L + L+ WRLL+ RS VAR+ W + + L R
Sbjct: 449 DMAGIPEAKQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 178/307 (57%), Gaps = 5/307 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q ESGNL VAIVRPSIV ++ EP GWVDN NGP+G+I A GKGF R++ VA
Sbjct: 214 VVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKGFLRSIKATPMAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D++PVD V+NL I W TAV S +Y+ +G NP +W + ++ +
Sbjct: 274 DVIPVDTVVNLTIAVGWYTAVHRPKST-----LIYHSTSGNLNPCNWYKMGLQVLATIEK 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
P P+ ++ + + HR+PA + D + LTG+KP M+++ N+L K
Sbjct: 329 IPFESAFRRPNADFTTSNFTTHYWNTVSHRVPAIIYDFYLRLTGRKPRMLKLMNRLLKTI 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF W + +N L + LS ED+RVF+FDV +++W +YI NYVLG++ ++ KE
Sbjct: 389 SMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ +P+A++ L ++ IH L + L++WRLL+ RS +AR+ W + + + R
Sbjct: 449 DLAGIPKAKQHLRRLRNIHYLFNTALFLIIWRLLIARSQMARNVWFFIVSFCYKFISYFR 508
Query: 301 SNELAKI 307
++ K+
Sbjct: 509 ASSTLKV 515
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (581), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 5/307 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q ES NL +AI+RPSIV ++ EP GWVDN NGP GII A GKGF R + VA
Sbjct: 214 VVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D++PVD V+NLM+ W TAV S VY+ +G NP +W + + +
Sbjct: 274 DVIPVDTVVNLMLAVGWYTAVHRPKST-----LVYHITSGNMNPCNWHKMGVQVLATFEK 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
P P+ SN ++ + HR PA + D + LTG+KP M ++ N+L +
Sbjct: 329 IPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLTGRKPRMTKLMNRLLRTV 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF + W + N L + LS ED+RVF+FDV +++W +YI NYVLG++ ++ KE
Sbjct: 389 SMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQER 300
+ +P+A++RL ++ IH L + L+ WRLL+ RS +AR+ W + + L R
Sbjct: 449 DMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLLIARSQMARNVWFFIVSFCYKFLSYFR 508
Query: 301 SNELAKI 307
++ K+
Sbjct: 509 ASSTLKV 515
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 422 | ||||||
| 307176727 | 606 | Fatty acyl-CoA reductase 1 [Camponotus f | 0.682 | 0.475 | 0.593 | 1e-104 | |
| 345489767 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.691 | 0.564 | 0.575 | 8e-99 | |
| 383859001 | 516 | PREDICTED: putative fatty acyl-CoA reduc | 0.691 | 0.565 | 0.582 | 2e-95 | |
| 242012541 | 522 | male sterility domain-containing protein | 0.691 | 0.559 | 0.565 | 2e-95 | |
| 307211545 | 516 | Fatty acyl-CoA reductase 1 [Harpegnathos | 0.604 | 0.494 | 0.611 | 1e-94 | |
| 322787692 | 469 | hypothetical protein SINV_12809 [Solenop | 0.590 | 0.530 | 0.637 | 8e-94 | |
| 195124225 | 683 | GI21145 [Drosophila mojavensis] gi|19391 | 0.675 | 0.417 | 0.548 | 1e-93 | |
| 195380521 | 660 | GJ20993 [Drosophila virilis] gi|19414381 | 0.675 | 0.431 | 0.544 | 2e-93 | |
| 194756762 | 627 | GF11398 [Drosophila ananassae] gi|190621 | 0.675 | 0.454 | 0.541 | 5e-93 | |
| 195425526 | 639 | GK10652 [Drosophila willistoni] gi|19415 | 0.675 | 0.446 | 0.537 | 1e-92 |
| >gi|307176727|gb|EFN66142.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 221/293 (75%), Gaps = 5/293 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
MLQ E G+LPVAIVRPSIV+SS EPVAGWVDN NGPTGIIAAAGKGFFRTMLCH++KVA
Sbjct: 312 MLQRERGSLPVAIVRPSIVLSSYREPVAGWVDNCNGPTGIIAAAGKGFFRTMLCHKDKVA 371
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVDIVINLMICAAWKTA ++ I++YNCCTGQ+NPI+WK+FV+ SF+ R
Sbjct: 372 DLVPVDIVINLMICAAWKTATHRTDT-----ISIYNCCTGQQNPITWKEFVDLSFKYSRL 426
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+P + WYPDG+C S+ I N +CV L H LPAH+LD F+ L G +P MVR+Q KL KA
Sbjct: 427 HPANDAVWYPDGRCHSSIILNKLCVTLQHTLPAHILDTFARLKGSRPIMVRVQAKLSKAT 486
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
KCLEYFST++W F DDNVR L LS EDR +F FDV +I+WP Y+ +Y+LGIR FI KE
Sbjct: 487 KCLEYFSTKQWNFRDDNVRRLGEQLSPEDREIFMFDVKQINWPSYLEHYILGIRQFILKE 546
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLF 293
+LP AR + K+ W+HR + M++++ R+L+LRS+ R ++ + ++
Sbjct: 547 SPDTLPAARSHITKLYWLHRAMQFGMLIIMLRVLLLRSAATRGAFFSLLSIVL 599
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345489767|ref|XP_003426226.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 2 [Nasonia vitripennis] gi|345489769|ref|XP_001601849.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 215/297 (72%), Gaps = 5/297 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML+ E G+LPVAIVRPSIV+SS EPVAGWVDN+NGPTGIIAAAGKGFFRTMLCHE+KVA
Sbjct: 223 MLRTECGSLPVAIVRPSIVLSSFREPVAGWVDNWNGPTGIIAAAGKGFFRTMLCHEDKVA 282
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVDIVINLMI AAW+TA + IT+YNC TGQ+NPI+WK FV+ SF+ R
Sbjct: 283 DLVPVDIVINLMIVAAWRTATHRTDQ-----ITIYNCSTGQQNPITWKHFVDLSFKYSRM 337
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+P + WYP G+CRS+ N +CV H +PA+ LDL + L G KP M+R+Q KL KAA
Sbjct: 338 HPTNGAIWYPGGRCRSSASLNRICVAFQHIVPAYALDLLANLRGSKPIMMRVQAKLHKAA 397
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
KCLEYFSTQ+W F D+NV+ L LS +DR+ F FDV +IDWP Y+ NY+LGIR FI KE
Sbjct: 398 KCLEYFSTQQWNFKDENVKRLGQQLSADDRQTFMFDVKQIDWPAYLENYILGIRQFILKE 457
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLR 297
+LP AR + ++ W+H+ ++ +LLV RLL+ S+ AR +W + + R
Sbjct: 458 SPETLPAARSHITRLYWLHKAVQVGTVLLVMRLLLSHSTWARGAWFSLLSFVLRMCR 514
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859001|ref|XP_003704987.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/297 (58%), Positives = 217/297 (73%), Gaps = 5/297 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
+LQ ESG LPVAIVRPSIV+SS+ EPVAGWVDN NGPTG+IAA GKG FRTMLCHEN +A
Sbjct: 222 ILQLESGYLPVAIVRPSIVLSSLREPVAGWVDNCNGPTGLIAAVGKGVFRTMLCHENMIA 281
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVDIVINLMICAAW+TA +N + I VYNCCTGQ+NPI+WKQFV+ F+ R+
Sbjct: 282 DLVPVDIVINLMICAAWRTA-----TNRTKTIPVYNCCTGQQNPITWKQFVDLMFKYTRK 336
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+P + WYP G+CR++ I N MC H +PA++LD F L GK MV +Q KL KAA
Sbjct: 337 HPPNGAIWYPGGRCRNSVIMNQMCALFQHVVPAYILDFFCRLKGKPTIMVGLQVKLRKAA 396
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
KCLEYFSTQ+W F DDNVR L LSLEDR+ F FDV +IDWP Y+ +Y+LGIR F+ KE
Sbjct: 397 KCLEYFSTQQWNFRDDNVRNLEEQLSLEDRQTFMFDVRQIDWPTYLEHYILGIRHFLLKE 456
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLR 297
+LP AR + ++ W H+ + M+L+V R L+LRSSV R++ + + ++ R
Sbjct: 457 SPDTLPAARTHIKRLYWFHKALEFAMLLVVLRYLLLRSSVTRTACYSLLSVVLRMCR 513
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242012541|ref|XP_002426991.1| male sterility domain-containing protein, putative [Pediculus humanus corporis] gi|212511220|gb|EEB14253.1| male sterility domain-containing protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/297 (56%), Positives = 213/297 (71%), Gaps = 5/297 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML ESGNLPVAIVRP+IV+SS NEPV+GWVDN+NGPTG++AA GKG FR MLC N VA
Sbjct: 226 MLMKESGNLPVAIVRPTIVLSSWNEPVSGWVDNWNGPTGLVAACGKGLFRAMLCEVNSVA 285
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+VINLMI AAWKTA ++ + ++VYNCCTG + PI+W F+ ++++
Sbjct: 286 DLVPVDVVINLMIVAAWKTA-----TSKSIEVSVYNCCTGMQKPITWGSFIYQCIHNLQK 340
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPLS WYP G C SN + + + V H PA+ LD F L GKKP MV++ KL+KA
Sbjct: 341 NPLSGAFWYPGGDCFSNRLMHKLVVLSSHAFPAYFLDTFYRLVGKKPIMVKMYQKLEKAR 400
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
+CLEYF QEWRF DDNV+ELN+ LS EDR+ F FDV++IDWPKY+ +YVLGIR FIFKE
Sbjct: 401 QCLEYFGNQEWRFRDDNVQELNSILSPEDRKTFPFDVSQIDWPKYLQDYVLGIRRFIFKE 460
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLR 297
SS+P ARK + K+ WIHRL ++ ++ V R +++RSS AR ID+ R
Sbjct: 461 NPSSIPTARKSIQKLYWIHRLVQICSLMFVLRGVIMRSSQARRLCLFVIDVFLRVYR 517
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307211545|gb|EFN87623.1| Fatty acyl-CoA reductase 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 159/260 (61%), Positives = 196/260 (75%), Gaps = 5/260 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
MLQ E G+LP+AIVRPSIV+SS EPVAGWVDN NGPTGIIAAAGKGFFR MLC+EN VA
Sbjct: 222 MLQREKGSLPIAIVRPSIVLSSFREPVAGWVDNCNGPTGIIAAAGKGFFRNMLCYENMVA 281
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+VINLMICAAWKTA ++ I++YNCCTGQ+NPI+WKQFV SF+ R
Sbjct: 282 DLVPVDMVINLMICAAWKTATHRTDT-----ISIYNCCTGQQNPITWKQFVQMSFKYSRL 336
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+P++ + WYP G+C + + + +CV + H LPAH+LD+ + L G +P MVR+Q KL KA
Sbjct: 337 HPMNDLVWYPGGRCHYSALLHKLCVTIQHTLPAHILDILARLKGTRPVMVRLQTKLYKAT 396
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
KCLEYFST +W F DDNVR L LS EDR +F FDV +IDW Y+ +Y+LGIR FI KE
Sbjct: 397 KCLEYFSTNQWNFRDDNVRRLGEQLSPEDREIFMFDVKQIDWTSYLEHYILGIRQFILKE 456
Query: 241 QASSLPQARKRLYKMLWIHR 260
+LP AR + K+ W+HR
Sbjct: 457 SPDTLPAARSHITKLYWLHR 476
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322787692|gb|EFZ13704.1| hypothetical protein SINV_12809 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 191/254 (75%), Gaps = 5/254 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
MLQ E G+LPVAIVRPSIV+SS EPVAGWVDN NGPTGIIAAAGKGFFRTMLCHE+KVA
Sbjct: 221 MLQRERGSLPVAIVRPSIVLSSYREPVAGWVDNCNGPTGIIAAAGKGFFRTMLCHEDKVA 280
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVDIVINLMICAAW+TA + + I +YNCCTGQ+NPI+WKQFV+ SF+ R
Sbjct: 281 DLVPVDIVINLMICAAWRTATQRIVT-----IPIYNCCTGQQNPITWKQFVDLSFQYCRL 335
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+P WYPDG+C S+ + N +CV H LPA++LD + L G +P MVR+Q KL KAA
Sbjct: 336 HPAKDAIWYPDGRCHSSALLNKLCVVFQHMLPAYILDTLARLKGSRPIMVRVQRKLSKAA 395
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
CLEYFST++W F DDNVR L LS EDR F FDV +IDWP Y+ +Y+LGIR FI KE
Sbjct: 396 NCLEYFSTKQWNFRDDNVRRLGEQLSPEDRETFMFDVRQIDWPSYLEHYILGIRQFILKE 455
Query: 241 QASSLPQARKRLYK 254
+LP AR + K
Sbjct: 456 SPDTLPAARSYITK 469
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195124225|ref|XP_002006594.1| GI21145 [Drosophila mojavensis] gi|193911662|gb|EDW10529.1| GI21145 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 209/290 (72%), Gaps = 5/290 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML E+GNLPVAIVRPSIV +S+NEP AGWVDN+NGPTG+++A KG FRTM+C +N VA
Sbjct: 387 MLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGLFRTMMCEKNYVA 446
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D+VPVDIVINLMI AAW+TA + N+ + +YNCCTGQRNPI W +FV Y+ S+R+
Sbjct: 447 DMVPVDIVINLMIAAAWRTATRKSNN-----LLIYNCCTGQRNPIIWSEFVRYAMSSVRK 501
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+PL WYP G R N N + L H LPAH+LD + + GKKPF+V +QNK+ KA
Sbjct: 502 HPLEGCLWYPTGDLRMNRPMNTLNCILKHFLPAHILDAVARIMGKKPFVVNVQNKIAKAV 561
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
+CLEYF+T++WRF DDNV L +LS +DR +F FDV IDW KY+ YVLG R F+FK+
Sbjct: 562 ECLEYFATRQWRFKDDNVNGLLHTLSPKDREIFVFDVRNIDWDKYVERYVLGFREFLFKQ 621
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFID 290
+ SLP +RKR+ ++ ++H+L K++ +LL WR LM RS W F++
Sbjct: 622 RPESLPASRKRMVRLYYLHQLIKVVAVLLTWRFLMSRSKRLNDLWSAFLE 671
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195380521|ref|XP_002049019.1| GJ20993 [Drosophila virilis] gi|194143816|gb|EDW60212.1| GJ20993 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 158/290 (54%), Positives = 210/290 (72%), Gaps = 5/290 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML E+GNLPVAIVRPSIV +S+NEP AGWVDN+NGPTG+++A KG FRTM+C +N VA
Sbjct: 364 MLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGLFRTMMCEKNYVA 423
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D+VPVDIVINLMI AAW+TA + N+ + +YNCCTGQRNPI W +FV Y+ S+R+
Sbjct: 424 DMVPVDIVINLMIAAAWRTATRKSNN-----LLIYNCCTGQRNPIIWSEFVKYAMSSVRK 478
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+PL WYP G R N N + L H LPAH+LD + + GKKPF+V +QNK+ KA
Sbjct: 479 HPLEGCLWYPTGDLRMNRPMNTLNCILKHFLPAHILDAVARIMGKKPFVVNVQNKIAKAV 538
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
+CLEYF+T++WRF DDNV L +LS +DR +F FDV I+W KY+ YVLG R F+FK+
Sbjct: 539 ECLEYFATRQWRFKDDNVNGLLHTLSPKDREIFVFDVRNINWDKYVERYVLGFREFLFKQ 598
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFID 290
+ SLP +RKR+ ++ ++H+L K++ +LL+WR LM RS W F++
Sbjct: 599 RPESLPASRKRMVRLYYLHQLIKVVAVLLIWRFLMSRSKRLNDLWSAFLE 648
|
Source: Drosophila virilis Species: Drosophila virilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194756762|ref|XP_001960644.1| GF11398 [Drosophila ananassae] gi|190621942|gb|EDV37466.1| GF11398 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 210/290 (72%), Gaps = 5/290 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML E+GNLPVAIVRPSIV +S+NEP AGWVDN+NGPTG+++A KG FRTM+C +N VA
Sbjct: 331 MLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVA 390
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D+VPVDIVINLMI AAW+TA + N+ + +YNCCTGQRNPI W +FV ++ S+R+
Sbjct: 391 DMVPVDIVINLMIAAAWRTATRKSNN-----LLIYNCCTGQRNPIVWSEFVKHAMSSVRK 445
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+PL WYP G R N N + + H LPA++LD + + GKKPF+V +QNK+ KA
Sbjct: 446 HPLEGCLWYPTGDLRMNRPMNTLNCIVKHFLPAYILDGVARIMGKKPFVVSVQNKIAKAV 505
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
+CLEYF+T++WRF DDNV L +LS +DR +F FDV I+W KY+ YVLG R F+FK+
Sbjct: 506 ECLEYFATRQWRFKDDNVHALLNTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQ 565
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFID 290
+ SLP +RKR+ ++ ++H+L+KL+ +LL WR LM RS W F+D
Sbjct: 566 RPESLPASRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLWSAFLD 615
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195425526|ref|XP_002061051.1| GK10652 [Drosophila willistoni] gi|194157136|gb|EDW72037.1| GK10652 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 156/290 (53%), Positives = 211/290 (72%), Gaps = 5/290 (1%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML E+GNLPVAIVRPSIV +S+NEP AGWVDN+NGPTG+++A KG FRTM+C +N VA
Sbjct: 343 MLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGLFRTMMCEKNYVA 402
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D+VPVDIVINLMI AAW+TA + N+ + +YNCCTGQRNPI W +FV ++ S+R+
Sbjct: 403 DMVPVDIVINLMIAAAWRTATRKSNN-----LLIYNCCTGQRNPILWSEFVKHAMTSVRK 457
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
+PL WYP G+ R N N + L H +PA++LD + + GKKPF+V +QNK+ KA
Sbjct: 458 HPLEGCLWYPTGELRMNRPMNTLNCILKHFVPAYILDGVARIMGKKPFVVNVQNKIAKAV 517
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
+CLEYF+T++WRF DDNV L +LS +DR +F FDV I+W KY+ YVLG R F+FK+
Sbjct: 518 ECLEYFATRQWRFKDDNVNALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQ 577
Query: 241 QASSLPQARKRLYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFID 290
+ SLP +RKR+ ++ ++H+L+KL+ +L+ WR LM RS W F+D
Sbjct: 578 RPESLPASRKRMVRLYYLHQLTKLVAVLITWRFLMSRSKRLNDLWSAFLD 627
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 422 | ||||||
| FB|FBgn0034145 | 625 | CG5065 [Drosophila melanogaste | 0.672 | 0.454 | 0.512 | 8.5e-81 | |
| ZFIN|ZDB-GENE-060503-367 | 515 | si:dkey-97m3.1 "si:dkey-97m3.1 | 0.703 | 0.576 | 0.397 | 1.4e-57 | |
| UNIPROTKB|F1NTE5 | 456 | FAR2 "Uncharacterized protein" | 0.703 | 0.651 | 0.370 | 1.1e-55 | |
| RGD|1306647 | 515 | Far1 "fatty acyl CoA reductase | 0.703 | 0.576 | 0.384 | 8e-53 | |
| UNIPROTKB|Q66H50 | 515 | Far1 "Fatty acyl-CoA reductase | 0.703 | 0.576 | 0.384 | 8e-53 | |
| UNIPROTKB|F1SGA0 | 515 | FAR2 "Uncharacterized protein" | 0.715 | 0.586 | 0.351 | 4.4e-52 | |
| UNIPROTKB|E2R4R9 | 514 | FAR1 "Uncharacterized protein" | 0.699 | 0.573 | 0.368 | 5.6e-52 | |
| UNIPROTKB|G8ENM4 | 515 | FAR1 "Uncharacterized protein" | 0.703 | 0.576 | 0.364 | 9.2e-52 | |
| MGI|MGI:1914670 | 515 | Far1 "fatty acyl CoA reductase | 0.703 | 0.576 | 0.364 | 1.5e-51 | |
| UNIPROTKB|A5PJQ0 | 515 | FAR1 "Uncharacterized protein" | 0.703 | 0.576 | 0.360 | 1.5e-51 |
| FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 149/291 (51%), Positives = 203/291 (69%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
ML E+GNLPVAIVRPSIV +S+NEP AGWVDN+NGPTG+++A KG FRTM+C +N VA
Sbjct: 329 MLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVA 388
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D+VPVDIVINLMI AAW+TA + K++N + +YNCCTGQRNPI W +FV ++ S+R+
Sbjct: 389 DMVPVDIVINLMIAAAWRTATR-KSNN----LLIYNCCTGQRNPIIWSEFVKHAMTSVRK 443
Query: 121 NPLSHITWYPDGQCRSN-PISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKA 179
+PL WYP G R N P++ C+ H LPA++LD + + GKKPF+V +QNK+ KA
Sbjct: 444 HPLEGCLWYPTGDLRMNRPMNTLNCI-AKHFLPAYILDGVARIMGKKPFVVNVQNKIAKA 502
Query: 180 AKCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFK 239
+CLEYF+T++WRF DDNV L +LS +DR +F FDV I+W KY+ YVLG R F+FK
Sbjct: 503 VECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFK 562
Query: 240 EQASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFID 290
++ SLP +RKR+ ++ ++H+L+K W F++
Sbjct: 563 QRPESLPASRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLWSSFLE 613
|
|
| ZFIN|ZDB-GENE-060503-367 si:dkey-97m3.1 "si:dkey-97m3.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 120/302 (39%), Positives = 172/302 (56%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q ES L V IVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM + VA
Sbjct: 214 VVQQESAKLNVGIVRPSIVGASWQEPFPGWIDNFNGPSGVFIAAGKGILRTMRASNDAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DL+PVD+VINL + A W TAV N + VYNC TG NP W + ++ + ++
Sbjct: 274 DLIPVDVVINLTLAAGWYTAV-----NKPKTALVYNCTTGGINPFHWGEIEHHVMSTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H++PA + DL L+G KP M+RI N+L KA
Sbjct: 329 NPLEQAFRRPNANITSNYLIYQYWILVSHKVPALLYDLLLRLSGHKPQMMRIFNRLHKAI 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYFS+Q+W + DN+ L A LS +DR++F+FDV +++WP+YI NY +G + ++ E
Sbjct: 389 GLLEYFSSQDWEWNSDNMNMLMAQLSTDDRKIFNFDVRQLNWPEYIENYCIGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
S +P AR+ L K+ I AR+ W+ + L F L R
Sbjct: 449 DMSDIPAARQHLRKLRNIRYTFNTVLLVFIWRVFIARSQMARNIWYFVVSLCFKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
|
| UNIPROTKB|F1NTE5 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 112/302 (37%), Positives = 174/302 (57%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E GNL +AI+RPSIV +S +EP GW+D++NG +GI AAGKG RT++ + VA
Sbjct: 155 LIQQEKGNLNIAIIRPSIVGASWHEPFPGWIDSFNGTSGIFVAAGKGILRTVIANNEAVA 214
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D++PVD+VINL + A W TAV ++ N + VYNC TG NP W + Y + ++
Sbjct: 215 DMIPVDVVINLTLAAGWYTAV-HRPKN----MLVYNCTTGGINPFFWGEMEQYVMSTFKR 269
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + N + + H+ PA + DL+ LTG+KP M++I N+L K+
Sbjct: 270 NPLEQAFRTPNAHLTSNYLINQYWITVSHKAPAILYDLYMRLTGRKPRMMKIINRLHKSM 329
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
L+YFSTQ W + DN+ L L+ ED+++++FDV ++ W +YI +Y LG + ++ E
Sbjct: 330 MLLQYFSTQSWDWSSDNMNMLMGQLNTEDKKLYNFDVRQLHWSEYIESYCLGAKKYLLNE 389
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
S +P A++ L K+ I AR+ W+ + L + L R
Sbjct: 390 DMSGIPAAKQHLRKLRNIRYAFNTTLLVIIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 449
Query: 301 SN 302
++
Sbjct: 450 AS 451
|
|
| RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 116/302 (38%), Positives = 166/302 (54%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW Y N + I VYNC TG NP W + +Y S +
Sbjct: 274 DLVPVDVVVNTSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSFKT 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL+ + +P + SN + + H +PA +LDL LTG+KP+M++ +L KA
Sbjct: 329 NPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
|
| UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 116/302 (38%), Positives = 166/302 (54%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW Y N + I VYNC TG NP W + +Y S +
Sbjct: 274 DLVPVDVVVNTSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSFKT 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL+ + +P + SN + + H +PA +LDL LTG+KP+M++ +L KA
Sbjct: 329 NPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
|
| UNIPROTKB|F1SGA0 FAR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 108/307 (35%), Positives = 166/307 (54%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q ESGN+ +AI+RPSIV ++ EP GWVDN NGP+G+I AAGKGF R + VA
Sbjct: 214 VVQQESGNINIAIIRPSIVGATWQEPFPGWVDNLNGPSGLIIAAGKGFLRCVRATPMAVA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DL+P D V+NL + W TAV S + +Y+C +G NP +W + + +
Sbjct: 274 DLIPADTVVNLTLAVGWYTAVHRPKS-----VLIYHCTSGNFNPCNWGKMALQVLAAFEK 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
P P+ +N I+ + HR PA + D + LTG+KP M ++ N+L +
Sbjct: 329 IPFERAFRRPNADFTTNSITIQYWNAVSHRAPAIIYDFYLRLTGRKPRMTKLMNRLLRTV 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF + W + DN L + LS ED+RVF+FDV +++W +YI NYVLG++ ++ KE
Sbjct: 389 SMLEYFINRSWEWSTDNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
+ +P+A++ L ++ IH L AR+ W + + L R
Sbjct: 449 DMAGIPKAKQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFR 508
Query: 301 SNELAKI 307
++ K+
Sbjct: 509 ASSTLKV 515
|
|
| UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 111/301 (36%), Positives = 163/301 (54%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW Y N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNTSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFI-DLLFDQLRQE 299
+ S LP ARK L K+ I AR+ W+ D +D +++E
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVTTDTTYDFIQEE 508
Query: 300 R 300
R
Sbjct: 509 R 509
|
|
| UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 110/302 (36%), Positives = 162/302 (53%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW Y N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNTSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VLLEYFTSNSWVWSTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
|
| MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 110/302 (36%), Positives = 162/302 (53%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L VAIVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N + AAW Y N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNTSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
|
| UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 109/302 (36%), Positives = 162/302 (53%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++Q E L V IVRPSIV +S EP GW+DN+NGP+G+ AAGKG RTM N +A
Sbjct: 214 VVQQEGAKLNVVIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALA 273
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
DLVPVD+V+N+ + AAW Y N + I VYNC TG NP W + + + ++
Sbjct: 274 DLVPVDVVVNMSLAAAW-----YSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKR 328
Query: 121 NPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAA 180
NPL P+ SN + + + H+ PA + D++ +TG+ P M++ +L KA
Sbjct: 329 NPLEQAFRRPNVNLTSNHLLYYYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLHKAM 388
Query: 181 KCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
LEYF++ W + DNV L L+ ED++ F+ DV ++ W +YI NY +G + ++ E
Sbjct: 389 VFLEYFTSNSWVWSTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448
Query: 241 QASSLPQARKRLYKMLWIHRLSKXXXXXXXXXXXXXXXXXARSSWHLFIDLLFDQLRQER 300
+ S LP ARK L K+ I AR+ W+ + L + L R
Sbjct: 449 EMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSYFR 508
Query: 301 SN 302
++
Sbjct: 509 AS 510
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A1ZAI5 | FACR1_DROME | 1, ., 2, ., 1, ., n, 2 | 0.53 | 0.6919 | 0.4672 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 422 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 7e-49 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-38 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 1e-37 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 5e-29 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 3e-28 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 2e-17 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 5e-17 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 7e-17 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 2e-13 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-12 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 6e-10 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 2e-09 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 7e-09 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 6e-08 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 6e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 7e-04 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 7e-04 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 7e-49
Identities = 62/134 (46%), Positives = 87/134 (64%)
Query: 289 IDLLFDQLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEA 348
D LFD+ R +KI PI GD++EP LG+S D + L + V+++ H AATV FDE
Sbjct: 51 KDKLFDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDER 110
Query: 349 LKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIET 408
L +++IN+LGT RL+EL L+A +HVSTAY N DR+ + E +Y PP DP+K+I+
Sbjct: 111 LDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDI 170
Query: 409 MEWMDDSLVNTLTP 422
+E MDD + TP
Sbjct: 171 LELMDDLELERATP 184
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 1e-38
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++ E GNLP+ IVRPSIV +++ EP GW+DN+NGP G+ A GKG RTM N VA
Sbjct: 204 LVLKERGNLPLVIVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVA 263
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D++PVD+V N ++ AA + V+ + VY+C + NP +W + + +++
Sbjct: 264 DIIPVDVVANALLAAAAYSGVRKPRE-----LEVYHCGSSDVNPFTWGEAEELINQYLKK 318
Query: 121 NP 122
NP
Sbjct: 319 NP 320
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 1e-37
Identities = 43/92 (46%), Positives = 60/92 (65%)
Query: 147 LLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAAKCLEYFSTQEWRFLDDNVRELNASLS 206
LH LPA++LDL L G+KP ++++ K+ K LEYF+T EWRF +DN R L LS
Sbjct: 1 FLHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLS 60
Query: 207 LEDRRVFSFDVTEIDWPKYIANYVLGIRTFIF 238
EDR +F+FD+ IDW Y NY+ G+R ++
Sbjct: 61 EEDRELFNFDIRSIDWDDYFENYIPGLRKYLL 92
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 5e-29
Identities = 39/94 (41%), Positives = 59/94 (62%)
Query: 147 LLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAAKCLEYFSTQEWRFLDDNVRELNASLS 206
H LPA+ LDL L G+KP +V++ K+ K + L+ FS EW F + N REL +S
Sbjct: 1 FYHTLPAYFLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKMS 60
Query: 207 LEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240
ED+++F+FD+ +DW +Y N + GIR ++ KE
Sbjct: 61 EEDKKLFNFDMESLDWDEYFRNAIRGIRKYLLKE 94
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-28
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 252 LYKMLWIHRLSKLLMILLVWRLLMLRSSVARSSWHLFIDLLFDQLRQERSNELAKIKPIL 311
L K+L K+ LV R+ S+ L +R L +I P+
Sbjct: 13 LEKLLRSTPEVKI--YCLV------RAKDGESALERLRQELLKYGLFDRLKALERIIPVA 64
Query: 312 GDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMT 371
GD++EP LG+S D + L + V V+ H+AATV F E N+LGT+ ++ L +M
Sbjct: 65 GDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQMK 124
Query: 372 HLEALIHVSTAYCNCDRE 389
L HVSTAY N +R
Sbjct: 125 KL-PFHHVSTAYVNGERG 141
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 2e-17
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 37/261 (14%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
+L N NLP+ I+RP+++ S+ EP GW++ +I GKG L N V
Sbjct: 246 LLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVL 305
Query: 61 DLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120
D++P D+V+N MI A A G +Y+ + +NP+ + ++++ +
Sbjct: 306 DVIPADMVVNAMIVAMAAHA------GGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359
Query: 121 NPLSHITWYPDGQ---CRSNPISNAMCVF-----LLHRLPAHVLDLFSLLTGKKPFMVRI 172
NP + +G I + M F + + LP L L +++ K R
Sbjct: 360 NPWIN----KEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIILPK-----RY 410
Query: 173 QNK---LDKAAKCL-------EYFSTQEWRFLDDNVRELNASLSLEDRR---VFSFDVTE 219
+K L++ K + + + + F D N +L + +F FD
Sbjct: 411 GDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKS 470
Query: 220 IDWPKYIAN-YVLGIRTFIFK 239
IDW Y+ N ++ G+ ++ K
Sbjct: 471 IDWEDYMTNVHIPGLVKYVLK 491
|
Length = 491 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 5e-17
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDN-YNGPTGIIAAAGKGFFRTMLCHENKV 59
+++ +G LPV I RPSI+ E GW++ GP G++ AG G +L +
Sbjct: 176 LVREAAGGLPVVIYRPSIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDAR 232
Query: 60 ADLVPVDIVINLM 72
DLVPVD V N +
Sbjct: 233 LDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 7e-17
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 34/258 (13%)
Query: 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVA 60
++ + G++PV I+RPS++ S+ +P GW++ I+ GKG L N V
Sbjct: 360 VINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVL 419
Query: 61 DLVPVDIVINLMICA-AWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119
D+VP D+V+N + A A I VY + NP+ ++ +E
Sbjct: 420 DVVPADMVVNATLAAMAK------HGGAAKPEINVYQIASSVVNPLVFQDLARLLYE--- 470
Query: 120 QNPLSHITWYPDGQCRSNPIS-------NAMCVFLLHRLPAHVLD---LFSLLTGKKPFM 169
H P + PI ++M F H L L L + + +
Sbjct: 471 -----HYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSH-LWRDALLRSGLAGMSSSDRKLS 524
Query: 170 VRIQNKLDKAAKCLEYFST--QEW-----RFLDDNVRELNASLSLEDRRVFSFDVTEIDW 222
+++N K+ + +Y ++ + + RF + N + L +S E++ F FDV IDW
Sbjct: 525 QKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDVGSIDW 584
Query: 223 PKYIAN-YVLGIRTFIFK 239
YI N ++ G+R + K
Sbjct: 585 RDYITNVHIPGLRRHVMK 602
|
Length = 605 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 2e-13
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 290 DLLFDQLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEAL 349
+ +E E +++ + GD+T+P LG+S + L V V H AA+ F
Sbjct: 34 LGEAHERIEEAGLEADRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPN 93
Query: 350 KLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDREE-VRE 393
+ + N+ GT+ ++EL ++ +VSTAY +RE +RE
Sbjct: 94 EDAWRTNIDGTEHVLELAAR-LDIQRFHYVSTAYVAGNREGNIRE 137
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 295 QLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF---DEALKL 351
L EL++IK ++GD+++P LG+S +D + L + V V+ H+ A V + E LK
Sbjct: 52 GLNLWDELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELK- 110
Query: 352 SVTINMLGTKRLVELCHEMTHLEALIHVSTA-------YCNCDREEVREIIYSPPYDP 402
N+LGTK L++L L+ L VST Y D EE +++ S P
Sbjct: 111 --PANVLGTKELLKLA-ATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLP 165
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 6e-10
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 292 LFDQLRQE-----RSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD 346
LF L++ +S L+K+ P++G++ E LG+ + + + V V+ +SAA FD
Sbjct: 174 LFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD 233
Query: 347 EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDRE 389
E +++ IN G L+ + L+ + VSTAY N R+
Sbjct: 234 ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ 276
|
Length = 605 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 296 LRQERSNELA----KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF---DEA 348
LR R +I+ + GD++EP LG+S + + L +NV + H+ A V +
Sbjct: 48 LRSYRLWHEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSE 107
Query: 349 LKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382
L+ + N+LGT+ ++ L + L +VST
Sbjct: 108 LRGA---NVLGTREVLRLA-ASGRAKPLHYVSTI 137
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 7e-09
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 289 IDLLFDQLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF--- 345
++ FD R +++ + GD+ EP+LG+S+ + L +NV ++ H+AA V
Sbjct: 44 LEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFP 103
Query: 346 DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381
L+ N+LGT ++ L + L +VS+
Sbjct: 104 YSELR---GANVLGTAEVLRLA-ATGKPKPLHYVSS 135
|
Length = 382 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 6e-08
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
Query: 274 LMLRSSVARSSWHLFID-----LLFDQLRQERSNEL-----AKIKPILGDITEPELGISQ 323
L+LR+S A+S+ D LF LR++ L K+ P+ GDI+ +LG+
Sbjct: 43 LLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKD 102
Query: 324 ND--QKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381
++ +++ K+ + +V + AAT FDE +++ IN LG ++ + ++ L+HVST
Sbjct: 103 SNLREEMWKE-IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161
Query: 382 AY 383
AY
Sbjct: 162 AY 163
|
Length = 491 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 332 NVSVVFHSAATVKFDEAL---KLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDR 388
+ VV H AA V + N++GT L+E + ++ ++ S+A
Sbjct: 30 RLDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASVYGSP 88
Query: 389 EEVREIIYSPP 399
E + E +PP
Sbjct: 89 EGLPEEEETPP 99
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 291 LLFDQLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEAL- 349
D+LR L+ ++ ++ D+T+ +L ++ K V H AA ++
Sbjct: 28 RGLDRLRDGLDPLLSGVEFVVLDLTDRDL-----VDELAKGVPDAVIHLAAQSSVPDSNA 82
Query: 350 ---KLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384
+ +N+ GT L+E ++ + S+
Sbjct: 83 SDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSV 119
|
Length = 314 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 14/81 (17%)
Query: 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAA----TVKFDEALKLSVTINMLGTK 361
++ P++GD+TEP LG+S+ D L + V H AA T +EA N+ GT+
Sbjct: 52 RVVPLVGDLTEPGLGLSEADIAELGD-IDHVVHLAAIYDLTAD-EEA---QRAANVDGTR 106
Query: 362 RLVELCHEMTHLEA--LIHVS 380
+VEL L+A HVS
Sbjct: 107 NVVELAER---LQAATFHHVS 124
|
Length = 657 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 422 | |||
| KOG1221|consensus | 467 | 100.0 | ||
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.97 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.94 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.69 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.68 | |
| KOG1221|consensus | 467 | 99.65 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.6 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.59 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.56 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.5 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.49 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.43 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.42 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.31 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.29 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.26 | |
| KOG1371|consensus | 343 | 99.26 | ||
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.24 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.24 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.24 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.2 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.2 | |
| KOG1430|consensus | 361 | 99.2 | ||
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.19 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.18 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.17 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.17 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.17 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.16 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.16 | |
| KOG1502|consensus | 327 | 99.16 | ||
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.14 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.14 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.13 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.12 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.12 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.12 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.11 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.11 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.11 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.1 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.07 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.07 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.07 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.07 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.06 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.05 | |
| KOG0747|consensus | 331 | 99.05 | ||
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.04 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.03 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 98.99 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.98 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 98.97 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 98.97 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 98.93 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.93 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.87 | |
| KOG1429|consensus | 350 | 98.84 | ||
| PLN02583 | 297 | cinnamoyl-CoA reductase | 98.81 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 98.76 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.67 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.58 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.46 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 98.28 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.27 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.25 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.23 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.16 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 98.01 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.01 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.99 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 97.99 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.93 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 97.92 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.92 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.92 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 97.92 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 97.91 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.91 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.9 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.9 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 97.9 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.89 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.85 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.81 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 97.81 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 97.79 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.77 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.75 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.75 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.74 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 97.73 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.73 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 97.72 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.71 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.71 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 97.71 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.7 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.68 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.67 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.67 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 97.67 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 97.65 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.65 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.64 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.63 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.63 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.63 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.63 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.62 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.62 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.62 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.59 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.59 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 97.58 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.58 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.57 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.55 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.53 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 97.52 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 97.52 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.51 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 97.49 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.49 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.49 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.48 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 97.48 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.47 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.47 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 97.46 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.45 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.43 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.43 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.41 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.4 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.38 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 97.37 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.37 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 97.37 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.37 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.36 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.36 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.35 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 97.35 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.35 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.33 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.31 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.31 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 97.31 | |
| KOG1372|consensus | 376 | 97.3 | ||
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 97.29 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.29 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.29 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.28 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.28 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 97.28 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.27 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.25 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.25 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.24 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.23 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.22 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.2 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.19 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.18 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.17 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.16 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.15 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.14 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.14 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.13 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.12 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.1 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.09 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 97.08 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 97.08 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.06 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.05 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.03 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.03 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.03 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.03 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.02 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.02 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 97.02 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.02 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.99 | |
| KOG1431|consensus | 315 | 96.99 | ||
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.98 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 96.98 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.96 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.96 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.96 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.92 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.91 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 96.91 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 96.9 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.89 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 96.89 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 96.87 | |
| KOG1205|consensus | 282 | 96.85 | ||
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.84 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.83 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 96.81 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.77 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.75 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.73 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.66 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.65 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.64 | |
| PLN00015 | 308 | protochlorophyllide reductase | 96.59 | |
| KOG2774|consensus | 366 | 96.51 | ||
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 96.49 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.49 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 96.47 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 96.46 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.43 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 96.42 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.36 | |
| KOG2865|consensus | 391 | 96.29 | ||
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 96.29 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 96.25 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.22 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.21 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.19 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 96.18 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.18 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 96.18 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.08 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.02 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 95.95 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.94 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.93 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.92 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 95.9 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 95.9 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 95.9 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.86 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 95.86 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.83 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 95.76 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 95.75 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.74 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.65 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 95.64 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 95.48 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 95.14 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 95.1 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 95.07 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.05 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 94.94 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 94.93 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 94.9 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 94.81 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 94.73 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.72 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 94.72 | |
| PLN00106 | 323 | malate dehydrogenase | 94.57 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 94.47 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 94.43 | |
| KOG1610|consensus | 322 | 94.31 | ||
| KOG1208|consensus | 314 | 93.73 | ||
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 93.64 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 93.6 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 93.49 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 93.4 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 93.36 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 93.08 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 92.74 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 92.7 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 92.65 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 92.59 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 92.5 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 92.34 | |
| KOG1203|consensus | 411 | 92.33 | ||
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 91.92 | |
| KOG1201|consensus | 300 | 90.89 | ||
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 90.7 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 90.64 | |
| KOG1611|consensus | 249 | 90.59 | ||
| KOG4288|consensus | 283 | 89.85 | ||
| PLN02214 | 342 | cinnamoyl-CoA reductase | 89.44 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 88.93 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 88.78 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 88.44 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 88.17 | |
| KOG1200|consensus | 256 | 88.02 | ||
| KOG4039|consensus | 238 | 87.91 | ||
| KOG1210|consensus | 331 | 87.71 | ||
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 87.43 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 87.2 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 87.11 | |
| KOG1204|consensus | 253 | 86.61 | ||
| KOG1430|consensus | 361 | 86.5 | ||
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 86.42 | |
| KOG0725|consensus | 270 | 86.26 | ||
| PRK05865 | 854 | hypothetical protein; Provisional | 85.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 84.89 | |
| KOG4169|consensus | 261 | 84.27 | ||
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 84.19 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 84.18 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 83.18 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 80.22 |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-72 Score=556.79 Aligned_cols=250 Identities=42% Similarity=0.806 Sum_probs=242.9
Q ss_pred CcccccCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHh
Q psy16526 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTA 80 (422)
Q Consensus 1 lv~~~~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~ 80 (422)
+|++++++||++|+|||||+|+++||+|||+||++||+|+++|+|+|++|++++|+++++|+||||||||++|+++|+++
T Consensus 218 ~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~ 297 (467)
T KOG1221|consen 218 VIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHA 297 (467)
T ss_pred HHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCCCCCccccCccccccCHHHHHHHHHHHhhhhHHHHHHHH
Q psy16526 81 VKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFS 160 (422)
Q Consensus 81 ~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~~d~~~ 160 (422)
.+. ..++++|||++||..||+||+++.+.+..++.++|+++.+|||.+.+++|.+.|.++.+++|++||+++|+++
T Consensus 298 ~~~----~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~ 373 (467)
T KOG1221|consen 298 GNS----KEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLEKMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLL 373 (467)
T ss_pred ccC----CCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcccceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHH
Confidence 763 1146899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCchHHHHHHHHHHHHHHhhhccccceEEEecccHHHHHHhcCccCCceeecccCCCCHHHHHHHHHHHHHHhHhcc
Q psy16526 161 LLTGKKPFMVRIQNKLDKAAKCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240 (422)
Q Consensus 161 ~l~g~kp~~~k~~~ki~~~~~~~~~F~~~~w~F~~~n~~~L~~~l~~~d~~~F~fD~~~idW~~Y~~~~~~Girkyllke 240 (422)
++.|+||++.|.|+|+++..++++||++++|+|+++|+++|+++|+++||++|+||++++||++|+.+|+.|+|+|++||
T Consensus 374 ~i~g~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~~~ldW~ey~~~~i~G~r~~llKe 453 (467)
T KOG1221|consen 374 RLLGKKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKRLFNFDMKQLDWEEYFNRHLLGLRKYLLKE 453 (467)
T ss_pred HHhCCChhhhHHHHHHHHHHHhhhhheeceEEecCccHHHHHHhCCHHHHhhcCCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHH
Q psy16526 241 QASSLPQARKRLYK 254 (422)
Q Consensus 241 ~~~~~~~a~~~~~~ 254 (422)
+++++|+||++++|
T Consensus 454 ~~e~l~~~r~~~kr 467 (467)
T KOG1221|consen 454 SPESLPQARKRLKR 467 (467)
T ss_pred ChhhhHHHHHhhcC
Confidence 99999999999875
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=442.86 Aligned_cols=231 Identities=26% Similarity=0.422 Sum_probs=207.6
Q ss_pred CcccccCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHh
Q psy16526 1 MLQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTA 80 (422)
Q Consensus 1 lv~~~~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~ 80 (422)
+|++++++||++|||||||++|++||+|||+||.++.+++++.+|+|++|+++||++.++|+||||+|||++|+++|...
T Consensus 360 lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~ 439 (605)
T PLN02503 360 VINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHG 439 (605)
T ss_pred HHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhh
Confidence 35677889999999999999999999999999965555555666899999999999999999999999999999976654
Q ss_pred hhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCCCCCccccCccccccCHHHHHHHHHHHhhhhHHHHHHHH
Q psy16526 81 VKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFS 160 (422)
Q Consensus 81 ~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~~d~~~ 160 (422)
.. ...+.+||||+||..||++|+++.+.+.+++.++|+.+..|+|. ..+.+++.+.+..++.|+ +.|.++
T Consensus 440 ~~-----~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~~~~~~~-~~~~~~~~~~~~~~~~h~----~~d~~~ 509 (605)
T PLN02503 440 GA-----AKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPI-HVPPMKLFSSMEDFSSHL----WRDALL 509 (605)
T ss_pred cc-----cCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcccccCcce-eccCceehhhHHHHHHHH----HHHHHH
Confidence 32 22468999999999999999999999999999999999999997 668899999999999996 688888
Q ss_pred HHc-----CCchHHHHHHHHHHH--------HHHhhhccccceEEEecccHHHHHHhcCccCCceeecccCCCCHHHHHH
Q psy16526 161 LLT-----GKKPFMVRIQNKLDK--------AAKCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIA 227 (422)
Q Consensus 161 ~l~-----g~kp~~~k~~~ki~~--------~~~~~~~F~~~~w~F~~~n~~~L~~~l~~~d~~~F~fD~~~idW~~Y~~ 227 (422)
++. |++|++.+.++|+++ ..++++||++++|.|+|+|+++|++.|+++||++|+||++.+||++|++
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~~F~~D~~~idW~~Y~~ 589 (605)
T PLN02503 510 RSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDVGSIDWRDYIT 589 (605)
T ss_pred HHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhhccCCCcCCCCHHHHHH
Confidence 775 488999888875544 8999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHhHhccC
Q psy16526 228 N-YVLGIRTFIFKEQ 241 (422)
Q Consensus 228 ~-~~~Girkyllke~ 241 (422)
+ |++|+|||++|+.
T Consensus 590 ~~~i~G~rky~lk~~ 604 (605)
T PLN02503 590 NVHIPGLRRHVMKGR 604 (605)
T ss_pred HhhhhHHHHHHhccC
Confidence 7 9999999999984
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-50 Score=413.29 Aligned_cols=232 Identities=24% Similarity=0.429 Sum_probs=217.4
Q ss_pred cccccCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhh
Q psy16526 2 LQNESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAV 81 (422)
Q Consensus 2 v~~~~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~ 81 (422)
+.+++++||++|+|||+|.|+.+||+|||+||++|+.+++.++++|.++.++||++.+.|+||||.|||++++++|+...
T Consensus 247 v~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~ 326 (491)
T PLN02996 247 LGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG 326 (491)
T ss_pred HHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc
Confidence 45567799999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred hhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCCCC----CccccCccccccCHHHHHHHHHHHhhhhHHHHH
Q psy16526 82 KYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNPLS----HITWYPDGQCRSNPISNAMCVFLLHRLPAHVLD 157 (422)
Q Consensus 82 ~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p~~----~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~~d 157 (422)
. ....+|||++||..||+||+++.+.+.+++.++|+. +++|+|.+.++++.+.|+++.+++|.+|++++|
T Consensus 327 ~------~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~ 400 (491)
T PLN02996 327 G------QGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQ 400 (491)
T ss_pred c------CCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHH
Confidence 1 124579999999999999999999999999999998 699999999999999999999999999999999
Q ss_pred HHHH--HcCCchHHHHHHHHH---HHHHHhhhccccceEEEecccHHHHHHhcCccC---CceeecccCCCCHHHHHHH-
Q psy16526 158 LFSL--LTGKKPFMVRIQNKL---DKAAKCLEYFSTQEWRFLDDNVRELNASLSLED---RRVFSFDVTEIDWPKYIAN- 228 (422)
Q Consensus 158 ~~~~--l~g~kp~~~k~~~ki---~~~~~~~~~F~~~~w~F~~~n~~~L~~~l~~~d---~~~F~fD~~~idW~~Y~~~- 228 (422)
++.. +.|+||++.|++||+ ++.+++++||++++|.|+++|+++|++.|+++| |++|+||++.+||++|+++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~ 480 (491)
T PLN02996 401 LVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480 (491)
T ss_pred HHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHh
Confidence 9988 678999999999999 666999999999999999999999999999955 9999999999999999999
Q ss_pred HHHHHHHhHhc
Q psy16526 229 YVLGIRTFIFK 239 (422)
Q Consensus 229 ~~~Girkyllk 239 (422)
|++|+|||++|
T Consensus 481 ~~~g~~~y~~k 491 (491)
T PLN02996 481 HIPGLVKYVLK 491 (491)
T ss_pred hHHHHHHHhcC
Confidence 99999999997
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=212.72 Aligned_cols=94 Identities=52% Similarity=0.902 Sum_probs=92.5
Q ss_pred HHhhhhHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhhccccceEEEecccHHHHHHhcCccCCceeecccCCCCHHHHH
Q psy16526 147 LLHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAAKCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYI 226 (422)
Q Consensus 147 ~~~~lPa~~~d~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~~w~F~~~n~~~L~~~l~~~d~~~F~fD~~~idW~~Y~ 226 (422)
|+|.+||+++|+++++.|+||+++|+++|++++.++++||++++|.|+|+|+++|++.|+++||+.|+||+++|||++|+
T Consensus 1 ~~h~lPA~~~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~ 80 (94)
T PF03015_consen 1 LFHFLPAYLLDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYF 80 (94)
T ss_pred CcchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhcc
Q psy16526 227 ANYVLGIRTFIFKE 240 (422)
Q Consensus 227 ~~~~~Girkyllke 240 (422)
.+|+.|+|||++||
T Consensus 81 ~~~~~G~rkyllke 94 (94)
T PF03015_consen 81 RNYIPGIRKYLLKE 94 (94)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999998
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-27 Score=189.13 Aligned_cols=91 Identities=47% Similarity=0.892 Sum_probs=89.5
Q ss_pred HhhhhHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhhccccceEEEecccHHHHHHhcCccCCceeecccCCCCHHHHHH
Q psy16526 148 LHRLPAHVLDLFSLLTGKKPFMVRIQNKLDKAAKCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIA 227 (422)
Q Consensus 148 ~~~lPa~~~d~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~~w~F~~~n~~~L~~~l~~~d~~~F~fD~~~idW~~Y~~ 227 (422)
.|.+||.++|.++.+.|+||+++++++|+.+++++++||++++|.|+++|+++|++.|+|+||+.|+||++++||++|++
T Consensus 2 ~~~lpa~~~d~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y~~ 81 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFE 81 (92)
T ss_pred cccchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHh
Q psy16526 228 NYVLGIRTFIF 238 (422)
Q Consensus 228 ~~~~Girkyll 238 (422)
+|++|+|+|++
T Consensus 82 ~~~~G~r~yll 92 (92)
T cd09071 82 NYIPGLRKYLL 92 (92)
T ss_pred HHHHHHHHHhC
Confidence 99999999985
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.4e-18 Score=159.26 Aligned_cols=117 Identities=28% Similarity=0.475 Sum_probs=82.4
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
..++++++.||++++++||++++++.+.+++|+||||||.+++..++++..++||.||++++++|.+.+ .++|+|+||+
T Consensus 58 ~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa 136 (249)
T PF07993_consen 58 ALSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTA 136 (249)
T ss_dssp HTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEG
T ss_pred hhccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccc
Confidence 368999999999999999999999999999999999999999999998889999999999999999765 5699999998
Q ss_pred ccccCCC-cc-------cccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDRE-EV-------REIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~~-~~-------~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+... .+ +|.....+....+.|..|||++|+++.+.
T Consensus 137 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a 182 (249)
T PF07993_consen 137 YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREA 182 (249)
T ss_dssp GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHH
T ss_pred cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHH
Confidence 7776533 22 22223344566679999999999999864
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-17 Score=155.76 Aligned_cols=123 Identities=20% Similarity=0.249 Sum_probs=98.5
Q ss_pred HHHHHHhhhhccccCcCc--EEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccChhhhHH---HHHHhhHHHHH
Q psy16526 289 IDLLFDQLRQERSNELAK--IKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKFDEALK---LSVTINMLGTK 361 (422)
Q Consensus 289 ~~~v~d~l~~~~~~~~~~--v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~~~~~~---~~~~~Nv~gt~ 361 (422)
..+++|++...+.....+ .++++||+.|..+ +++++ .++|.|||+||...+.+|.+ ++++.||.||.
T Consensus 26 ~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~------L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl 99 (329)
T COG1087 26 EVVVLDNLSNGHKIALLKLQFKFYEGDLLDRAL------LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTL 99 (329)
T ss_pred eEEEEecCCCCCHHHhhhccCceEEeccccHHH------HHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHH
Confidence 345677887777666666 6899999999743 34443 47899999999988776544 56999999999
Q ss_pred HHHHHHHhcCCCceEEEEeCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 362 RLVELCHEMTHLEALIHVSTAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 362 ~ll~~a~~~~~~~r~v~~SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+||++|++.+ +++|||.||+.+||. ..|++|+.+.. |.+.||.+|+|.|++++++.
T Consensus 100 ~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~---p~NPYG~sKlm~E~iL~d~~ 157 (329)
T COG1087 100 NLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLA---PINPYGRSKLMSEEILRDAA 157 (329)
T ss_pred HHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCC---CCCcchhHHHHHHHHHHHHH
Confidence 9999999998 999999999988887 45899965555 55567789999999998864
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.9e-16 Score=154.21 Aligned_cols=136 Identities=43% Similarity=0.750 Sum_probs=124.4
Q ss_pred HHHHHHHHhhhhccccCcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHH
Q psy16526 287 LFIDLLFDQLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 287 ~~~~~v~d~l~~~~~~~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.+...+|+.+++.++...+++..+.||++++++|++++|.+.+.+++|+|||+||.++|++.++.+..+|+.||++++++
T Consensus 61 ~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~l 140 (467)
T KOG1221|consen 61 ELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQL 140 (467)
T ss_pred HHhhhHHHHHHhhCccceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHH
Confidence 45568889999998889999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHhcCCCceEEEEeCCccccCCCcccccccCCCC--CHHHHHHHHhhCCHHHhhhcCC
Q psy16526 367 CHEMTHLEALIHVSTAYCNCDREEVREIIYSPPY--DPQKIIETMEWMDDSLVNTLTP 422 (422)
Q Consensus 367 a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~--~p~~~y~~~K~~~E~~~~~~~~ 422 (422)
|+++..++-++|+||+|++.....++|..++.+. ++.+..++..++.++++++++|
T Consensus 141 ak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~ 198 (467)
T KOG1221|consen 141 AKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAP 198 (467)
T ss_pred HHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhH
Confidence 9999889999999999999767788998888776 8999889999999999887754
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-15 Score=154.38 Aligned_cols=93 Identities=28% Similarity=0.527 Sum_probs=79.9
Q ss_pred cCcEEEEeCcCCCCCCCCCHHH-HHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 304 LAKIKPILGDITEPELGISQND-QKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~-~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.++++++.||++++++||++.+ ++.+.+++|+|||+||.+++..+++...++|+.||.+|+++|++++++++|||+||+
T Consensus 83 ~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~ 162 (491)
T PLN02996 83 SEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA 162 (491)
T ss_pred hcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence 3789999999999999998876 567788999999999999988788888999999999999999987558999999999
Q ss_pred ccccCCC-ccccccc
Q psy16526 383 YCNCDRE-EVREIIY 396 (422)
Q Consensus 383 ~~~g~~~-~~~E~~~ 396 (422)
+++|... .++|..+
T Consensus 163 ~vyG~~~~~i~E~~~ 177 (491)
T PLN02996 163 YVCGEKSGLILEKPF 177 (491)
T ss_pred EEecCCCceeeeecC
Confidence 9998643 3445433
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.5e-15 Score=154.57 Aligned_cols=94 Identities=30% Similarity=0.545 Sum_probs=85.5
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.||++++++||++++.+.+.+++|+|||+||.++++.+++...++|+.||.+++++|++++++++|||+||+|
T Consensus 191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred cccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 57899999999999999999999888889999999999999888888889999999999999999986688999999999
Q ss_pred cccCC-CcccccccC
Q psy16526 384 CNCDR-EEVREIIYS 397 (422)
Q Consensus 384 ~~g~~-~~~~E~~~~ 397 (422)
++|.. ..+.|+.++
T Consensus 271 VyG~~~G~i~E~~y~ 285 (605)
T PLN02503 271 VNGQRQGRIMEKPFR 285 (605)
T ss_pred eecCCCCeeeeeecC
Confidence 99986 477887664
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.4e-15 Score=141.73 Aligned_cols=106 Identities=24% Similarity=0.241 Sum_probs=86.2
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhh--hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE--ALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~--~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++.||++|+ +++.++++++|+|||+||.++... +.++.+++||.||+||+++|++.+ ++||||+||..+
T Consensus 47 ~~~~~~Di~d~------~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~v 119 (280)
T PF01073_consen 47 KEYIQGDITDP------ESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISV 119 (280)
T ss_pred eeEEEeccccH------HHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcce
Confidence 34999999998 467888999999999999887543 566789999999999999999986 999999999977
Q ss_pred ccC---CCc---ccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCD---REE---VREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~---~~~---~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+. ..+ .+|+. +.|..+.+.|+.+|.++|+++-+.
T Consensus 120 v~~~~~~~~~~~~dE~~-~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 120 VFDNYKGDPIINGDEDT-PYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred eEeccCCCCcccCCcCC-cccccccCchHHHHHHHHHHHHhh
Confidence 765 333 24443 345558889999999999987653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-14 Score=137.89 Aligned_cols=119 Identities=23% Similarity=0.281 Sum_probs=98.4
Q ss_pred cccCcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 300 RSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 300 ~~~~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+...++++++.||+.++++||++.+++.+.+++|.|||+||.+++-.++.+....||.||..++++|...+ .|.+.|+
T Consensus 55 ~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yV 133 (382)
T COG3320 55 DELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYV 133 (382)
T ss_pred hhhhcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEE
Confidence 345568999999999999999999999999999999999999999989999999999999999999999854 8899999
Q ss_pred eCCccccCCC----c--ccccc--cCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 380 STAYCNCDRE----E--VREII--YSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 380 SS~~~~g~~~----~--~~E~~--~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
||.++..... . .+|+. ...-..+-+.|+.|||.+|.++..
T Consensus 134 Ssisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~ 181 (382)
T COG3320 134 SSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE 181 (382)
T ss_pred eeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHH
Confidence 9987764421 1 11111 112335677899999999999864
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5e-14 Score=131.95 Aligned_cols=108 Identities=24% Similarity=0.260 Sum_probs=88.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhhh---HHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDEA---LKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
.++..|++||++|.+ .+.+++. ++|+|+|+||-.+++.+ +..+.++||.||.+|||++++....-||+|
T Consensus 50 ~~~~~fv~~DI~D~~------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~H 123 (340)
T COG1088 50 SPRYRFVQGDICDRE------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHH 123 (340)
T ss_pred CCCceEEeccccCHH------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEE
Confidence 468999999999974 3466665 69999999999988754 567799999999999999999863349999
Q ss_pred EeCCccccCCC----cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDRE----EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~~----~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||--|||+.. ..+| ..|++|.+.|+.||+.++.++.+|
T Consensus 124 ISTDEVYG~l~~~~~~FtE---~tp~~PsSPYSASKAasD~lVray 166 (340)
T COG1088 124 ISTDEVYGDLGLDDDAFTE---TTPYNPSSPYSASKAASDLLVRAY 166 (340)
T ss_pred eccccccccccCCCCCccc---CCCCCCCCCcchhhhhHHHHHHHH
Confidence 99999998732 3567 467777777788999999998876
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.3e-13 Score=143.52 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=73.7
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccC---hh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVK---FD---EALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
+.+..+|++|++ .+...+. ++|+||||||.++ .+ .++.+.+++|+.||.+|+++|++.+ ++ +++
T Consensus 407 v~~~~~~l~d~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~-~v~ 478 (668)
T PLN02260 407 YEYGKGRLEDRS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LL-MMN 478 (668)
T ss_pred EEeeccccccHH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-Ce-EEE
Confidence 334567887763 2333433 7899999999874 22 3556778999999999999999987 64 677
Q ss_pred EeCCccccC--------CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCD--------REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~--------~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||.++++. ..+++|+..+.| |.+.|+.+|+++|.++..+
T Consensus 479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~--~~~~Yg~sK~~~E~~~~~~ 526 (668)
T PLN02260 479 FATGCIFEYDAKHPEGSGIGFKEEDKPNF--TGSFYSKTKAMVEELLREY 526 (668)
T ss_pred EcccceecCCcccccccCCCCCcCCCCCC--CCChhhHHHHHHHHHHHhh
Confidence 788766542 135667543322 3467999999999998765
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.4e-13 Score=133.48 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=83.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
++++++.||++|. +.+..+++++|+|||+||..+.. .++.+..++|+.||.+|+++|++.+ +++|||+||
T Consensus 69 ~~~~~~~~Di~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS 141 (348)
T PRK15181 69 SRFIFIQGDIRKF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAAS 141 (348)
T ss_pred CceEEEEccCCCH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeec
Confidence 4688999999986 34567778999999999986543 3445668999999999999999986 899999999
Q ss_pred CccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+||. ..+..|+. |.+|.+.|+.+|.++|.+++.+
T Consensus 142 ~~vyg~~~~~~~~e~~---~~~p~~~Y~~sK~~~e~~~~~~ 179 (348)
T PRK15181 142 SSTYGDHPDLPKIEER---IGRPLSPYAVTKYVNELYADVF 179 (348)
T ss_pred hHhhCCCCCCCCCCCC---CCCCCChhhHHHHHHHHHHHHH
Confidence 988874 33455644 3345557889999999988754
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-11 Score=133.30 Aligned_cols=339 Identities=15% Similarity=0.142 Sum_probs=169.0
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccc---ccccc-ceeeEEeecCCcccccchhHHHHHHHHHHHHHHhh
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGII---AAAGK-GFFRTMLCHENKVADLVPVDIVINLMICAAWKTAV 81 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~---~~~g~-G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~ 81 (422)
..++|++|+||+.|.+... .|..+++.++..++ ...+. .....+.++.....++||||.|+++++.++-
T Consensus 165 ~~g~~~~ilRp~~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~---- 237 (657)
T PRK07201 165 ECGLPWRVYRPAVVVGDSR---TGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH---- 237 (657)
T ss_pred cCCCcEEEEcCCeeeecCC---CCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc----
Confidence 3579999999999999643 45666665543221 11111 1111234555667899999999999877652
Q ss_pred hhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCCCCCccccCccccccCHHHHHHHHHHHhhhhHHHHHHHHH
Q psy16526 82 KYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSL 161 (422)
Q Consensus 82 ~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~~d~~~~ 161 (422)
. ......+||++++ .|+||.++.+.+.+.....+.. .|. ..+|..+...++.
T Consensus 238 ~-----~~~~g~~~ni~~~--~~~s~~el~~~i~~~~g~~~~~----~~~-----------------~~~p~~~~~~~~~ 289 (657)
T PRK07201 238 K-----DGRDGQTFHLTDP--KPQRVGDIYNAFARAAGAPPDA----RLF-----------------GFLPGFVAAPLLA 289 (657)
T ss_pred C-----cCCCCCEEEeCCC--CCCcHHHHHHHHHHHhCCCccc----ccc-----------------ccCChHHHHHHhh
Confidence 1 1123469999986 6899999999998876542200 000 1122222222222
Q ss_pred HcCCchHHHHH-HHHHHHHHHhhhccccceEEEecccHHHHHHhcCccCCceeecccCCCCHHHHHHHHHHHHHHhHhcc
Q psy16526 162 LTGKKPFMVRI-QNKLDKAAKCLEYFSTQEWRFLDDNVRELNASLSLEDRRVFSFDVTEIDWPKYIANYVLGIRTFIFKE 240 (422)
Q Consensus 162 l~g~kp~~~k~-~~ki~~~~~~~~~F~~~~w~F~~~n~~~L~~~l~~~d~~~F~fD~~~idW~~Y~~~~~~Girkyllke 240 (422)
+.+.-..+.+. .++....-..+++ ....+.|+++++++.++....+.. ..++|+..++ .|-.+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~f~~~~~~~~L~~~~~~~p----------~~~~~~~~~~----~~~~~~ 354 (657)
T PRK07201 290 ALGPVRRLRNAVATQLGIPPEVLDF-VNYPTTFDSRETRAALKGSGIEVP----------RLASYAPRLW----DYWERH 354 (657)
T ss_pred hcchhhHHHHHHHHhcCCCHHHHHh-ccCCCeeccHHHHHHhccCCcCCC----------ChHHHHHHHH----HHHHhc
Confidence 11100001110 0111101123333 345788999999998876443322 2334443332 222111
Q ss_pred CCCChHHHHH----HHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh---hhhhHHHHHHHHHHhhhhccccCcCcEEEEeC
Q psy16526 241 QASSLPQARK----RLYKMLWIHRL-SKLLMILLVWRLLMLRSSV---ARSSWHLFIDLLFDQLRQERSNELAKIKPILG 312 (422)
Q Consensus 241 ~~~~~~~a~~----~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~d~l~~~~~~~~~~v~~v~g 312 (422)
-... ..+++ +++...++-.. ...+-..+.-.+.-.-.++ .|+-- -.. +...... ....++.++.+
T Consensus 355 ~~~~-~~~~~~~~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~-~~~----~~~~~~~-~~~~~~~~~~~ 427 (657)
T PRK07201 355 LDPD-RARRRDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGE-ALD----ELVAEIR-AKGGTAHAYTC 427 (657)
T ss_pred CChh-hhcccCcccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHH----HHHHHHH-hcCCcEEEEEe
Confidence 0000 00100 00000000000 0000011111111000000 01100 000 0011111 11246889999
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC---h------hhhHHHHHHhhHHHHHHHHHHHH----hcCC
Q psy16526 313 DITEPELGISQNDQKILK-------QNVSVVFHSAATVK---F------DEALKLSVTINMLGTKRLVELCH----EMTH 372 (422)
Q Consensus 313 Dl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~---~------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~ 372 (422)
|++|++ +.++++ .++|++||+||... . .+..+..+++|+.|+.++++++. +.+
T Consensus 428 Dv~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~- 500 (657)
T PRK07201 428 DLTDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR- 500 (657)
T ss_pred cCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-
Confidence 999874 233332 26899999999642 1 12345668999999998877764 333
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||..+++.. | ....|+.+|...|.+.+.+
T Consensus 501 ~g~iv~isS~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~l 536 (657)
T PRK07201 501 FGHVVNVSSIGVQTNA----------P--RFSAYVASKAALDAFSDVA 536 (657)
T ss_pred CCEEEEECChhhcCCC----------C--CcchHHHHHHHHHHHHHHH
Confidence 5789999998665321 1 2346788888887777654
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.7e-12 Score=123.46 Aligned_cols=102 Identities=16% Similarity=0.192 Sum_probs=78.5
Q ss_pred EEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 309 PILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+.||++|++ .+.++++ ++|+||||||..+.. .++...+++|+.||.+|+++|++.+ + +|||+||.+
T Consensus 35 ~~~~Dl~d~~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~ 106 (299)
T PRK09987 35 DYCGDFSNPE------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDY 106 (299)
T ss_pred cccCCCCCHH------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccce
Confidence 4568888863 4455555 589999999987654 2345567899999999999999987 4 799999999
Q ss_pred cccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 384 CNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 384 ~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+||.. .|.+|+.+ .+|.+.|+.+|+.+|+++..+.
T Consensus 107 Vy~~~~~~p~~E~~~---~~P~~~Yg~sK~~~E~~~~~~~ 143 (299)
T PRK09987 107 VFPGTGDIPWQETDA---TAPLNVYGETKLAGEKALQEHC 143 (299)
T ss_pred EECCCCCCCcCCCCC---CCCCCHHHHHHHHHHHHHHHhC
Confidence 98763 46788644 4455578899999999987653
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.3e-12 Score=118.54 Aligned_cols=100 Identities=23% Similarity=0.340 Sum_probs=80.1
Q ss_pred CcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcccc
Q psy16526 312 GDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNC 386 (422)
Q Consensus 312 gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g 386 (422)
.|++|++ ...++++ ++|+|||+||.+.++. .++.++.+|..|+.|+.++|++.| .++||+||-||+.
T Consensus 34 ~Ditd~~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFD 105 (281)
T COG1091 34 LDITDPD------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFD 105 (281)
T ss_pred ccccChH------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEec
Confidence 5777774 2345544 5799999999998773 456679999999999999999987 6899999999985
Q ss_pred C-C-CcccccccCCCCCHHHHHHHHhhCCHHHhhhcCC
Q psy16526 387 D-R-EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLTP 422 (422)
Q Consensus 387 ~-~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~~ 422 (422)
. . .+..|+ ++.+|.+.||.+|+++|..+.+..|
T Consensus 106 G~~~~~Y~E~---D~~~P~nvYG~sKl~GE~~v~~~~~ 140 (281)
T COG1091 106 GEKGGPYKET---DTPNPLNVYGRSKLAGEEAVRAAGP 140 (281)
T ss_pred CCCCCCCCCC---CCCCChhhhhHHHHHHHHHHHHhCC
Confidence 4 3 468884 5556667999999999999977643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=132.84 Aligned_cols=113 Identities=26% Similarity=0.360 Sum_probs=92.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.||++|++.++++++++.+ +++|+||||||..+...+..+..++|+.||.+++++|++.+ +++|||+||..+
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v 128 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAV 128 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEecccc
Confidence 5789999999999888887777776 89999999999887766667778999999999999999986 899999999988
Q ss_pred ccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+|.. .+.+|+..+.+.++.+.|+.+|+.+|+++.+
T Consensus 129 ~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~ 164 (657)
T PRK07201 129 AGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE 164 (657)
T ss_pred ccCccCccccccchhhcCCCCchHHHHHHHHHHHHH
Confidence 8753 3455554444444556799999999998864
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.3e-12 Score=120.05 Aligned_cols=108 Identities=20% Similarity=0.207 Sum_probs=87.9
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhhhH---HHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDEAL---KLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~~~---~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
.+++.++++|++|.. .++++.+ +.|.|+|+||...+.++. ..++..|+.||.+|||.+++.+ ++.+||
T Consensus 53 ~~~v~f~~~Dl~D~~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~ 125 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDAE------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVF 125 (343)
T ss_pred CCceEEEEeccCCHH------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEE
Confidence 478999999999974 3455543 679999999998766444 4568899999999999999998 999999
Q ss_pred EeCCccccCC--CcccccccCCCCC-HHHHHHHHhhCCHHHhhhcC
Q psy16526 379 VSTAYCNCDR--EEVREIIYSPPYD-PQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 379 ~SS~~~~g~~--~~~~E~~~~~p~~-p~~~y~~~K~~~E~~~~~~~ 421 (422)
+||+.+||.. .|++|+. |.+ |...|+.+|.+.|+++.++.
T Consensus 126 sssatvYG~p~~ip~te~~---~t~~p~~pyg~tK~~iE~i~~d~~ 168 (343)
T KOG1371|consen 126 SSSATVYGLPTKVPITEED---PTDQPTNPYGKTKKAIEEIIHDYN 168 (343)
T ss_pred ecceeeecCcceeeccCcC---CCCCCCCcchhhhHHHHHHHHhhh
Confidence 9999888874 5788854 444 66677889999999987763
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.8e-11 Score=119.88 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=82.1
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hhH-HHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EAL-KLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~~-~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
+++++.||++|++ ++..+++++|+|||+||..+.. .++ .+.+++|+.|+.+++++|++.+++++|||+||+.
T Consensus 60 ~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~ 133 (338)
T PLN00198 60 DLKIFGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA 133 (338)
T ss_pred ceEEEEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecce
Confidence 6889999999873 4566778899999999976533 233 3467899999999999998864489999999987
Q ss_pred cccCC------Cccccccc------CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR------EEVREIIY------SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~------~~~~E~~~------~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|.. .+++|+.. ..+..|.+.|+.+|.++|.++..+
T Consensus 134 ~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 182 (338)
T PLN00198 134 AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKF 182 (338)
T ss_pred eeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHH
Confidence 77632 24555421 123446677999999999988765
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-11 Score=120.59 Aligned_cols=115 Identities=26% Similarity=0.351 Sum_probs=92.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.||++++.++++++++..+.+++|+|||+||.+++..+.++..++|+.|+.+++++|++.+ +++|+|+||.++
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v 139 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISV 139 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccc
Confidence 5799999999999999998888888889999999999988776777778899999999999999976 788999999987
Q ss_pred ccCC--Cccccccc--CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCDR--EEVREIIY--SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~~--~~~~E~~~--~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.. .+..|+.. ..+..+.+.|+.+|+++|.++...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 179 (367)
T TIGR01746 140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREA 179 (367)
T ss_pred cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHH
Confidence 7652 22233322 122334567999999999988754
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-11 Score=121.43 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=80.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCC---ceE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHL---EAL 376 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~r~ 376 (422)
.+++++.||++|++ .+..+++ ++|+|||+||..+.. .......++|+.||.+++++|++.+ + ++|
T Consensus 55 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~ 127 (343)
T TIGR01472 55 ARMKLHYGDLTDSS------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKF 127 (343)
T ss_pred cceeEEEeccCCHH------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeE
Confidence 46889999999873 4456655 469999999986543 2234557889999999999999875 4 389
Q ss_pred EEEeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+||+.+||.. .+.+|+. |..|.+.|+.+|..+|.++..+
T Consensus 128 v~~SS~~vyg~~~~~~~~E~~---~~~p~~~Y~~sK~~~e~~~~~~ 170 (343)
T TIGR01472 128 YQASTSELYGKVQEIPQNETT---PFYPRSPYAAAKLYAHWITVNY 170 (343)
T ss_pred EEeccHHhhCCCCCCCCCCCC---CCCCCChhHHHHHHHHHHHHHH
Confidence 999999888753 3567754 4556667889999999998665
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.1e-11 Score=118.41 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=83.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC-c
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA-Y 383 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~-~ 383 (422)
++++++.+|++|++ ++..+++++|+|||+||... .++.+.+++|+.||.+++++|++.+ +++|||+||. .
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~a 130 (342)
T PLN02214 60 ERLILCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGA 130 (342)
T ss_pred CcEEEEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEecccee
Confidence 46889999999873 45777889999999999753 3456678999999999999999976 8999999996 4
Q ss_pred cccCC-----CcccccccC---CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR-----EEVREIIYS---PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~-----~~~~E~~~~---~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||.. .+++|+... .|.+|.+.|+.+|.++|+++..+
T Consensus 131 vyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~ 175 (342)
T PLN02214 131 VYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWET 175 (342)
T ss_pred eeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHH
Confidence 66531 136776421 24456778999999999998765
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.4e-11 Score=118.31 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=82.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|+++.. +.+..+++++|+|||+||..... .++...+++|+.||.+++++|++.+ ++|||+||
T Consensus 46 ~~~~~~~~Dl~~~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS 118 (347)
T PRK11908 46 PRMHFFEGDITINK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 118 (347)
T ss_pred CCeEEEeCCCCCCH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEec
Confidence 46899999998431 23456677999999999975432 3455678999999999999999875 69999999
Q ss_pred CccccCC--CcccccccC---CC-CCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYS---PP-YDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~---~p-~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+||.. .+..|+..+ .| ..|.+.|+.+|.++|+++..+
T Consensus 119 ~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~ 163 (347)
T PRK11908 119 SEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAY 163 (347)
T ss_pred ceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHH
Confidence 9888753 345555422 13 256778999999999998765
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-11 Score=119.85 Aligned_cols=108 Identities=26% Similarity=0.335 Sum_probs=85.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccC--hhh-hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVK--FDE-ALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~--~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
..+++++.||+++.. ++...++++ .|+||||... +.. +.+..+++||.||.+++++|++.+ ++++||+|
T Consensus 54 ~~~v~~~~~D~~~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtS 125 (361)
T KOG1430|consen 54 SGRVTVILGDLLDAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTS 125 (361)
T ss_pred CCceeEEecchhhhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEec
Confidence 567899999999974 457778889 8888887653 223 466779999999999999999998 99999999
Q ss_pred CCccccCCCc--ccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 381 TAYCNCDREE--VREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 381 S~~~~g~~~~--~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
|.+|.....+ ..++..+.|..+.+.|+.+|..+|.++..
T Consensus 126 s~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~ 166 (361)
T KOG1430|consen 126 SAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLE 166 (361)
T ss_pred CceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHH
Confidence 9988766443 22333355688889999999999998754
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.8e-11 Score=115.58 Aligned_cols=93 Identities=24% Similarity=0.422 Sum_probs=67.5
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
+..+.||++|+ +.+..+++ ++|+|||+||.-+++ .++.++.++||.||+|++++|.+++ +++||++||
T Consensus 56 ~~~vigDvrd~------~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IST 128 (293)
T PF02719_consen 56 IVPVIGDVRDK------ERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIST 128 (293)
T ss_dssp EE--CTSCCHH------HHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEE
T ss_pred cCceeecccCH------HHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccc
Confidence 34568999987 34567777 899999999998865 4677889999999999999999987 999999999
Q ss_pred CccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 382 AYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 382 ~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
-- ..+|-++||.+|.++|.++.++.
T Consensus 129 DK---------------Av~PtnvmGatKrlaE~l~~~~~ 153 (293)
T PF02719_consen 129 DK---------------AVNPTNVMGATKRLAEKLVQAAN 153 (293)
T ss_dssp CG---------------CSS--SHHHHHHHHHHHHHHHHC
T ss_pred cc---------------cCCCCcHHHHHHHHHHHHHHHHh
Confidence 42 33456699999999999988753
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.4e-11 Score=122.14 Aligned_cols=109 Identities=15% Similarity=0.087 Sum_probs=80.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh---h---HHHHHHhhHHHHHHHHHHHHhcCCCc-e
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE---A---LKLSVTINMLGTKRLVELCHEMTHLE-A 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~---~---~~~~~~~Nv~gt~~ll~~a~~~~~~~-r 375 (422)
.+++++.||++|++ .+..+++ ++|+|||+||..+... + ....+++|+.||.+++++|++.+ ++ +
T Consensus 113 ~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~ 185 (442)
T PLN02572 113 KEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCH 185 (442)
T ss_pred CcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCcc
Confidence 35889999999873 4455555 5899999998754321 1 23346899999999999999987 65 8
Q ss_pred EEEEeCCccccCC-Cccccc-----------ccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDR-EEVREI-----------IYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~-~~~~E~-----------~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|||+||..+||.. .+++|. ..+.|.+|.+.|+.+|.++|.++..+
T Consensus 186 ~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~ 242 (442)
T PLN02572 186 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 242 (442)
T ss_pred EEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHH
Confidence 9999999888752 233332 22246677778999999999998765
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.1e-11 Score=116.60 Aligned_cols=110 Identities=17% Similarity=0.276 Sum_probs=81.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh--hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD--EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++++.+|+++++ .+..+++++|+|||+||..... .+..+.+++|+.||.+++++|++..+++||||+||.
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~ 129 (322)
T PLN02986 56 ERLKLFKADLLEES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSST 129 (322)
T ss_pred CceEEEecCCCCcc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecch
Confidence 47899999999874 4577778999999999976432 233346889999999999999986448999999997
Q ss_pred cc--ccC-----CCcccccccCCCC---CHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YC--NCD-----REEVREIIYSPPY---DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~--~g~-----~~~~~E~~~~~p~---~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ++. ..+++|+....|. .+...|+.+|.++|.++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~ 177 (322)
T PLN02986 130 AAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEF 177 (322)
T ss_pred hheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHH
Confidence 43 332 1236665543332 34567999999999888765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.8e-11 Score=115.16 Aligned_cols=107 Identities=17% Similarity=0.211 Sum_probs=82.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCc-cEEEEcccccChhhh----HHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNV-SVVFHSAATVKFDEA----LKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~-d~ViH~Aa~~~~~~~----~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|+++.+ .......++ |+|||+||....... +.+.+++|+.||.+++++|++.+ +++|||+
T Consensus 42 ~~~~~~~~d~~~~~------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ 114 (314)
T COG0451 42 SGVEFVVLDLTDRD------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFA 114 (314)
T ss_pred cccceeeecccchH------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEe
Confidence 35788999998873 235566677 999999999875543 33578999999999999999965 9999998
Q ss_pred eCCccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.++++.. .+++|+. .|..|.+.|+.+|+.+|+.+..+
T Consensus 115 ss~~~~~~~~~~~~~~E~~--~~~~p~~~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 115 SSVSVVYGDPPPLPIDEDL--GPPRPLNPYGVSKLAAEQLLRAY 156 (314)
T ss_pred CCCceECCCCCCCCccccc--CCCCCCCHHHHHHHHHHHHHHHH
Confidence 887666542 3577764 45555559999999999998765
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.8e-11 Score=118.96 Aligned_cols=108 Identities=14% Similarity=0.049 Sum_probs=79.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.||++|+ +.+..+++++|+||||||..... .++.+.+..|+.||.+++++|++.+ ++|||+||
T Consensus 65 ~~~~~~~~Dl~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS 136 (386)
T PLN02427 65 GRIQFHRINIKHD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 136 (386)
T ss_pred CCeEEEEcCCCCh------HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence 4799999999987 34577788999999999976532 2334456789999999999999864 79999999
Q ss_pred CccccCC--CcccccccCC------------------C-CCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYSP------------------P-YDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~~------------------p-~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++||.. ..++|+.+.. | .+|.+.|+.+|+++|+++..+
T Consensus 137 ~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 196 (386)
T PLN02427 137 CEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAE 196 (386)
T ss_pred eeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHH
Confidence 9888752 2223322110 1 134567999999999998764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.16 E-value=9e-11 Score=116.88 Aligned_cols=110 Identities=11% Similarity=0.105 Sum_probs=81.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh--hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD--EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++++.||+++++ .+..+++++|+|||+||..+.. .+..+.+++|+.||.+++++|++.+.+++|||+||.
T Consensus 56 ~~~~~v~~Dl~d~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~ 129 (351)
T PLN02650 56 TRLTLWKADLAVEG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSA 129 (351)
T ss_pred CceEEEEecCCChh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecch
Confidence 36889999999874 3567778999999999976533 223456899999999999999987557899999998
Q ss_pred ccccCC---Cc-ccccccC------CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDR---EE-VREIIYS------PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~---~~-~~E~~~~------~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++.. .+ .+|+... .+..|.+.|+.+|.++|.++..+
T Consensus 130 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (351)
T PLN02650 130 GTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY 177 (351)
T ss_pred hhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHH
Confidence 655432 22 4554321 12234568999999999988765
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=8e-11 Score=126.88 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=84.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
++++++.||++|+. ..++.+++++|+|||+||..+.. .++.+.+++|+.||.+++++|++.+ ++|||+||
T Consensus 360 ~~~~~~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS 432 (660)
T PRK08125 360 PRFHFVEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPST 432 (660)
T ss_pred CceEEEeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcc
Confidence 46899999999863 12355667999999999976532 3455678999999999999999975 79999999
Q ss_pred CccccC--CCcccccccC---CCC-CHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCD--REEVREIIYS---PPY-DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~--~~~~~E~~~~---~p~-~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++||. ..+.+|+... .|. .|.+.|+.+|+++|+++..+
T Consensus 433 ~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~ 477 (660)
T PRK08125 433 SEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY 477 (660)
T ss_pred hhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHH
Confidence 988875 3457776543 233 35678999999999999765
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.7e-11 Score=113.36 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=85.6
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhh--HHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEA--LKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
..++++.+.+||.|++ .+..++++||.|||+|+++.++.. ..+..+.+|.||.|+|++|++...|+|+||+|
T Consensus 55 a~~~l~l~~aDL~d~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TS 128 (327)
T KOG1502|consen 55 AKERLKLFKADLLDEG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTS 128 (327)
T ss_pred CcccceEEeccccccc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEec
Confidence 3467999999999985 568889999999999999987633 44789999999999999999987799999999
Q ss_pred CCccc-cC------CCcccccccCCCC---CHHHHHHHHhhCCHHHhh
Q psy16526 381 TAYCN-CD------REEVREIIYSPPY---DPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 381 S~~~~-g~------~~~~~E~~~~~p~---~p~~~y~~~K~~~E~~~~ 418 (422)
|..+. .. ...++|+...++. .-...|..+|.++|+..=
T Consensus 129 S~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw 176 (327)
T KOG1502|consen 129 STAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAW 176 (327)
T ss_pred cHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHH
Confidence 97433 22 2356776543321 234679999999998643
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=114.55 Aligned_cols=110 Identities=13% Similarity=0.175 Sum_probs=81.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hhH-HHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EAL-KLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~~-~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
++++++.||+++++ .+..+++++|+|||+||..... ..+ .+.+++|+.||.+++++|++..++++|||+||+
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~ 128 (322)
T PLN02662 55 ERLHLFKANLLEEG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM 128 (322)
T ss_pred CceEEEeccccCcc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCH
Confidence 57899999999974 4567788999999999976432 233 367899999999999999987338999999996
Q ss_pred c--cccCC-----CcccccccCCCC---CHHHHHHHHhhCCHHHhhhc
Q psy16526 383 Y--CNCDR-----EEVREIIYSPPY---DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~--~~g~~-----~~~~E~~~~~p~---~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +++.. .+++|+.+..|. +..+.|+.+|.++|+++..+
T Consensus 129 ~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~ 176 (322)
T PLN02662 129 AAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKF 176 (322)
T ss_pred HHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHH
Confidence 4 45431 246775443332 12357999999999988654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=116.39 Aligned_cols=109 Identities=15% Similarity=0.237 Sum_probs=80.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-----hhHHH-----HHHhhHHHHHHHHHHHHhcCCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-----EALKL-----SVTINMLGTKRLVELCHEMTHLE 374 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-----~~~~~-----~~~~Nv~gt~~ll~~a~~~~~~~ 374 (422)
.+++++.+|++++ +++..++.++|+|||+||..+.. .++.. .+++|+.||.+++++|++.++++
T Consensus 58 ~~~~~~~~Dl~~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~ 131 (353)
T PLN02896 58 DRLRLFRADLQEE------GSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVK 131 (353)
T ss_pred CeEEEEECCCCCH------HHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCcc
Confidence 5688999999987 34567778899999999986532 13333 34556799999999998875478
Q ss_pred eEEEEeCCccccCC-------CcccccccCCCC-------CHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDR-------EEVREIIYSPPY-------DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~-------~~~~E~~~~~p~-------~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|||+||..++|.. .+++|+. +.|. .|...|+.+|+++|+++..+
T Consensus 132 ~~v~~SS~~vyg~~~~~~~~~~~~~E~~-~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 190 (353)
T PLN02896 132 RVVFTSSISTLTAKDSNGRWRAVVDETC-QTPIDHVWNTKASGWVYVLSKLLTEEAAFKY 190 (353)
T ss_pred EEEEEechhhccccccCCCCCCccCccc-CCcHHHhhccCCCCccHHHHHHHHHHHHHHH
Confidence 99999998777631 2456652 2222 24457999999999998765
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.2e-10 Score=118.34 Aligned_cols=95 Identities=19% Similarity=0.346 Sum_probs=81.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
..++.++.||+.|.+ .+..++++ +|+|||+||.-+++ .++.+..++||.||+|++++|.+++ +++||.
T Consensus 301 ~~~~~~~igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~ 373 (588)
T COG1086 301 ELKLRFYIGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVL 373 (588)
T ss_pred CcceEEEecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEE
Confidence 467889999999983 45777777 99999999998865 5778899999999999999999998 999999
Q ss_pred EeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||- ...+|-+++|.+|.++|.++.++
T Consensus 374 iSTD---------------KAV~PtNvmGaTKr~aE~~~~a~ 400 (588)
T COG1086 374 ISTD---------------KAVNPTNVMGATKRLAEKLFQAA 400 (588)
T ss_pred EecC---------------cccCCchHhhHHHHHHHHHHHHH
Confidence 9994 23445668999999999998765
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-10 Score=119.50 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=81.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|+.++. +.++|+||||||..+.. .++.+.+++|+.||.+|+++|++.+ + +|||+||
T Consensus 168 ~~~~~~~~Di~~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS 234 (436)
T PLN02166 168 PRFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTST 234 (436)
T ss_pred CceEEEECcccccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECc
Confidence 46789999997752 24799999999976532 3456678999999999999999976 4 8999999
Q ss_pred CccccCC--Cccccccc--CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIY--SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~--~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++||.. .+.+|+.. ..|..|.+.|+.+|+.+|+++..+
T Consensus 235 ~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y 277 (436)
T PLN02166 235 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDY 277 (436)
T ss_pred HHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence 9888753 35667542 247777788999999999998765
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.3e-10 Score=115.75 Aligned_cols=107 Identities=21% Similarity=0.199 Sum_probs=80.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhc--------C
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEM--------T 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~ 371 (422)
.+++++.+|++|++ ++..++. ++|+|||+||.++.. .++++.+++|+.||.+++++|++. +
T Consensus 50 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~ 123 (352)
T PRK10084 50 ERYVFEHADICDRA------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKK 123 (352)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccc
Confidence 45788999999873 4455554 589999999986532 335677999999999999999874 2
Q ss_pred CCceEEEEeCCccccCC------------CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDR------------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~------------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++++|||+||.+++|.. .+++|+ .|.+|.+.|+.+|..+|+++..+
T Consensus 124 ~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~---~~~~p~~~Y~~sK~~~E~~~~~~ 181 (352)
T PRK10084 124 NAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET---TAYAPSSPYSASKASSDHLVRAW 181 (352)
T ss_pred cceeEEEecchhhcCCCCccccccccccCCCcccc---CCCCCCChhHHHHHHHHHHHHHH
Confidence 36799999998777742 124553 35566778999999999988754
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-10 Score=113.01 Aligned_cols=110 Identities=14% Similarity=0.244 Sum_probs=82.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|+++++ +++.+++++|+|||+||..... .++.+.+++|+.||.+++++|++..++++||++||
T Consensus 56 ~~~~~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS 129 (325)
T PLN02989 56 ERLKLFKADLLDEG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSS 129 (325)
T ss_pred CceEEEeCCCCCch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 46889999999974 4567778899999999975432 23456789999999999999988533789999999
Q ss_pred CccccC-------CCcccccccCCCC---CHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCD-------REEVREIIYSPPY---DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~-------~~~~~E~~~~~p~---~p~~~y~~~K~~~E~~~~~~ 420 (422)
..+++. ..+++|+.+..|. .+.+.|+.+|..+|+++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~ 178 (325)
T PLN02989 130 MAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRF 178 (325)
T ss_pred hhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHH
Confidence 865532 1246776544443 23467999999999998754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-10 Score=114.55 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=81.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCc-----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLE----- 374 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~----- 374 (422)
.+++++.+|++|.+ ++..+++ ++|+|||+||..+.. ..+...+++|+.||.+++++|++.+ ++
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~ 132 (340)
T PLN02653 60 ARMKLHYGDLSDAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQI 132 (340)
T ss_pred CceEEEEecCCCHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccce
Confidence 45889999999873 3455554 479999999986543 2344557899999999999999876 54
Q ss_pred eEEEEeCCccccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|||+||+.+||.. .+++|+. |..|.+.|+.+|.++|.++..+
T Consensus 133 ~~v~~Ss~~vyg~~~~~~~E~~---~~~p~~~Y~~sK~~~e~~~~~~ 176 (340)
T PLN02653 133 KYYQAGSSEMYGSTPPPQSETT---PFHPRSPYAVAKVAAHWYTVNY 176 (340)
T ss_pred eEEEeccHHHhCCCCCCCCCCC---CCCCCChhHHHHHHHHHHHHHH
Confidence 89999999888763 3567753 5566678999999999988765
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.4e-10 Score=112.68 Aligned_cols=103 Identities=12% Similarity=0.065 Sum_probs=77.2
Q ss_pred eCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 311 LGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+|++++ ++++.+++ ++|+||||||..+. ..++.+.++.|+.||.+|+++|++.+ +++|||+||.++
T Consensus 32 ~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~v 104 (306)
T PLN02725 32 ELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCI 104 (306)
T ss_pred cCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceee
Confidence 5788776 34555544 57999999997542 13445678999999999999999986 899999999988
Q ss_pred ccC--CCcccccccC-CCCCHHH-HHHHHhhCCHHHhhhc
Q psy16526 385 NCD--REEVREIIYS-PPYDPQK-IIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~--~~~~~E~~~~-~p~~p~~-~y~~~K~~~E~~~~~~ 420 (422)
||. ..+++|+... .|.+|.+ .|+.+|.++|++++.+
T Consensus 105 yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~ 144 (306)
T PLN02725 105 YPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAY 144 (306)
T ss_pred cCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence 875 3467886532 2444533 5999999999887654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-10 Score=113.90 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=80.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhc--------C
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEM--------T 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~ 371 (422)
.+++++.+|++|++ +++.+++ ++|+|||+||..+.. ..+++.+++|+.||.+++++|++. .
T Consensus 51 ~~~~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~ 124 (355)
T PRK10217 51 ERFAFEKVDICDRA------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKK 124 (355)
T ss_pred CceEEEECCCcChH------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhccccccc
Confidence 35788999999873 4455555 489999999987543 245667899999999999999863 2
Q ss_pred CCceEEEEeCCccccC----CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCD----REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~----~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++++|||+||..+||. ..+++|+. |..|.+.|+.+|.++|.++..+
T Consensus 125 ~~~~~i~~SS~~vyg~~~~~~~~~~E~~---~~~p~s~Y~~sK~~~e~~~~~~ 174 (355)
T PRK10217 125 SAFRFHHISTDEVYGDLHSTDDFFTETT---PYAPSSPYSASKASSDHLVRAW 174 (355)
T ss_pred CceEEEEecchhhcCCCCCCCCCcCCCC---CCCCCChhHHHHHHHHHHHHHH
Confidence 3689999999877764 23577754 4444557888999999888764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.1e-10 Score=117.67 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=80.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|+.++. +.++|+||||||..+.. .++.+.+++|+.||.+|+++|++.+ + +|||+||
T Consensus 167 ~~~~~i~~D~~~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS 233 (442)
T PLN02206 167 PNFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTST 233 (442)
T ss_pred CceEEEECCccChh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECC
Confidence 46788999997652 24799999999976532 3456678999999999999999987 4 8999999
Q ss_pred CccccCC--Cccccccc--CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIY--SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~--~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++||.. .+.+|+.. .+|.++.+.|+.+|.++|+++..+
T Consensus 234 ~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y 276 (442)
T PLN02206 234 SEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDY 276 (442)
T ss_pred hHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 9888753 35666542 356777788999999999988754
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.9e-10 Score=111.50 Aligned_cols=93 Identities=26% Similarity=0.282 Sum_probs=62.7
Q ss_pred HHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccCC--Cccccccc
Q psy16526 324 NDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDR--EEVREIIY 396 (422)
Q Consensus 324 ~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~~--~~~~E~~~ 396 (422)
+.+...+. ++|+||||||.++.. .+++.++++|+.++.+|.++|++.+ .++||+||.+|+++. .+.+|+.
T Consensus 41 ~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~y~E~d- 117 (286)
T PF04321_consen 41 EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGPYTEDD- 117 (286)
T ss_dssp HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB-TTS-
T ss_pred HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcccccccCC-
Confidence 34455543 589999999998765 4566789999999999999999976 599999999998653 4578854
Q ss_pred CCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 397 SPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 397 ~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+.+|.+.||.+|..+|+.+.+..
T Consensus 118 --~~~P~~~YG~~K~~~E~~v~~~~ 140 (286)
T PF04321_consen 118 --PPNPLNVYGRSKLEGEQAVRAAC 140 (286)
T ss_dssp ------SSHHHHHHHHHHHHHHHH-
T ss_pred --CCCCCCHHHHHHHHHHHHHHHhc
Confidence 44566789999999999987643
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-10 Score=114.13 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=79.8
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++.+|+++. +.+..+..++|+|||+||..+. ..+.....+.|+.||.+|+++|++.+ +++|||+||.
T Consensus 66 ~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~ 138 (370)
T PLN02695 66 HEFHLVDLRVM------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSA 138 (370)
T ss_pred ceEEECCCCCH------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCch
Confidence 57888999886 3445666789999999987631 12333457789999999999999876 8999999999
Q ss_pred ccccCCC------cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDRE------EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~~------~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+||... +..|+. +.|.+|.+.|+.+|..+|+++..+
T Consensus 139 ~vYg~~~~~~~~~~~~E~~-~~p~~p~s~Yg~sK~~~E~~~~~~ 181 (370)
T PLN02695 139 CIYPEFKQLETNVSLKESD-AWPAEPQDAYGLEKLATEELCKHY 181 (370)
T ss_pred hhcCCccccCcCCCcCccc-CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 8887532 244432 126677778999999999988654
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.8e-10 Score=110.67 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=87.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
+++++.+|++++ +++.++++++|+|||+|+.... ..++.+.+++|+.|+.+++++|++.+ ++++|++||.++
T Consensus 44 ~~~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~ 116 (328)
T TIGR03466 44 DVEIVEGDLRDP------ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVAT 116 (328)
T ss_pred CceEEEeeCCCH------HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhh
Confidence 678999999987 3567778899999999987543 23456678999999999999999876 899999999988
Q ss_pred ccC---CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCD---REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~---~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|. ..+.+|+.+..|.++.+.|+.+|.+.|++++.+
T Consensus 117 ~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 117 LGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred cCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence 774 246778765556556678999999999998765
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.3e-10 Score=122.42 Aligned_cols=107 Identities=23% Similarity=0.287 Sum_probs=81.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH--hcCccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL--KQNVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~--~~~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.||++|++ .+..+ ..++|+||||||..+... +..+.+++|+.||.+++++|++.+.+++|||+
T Consensus 57 ~~v~~~~~Dl~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~ 130 (668)
T PLN02260 57 PNFKFVKGDIASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
T ss_pred CCeEEEECCCCChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 57899999999974 22333 258999999999876542 34467899999999999999997658999999
Q ss_pred eCCccccCCCc-----ccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDREE-----VREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~~~-----~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+.+||.... .+|+ .|..|.+.|+.+|..+|+++..+
T Consensus 131 SS~~vyg~~~~~~~~~~~E~---~~~~p~~~Y~~sK~~aE~~v~~~ 173 (668)
T PLN02260 131 STDEVYGETDEDADVGNHEA---SQLLPTNPYSATKAGAEMLVMAY 173 (668)
T ss_pred cchHHhCCCccccccCcccc---CCCCCCCCcHHHHHHHHHHHHHH
Confidence 99988876321 2343 34445567889999999988754
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.1e-10 Score=131.16 Aligned_cols=116 Identities=19% Similarity=0.300 Sum_probs=93.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.||++++.++|+++.+..+..++|+|||+||.+++..+.....+.|+.||.+++++|++.+ +++|+|+||..
T Consensus 1033 ~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~ 1111 (1389)
T TIGR03443 1033 ASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTS 1111 (1389)
T ss_pred hcceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCee
Confidence 35799999999999999999988888889999999999998777777767789999999999999875 89999999987
Q ss_pred cccCC--------------Cccccccc--CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR--------------EEVREIIY--SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~--------------~~~~E~~~--~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.. ..+.|+.. ..+..+.+.|+.+|+++|.++..+
T Consensus 1112 v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~ 1164 (1389)
T TIGR03443 1112 ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA 1164 (1389)
T ss_pred ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHH
Confidence 77531 12333321 123344567999999999998764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.8e-10 Score=105.20 Aligned_cols=105 Identities=23% Similarity=0.301 Sum_probs=83.4
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
+++++.+|+.|. +.++.++++ +|+|||+||..... ....+.++.|+.++.+++++|++.+ ++++||+|
T Consensus 43 ~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~s 115 (236)
T PF01370_consen 43 NVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLS 115 (236)
T ss_dssp TEEEEESETTSH------HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEE
T ss_pred eEEEEEeecccc------ccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc-cccccccc
Confidence 789999999976 355666654 59999999986422 3445678899999999999999987 79999999
Q ss_pred CCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|..+|+.. .+++|+.+. .|.+.|+.+|...|+++..+
T Consensus 116 S~~~y~~~~~~~~~e~~~~---~~~~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 116 SASVYGDPDGEPIDEDSPI---NPLSPYGASKRAAEELLRDY 154 (236)
T ss_dssp EGGGGTSSSSSSBETTSGC---CHSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccc---cccccccccccccccccccc
Confidence 99888764 467785444 55666889999999998765
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.6e-11 Score=109.56 Aligned_cols=112 Identities=22% Similarity=0.237 Sum_probs=84.8
Q ss_pred cCcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhH---HHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 302 NELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEAL---KLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 302 ~~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~---~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
...++.+++.+|+.+..+. ...-..+.+|.|+|.||..+++.+. -++...|+.+|.+|+++++..|++++|||
T Consensus 54 ~n~p~ykfv~~di~~~~~~----~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvh 129 (331)
T KOG0747|consen 54 RNSPNYKFVEGDIADADLV----LYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVH 129 (331)
T ss_pred ccCCCceEeeccccchHHH----HhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEE
Confidence 3457889999999987421 1122235789999999999877543 34577899999999999999988999999
Q ss_pred EeCCccccCCC--cc-cccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDRE--EV-REIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~~--~~-~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||-.|||+.. .. .|...+.|.+ .|+.+|+++|..+.+|
T Consensus 130 vSTdeVYGds~~~~~~~E~s~~nPtn---pyAasKaAaE~~v~Sy 171 (331)
T KOG0747|consen 130 VSTDEVYGDSDEDAVVGEASLLNPTN---PYAASKAAAEMLVRSY 171 (331)
T ss_pred ecccceecCccccccccccccCCCCC---chHHHHHHHHHHHHHH
Confidence 99998888732 22 2644455555 5667889999988876
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.6e-10 Score=110.97 Aligned_cols=106 Identities=15% Similarity=0.136 Sum_probs=82.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|+++++ ++..+++ ++|+|||+||..... ..+...+++|+.|+.+++++|++.+ +++|||+
T Consensus 58 ~~~~~~~~D~~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ 130 (352)
T PLN02240 58 DNLVFHKVDLRDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFS 130 (352)
T ss_pred ccceEEecCcCCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 46789999999873 4445443 689999999975432 3455678999999999999999876 8899999
Q ss_pred eCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+.+||. ..+++|+. |.+|.+.|+.+|...|+++..+
T Consensus 131 Ss~~vyg~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 170 (352)
T PLN02240 131 SSATVYGQPEEVPCTEEF---PLSATNPYGRTKLFIEEICRDI 170 (352)
T ss_pred ccHHHhCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHH
Confidence 99877764 34677854 5556668899999999988754
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.03 E-value=9e-10 Score=107.39 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=70.5
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccCh------hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKF------DEALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
+....+|+++.+ .+...+. ++|+||||||.++. ..++.+.+++|+.||.+|+++|++.+ ++ +++
T Consensus 36 V~~~~~~~~~~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~ 107 (298)
T PLN02778 36 FHYGSGRLENRA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTN 107 (298)
T ss_pred EEEecCccCCHH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEE
Confidence 444556776642 2233333 78999999998742 13456778999999999999999986 76 455
Q ss_pred EeCCcccc--CC------CcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 379 VSTAYCNC--DR------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 379 ~SS~~~~g--~~------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+||.++++ .. .+++|+.. |..|.+.|+.+|+++|.++..+.
T Consensus 108 ~sS~~vy~~~~~~p~~~~~~~~Ee~~--p~~~~s~Yg~sK~~~E~~~~~y~ 156 (298)
T PLN02778 108 YATGCIFEYDDAHPLGSGIGFKEEDT--PNFTGSFYSKTKAMVEELLKNYE 156 (298)
T ss_pred EecceEeCCCCCCCcccCCCCCcCCC--CCCCCCchHHHHHHHHHHHHHhh
Confidence 56554443 21 13555443 33344679999999999998653
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.00 E-value=9e-10 Score=109.66 Aligned_cols=106 Identities=20% Similarity=0.278 Sum_probs=79.2
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
+++++.+|+++++ ++..+++ ++|+|||+||..... .++...+++|+.|+.+++++|++.+.++++||+|
T Consensus 53 ~~~~~~~Dl~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~S 126 (349)
T TIGR02622 53 KIEDHFGDIRDAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVT 126 (349)
T ss_pred CceEEEccCCCHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5778899999873 4455555 469999999965432 2445678999999999999998865468999999
Q ss_pred CCccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|..+||.. .+.+|+. |..|.+.|+.+|.+.|.++..+
T Consensus 127 S~~vyg~~~~~~~~~e~~---~~~p~~~Y~~sK~~~e~~~~~~ 166 (349)
T TIGR02622 127 SDKCYRNDEWVWGYRETD---PLGGHDPYSSSKACAELVIASY 166 (349)
T ss_pred chhhhCCCCCCCCCccCC---CCCCCCcchhHHHHHHHHHHHH
Confidence 98777653 2466643 4455567788899888888654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=105.88 Aligned_cols=107 Identities=25% Similarity=0.259 Sum_probs=81.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
++++++.+|++|++ ++..++++ +|+|||+||..... .+.+..+++|+.|+.+++++|++.+.-.++||+
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 123 (317)
T TIGR01181 50 PRYRFVKGDIGDRE------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHI 123 (317)
T ss_pred CCcEEEEcCCcCHH------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 36788999999873 45666665 89999999986543 345567899999999999999986422389999
Q ss_pred eCCccccCCC---cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDRE---EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~~---~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.+++|... +.+|+. |..|.+.|+.+|+..|.++..+
T Consensus 124 Ss~~v~g~~~~~~~~~e~~---~~~~~~~Y~~sK~~~e~~~~~~ 164 (317)
T TIGR01181 124 STDEVYGDLEKGDAFTETT---PLAPSSPYSASKAASDHLVRAY 164 (317)
T ss_pred eccceeCCCCCCCCcCCCC---CCCCCCchHHHHHHHHHHHHHH
Confidence 9998877532 466643 4455667889999999988754
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.9e-10 Score=108.33 Aligned_cols=84 Identities=19% Similarity=0.237 Sum_probs=64.6
Q ss_pred CccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccCC--CcccccccCCCCCHHHHHHH
Q psy16526 332 NVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDR--EEVREIIYSPPYDPQKIIET 408 (422)
Q Consensus 332 ~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~ 408 (422)
++|+||||||..+.. .+....++.|+.||.+|+++|++.+ + +|||+||+++||.. .+.+|+. |.+|.+.|+.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~---~~~p~~~Y~~ 142 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEERE---YEKPLNVYGY 142 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCC---CCCCCCHHHH
Confidence 689999999865432 2334568999999999999999976 5 69999999888763 2466644 4444557888
Q ss_pred HhhCCHHHhhhc
Q psy16526 409 MEWMDDSLVNTL 420 (422)
Q Consensus 409 ~K~~~E~~~~~~ 420 (422)
+|.++|+++..+
T Consensus 143 sK~~~E~~~~~~ 154 (308)
T PRK11150 143 SKFLFDEYVRQI 154 (308)
T ss_pred HHHHHHHHHHHH
Confidence 999999888765
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-09 Score=107.00 Aligned_cols=106 Identities=20% Similarity=0.155 Sum_probs=80.4
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
++.++.+|++|++ .+..++. ++|+|||+||..... ....+.+++|+.|+.+++++|++.+ +++||++|
T Consensus 51 ~~~~~~~Dl~d~~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~S 123 (338)
T PRK10675 51 HPTFVEGDIRNEA------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSS 123 (338)
T ss_pred CceEEEccCCCHH------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEec
Confidence 4678899999873 3444443 689999999876532 2345678999999999999999986 89999999
Q ss_pred CCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|..++|.. .+++|+.+. .+|.+.|+.+|...|+++..+
T Consensus 124 s~~~yg~~~~~~~~E~~~~--~~p~~~Y~~sK~~~E~~~~~~ 163 (338)
T PRK10675 124 SATVYGDQPKIPYVESFPT--GTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_pred cHHhhCCCCCCccccccCC--CCCCChhHHHHHHHHHHHHHH
Confidence 98777653 357775432 145667889999999988754
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-09 Score=109.36 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=81.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|++|++ ++..+++++|+|||+|+.++... ......++|+.||.+++++|++..++++|||+||
T Consensus 107 ~~~~~v~~Dl~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS 180 (367)
T PLN02686 107 DGIWTVMANLTEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSS 180 (367)
T ss_pred CceEEEEcCCCCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Confidence 35789999999973 45677788999999999865332 2234578899999999999998634999999999
Q ss_pred C--ccccC----C--CcccccccC---CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 A--YCNCD----R--EEVREIIYS---PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~--~~~g~----~--~~~~E~~~~---~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .++|. . ..++|+... .|.+|...|+.+|.++|.++..+
T Consensus 181 ~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 230 (367)
T PLN02686 181 LLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRA 230 (367)
T ss_pred HHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHH
Confidence 6 34542 1 225565321 24556778999999999998654
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.3e-09 Score=104.63 Aligned_cols=93 Identities=15% Similarity=0.233 Sum_probs=73.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|++|+ +++..+++++|+|||+||..... .++.+.+++|+.|+.+++++|++.+ +++||++||
T Consensus 53 ~~~~~v~~Dl~d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS 125 (324)
T TIGR03589 53 PCLRFFIGDVRDK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALST 125 (324)
T ss_pred CcEEEEEccCCCH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 4688999999987 35567778899999999975432 2445678999999999999999976 889999999
Q ss_pred CccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 382 AYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 382 ~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.. +..|.+.|+.+|...|.++..
T Consensus 126 ~~---------------~~~p~~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 126 DK---------------AANPINLYGATKLASDKLFVA 148 (324)
T ss_pred CC---------------CCCCCCHHHHHHHHHHHHHHH
Confidence 52 222345688899999998765
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.7e-09 Score=104.09 Aligned_cols=101 Identities=21% Similarity=0.230 Sum_probs=73.6
Q ss_pred EEeCcCCCCCCCCCHHHHHHHh----cCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 309 PILGDITEPELGISQNDQKILK----QNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~----~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+.+|+++++. ++.+. .++|+|||+||..+.. .+....+++|+.||.+++++|++.+ + +|||+||++
T Consensus 45 ~~~~d~~~~~~------~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~ 116 (314)
T TIGR02197 45 VIADYIDKEDF------LDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAA 116 (314)
T ss_pred eeeccCcchhH------HHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHH
Confidence 45677776642 24443 4799999999976533 3455678999999999999999976 5 799999998
Q ss_pred cccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+||.. .+..|+.. +..|.+.|+.+|+..|.++..
T Consensus 117 vy~~~~~~~~e~~~--~~~p~~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 117 TYGDGEAGFREGRE--LERPLNVYGYSKFLFDQYVRR 151 (314)
T ss_pred hcCCCCCCcccccC--cCCCCCHHHHHHHHHHHHHHH
Confidence 88753 34455432 234566788999999988764
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.6e-09 Score=100.68 Aligned_cols=99 Identities=19% Similarity=0.255 Sum_probs=74.8
Q ss_pred eCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 311 LGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
.+|+.++ +++..++++ +|+|||+||..+.. ......+++|+.|+.+++++|++.+ . +|||+||.++|
T Consensus 33 ~~d~~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy 104 (287)
T TIGR01214 33 QLDLTDP------EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVF 104 (287)
T ss_pred ccCCCCH------HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeee
Confidence 4677665 345666665 49999999976543 2345668999999999999999876 4 89999999888
Q ss_pred cC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 386 CD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 386 g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+. ..+++|+. |.+|.+.|+.+|..+|+++..+
T Consensus 105 ~~~~~~~~~E~~---~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 105 DGEGKRPYREDD---ATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred cCCCCCCCCCCC---CCCCcchhhHHHHHHHHHHHHh
Confidence 65 24577754 4455667899999999988754
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-09 Score=101.19 Aligned_cols=104 Identities=19% Similarity=0.285 Sum_probs=83.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++.+.-|++.+ ++.++|.|||+||+.+.. .++-....+|+.||.+++-.|++.+ +||+++||
T Consensus 75 ~~fel~~hdv~~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aST 141 (350)
T KOG1429|consen 75 PNFELIRHDVVEP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAST 141 (350)
T ss_pred cceeEEEeechhH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeec
Confidence 4566666777654 556899999999987633 4444568899999999999999976 89999999
Q ss_pred CccccCC--Cccccccc--CCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 382 AYCNCDR--EEVREIIY--SPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~--~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+-+||+. .|..|+.. ..|.+|++.|.+.|+++|.++-+|.
T Consensus 142 seVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~ 185 (350)
T KOG1429|consen 142 SEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYH 185 (350)
T ss_pred ccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhh
Confidence 9999873 34555543 4799999999999999999997763
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.2e-08 Score=97.50 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=78.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+++++.+|++|++ ++..++.++|.|+|+++.... ....++.+++|+.||.+++++|++..+++++|++||..
T Consensus 57 ~~~~~~~~Dl~d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~ 130 (297)
T PLN02583 57 ERLKVFDVDPLDYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130 (297)
T ss_pred CceEEEEecCCCHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchH
Confidence 46889999999873 456778899999999865532 22345679999999999999998864479999999974
Q ss_pred cc--c-C----CCcccccccCCCC---CHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CN--C-D----REEVREIIYSPPY---DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~--g-~----~~~~~E~~~~~p~---~p~~~y~~~K~~~E~~~~~~ 420 (422)
++ + . ..+++|+.+..+. .+...|+.+|.++|+++..+
T Consensus 131 a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~ 177 (297)
T PLN02583 131 AVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWAL 177 (297)
T ss_pred heecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHH
Confidence 43 3 1 1245664322111 11237999999999998554
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.1e-08 Score=98.01 Aligned_cols=105 Identities=18% Similarity=0.229 Sum_probs=79.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
+++++.+|+++++ +++.++. ++|+|||+||..... ....+.++.|+.|+.+++++|++.+ ++++|++|
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~s 120 (328)
T TIGR01179 48 RVTFVEGDLRDRE------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSS 120 (328)
T ss_pred ceEEEECCCCCHH------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEec
Confidence 5778899999873 3445543 699999999976433 2334568899999999999999876 78999999
Q ss_pred CCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.+++|.. .+++|+. |..|.+.|+.+|...|.++..+
T Consensus 121 s~~~~g~~~~~~~~e~~---~~~~~~~y~~sK~~~e~~~~~~ 159 (328)
T TIGR01179 121 SAAVYGEPSSIPISEDS---PLGPINPYGRSKLMSERILRDL 159 (328)
T ss_pred chhhcCCCCCCCccccC---CCCCCCchHHHHHHHHHHHHHH
Confidence 98777653 3567754 4446667888999999888754
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.6e-08 Score=93.23 Aligned_cols=107 Identities=14% Similarity=0.211 Sum_probs=75.4
Q ss_pred hccccCcCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhhhHH---HHHHhhHHHHHHHHHHHHhcCC
Q psy16526 298 QERSNELAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDEALK---LSVTINMLGTKRLVELCHEMTH 372 (422)
Q Consensus 298 ~~~~~~~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~~~~---~~~~~Nv~gt~~ll~~a~~~~~ 372 (422)
........++.++.||++|.. .+.++++ ++|.|+|+||...+..+.+ ...+++..||.+|||+.|..+.
T Consensus 48 ~~~~~~~~~l~l~~gDLtD~~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~ 121 (345)
T COG1089 48 EDPHLNDPRLHLHYGDLTDSS------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGE 121 (345)
T ss_pred cccccCCceeEEEeccccchH------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCC
Confidence 333444556899999999973 3344443 6799999999877664443 3478899999999999998763
Q ss_pred -CceEEEEeCCccccC--CCcccccccCCCCCHHHHHHHHhhCC
Q psy16526 373 -LEALIHVSTAYCNCD--REEVREIIYSPPYDPQKIIETMEWMD 413 (422)
Q Consensus 373 -~~r~v~~SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~ 413 (422)
-.||..+||+--+|. ..|..|.+ |.-|+++|+.+|.-+
T Consensus 122 ~~~rfYQAStSE~fG~v~~~pq~E~T---PFyPrSPYAvAKlYa 162 (345)
T COG1089 122 KKTRFYQASTSELYGLVQEIPQKETT---PFYPRSPYAVAKLYA 162 (345)
T ss_pred cccEEEecccHHhhcCcccCccccCC---CCCCCCHHHHHHHHH
Confidence 368999999855554 56788854 555555555555433
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.6e-08 Score=95.89 Aligned_cols=63 Identities=30% Similarity=0.517 Sum_probs=44.5
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCC-CccccccccccceeeEEeecCCcccccchhHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYN-GPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLM 72 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~-g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~ 72 (422)
.++|+.|+|||+|++ +|.+||+++.. ++..+.....+|.++.++++++..+|+||||+|+++|
T Consensus 186 ~g~p~~I~Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 186 HGLPVTIYRPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp H---EEEEEE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred CCceEEEEecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 489999999999999 88999999998 8888888899999999999999999999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.8e-07 Score=89.62 Aligned_cols=69 Identities=16% Similarity=0.213 Sum_probs=56.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++++.||++|+ +++..+++++|+|||+++.. ..+.....++|+.|+.+++++|++.+ ++||||+||.
T Consensus 43 ~~v~~v~~Dl~d~------~~l~~al~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~ 111 (317)
T CHL00194 43 WGAELVYGDLSLP------ETLPPSFKGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSIL 111 (317)
T ss_pred cCCEEEECCCCCH------HHHHHHHCCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccc
Confidence 3689999999987 35677889999999998643 22334467889999999999999987 9999999985
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.1e-06 Score=81.10 Aligned_cols=97 Identities=13% Similarity=0.264 Sum_probs=68.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ ++..+ ..++|+|||+||..... +..+..+++|+.|+.++++++
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 121 (276)
T PRK06482 48 DRLWVLQLDVTDSA------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH 121 (276)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999974 22222 24689999999976422 234556889999999999997
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ .+++|++||..+... ..+.+.|+.+|+..|.+++.+
T Consensus 122 ~~~~~-~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 162 (276)
T PRK06482 122 LRRQG-GGRIVQVSSEGGQIA------------YPGFSLYHATKWGIEGFVEAV 162 (276)
T ss_pred HHhcC-CCEEEEEcCcccccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 4444 679999999643211 112457888888888777654
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-06 Score=87.83 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=56.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc----CccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ----NVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~----~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
++++++.||++|++ ++..+++ ++|+||||+|.... ...+.+++|+.++.+++++|++.+ +++||++|
T Consensus 111 ~~v~~v~~Dl~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iS 181 (390)
T PLN02657 111 PGAEVVFGDVTDAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREVG-AKHFVLLS 181 (390)
T ss_pred CCceEEEeeCCCHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHcC-CCEEEEEe
Confidence 46889999999973 4455555 69999999885321 122346789999999999999987 89999999
Q ss_pred CCccc
Q psy16526 381 TAYCN 385 (422)
Q Consensus 381 S~~~~ 385 (422)
|.+++
T Consensus 182 S~~v~ 186 (390)
T PLN02657 182 AICVQ 186 (390)
T ss_pred ecccc
Confidence 98764
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.1e-06 Score=81.34 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=72.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-cCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-QNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+++++.+|+++.. .++...+ .++|+|||+++...... ....+++|..|+.++++++++.+ ++++|++||..
T Consensus 62 ~~~~~~~~Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~ 134 (251)
T PLN00141 62 PSLQIVRADVTEGS-----DKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSIL 134 (251)
T ss_pred CceEEEEeeCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHcC-CCEEEEEcccc
Confidence 46899999999841 2344455 58999999988643211 22235789999999999999876 89999999998
Q ss_pred cccCCC--cccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDRE--EVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~~--~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++|... +..+. ..+.++++.+...|...|++++.
T Consensus 135 v~g~~~~~~~~~~--~~~~~~~~~~~~~k~~~e~~l~~ 170 (251)
T PLN00141 135 VNGAAMGQILNPA--YIFLNLFGLTLVAKLQAEKYIRK 170 (251)
T ss_pred ccCCCcccccCcc--hhHHHHHHHHHHHHHHHHHHHHh
Confidence 776432 11110 11234556666678888877654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.4e-06 Score=81.55 Aligned_cols=109 Identities=13% Similarity=0.140 Sum_probs=72.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-----hhHHHHHHhhHHH----HHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-----EALKLSVTINMLG----TKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-----~~~~~~~~~Nv~g----t~~ll~~a~ 368 (422)
.++.++.+|++|.+ +++.+. .++|+|||+||..... +..+..+++|+.| |..+++.++
T Consensus 67 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~ 140 (306)
T PRK06197 67 ADVTLQELDLTSLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLL 140 (306)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 46889999999874 222222 3589999999975322 2334568899999 667777776
Q ss_pred hcCCCceEEEEeCCcccc-CCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMTHLEALIHVSTAYCNC-DREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~~~~r~v~~SS~~~~g-~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..+.. ...+.++.....+..+...|+.+|...+.+.+.+
T Consensus 141 ~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 192 (306)
T PRK06197 141 PVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYEL 192 (306)
T ss_pred hCC-CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHH
Confidence 654 57999999974332 1122222222345667788999998887776654
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.1e-06 Score=85.23 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=72.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+++++.||++|. +++...+.++|+|||+||..... .+....+++|+.|+.+++++|++.+ +++||++||..
T Consensus 138 ~~v~iV~gDLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSig 210 (576)
T PLN03209 138 EKLEIVECDLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLG 210 (576)
T ss_pred CceEEEEecCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccch
Confidence 4689999999986 34567778999999999875421 2345568899999999999999876 89999999986
Q ss_pred cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.... ..+ ...+..+.|...|..+|+.+..
T Consensus 211 a~~~g--~p~----~~~~sk~~~~~~KraaE~~L~~ 240 (576)
T PLN03209 211 TNKVG--FPA----AILNLFWGVLCWKRKAEEALIA 240 (576)
T ss_pred hcccC--ccc----cchhhHHHHHHHHHHHHHHHHH
Confidence 53111 111 1233445566667777776653
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.2e-05 Score=77.36 Aligned_cols=75 Identities=16% Similarity=-0.014 Sum_probs=52.1
Q ss_pred HHHhcCccEEEEcccccChh-----hhHHHHHHhhHHHHHHHHHHHHhcCCCc--eEEEEeCCccccC--CCcccccccC
Q psy16526 327 KILKQNVSVVFHSAATVKFD-----EALKLSVTINMLGTKRLVELCHEMTHLE--ALIHVSTAYCNCD--REEVREIIYS 397 (422)
Q Consensus 327 ~~~~~~~d~ViH~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~--r~v~~SS~~~~g~--~~~~~E~~~~ 397 (422)
...+.++|+|||+||..... ....+.+++|+.||.+++++|++.+ ++ +++++||.+++|. ..+++|+.++
T Consensus 52 ~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~ 130 (292)
T TIGR01777 52 SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSP 130 (292)
T ss_pred hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCC
Confidence 34557899999999975431 2344568899999999999999986 53 5666666666664 3467776544
Q ss_pred CCCCH
Q psy16526 398 PPYDP 402 (422)
Q Consensus 398 ~p~~p 402 (422)
.|.++
T Consensus 131 ~~~~~ 135 (292)
T TIGR01777 131 AGDDF 135 (292)
T ss_pred CCCCh
Confidence 34433
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.8e-05 Score=76.24 Aligned_cols=108 Identities=13% Similarity=0.163 Sum_probs=69.2
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-----hhHHHHHHhhHHHHHHHHHH----HHh
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-----EALKLSVTINMLGTKRLVEL----CHE 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~----a~~ 369 (422)
++.++.+|++|++ +++.+. .++|+|||+||..... +..+..+++|+.|+..+.+. +++
T Consensus 72 ~v~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~ 145 (315)
T PRK06196 72 GVEVVMLDLADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA 145 (315)
T ss_pred hCeEEEccCCCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3788999999873 223322 4689999999975321 23456689999996665554 444
Q ss_pred cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..........++.....|..+...|+.+|...+.+...+
T Consensus 146 ~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 195 (315)
T PRK06196 146 GA-GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHL 195 (315)
T ss_pred cC-CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHH
Confidence 43 469999999744322111111111345667888999999888776544
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.1e-05 Score=74.36 Aligned_cols=97 Identities=9% Similarity=0.112 Sum_probs=65.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++..+.+|++|++ .+..++ .++|+|||+||..... +..++.+++|+.|+.++++++..
T Consensus 50 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 123 (277)
T PRK06180 50 DRALARLLDVTDFD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG 123 (277)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46888999999974 222222 3589999999975421 23455689999999999998643
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.... + +...|+.+|...|.+++.+
T Consensus 124 ~~~~~-~~~iv~iSS~~~~~~~---------~---~~~~Y~~sK~a~~~~~~~l 164 (277)
T PRK06180 124 MRARR-RGHIVNITSMGGLITM---------P---GIGYYCGSKFALEGISESL 164 (277)
T ss_pred HhccC-CCEEEEEecccccCCC---------C---CcchhHHHHHHHHHHHHHH
Confidence 33 5689999997544221 1 2345667777666665543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.3e-05 Score=87.86 Aligned_cols=65 Identities=20% Similarity=0.184 Sum_probs=54.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++++.+|++|+ +++..+++++|+|||+|+..+. ..++|+.||.+++++|++.+ +++|||+||.
T Consensus 40 ~~v~~v~gDL~D~------~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~ 104 (854)
T PRK05865 40 SSADFIAADIRDA------TAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAETG-TGRIVFTSSG 104 (854)
T ss_pred cCceEEEeeCCCH------HHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCc
Confidence 3578999999987 3556777899999999986532 36789999999999999986 8999999996
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.7e-05 Score=73.67 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=52.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHH----HHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLG----TKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~g----t~~ll~~ 366 (422)
.++.++++|++|++ .++.+. .++|+|||+||..... +..+..+++|+.| +.+++++
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~ 129 (262)
T PRK13394 56 GKAIGVAMDVTNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKH 129 (262)
T ss_pred ceEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 45788999999874 222222 3589999999975421 2344568899999 7777887
Q ss_pred H-HhcCCCceEEEEeCCccc
Q psy16526 367 C-HEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 367 a-~~~~~~~r~v~~SS~~~~ 385 (422)
+ ++.+ .+++|++||.++.
T Consensus 130 ~~~~~~-~~~iv~~ss~~~~ 148 (262)
T PRK13394 130 MYKDDR-GGVVIYMGSVHSH 148 (262)
T ss_pred HHhhcC-CcEEEEEcchhhc
Confidence 7 5544 7899999997543
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.92 E-value=5e-05 Score=71.21 Aligned_cols=98 Identities=12% Similarity=0.073 Sum_probs=67.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----h---hhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----D---EALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----~---~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++.+. .++|+|||+|+.... . +.++..++.|+.|+.++++++.
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (251)
T PRK12826 55 GKARARQVDVRDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA 128 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35889999999873 233333 368999999987653 1 3445668999999999999884
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..+.+. +..+...|+.+|...|.+++.+
T Consensus 129 ~~~~~-~~~ii~~ss~~~~~~-----------~~~~~~~y~~sK~a~~~~~~~~ 170 (251)
T PRK12826 129 LIRAG-GGRIVLTSSVAGPRV-----------GYPGLAHYAASKAGLVGFTRAL 170 (251)
T ss_pred HHHcC-CcEEEEEechHhhcc-----------CCCCccHHHHHHHHHHHHHHHH
Confidence 333 678999999755411 1222345777777777666554
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.5e-05 Score=74.20 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=66.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||..... +.++..+++|+.|+.++++++
T Consensus 55 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (287)
T PRK06194 55 AEVLGVRTDVSDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPL 128 (287)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46788999999874 3333332 579999999986421 334456899999999977764
Q ss_pred -HhcCC-----CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTH-----LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~-----~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+. ..++|++||.+++... .+...|+.+|...|.+++.+
T Consensus 129 ~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 175 (287)
T PRK06194 129 MLAAAEKDPAYEGHIVNTASMAGLLAP------------PAMGIYNVSKHAVVSLTETL 175 (287)
T ss_pred HHhcCCCCCCCCeEEEEeCChhhccCC------------CCCcchHHHHHHHHHHHHHH
Confidence 33321 1489999998665321 12246788888888777654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.6e-05 Score=74.94 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=66.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh----cCccEEEEcccccChh-------hhHHHHHHhhHHH----HHHHHHHHHhc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK----QNVSVVFHSAATVKFD-------EALKLSVTINMLG----TKRLVELCHEM 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~----~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~g----t~~ll~~a~~~ 370 (422)
+++++.+|++|++.. +...+.+. .++|+|||+||..... +..+..+++|+.| ++++++.+++.
T Consensus 48 ~~~~~~~Dl~d~~~~--~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~ 125 (277)
T PRK05993 48 GLEAFQLDYAEPESI--AALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ 125 (277)
T ss_pred CceEEEccCCCHHHH--HHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence 578899999987411 00112221 2579999999875421 2345568999999 66777777776
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||.++.. |..+.+.|+.+|...|.+.+.+
T Consensus 126 ~-~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 162 (277)
T PRK05993 126 G-QGRIVQCSSILGLV------------PMKYRGAYNASKFAIEGLSLTL 162 (277)
T ss_pred C-CCEEEEECChhhcC------------CCCccchHHHHHHHHHHHHHHH
Confidence 5 67999999975532 1223456888888888877654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.1e-05 Score=74.01 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=69.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhc-CCCce
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEM-THLEA 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r 375 (422)
.++.++.+|+++++ ++..+. .++|+|||+|+.... ..++...+++|+.|+.++++++.+. ....+
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~ 129 (248)
T PRK07806 56 GRASAVGADLTDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSR 129 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCce
Confidence 45788999999874 222222 368999999986432 1234456889999999999999864 11358
Q ss_pred EEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|++||..+... +..+ +.| .++.|+.+|...|.++..+
T Consensus 130 iv~isS~~~~~~--~~~~---~~~--~~~~Y~~sK~a~e~~~~~l 167 (248)
T PRK07806 130 VVFVTSHQAHFI--PTVK---TMP--EYEPVARSKRAGEDALRAL 167 (248)
T ss_pred EEEEeCchhhcC--cccc---CCc--cccHHHHHHHHHHHHHHHH
Confidence 999999643211 1111 112 2668899999999988765
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.4e-05 Score=80.60 Aligned_cols=86 Identities=12% Similarity=0.149 Sum_probs=61.1
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
+++++.||++|.. +.. ...++|+|||+++. ++.++.+++++|++.+ +++|||+||.++|
T Consensus 111 ~v~~v~~D~~d~~------~~~-~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vy 169 (378)
T PLN00016 111 GVKTVWGDPADVK------SKV-AGAGFDVVYDNNGK-------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVY 169 (378)
T ss_pred CceEEEecHHHHH------hhh-ccCCccEEEeCCCC-------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhc
Confidence 4789999997721 111 12479999999763 2457899999999987 9999999999888
Q ss_pred cCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 386 CDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 386 g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
|.. .+..|+. +.+|.. +|+..|++++.
T Consensus 170 g~~~~~p~~E~~---~~~p~~----sK~~~E~~l~~ 198 (378)
T PLN00016 170 KKSDEPPHVEGD---AVKPKA----GHLEVEAYLQK 198 (378)
T ss_pred CCCCCCCCCCCC---cCCCcc----hHHHHHHHHHH
Confidence 753 3556643 333333 68888887754
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.3e-05 Score=75.18 Aligned_cols=110 Identities=16% Similarity=0.130 Sum_probs=69.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 128 (322)
T PRK07453 55 DSYTIIHIDLGDLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE 128 (322)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 46889999999874 223322 248999999996421 123456689999999999888764
Q ss_pred c----C-CCceEEEEeCCcccc----CCC--cccccc-----------------cCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----T-HLEALIHVSTAYCNC----DRE--EVREII-----------------YSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~-~~~r~v~~SS~~~~g----~~~--~~~E~~-----------------~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. + +..|+|++||...+. ... +..++. ...|.+|...|+.+|.+.+.+...+
T Consensus 129 ~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 207 (322)
T PRK07453 129 DLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMREL 207 (322)
T ss_pred HHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHH
Confidence 2 2 125999999974332 110 111100 0135667788999998776655443
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.9e-05 Score=73.57 Aligned_cols=97 Identities=14% Similarity=0.218 Sum_probs=66.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|+++++ ++..+ ..++|+|||+||.... .+.+++.+++|+.|+.++++.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 122 (275)
T PRK08263 49 DRLLPLALDVTDRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122 (275)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45788899999874 22222 2367999999997642 1345667999999998888876
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ .+++|++||..+..... ..+.|+.+|...|.+.+.+
T Consensus 123 ~~~~~-~~~iv~vsS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l 163 (275)
T PRK08263 123 LREQR-SGHIIQISSIGGISAFP------------MSGIYHASKWALEGMSEAL 163 (275)
T ss_pred HHhcC-CCEEEEEcChhhcCCCC------------CccHHHHHHHHHHHHHHHH
Confidence 4443 67999999976543211 1235777787777666543
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.3e-05 Score=71.78 Aligned_cols=102 Identities=15% Similarity=0.059 Sum_probs=68.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.++ .++|+|||+||.... .+.+++.+++|+.|+.++++++...
T Consensus 61 ~~~~~~~~Dl~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (259)
T PRK08213 61 IDALWIAADVADEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR 134 (259)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 46788999999974 222222 368999999986421 1334566889999999999988653
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++..++|++||..+.....+. ..+...|..+|++.|.+++.+
T Consensus 135 ~l~~~~~~~~v~~sS~~~~~~~~~~--------~~~~~~Y~~sKa~~~~~~~~~ 180 (259)
T PRK08213 135 SMIPRGYGRIINVASVAGLGGNPPE--------VMDTIAYNTSKGAVINFTRAL 180 (259)
T ss_pred HHHhcCCeEEEEECChhhccCCCcc--------ccCcchHHHHHHHHHHHHHHH
Confidence 225789999997554322110 012346778888888877654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.8e-05 Score=72.48 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLV 364 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll 364 (422)
.+++++.+|++|++ ++..+. .++|+|||+||..... ...+..+++|+.|+.+++
T Consensus 56 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 129 (254)
T PRK12746 56 GKAFLIEADLNSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLI 129 (254)
T ss_pred CcEEEEEcCcCCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 45789999999974 222222 2589999999875321 123455789999999999
Q ss_pred HHHHhc-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.+. .+..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 130 ~~~~~~~~~~~~~v~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 174 (254)
T PRK12746 130 QQTLPLLRAEGRVINISSAEVRLG------------FTGSIAYGLSKGALNTMTLPL 174 (254)
T ss_pred HHHHHHhhcCCEEEEECCHHhcCC------------CCCCcchHhhHHHHHHHHHHH
Confidence 998763 22358999999766432 112335777777777665443
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.5e-05 Score=66.85 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=67.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
..+++++.||+.|+ +++...+.++|+|||+++.... ...++++++++|++++ ++++|++||..
T Consensus 38 ~~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~~-~~~~v~~s~~~ 100 (183)
T PF13460_consen 38 SPGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKAG-VKRVVYLSSAG 100 (183)
T ss_dssp CTTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHTT-SSEEEEEEETT
T ss_pred ccccccceeeehhh------hhhhhhhhhcchhhhhhhhhcc----------cccccccccccccccc-cccceeeeccc
Confidence 57899999999887 4678888899999999975432 1778999999999987 99999999998
Q ss_pred cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 384 CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 384 ~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
+++........ ..+..+ ..|...|...|+.++
T Consensus 101 ~~~~~~~~~~~--~~~~~~-~~~~~~~~~~e~~~~ 132 (183)
T PF13460_consen 101 VYRDPPGLFSD--EDKPIF-PEYARDKREAEEALR 132 (183)
T ss_dssp GTTTCTSEEEG--GTCGGG-HHHHHHHHHHHHHHH
T ss_pred cCCCCCccccc--ccccch-hhhHHHHHHHHHHHH
Confidence 77653221110 011111 344455555566654
|
... |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.6e-05 Score=72.69 Aligned_cols=97 Identities=11% Similarity=0.134 Sum_probs=67.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.+++++++|++|++ +++.++ .++|+|||+||..... +..+..+++|+.|+.++++++
T Consensus 45 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 118 (270)
T PRK06179 45 PGVELLELDVTDDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH 118 (270)
T ss_pred CCCeeEEeecCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46789999999874 333433 3579999999975421 344567899999999999885
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ .+++|++||.++... .| ..+.|+.+|...|.+.+.+
T Consensus 119 ~~~~~-~~~iv~isS~~~~~~----------~~--~~~~Y~~sK~a~~~~~~~l 159 (270)
T PRK06179 119 MRAQG-SGRIINISSVLGFLP----------AP--YMALYAASKHAVEGYSESL 159 (270)
T ss_pred HHhcC-CceEEEECCccccCC----------CC--CccHHHHHHHHHHHHHHHH
Confidence 3444 689999999765421 11 2346777888777766553
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=8.1e-05 Score=69.48 Aligned_cols=97 Identities=10% Similarity=0.113 Sum_probs=66.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|+++++ ++..+. .++|+|||+||.... .+.+.+.+++|+.|+.++++.+.
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (249)
T PRK12825 56 RRAQAVQADVTDKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP 129 (249)
T ss_pred CceEEEECCcCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999874 223222 468999999996432 12345668899999999999883
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..++... .+...|..+|...|.+++.+
T Consensus 130 ~~~~~-~~~~i~~SS~~~~~~~------------~~~~~y~~sK~~~~~~~~~~ 170 (249)
T PRK12825 130 MRKQR-GGRIVNISSVAGLPGW------------PGRSNYAAAKAGLVGLTKAL 170 (249)
T ss_pred HHhcC-CCEEEEECccccCCCC------------CCchHHHHHHHHHHHHHHHH
Confidence 444 7899999997654221 12345777777766666543
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.9e-05 Score=70.91 Aligned_cols=95 Identities=13% Similarity=0.093 Sum_probs=65.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------h---hhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------D---EALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~---~~~~~~~~~Nv~gt~~ll~~a 367 (422)
.++..+.+|+++++ +++.+ ...+|+|||+||.... . +..++.+++|+.|+.++++++
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 128 (250)
T PRK07774 55 GTAIAVQVDVSDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAV 128 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 35678899999874 22222 2368999999997421 1 234456889999999999998
Q ss_pred Hhc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
... .+.+++|++||..+++ +.+.|+.+|...|.+++.+
T Consensus 129 ~~~~~~~~~~~iv~~sS~~~~~---------------~~~~Y~~sK~a~~~~~~~l 169 (250)
T PRK07774 129 YKHMAKRGGGAIVNQSSTAAWL---------------YSNFYGLAKVGLNGLTQQL 169 (250)
T ss_pred HHHHHHhCCcEEEEEecccccC---------------CccccHHHHHHHHHHHHHH
Confidence 753 1246899999976542 1235777888777776654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=5.5e-05 Score=71.40 Aligned_cols=98 Identities=9% Similarity=0.047 Sum_probs=66.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|+++++ ++..+. ..+|+|||+||..+. .+.+++.+++|+.|+.++++++.
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (256)
T PRK12745 52 VEVIFFPADVADLS------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA 125 (256)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 46889999999874 222222 368999999987431 13455678999999999999875
Q ss_pred hc----CC-----CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM----TH-----LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~----~~-----~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+. .+ .+++|++||..+.... .+.+.|+.+|...|.+++.+
T Consensus 126 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 174 (256)
T PRK12745 126 KRMLAQPEPEELPHRSIVFVSSVNAIMVS------------PNRGEYCISKAGLSMAAQLF 174 (256)
T ss_pred HHHHhccCcCCCCCcEEEEECChhhccCC------------CCCcccHHHHHHHHHHHHHH
Confidence 42 11 4679999997553221 12235777777777776654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.5e-05 Score=69.58 Aligned_cols=98 Identities=10% Similarity=0.118 Sum_probs=65.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
..+.++.+|++|++ ++..+. .++|+|||+||.... .+..++.+++|+.|+.++++++...
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 57 GSAAALQADLLDPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 35788999999863 223332 368999999996431 1334567899999999999999642
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-..++++|+.. | ..|..|...|+.+|...|.++..+
T Consensus 131 ~~~~~~~~~~~~~~~---------~---~~~~~~~~~Y~~sK~~~~~~~~~l 170 (249)
T PRK09135 131 LRKQRGAIVNITDIH---------A---ERPLKGYPVYCAAKAALEMLTRSL 170 (249)
T ss_pred HhhCCeEEEEEeChh---------h---cCCCCCchhHHHHHHHHHHHHHHH
Confidence 1113455554422 1 134556678999999988888764
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.8e-05 Score=70.41 Aligned_cols=97 Identities=11% Similarity=0.099 Sum_probs=64.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+. ..+|+|||+||..... +.+++.+++|+.|+.++++++...
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (247)
T PRK12935 56 HDVYAVQADVSKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPY 129 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999874 223332 3479999999975421 345567899999999999998742
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+..++|++||.++.... .+ .+.|..+|...|.+++.
T Consensus 130 ~~~~~~~~iv~~sS~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~ 169 (247)
T PRK12935 130 ITEAEEGRIISISSIIGQAGG---------FG---QTNYSAAKAGMLGFTKS 169 (247)
T ss_pred HHHcCCcEEEEEcchhhcCCC---------CC---CcchHHHHHHHHHHHHH
Confidence 124689999997554221 12 23566667665555544
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=9.5e-05 Score=69.69 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=50.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHH----HHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRL----VEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~l----l~~ 366 (422)
.+++++.+|+++++ ++..++ .++|+|||+|+..... ...+..+++|+.|+.++ ++.
T Consensus 53 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (258)
T PRK12429 53 GKAIGVAMDVTDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPI 126 (258)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 56889999999874 223332 3689999999865432 23345678999995555 444
Q ss_pred HHhcCCCceEEEEeCCccc
Q psy16526 367 CHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 367 a~~~~~~~r~v~~SS~~~~ 385 (422)
.++.+ .++||++||.++.
T Consensus 127 ~~~~~-~~~iv~iss~~~~ 144 (258)
T PRK12429 127 MKAQG-GGRIINMASVHGL 144 (258)
T ss_pred HHhcC-CeEEEEEcchhhc
Confidence 45544 7899999997554
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00014 Score=68.19 Aligned_cols=96 Identities=9% Similarity=0.018 Sum_probs=64.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----h---hhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----D---EALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----~---~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|+++++ +++.+. .++|+|||+||.... . +.++..+++|+.|+.++++++.
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (249)
T PRK12827 59 GKALGLAFDVRDFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP 132 (249)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46889999999974 222222 468999999997641 1 2345568999999999999998
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.+ .+++|++||..+.... . +...|..+|...+.+.+.
T Consensus 133 ~~~~~~-~~~iv~~sS~~~~~~~---------~---~~~~y~~sK~a~~~~~~~ 173 (249)
T PRK12827 133 MIRARR-GGRIVNIASVAGVRGN---------R---GQVNYAASKAGLIGLTKT 173 (249)
T ss_pred HHhcCC-CeEEEEECCchhcCCC---------C---CCchhHHHHHHHHHHHHH
Confidence 333 5789999997544221 1 223466666655555443
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00015 Score=67.60 Aligned_cols=97 Identities=15% Similarity=0.228 Sum_probs=67.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccc-cC-------hhhhHHHHHHhhHHHHHHHHHHHHh----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAAT-VK-------FDEALKLSVTINMLGTKRLVELCHE---- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~-~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~---- 369 (422)
.++.++.+|+++++ +++++.+ .+|+|||+||. .. ..+...+.+++|+.|+.++++++.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 122 (238)
T PRK08264 49 PRVVPLQLDVTDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA 122 (238)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 56889999999873 3344443 58999999997 22 1133455688999999999998753
Q ss_pred cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..+++++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 123 ~~-~~~~v~~sS~~~~~~------------~~~~~~y~~sK~a~~~~~~~l 160 (238)
T PRK08264 123 NG-GGAIVNVLSVLSWVN------------FPNLGTYSASKAAAWSLTQAL 160 (238)
T ss_pred cC-CCEEEEEcChhhccC------------CCCchHhHHHHHHHHHHHHHH
Confidence 33 568999999765421 223456888888887776654
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.2e-05 Score=71.99 Aligned_cols=106 Identities=14% Similarity=0.090 Sum_probs=70.5
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHh----cCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCC
Q psy16526 308 KPILGDITEPELGISQNDQKILK----QNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTA 382 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~----~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~ 382 (422)
+++.+|++|.+ +++.+. .++|+|||+||... ..+.+..+++|+.|+..+++++... .+-.++|++||.
T Consensus 26 ~~~~~Dl~~~~------~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~ 98 (241)
T PRK12428 26 GFIQADLGDPA------SIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASL 98 (241)
T ss_pred HhhcccCCCHH------HHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcH
Confidence 46788998863 334443 36899999999764 3456777999999999999998753 112589999998
Q ss_pred ccccCC--Cccccccc-------------CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDR--EEVREIIY-------------SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~--~~~~E~~~-------------~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++.. .+..|... ..|......|+.+|...+.+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 151 (241)
T PRK12428 99 AGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQ 151 (241)
T ss_pred HhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHH
Confidence 665421 11111100 024445567888888877766544
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00011 Score=70.18 Aligned_cols=95 Identities=12% Similarity=0.215 Sum_probs=62.4
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHH----HHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGT----KRLVELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt----~~ll~~a 367 (422)
+++++.+|++|++ +++.+. .++|+|||+||..... +.++..+++|+.|+ +.+++.+
T Consensus 47 ~~~~~~~Dv~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 120 (273)
T PRK06182 47 GVHPLSLDVTDEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHM 120 (273)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHH
Confidence 4788999999874 333333 3789999999975421 23456688999995 4555555
Q ss_pred HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 368 HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 368 ~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++.+ ..++|++||.++... .| ....|+.+|...+.+.+.
T Consensus 121 ~~~~-~g~iv~isS~~~~~~----------~~--~~~~Y~~sKaa~~~~~~~ 159 (273)
T PRK06182 121 RAQR-SGRIINISSMGGKIY----------TP--LGAWYHATKFALEGFSDA 159 (273)
T ss_pred HhcC-CCEEEEEcchhhcCC----------CC--CccHhHHHHHHHHHHHHH
Confidence 6554 578999999654211 11 123577788877776543
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00013 Score=69.39 Aligned_cols=98 Identities=12% Similarity=0.074 Sum_probs=66.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+ ..++|+|||+||.... .+..+..+++|+.|+.++.+++...
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (263)
T PRK07814 59 RRAHVVAADLAHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL 132 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 46888999999874 22222 2368999999986431 1344567899999999999999741
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||.++.. |..+...|+.+|...|.+++.+
T Consensus 133 ~~~~~~~g~iv~~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~ 174 (263)
T PRK07814 133 MLEHSGGGSVINISSTMGRL------------AGRGFAAYGTAKAALAHYTRLA 174 (263)
T ss_pred HHhhcCCeEEEEEccccccC------------CCCCCchhHHHHHHHHHHHHHH
Confidence 1246899999975421 1122346788888777776654
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00012 Score=67.58 Aligned_cols=94 Identities=13% Similarity=0.216 Sum_probs=61.2
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccChh-------hhHHHHHHhhHHH----HHHHHHHHHhcC
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKFD-------EALKLSVTINMLG----TKRLVELCHEMT 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~g----t~~ll~~a~~~~ 371 (422)
.++++++|++|++ +++++.+ ++|+|||+||..... +.....+++|+.+ +.++++.+++.
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~- 120 (227)
T PRK08219 48 GATPFPVDLTDPE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA- 120 (227)
T ss_pred cceEEecCCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-
Confidence 5788999999873 4455544 589999999875421 2344557889998 55555555553
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+++|++||..+.+... +...|+.+|...|.+++.
T Consensus 121 -~~~~v~~ss~~~~~~~~------------~~~~y~~~K~a~~~~~~~ 155 (227)
T PRK08219 121 -HGHVVFINSGAGLRANP------------GWGSYAASKFALRALADA 155 (227)
T ss_pred -CCeEEEEcchHhcCcCC------------CCchHHHHHHHHHHHHHH
Confidence 36899999976543211 123566677766666554
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00012 Score=68.80 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=66.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ ++..++ .++|+|||+||..... +.....+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (250)
T PRK08063 54 RKALAVKANVGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL 127 (250)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999874 223332 3589999999864321 223445789999999999998753
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.++||++||..+.. |..+...|+.+|...|.+++.+
T Consensus 128 ~~~~~~g~iv~~sS~~~~~------------~~~~~~~y~~sK~a~~~~~~~~ 168 (250)
T PRK08063 128 MEKVGGGKIISLSSLGSIR------------YLENYTTVGVSKAALEALTRYL 168 (250)
T ss_pred HHhcCCeEEEEEcchhhcc------------CCCCccHHHHHHHHHHHHHHHH
Confidence 1246999999964321 1223446788888888887654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00016 Score=67.97 Aligned_cols=79 Identities=9% Similarity=0.113 Sum_probs=53.4
Q ss_pred CcEEEEeCcCCCCCCCCCH--HHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH----HhcC
Q psy16526 305 AKIKPILGDITEPELGISQ--NDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC----HEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~ 371 (422)
.++.++.+|++|++-. .. ++......++|+|||+|+..... ...++.++.|+.|+..+++.+ ++.+
T Consensus 50 ~~~~~~~~D~~~~~~~-~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 128 (255)
T TIGR01963 50 GSVIYLVADVTKEDEI-ADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG 128 (255)
T ss_pred CceEEEECCCCCHHHH-HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 4688999999987410 00 01222235689999999875421 234456789999988888877 4444
Q ss_pred CCceEEEEeCCccc
Q psy16526 372 HLEALIHVSTAYCN 385 (422)
Q Consensus 372 ~~~r~v~~SS~~~~ 385 (422)
.+++|++||..+.
T Consensus 129 -~~~~v~~ss~~~~ 141 (255)
T TIGR01963 129 -WGRIINIASAHGL 141 (255)
T ss_pred -CeEEEEEcchhhc
Confidence 6899999997544
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=7.7e-05 Score=71.55 Aligned_cols=100 Identities=11% Similarity=0.166 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH----Hhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC----HEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~ 370 (422)
.+++++.+|++|++.. +.++.. ..++|+|||+||..... +..++.+++|+.|+.++++.+ ++.
T Consensus 54 ~~~~~~~~D~~d~~~~---~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (280)
T PRK06914 54 QNIKVQQLDVTDQNSI---HNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ 130 (280)
T ss_pred CceeEEecCCCCHHHH---HHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 5689999999997421 012222 24679999999875421 334556889999999998886 444
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||..+... ..+.+.|+.+|...|.+++.+
T Consensus 131 ~-~~~iv~vsS~~~~~~------------~~~~~~Y~~sK~~~~~~~~~l 167 (280)
T PRK06914 131 K-SGKIINISSISGRVG------------FPGLSPYVSSKYALEGFSESL 167 (280)
T ss_pred C-CCEEEEECcccccCC------------CCCCchhHHhHHHHHHHHHHH
Confidence 3 678999998644211 112335667777777666554
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00013 Score=68.56 Aligned_cols=98 Identities=10% Similarity=0.075 Sum_probs=65.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+. .++|+|||+|+.... .+.+++.+++|+.|+.++++.+.+
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 53 GRAIAVAADVSDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 45789999999874 333333 357999999987421 133456789999998888877764
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+.++||++||..+.+. ..+...|..+|...+.+.+.+
T Consensus 127 ~~~~~~~~~iv~~sS~~~~~~------------~~~~~~y~~sk~~~~~~~~~~ 168 (251)
T PRK07231 127 AMRGEGGGAIVNVASTAGLRP------------RPGLGWYNASKGAVITLTKAL 168 (251)
T ss_pred HHHhcCCcEEEEEcChhhcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 2 22678999999865432 223345667776666655543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00016 Score=68.52 Aligned_cols=98 Identities=10% Similarity=0.124 Sum_probs=66.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh--------hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD--------EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++ .++.++ .++|+|||+||..... +.+.+.+++|+.|+.++++.+..
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 123 (263)
T PRK06181 50 GEALVVPTDVSDAE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP 123 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999874 223322 3689999999875421 12345589999999999999863
Q ss_pred c--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 124 ~~~~~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~~~~~~~~~l 164 (263)
T PRK06181 124 HLKASRGQIVVVSSLAGLTG------------VPTRSGYAASKHALHGFFDSL 164 (263)
T ss_pred HHHhcCCEEEEEecccccCC------------CCCccHHHHHHHHHHHHHHHH
Confidence 1 12468999999755422 112346778888777776543
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=67.53 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=64.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|+++++ +++.++ .++|+|||+|+.... ....++.+++|+.|+.++++++.
T Consensus 52 ~~~~~~~~d~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (250)
T TIGR03206 52 GNAQAFACDITDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPG 125 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999874 223332 368999999986431 12234568999999999988875
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..+++... . ...|+.+|.+.|.+++.+
T Consensus 126 ~~~~~-~~~ii~iss~~~~~~~~---------~---~~~Y~~sK~a~~~~~~~l 166 (250)
T TIGR03206 126 MVERG-AGRIVNIASDAARVGSS---------G---EAVYAACKGGLVAFSKTM 166 (250)
T ss_pred HHhcC-CeEEEEECchhhccCCC---------C---CchHHHHHHHHHHHHHHH
Confidence 333 57899999976553221 1 224667776665555543
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00017 Score=67.73 Aligned_cols=97 Identities=10% Similarity=0.056 Sum_probs=64.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++++. .++|+|||+|+.... .+..++.+++|+.|+.++.+.+.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (252)
T PRK06138 53 GRAFARQGDVGSAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPI 126 (252)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 45789999999874 223332 378999999997531 12344568899999987776653
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .++++++||..+.... .....|+.+|...|.+++.+
T Consensus 127 ~~~~~-~~~ii~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 167 (252)
T PRK06138 127 MQRQG-GGSIVNTASQLALAGG------------RGRAAYVASKGAIASLTRAM 167 (252)
T ss_pred HHhcC-CeEEEEECChhhccCC------------CCccHHHHHHHHHHHHHHHH
Confidence 444 5799999997543211 11345777777777766654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0002 Score=69.66 Aligned_cols=98 Identities=10% Similarity=0.063 Sum_probs=67.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++ +.+.+ ..++|+|||+||... + .+.++..+++|+.|+.++++++..
T Consensus 106 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 106 RKAVALPGDLKDEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred CeEEEEecCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45778999999874 22222 246899999999642 1 134556799999999999999975
Q ss_pred c-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ..-.++|++||..++... .....|+.+|...+.+++.+
T Consensus 180 ~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 219 (300)
T PRK06128 180 HLPPGASIINTGSIQSYQPS------------PTLLDYASTKAAIVAFTKAL 219 (300)
T ss_pred hcCcCCEEEEECCccccCCC------------CCchhHHHHHHHHHHHHHHH
Confidence 3 112589999998665321 11235778888777776654
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00019 Score=67.40 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=66.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
++.++.+|+++++ ++..+ ..++|+|||+||..... +..++.+++|+.|+.++++++.+.
T Consensus 57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 130 (252)
T PRK06077 57 EGIGVLADVSTRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM 130 (252)
T ss_pred eeEEEEeccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh
Confidence 4678889999874 22222 24689999999963321 123456899999999999998753
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....++|++||..++. |..+...|+.+|...|.+++.+
T Consensus 131 ~~~~~iv~~sS~~~~~------------~~~~~~~Y~~sK~~~~~~~~~l 168 (252)
T PRK06077 131 REGGAIVNIASVAGIR------------PAYGLSIYGAMKAAVINLTKYL 168 (252)
T ss_pred hcCcEEEEEcchhccC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 1135899999976542 2334557777888777777654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00021 Score=67.32 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=62.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC--------hhhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK--------FDEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|+++++ +++.++ .++|+|||+||... ..+..++.+++|+.|+.++++.+.
T Consensus 46 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 119 (248)
T PRK10538 46 DNLYIAQLDVRNRA------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 (248)
T ss_pred cceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 36788999999874 222222 37899999998642 113445678999999766666653
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 120 ~~~~~~-~~~iv~isS~~~~~------------~~~~~~~Y~~sK~~~~~~~~~l 161 (248)
T PRK10538 120 GMVERN-HGHIINIGSTAGSW------------PYAGGNVYGATKAFVRQFSLNL 161 (248)
T ss_pred HHHhcC-CcEEEEECCcccCC------------CCCCCchhHHHHHHHHHHHHHH
Confidence 433 57899999965421 1122345677777766665543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00018 Score=68.95 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=66.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..++ .++|+|||+||..... +..+..+++|+.|+.++++.+...
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~ 132 (274)
T PRK07775 59 GEAVAFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPG 132 (274)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35788899999874 223222 3679999999975421 233455789999999999887531
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..+||++||..++... | +...|+.+|...|.+++.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~----------~--~~~~Y~~sK~a~~~l~~~~ 173 (274)
T PRK07775 133 MIERRRGDLIFVGSDVALRQR----------P--HMGAYGAAKAGLEAMVTNL 173 (274)
T ss_pred HHhcCCceEEEECChHhcCCC----------C--CcchHHHHHHHHHHHHHHH
Confidence 124679999997654321 1 1335778888888777654
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00011 Score=78.90 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=52.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++++. +..++.++|+|||+|+.... ...++|+.||.|++++|++.+ + ++||+||.++
T Consensus 40 ~~ve~v~~Dl~d~~-------l~~al~~~D~VIHLAa~~~~-----~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~G 105 (699)
T PRK12320 40 PRVDYVCASLRNPV-------LQELAGEADAVIHLAPVDTS-----APGGVGITGLAHVANAAARAG-A-RLLFVSQAAG 105 (699)
T ss_pred CCceEEEccCCCHH-------HHHHhcCCCEEEEcCccCcc-----chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCCC
Confidence 46889999999872 35566789999999986421 123589999999999999987 5 7999999864
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00021 Score=67.55 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=67.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc---C
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM---T 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 371 (422)
.+++++.+|+++++-. ...++.+ ...+|+|||+||..... +..+..+++|+.|+..+++++... .
T Consensus 67 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 144 (256)
T PRK12748 67 VRCEHMEIDLSQPYAP--NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK 144 (256)
T ss_pred CeEEEEECCCCCHHHH--HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Confidence 4688999999987411 0111122 23589999999875321 234556899999999999988642 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...++|++||..+++. ......|+.+|...|.+++.+
T Consensus 145 ~~~~iv~~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 181 (256)
T PRK12748 145 AGGRIINLTSGQSLGP------------MPDELAYAATKGAIEAFTKSL 181 (256)
T ss_pred CCeEEEEECCccccCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 1358999998755321 112346888888888876654
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00015 Score=69.41 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=67.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++ +++.++ .++|+|||+||.... .+.....+++|+.|+.++++++.+
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 58 GAVRYEPADVTDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46788999999874 233333 268999999985421 123455688999999999988764
Q ss_pred cC---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MT---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. +..+++++||..+... ..+.+.|+.+|.+.|.+++.+
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 173 (276)
T PRK05875 132 ELVRGGGGSFVGISSIAASNT------------HRWFGAYGVTKSAVDHLMKLA 173 (276)
T ss_pred HHHhcCCcEEEEEechhhcCC------------CCCCcchHHHHHHHHHHHHHH
Confidence 21 1358999999765321 112456788888888887654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=68.00 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=63.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
+.+.++.+|++|++ ++..+. .++|+|||+|+.... .+.....+++|+.++..+++++
T Consensus 55 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 128 (256)
T PRK09186 55 KKLSLVELDITDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQF 128 (256)
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHH
Confidence 35677899999974 233332 248999999974321 1234456788998887776665
Q ss_pred Hh----cCCCceEEEEeCCccccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 368 HE----MTHLEALIHVSTAYCNCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 368 ~~----~~~~~r~v~~SS~~~~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.. .+ .+++|++||.++.... ....|+ .+..+...|+.+|...|.+.+.
T Consensus 129 ~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~---~~~~~~~~Y~~sK~a~~~l~~~ 181 (256)
T PRK09186 129 AKYFKKQG-GGNLVNISSIYGVVAPKFEIYEG---TSMTSPVEYAAIKAGIIHLTKY 181 (256)
T ss_pred HHHHHhcC-CceEEEEechhhhccccchhccc---cccCCcchhHHHHHHHHHHHHH
Confidence 43 34 5799999997654321 122222 1222223577788777776653
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00023 Score=66.01 Aligned_cols=97 Identities=15% Similarity=0.059 Sum_probs=68.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcCCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMTHLE 374 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 374 (422)
.+++++.+|+++++ ++..+.+ ++|++||+|+.... .+..++.+++|+.|+.+++++....+ ..
T Consensus 45 ~~~~~~~~Dl~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g 117 (230)
T PRK07041 45 APVRTAALDITDEA------AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GG 117 (230)
T ss_pred CceEEEEccCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-Ce
Confidence 46889999999874 3444443 57999999987432 13455678999999999999665543 67
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 118 ~iv~~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 118 SLTFVSGFAAVRP------------SASGVLQGAINAALEALARGL 151 (230)
T ss_pred EEEEECchhhcCC------------CCcchHHHHHHHHHHHHHHHH
Confidence 9999998865422 123346777887777766554
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00019 Score=68.26 Aligned_cols=98 Identities=8% Similarity=0.085 Sum_probs=65.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++++. .++|+|||+||.... .++++..+++|+.|+..+++++...
T Consensus 44 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 117 (258)
T PRK06398 44 NDVDYFKVDVSNKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPY 117 (258)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36889999999974 222222 368999999997432 1344566899999999998887542
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 118 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sKaal~~~~~~l 158 (258)
T PRK06398 118 MLKQDKGVIINIASVQSFAV------------TRNAAAYVTSKHAVLGLTRSI 158 (258)
T ss_pred HHHcCCeEEEEeCcchhccC------------CCCCchhhhhHHHHHHHHHHH
Confidence 12478999999754321 112335677777766666543
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00023 Score=66.54 Aligned_cols=96 Identities=11% Similarity=0.157 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|+++++ ++..++ .++|+|||+||..... +..++.+++|+.|+.++++++..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (239)
T PRK07666 56 VKVVIATADVSDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPS 129 (239)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999874 223332 3789999999875321 23456689999999999988863
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+ .+++|++||..+.... .+...|+.+|...+.+.+.
T Consensus 130 ~~~~~-~~~iv~~ss~~~~~~~------------~~~~~Y~~sK~a~~~~~~~ 169 (239)
T PRK07666 130 MIERQ-SGDIINISSTAGQKGA------------AVTSAYSASKFGVLGLTES 169 (239)
T ss_pred HHhCC-CcEEEEEcchhhccCC------------CCCcchHHHHHHHHHHHHH
Confidence 33 5789999997543221 1223466666665555543
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00016 Score=68.34 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=65.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccChh---------hhHHHHHHhhHHHHHHHHHHHHhc--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKFD---------EALKLSVTINMLGTKRLVELCHEM-- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~~~-- 370 (422)
.++.++.+|+++++-. ...++.+. ..+|+|||+||..... +.+++.+++|+.|+.++++++...
T Consensus 56 ~~~~~~~~Dl~~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (255)
T PRK05717 56 ENAWFIAMDVADEAQV--AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR 133 (255)
T ss_pred CceEEEEccCCCHHHH--HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4678899999987411 00112222 3579999999975321 234567899999999999999641
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....++|++||..+.... | ....|+.+|...|.+.+.+
T Consensus 134 ~~~g~ii~~sS~~~~~~~----------~--~~~~Y~~sKaa~~~~~~~l 171 (255)
T PRK05717 134 AHNGAIVNLASTRARQSE----------P--DTEAYAASKGGLLALTHAL 171 (255)
T ss_pred HcCcEEEEEcchhhcCCC----------C--CCcchHHHHHHHHHHHHHH
Confidence 113579999987543211 1 1234777887777766654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00018 Score=67.00 Aligned_cols=96 Identities=10% Similarity=0.126 Sum_probs=62.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ ++..+ ..++|+|||+||..... +..++.++.|+.|+.++++.+.
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 127 (246)
T PRK05653 54 GEARVLVFDVSDEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPP 127 (246)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999874 22222 23579999999875431 2345568899999999998885
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.+ .+++|++||..+... ..+...|..+|...|.+.+.
T Consensus 128 l~~~~-~~~ii~~ss~~~~~~------------~~~~~~y~~sk~~~~~~~~~ 167 (246)
T PRK05653 128 MIKAR-YGRIVNISSVSGVTG------------NPGQTNYSAAKAGVIGFTKA 167 (246)
T ss_pred HHhcC-CcEEEEECcHHhccC------------CCCCcHhHhHHHHHHHHHHH
Confidence 344 689999998644211 12233455666655555444
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00021 Score=67.61 Aligned_cols=97 Identities=15% Similarity=0.109 Sum_probs=62.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHH----HHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLV----ELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll----~~a 367 (422)
++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+..+. +..
T Consensus 52 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 125 (255)
T PRK06463 52 GVFTIKCDVGNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLL 125 (255)
T ss_pred CCeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 4778999999874 223322 368999999987431 1234566899999965554 444
Q ss_pred HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+++.. ......|+.+|...+.+.+.+
T Consensus 126 ~~~~-~g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~l 166 (255)
T PRK06463 126 KLSK-NGAIVNIASNAGIGTA-----------AEGTTFYAITKAGIIILTRRL 166 (255)
T ss_pred HhcC-CcEEEEEcCHHhCCCC-----------CCCccHhHHHHHHHHHHHHHH
Confidence 4333 4689999997665321 111235777888777776654
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00022 Score=66.46 Aligned_cols=97 Identities=11% Similarity=0.130 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.+++++.+|+++++ ++..++ .++|+|||+|+.... .+..++.+++|+.|+.++++++.+.
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (237)
T PRK07326 54 GNVLGLAADVRDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127 (237)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 56889999999874 222222 378999999987542 1234456899999999999888642
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+.+++|++||..+.. |....+.|..+|+..+.+.+.
T Consensus 128 ~~~~~~~iv~~ss~~~~~------------~~~~~~~y~~sk~a~~~~~~~ 166 (237)
T PRK07326 128 LKRGGGYIINISSLAGTN------------FFAGGAAYNASKFGLVGFSEA 166 (237)
T ss_pred HHHCCeEEEEECChhhcc------------CCCCCchHHHHHHHHHHHHHH
Confidence 1246899999875432 112234566677655555443
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00021 Score=68.59 Aligned_cols=97 Identities=7% Similarity=0.028 Sum_probs=65.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|++|++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 66 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 139 (280)
T PLN02253 66 PNVCFFHCDVTVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA 139 (280)
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 46889999999974 233332 368999999997531 13445679999999999999876
Q ss_pred hc---CCCceEEEEeCCccc-cCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM---THLEALIHVSTAYCN-CDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~---~~~~r~v~~SS~~~~-g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+-.+++++||..+. +.. . ...|+.+|...|.+.+.+
T Consensus 140 ~~~~~~~~g~ii~isS~~~~~~~~----------~---~~~Y~~sK~a~~~~~~~l 182 (280)
T PLN02253 140 RIMIPLKKGSIVSLCSVASAIGGL----------G---PHAYTGSKHAVLGLTRSV 182 (280)
T ss_pred HHHHhcCCceEEEecChhhcccCC----------C---CcccHHHHHHHHHHHHHH
Confidence 42 113478998886442 210 0 125778888888777654
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00022 Score=67.00 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=66.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cC-ccEEEEcccccC---------h----hhhHHHHHHhhHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QN-VSVVFHSAATVK---------F----DEALKLSVTINMLGTKRL 363 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~-~d~ViH~Aa~~~---------~----~~~~~~~~~~Nv~gt~~l 363 (422)
.++.++.+|+++++ ++..++ .+ +|+|||+|+... + .+...+.+++|+.|+.++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 125 (253)
T PRK08642 52 DRAIALQADVTDRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT 125 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence 46888999999864 223322 23 899999997521 1 123445689999999999
Q ss_pred HHHHHhc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 364 VELCHEM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 364 l~~a~~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++++... .+..++|++||.... .|..|+..|+.+|...|.+++.+
T Consensus 126 ~~~~~~~~~~~~~g~iv~iss~~~~------------~~~~~~~~Y~~sK~a~~~l~~~l 173 (253)
T PRK08642 126 IQAALPGMREQGFGRIINIGTNLFQ------------NPVVPYHDYTTAKAALLGLTRNL 173 (253)
T ss_pred HHHHHHHHHhcCCeEEEEECCcccc------------CCCCCccchHHHHHHHHHHHHHH
Confidence 9998631 124689999985321 13334457888888888887765
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00024 Score=67.24 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=67.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh---h---hhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF---D---EALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~---~---~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
.++.++.+|+++++ +..++ ..++|+|||+||.... . +.++..+++|+.|+.++++++..
T Consensus 60 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (255)
T PRK06113 60 GQAFACRCDITSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35778899999874 22222 2367999999997532 1 34455689999999999999863
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||.++.. |..+...|+.+|...|.+++.+
T Consensus 134 ~~~~-~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 173 (255)
T PRK06113 134 EKNG-GGVILTITSMAAEN------------KNINMTSYASSKAAASHLVRNM 173 (255)
T ss_pred HhcC-CcEEEEEecccccC------------CCCCcchhHHHHHHHHHHHHHH
Confidence 22 35899999975421 2223346888888888877654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00025 Score=66.92 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=66.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.+++++.+|+++++ ++++++ .++|+|||+||.... .+..+..+++|+.|+.++++++...
T Consensus 47 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 120 (252)
T PRK07856 47 RPAEFHAADVRDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAV 120 (252)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999873 233332 357999999986431 1234566899999999999988641
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++..++|++||..+... ......|..+|...|.+++.+
T Consensus 121 ~~~~~~~g~ii~isS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~l 162 (252)
T PRK07856 121 MQQQPGGGSIVNIGSVSGRRP------------SPGTAAYGAAKAGLLNLTRSL 162 (252)
T ss_pred HHhcCCCcEEEEEcccccCCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 12368999999754321 112346777787777776654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00019 Score=67.30 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=66.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHH-Hh------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKI-LK------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~-~~------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++.. . .-+.. +. ...|++||+||.... .+.+++.+++|+.|+..+.+.+.+
T Consensus 45 ~~~~~~~~D~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (243)
T PRK07023 45 ERLAEVELDLSDAAAA-A-AWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQ 122 (243)
T ss_pred CeEEEEEeccCCHHHH-H-HHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHH
Confidence 4688899999997421 0 00111 11 257899999987542 133456688999997777666553
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..+.. |..+.+.|+.+|...|.+++.+
T Consensus 123 ~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~ 164 (243)
T PRK07023 123 AASDAAERRILHISSGAARN------------AYAGWSVYCATKAALDHHARAV 164 (243)
T ss_pred HhhccCCCEEEEEeChhhcC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 2 1246899999975431 3334667888998888888755
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00029 Score=65.84 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=66.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++++++ .++|+|||+||.... .+..+..+++|+.|+.++++++.+.
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (245)
T PRK12937 55 GRAIAVQADVADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH 128 (245)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence 46889999999874 233332 368999999997532 1234556889999999999888653
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....++|++||..+.. |..+...|+.+|...|.+++.+
T Consensus 129 ~~~~~~iv~~ss~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~ 167 (245)
T PRK12937 129 LGQGGRIINLSTSVIAL------------PLPGYGPYAASKAAVEGLVHVL 167 (245)
T ss_pred hccCcEEEEEeeccccC------------CCCCCchhHHHHHHHHHHHHHH
Confidence 1125899998864321 1112346778888877776654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00022 Score=67.52 Aligned_cols=96 Identities=9% Similarity=0.053 Sum_probs=64.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHH----
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVEL---- 366 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~---- 366 (422)
++.++.+|+++++ ++.++. ..+|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 51 ~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~ 124 (257)
T PRK07024 51 RVSVYAADVRDAD------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP 124 (257)
T ss_pred eeEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH
Confidence 6889999999974 222222 247999999986431 123456789999999998774
Q ss_pred HHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++.+ ..++|++||..+.... | ....|+.+|...|.+.+.+
T Consensus 125 ~~~~~-~~~iv~isS~~~~~~~----------~--~~~~Y~asK~a~~~~~~~l 165 (257)
T PRK07024 125 MRAAR-RGTLVGIASVAGVRGL----------P--GAGAYSASKAAAIKYLESL 165 (257)
T ss_pred HHhcC-CCEEEEEechhhcCCC----------C--CCcchHHHHHHHHHHHHHH
Confidence 34444 5789999987543111 1 1235788888887777654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00027 Score=66.94 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=64.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH----hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL----KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE---- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~----~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---- 369 (422)
.++.++.+|+++++-. .+.+... ..++|+|||+||.... .+..++.+++|+.|+.++++++.+
T Consensus 48 ~~~~~~~~D~~~~~~v--~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 125 (260)
T PRK08267 48 GNAWTGALDVTDRAAW--DAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA 125 (260)
T ss_pred CceEEEEecCCCHHHH--HHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4688999999987411 0111112 2357999999997542 134456799999999999988853
Q ss_pred cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+..... ....|+.+|...|.+.+.+
T Consensus 126 ~~-~~~iv~isS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l 163 (260)
T PRK08267 126 TP-GARVINTSSASAIYGQP------------GLAVYSATKFAVRGLTEAL 163 (260)
T ss_pred CC-CCEEEEeCchhhCcCCC------------CchhhHHHHHHHHHHHHHH
Confidence 22 46899999974432110 1235666776666555543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00038 Score=65.24 Aligned_cols=96 Identities=11% Similarity=0.047 Sum_probs=61.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++..+.+|++|.+ +++++ ..++|+|||+||.... .+.+++.+++|+.|+.++.+++.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (246)
T PRK12938 53 FDFIASEGNVGDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDG 126 (246)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35778899999874 22222 2468999999997531 13445668999999777666553
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.+ ..++|++||.++... ...+..|..+|...|.+.+.
T Consensus 127 ~~~~~-~~~iv~isS~~~~~~------------~~~~~~y~~sK~a~~~~~~~ 166 (246)
T PRK12938 127 MVERG-WGRIINISSVNGQKG------------QFGQTNYSTAKAGIHGFTMS 166 (246)
T ss_pred HHHcC-CeEEEEEechhccCC------------CCCChhHHHHHHHHHHHHHH
Confidence 333 578999999754311 11234566667655555443
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00045 Score=65.15 Aligned_cols=96 Identities=13% Similarity=0.084 Sum_probs=63.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----HhcCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC----HEMTH 372 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 372 (422)
.++.++.+|++|++ ++..+.. ++|+|||+||.... .+..+..+++|+.|+.++.+.+ ++.+
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~- 123 (257)
T PRK09291 51 LALRVEKLDLTDAI------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG- 123 (257)
T ss_pred CcceEEEeeCCCHH------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 35888999999973 3444444 89999999986531 1234456889999987776544 4444
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+++|++||..+.... | ....|+.+|...|.+.+.
T Consensus 124 ~~~iv~~SS~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~ 158 (257)
T PRK09291 124 KGKVVFTSSMAGLITG----------P--FTGAYCASKHALEAIAEA 158 (257)
T ss_pred CceEEEEcChhhccCC----------C--CcchhHHHHHHHHHHHHH
Confidence 5799999997543211 1 123566777777766543
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00029 Score=66.55 Aligned_cols=98 Identities=7% Similarity=0.035 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. ..+|+|||+||..... +..++.+++|+.|+.++++++.+.
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (255)
T PRK07523 59 LSAHALAFDVTDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARH 132 (255)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35788999999874 233332 3589999999975321 233556889999999999998753
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.+++|++||..+.. |...+..|+.+|...|.+++.+
T Consensus 133 ~~~~~~g~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~~~~~~ 173 (255)
T PRK07523 133 MIARGAGKIINIASVQSAL------------ARPGIAPYTATKGAVGNLTKGM 173 (255)
T ss_pred HHHhCCeEEEEEccchhcc------------CCCCCccHHHHHHHHHHHHHHH
Confidence 1257899999864321 1112445677777766665544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00029 Score=67.78 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=52.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ ++..+. .++|+|||+||.... .+..+..+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~ 128 (275)
T PRK05876 55 FDVHGVMCDVRHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPR 128 (275)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 35788999999974 233332 357999999997431 133455689999999999998752
Q ss_pred ---cCCCceEEEEeCCccc
Q psy16526 370 ---MTHLEALIHVSTAYCN 385 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~ 385 (422)
.+...++|++||..+.
T Consensus 129 m~~~~~~g~iv~isS~~~~ 147 (275)
T PRK05876 129 LLEQGTGGHVVFTASFAGL 147 (275)
T ss_pred HHhcCCCCEEEEeCChhhc
Confidence 2213589999997654
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00046 Score=64.79 Aligned_cols=102 Identities=14% Similarity=-0.023 Sum_probs=63.8
Q ss_pred CcEEEEeCcCCCCCCCCCH--HHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH----hcC
Q psy16526 305 AKIKPILGDITEPELGISQ--NDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH----EMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~ 371 (422)
.++.++.+|+++++.. .+ +.......++|+|||+||..... +..+..+++|+.|+.++++++. +.+
T Consensus 53 ~~~~~~~~D~~~~~~~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 131 (248)
T PRK08251 53 IKVAVAALDVNDHDQV-FEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG 131 (248)
T ss_pred ceEEEEEcCCCCHHHH-HHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 4688999999997411 00 00111224689999999865321 2334568899999999998875 333
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
..++|++||..+.... +. +...|+.+|...+.+.+.
T Consensus 132 -~~~iv~~sS~~~~~~~--------~~---~~~~Y~~sK~a~~~~~~~ 167 (248)
T PRK08251 132 -SGHLVLISSVSAVRGL--------PG---VKAAYAASKAGVASLGEG 167 (248)
T ss_pred -CCeEEEEeccccccCC--------CC---CcccHHHHHHHHHHHHHH
Confidence 5789999997443211 11 234567777766665544
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00032 Score=68.86 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=69.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh------hhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD------EALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
.++.++.+|++|.+ +.+.+ ..++|++||+||..... +..+..+.+|+.|...+.+.+..
T Consensus 65 ~~v~~~~~Dl~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l 138 (313)
T PRK05854 65 AKLSLRALDLSSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLL 138 (313)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHH
Confidence 36889999999874 22222 23589999999975421 33456689999998877777652
Q ss_pred -cCCCceEEEEeCCccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 -MTHLEALIHVSTAYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 -~~~~~r~v~~SS~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||....... ....+ ..+..+...|+.+|...+.+...+
T Consensus 139 ~~~-~~riv~vsS~~~~~~~~~~~~~~~---~~~~~~~~~Y~~SK~a~~~~~~~l 189 (313)
T PRK05854 139 RAG-RARVTSQSSIAARRGAINWDDLNW---ERSYAGMRAYSQSKIAVGLFALEL 189 (313)
T ss_pred HhC-CCCeEEEechhhcCCCcCcccccc---cccCcchhhhHHHHHHHHHHHHHH
Confidence 22 3589999997443221 11222 235566778899998877766544
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0003 Score=65.94 Aligned_cols=98 Identities=8% Similarity=0.078 Sum_probs=66.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|+|||+||.... .+..+..++.|+.|+.++++++...
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (250)
T PRK12939 56 GRAHAIAADLADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH 129 (250)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999874 223222 468999999987532 1234556889999999999988642
Q ss_pred C---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- +..++|++||..+... ...++.|..+|...|.++..+
T Consensus 130 ~~~~~~g~iv~isS~~~~~~------------~~~~~~y~~sK~~~~~~~~~l 170 (250)
T PRK12939 130 LRDSGRGRIVNLASDTALWG------------APKLGAYVASKGAVIGMTRSL 170 (250)
T ss_pred HHHcCCeEEEEECchhhccC------------CCCcchHHHHHHHHHHHHHHH
Confidence 1 1358999999654321 112346777888777776644
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00034 Score=67.00 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=65.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh----------------------hhhHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF----------------------DEALKLSVTI 355 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~----------------------~~~~~~~~~~ 355 (422)
.++.++.+|+++++ ++..+ ..++|+|||+||.... .+.++..+++
T Consensus 59 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (278)
T PRK08277 59 GEALAVKADVLDKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDL 132 (278)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhh
Confidence 35788999999874 22222 2478999999995421 1334566899
Q ss_pred hHHHHHHHHHHHH----hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 356 NMLGTKRLVELCH----EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 356 Nv~gt~~ll~~a~----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|+.|+..+++++. +.+ ..++|++||..++. |..+...|+.+|...|.+++.+
T Consensus 133 n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~l 188 (278)
T PRK08277 133 NLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFT------------PLTKVPAYSAAKAAISNFTQWL 188 (278)
T ss_pred hhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcC------------CCCCCchhHHHHHHHHHHHHHH
Confidence 9999987766543 333 46899999976542 1223346888888887777654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00033 Score=65.14 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=63.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
++.++.+|++|++ +++.++ ..+|+|||+||.... .+..++.+++|+.|+.++++++...
T Consensus 49 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 122 (239)
T TIGR01830 49 KALGVVCDVSDRE------DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIM 122 (239)
T ss_pred ceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5788999999874 223332 357999999997532 1344566899999999999998752
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+.++++++||..+..... +...|+.+|.+.|.+.+.
T Consensus 123 ~~~~~~~~v~~sS~~~~~g~~------------~~~~y~~~k~a~~~~~~~ 161 (239)
T TIGR01830 123 IKQRSGRIINISSVVGLMGNA------------GQANYAASKAGVIGFTKS 161 (239)
T ss_pred HhcCCeEEEEECCccccCCCC------------CCchhHHHHHHHHHHHHH
Confidence 1256899999964332110 123466677666655544
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00038 Score=65.48 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=66.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++++|+++++ ++++++ .++|+|||+|+..... +.++..+++|+.|+.++++++..
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (252)
T PRK08220 48 YPFATFVLDVSDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQ 121 (252)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999874 233333 3479999999975421 34456789999999999999853
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |..+...|+.+|...|.+++.+
T Consensus 122 ~~~~~-~g~iv~~ss~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 122 FRRQR-SGAIVTVGSNAAHV------------PRIGMAAYGASKAALTSLAKCV 162 (252)
T ss_pred HHhCC-CCEEEEECCchhcc------------CCCCCchhHHHHHHHHHHHHHH
Confidence 22 45899999864421 2223456777777777776544
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00032 Score=65.59 Aligned_cols=96 Identities=10% Similarity=0.105 Sum_probs=64.9
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc----CC
Q psy16526 307 IKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM----TH 372 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~----~~ 372 (422)
..++.+|+++++ ++..+. .++|+|||+||..... +..++.+++|+.|+.++++++.+. +.
T Consensus 55 ~~~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (245)
T PRK07060 55 CEPLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR 128 (245)
T ss_pred CeEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 467889998863 233333 3589999999875421 234556789999999999988753 11
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||..++... .+...|..+|...|.+++.+
T Consensus 129 ~~~iv~~sS~~~~~~~------------~~~~~y~~sK~a~~~~~~~~ 164 (245)
T PRK07060 129 GGSIVNVSSQAALVGL------------PDHLAYCASKAALDAITRVL 164 (245)
T ss_pred CcEEEEEccHHHcCCC------------CCCcHhHHHHHHHHHHHHHH
Confidence 3689999997554221 12345778888777776654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00032 Score=67.45 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=53.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc-CCCceEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM-THLEALI 377 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v 377 (422)
.++.++.+|++|++ +++.+. .++|++||+||......++++.+++|+.|+.++++++... ..-.+.|
T Consensus 49 ~~~~~~~~Dv~d~~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv 122 (275)
T PRK06940 49 FDVSTQEVDVSSRE------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGV 122 (275)
T ss_pred CeEEEEEeecCCHH------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEE
Confidence 36788999999974 222222 3689999999986555567778999999999999998653 1113467
Q ss_pred EEeCCcc
Q psy16526 378 HVSTAYC 384 (422)
Q Consensus 378 ~~SS~~~ 384 (422)
++||..+
T Consensus 123 ~isS~~~ 129 (275)
T PRK06940 123 VIASQSG 129 (275)
T ss_pred EEEeccc
Confidence 7777643
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00037 Score=65.18 Aligned_cols=96 Identities=10% Similarity=-0.014 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|+++++ ++..++ .++|+|||+||..... +..+..+++|+.|+.++++.+.
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (241)
T PRK07454 55 VKAAAYSIDLSNPE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG 128 (241)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46889999999974 222222 3589999999864321 2345668899999999887763
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.+ ..++|++||..+++.. .+...|..+|...+.+.+.
T Consensus 129 ~~~~~-~~~iv~isS~~~~~~~------------~~~~~Y~~sK~~~~~~~~~ 168 (241)
T PRK07454 129 MRARG-GGLIINVSSIAARNAF------------PQWGAYCVSKAALAAFTKC 168 (241)
T ss_pred HHhcC-CcEEEEEccHHhCcCC------------CCccHHHHHHHHHHHHHHH
Confidence 333 5789999998654321 1233567777776665543
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00054 Score=63.92 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=63.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+. .++|+|||+||..... +..++.+++|+.|+.++++++...
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (248)
T PRK05557 55 GKALAVQGDVSDAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP 128 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56889999999874 222222 3689999999875321 234456889999999999998753
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+.+++|++||........ ....|..+|.+.|.+++.
T Consensus 129 ~~~~~~~~~v~iss~~~~~~~~------------~~~~y~~sk~a~~~~~~~ 168 (248)
T PRK05557 129 MMKQRSGRIINISSVVGLMGNP------------GQANYAASKAGVIGFTKS 168 (248)
T ss_pred HHhcCCeEEEEEcccccCcCCC------------CCchhHHHHHHHHHHHHH
Confidence 1256899999873321110 123456667666655543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00024 Score=67.22 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=64.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (257)
T PRK07067 52 PAAIAVSLDVTRQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARH 125 (257)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 35788999999874 222222 368999999987532 1345566899999999999998642
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.-.++|++||..+... ..+...|+.+|...|.+.+.
T Consensus 126 ~~~~~~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 166 (257)
T PRK07067 126 MVEQGRGGKIINMASQAGRRG------------EALVSHYCATKAAVISYTQS 166 (257)
T ss_pred HHhcCCCcEEEEeCCHHhCCC------------CCCCchhhhhHHHHHHHHHH
Confidence 11247999999643211 11334567777766666554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00031 Score=61.46 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=65.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++.++ ..+|.|||+|+..... +.++..+++|+.|+.++++++++.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (180)
T smart00822 53 AEVTVVACDVADRA------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL 126 (180)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC
Confidence 46778999998863 222222 3469999999864321 334566899999999999999876
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+ .++++++||..+.-. ......|..+|...+.+++.
T Consensus 127 ~-~~~ii~~ss~~~~~~------------~~~~~~y~~sk~~~~~~~~~ 162 (180)
T smart00822 127 P-LDFFVLFSSVAGVLG------------NPGQANYAAANAFLDALAAH 162 (180)
T ss_pred C-cceEEEEccHHHhcC------------CCCchhhHHHHHHHHHHHHH
Confidence 5 688999998643211 01234567777777776654
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00052 Score=64.65 Aligned_cols=97 Identities=20% Similarity=0.201 Sum_probs=65.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-----h---hhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-----D---EALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-----~---~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++++|+++.+ +.+.+ ...+|+|||+||.... . +..+..+++|+.|+..+++++.
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (252)
T PRK07035 57 GKAEALACHIGEME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGK 130 (252)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35678899999874 22222 2358999999985321 1 2344568899999998887763
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..+++++||.++.. |..+.+.|+.+|.+.|.+++.+
T Consensus 131 ~~~~~~-~~~iv~~sS~~~~~------------~~~~~~~Y~~sK~al~~~~~~l 172 (252)
T PRK07035 131 LMKEQG-GGSIVNVASVNGVS------------PGDFQGIYSITKAAVISMTKAF 172 (252)
T ss_pred HHHhCC-CcEEEEECchhhcC------------CCCCCcchHHHHHHHHHHHHHH
Confidence 333 57899999875432 1223456888888888887765
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00052 Score=64.79 Aligned_cols=98 Identities=15% Similarity=0.092 Sum_probs=64.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|+++++ +.+.+. .++|++||+||.... . +..+..+++|+.|+..+.+++.
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 128 (254)
T PRK07478 55 GEAVALAGDVRDEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIP 128 (254)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45788999999874 222222 368999999997431 1 2345668999988887766543
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... +......|+.+|...+.+.+.+
T Consensus 129 ~l~~~~-~~~iv~~sS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~l 171 (254)
T PRK07478 129 AMLARG-GGSLIFTSTFVGHTA-----------GFPGMAAYAASKAGLIGLTQVL 171 (254)
T ss_pred HHHhcC-CceEEEEechHhhcc-----------CCCCcchhHHHHHHHHHHHHHH
Confidence 333 468999999755421 1112446788888777776654
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00058 Score=63.79 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=64.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----Hhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC----HEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 370 (422)
.++.++.+|+++++-. . +.++.+ ..++|+|||+||.... .+..++.+++|+.|+.++.+++ ++.
T Consensus 52 ~~~~~~~~D~~~~~~v-~-~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12824 52 DQVRLKELDVTDTEEC-A-EALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ 129 (245)
T ss_pred CeEEEEEcCCCCHHHH-H-HHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 4688999999997411 0 011111 2358999999986531 1344566889999999985544 444
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||..+.... | ....|..+|...+.+.+.+
T Consensus 130 ~-~~~iv~iss~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~l 166 (245)
T PRK12824 130 G-YGRIINISSVNGLKGQ----------F--GQTNYSAAKAGMIGFTKAL 166 (245)
T ss_pred C-CeEEEEECChhhccCC----------C--CChHHHHHHHHHHHHHHHH
Confidence 4 6799999997554221 1 1235777777666665543
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00059 Score=63.37 Aligned_cols=93 Identities=8% Similarity=-0.001 Sum_probs=61.4
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH----hc
Q psy16526 308 KPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH----EM 370 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~ 370 (422)
+++.+|+++++ +.+.+++ ++|+|||+||..... +.....+++|+.|+.++.+++. +.
T Consensus 44 ~~~~~D~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 117 (234)
T PRK07577 44 ELFACDLADIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR 117 (234)
T ss_pred eEEEeeCCCHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57889999874 2233222 689999999975421 2344568899999888877664 33
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||...++.. ....|..+|...|.+.+.+
T Consensus 118 ~-~~~iv~~sS~~~~~~~-------------~~~~Y~~sK~a~~~~~~~~ 153 (234)
T PRK07577 118 E-QGRIVNICSRAIFGAL-------------DRTSYSAAKSALVGCTRTW 153 (234)
T ss_pred C-CcEEEEEccccccCCC-------------CchHHHHHHHHHHHHHHHH
Confidence 3 5799999997544321 1235777777766666543
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00059 Score=63.97 Aligned_cols=103 Identities=15% Similarity=0.078 Sum_probs=64.8
Q ss_pred CcEEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc-CCCce
Q psy16526 305 AKIKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM-THLEA 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r 375 (422)
.++.++++|+++.+-... .+.......++|+|||+||..... +.++..+++|+.|+.++++++... ....+
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 131 (249)
T PRK06500 52 ESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPAS 131 (249)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence 357788999998631100 001111224689999999875421 334567899999999999999752 11346
Q ss_pred EEEEeCCcc-ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYC-NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~-~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|++||..+ +|. ...+.|+.+|...|.+++.+
T Consensus 132 ~i~~~S~~~~~~~-------------~~~~~Y~~sK~a~~~~~~~l 164 (249)
T PRK06500 132 IVLNGSINAHIGM-------------PNSSVYAASKAALLSLAKTL 164 (249)
T ss_pred EEEEechHhccCC-------------CCccHHHHHHHHHHHHHHHH
Confidence 777777532 221 12346888888888777544
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00036 Score=65.21 Aligned_cols=74 Identities=18% Similarity=0.287 Sum_probs=52.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.+++++.+|+++.+ +++.+ ..++|+|||+||.... .+.+++.+++|+.|+.++++++.+.
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (245)
T PRK12936 52 ERVKIFPANLSDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP 125 (245)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46788999999864 22322 2468999999997532 1345567899999999998887531
Q ss_pred ---CCCceEEEEeCCcc
Q psy16526 371 ---THLEALIHVSTAYC 384 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~ 384 (422)
.+..++|++||..+
T Consensus 126 ~~~~~~~~iv~~sS~~~ 142 (245)
T PRK12936 126 MMRRRYGRIINITSVVG 142 (245)
T ss_pred HHHhCCCEEEEECCHHh
Confidence 12578999999644
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00046 Score=65.15 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=66.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++ +++.+ ..++|+|||+|+.... .+.++..+++|+.|+..+++++..
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (258)
T PRK07890 54 RRALAVPTDITDED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP 127 (258)
T ss_pred CceEEEecCCCCHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46789999999874 22222 2468999999986421 134456689999999999999975
Q ss_pred c--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +...++|++||..+.. |..+...|..+|...|.+++.+
T Consensus 128 ~~~~~~~~ii~~sS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~~ 168 (258)
T PRK07890 128 ALAESGGSIVMINSMVLRH------------SQPKYGAYKMAKGALLAASQSL 168 (258)
T ss_pred HHHhCCCEEEEEechhhcc------------CCCCcchhHHHHHHHHHHHHHH
Confidence 2 1125899999975431 1122345777777777766654
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00073 Score=64.00 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=65.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..++ .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (260)
T PRK07063 58 ARVLAVPADVTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPG 131 (260)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46888999999874 233332 368999999996432 1344566899999999998887531
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 132 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l 172 (260)
T PRK07063 132 MVERGRGSIVNIASTHAFKI------------IPGCFPYPVAKHGLLGLTRAL 172 (260)
T ss_pred HHhhCCeEEEEECChhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 12468999999754321 112335777777777666554
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0007 Score=64.12 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=64.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|+++++ +...++ .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 63 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 136 (258)
T PRK06935 63 RKVTFVQVDLTKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV 136 (258)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 46889999999874 223332 368999999997531 134456689999998888776653
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..++... .....|+.+|...|.+++.+
T Consensus 137 ~~~~~-~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 177 (258)
T PRK06935 137 MAKQG-SGKIINIASMLSFQGG------------KFVPAYTASKHGVAGLTKAF 177 (258)
T ss_pred HHhcC-CeEEEEECCHHhccCC------------CCchhhHHHHHHHHHHHHHH
Confidence 33 4689999997554221 11235777777777776654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00077 Score=65.48 Aligned_cols=98 Identities=12% Similarity=0.131 Sum_probs=64.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh---------hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD---------EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|++|++ ++..++ .++|+|||+||..... +..+..+++|+.|+.++++++.
T Consensus 89 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 162 (293)
T PRK05866 89 GDAMAVPCDLSDLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162 (293)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778999999874 233333 3789999999875321 2234568899999888887764
Q ss_pred ----hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ----EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.+.. .| ..+.|+.+|...+.+++.+
T Consensus 163 ~~~~~~~-~g~iv~isS~~~~~~~---------~p--~~~~Y~asKaal~~l~~~l 206 (293)
T PRK05866 163 PGMLERG-DGHIINVATWGVLSEA---------SP--LFSVYNASKAALSAVSRVI 206 (293)
T ss_pred HHHHhcC-CcEEEEECChhhcCCC---------CC--CcchHHHHHHHHHHHHHHH
Confidence 333 5789999996543211 11 1246777888777666554
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00058 Score=64.59 Aligned_cols=98 Identities=5% Similarity=0.049 Sum_probs=65.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++..+++|++|++ +.+.++ .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (253)
T PRK08993 57 RRFLSLTADLRKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKH 130 (253)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 45788999999863 222222 368999999997532 1345667999999999999987542
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.++|++||..+..... ....|+.+|...|.+.+.+
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l 172 (253)
T PRK08993 131 FIAQGNGGKIINIASMLSFQGGI------------RVPSYTASKSGVMGVTRLM 172 (253)
T ss_pred HHhCCCCeEEEEECchhhccCCC------------CCcchHHHHHHHHHHHHHH
Confidence 1125799999976543211 0125677777766666544
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00083 Score=63.41 Aligned_cols=102 Identities=15% Similarity=0.185 Sum_probs=62.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM---- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 370 (422)
.++.++.+|+++++-. .+.++++ ..++|+|||+||.... .+..+..+++|+.|+..+++++...
T Consensus 51 ~~~~~~~~Dl~~~~~~--~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (256)
T PRK08643 51 GKAIAVKADVSDRDQV--FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL 128 (256)
T ss_pred CeEEEEECCCCCHHHH--HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 4678899999997411 0111222 2368999999986431 1234566889999998887777542
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+.... | ....|+.+|...|.+.+.+
T Consensus 129 ~~~~~iv~~sS~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~l 166 (256)
T PRK08643 129 GHGGKIINATSQAGVVGN----------P--ELAVYSSTKFAVRGLTQTA 166 (256)
T ss_pred CCCCEEEEECccccccCC----------C--CCchhHHHHHHHHHHHHHH
Confidence 213579999986432111 1 1235777777666655543
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00079 Score=63.72 Aligned_cols=99 Identities=11% Similarity=0.070 Sum_probs=61.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHH----h
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCH----E 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~----~ 369 (422)
.++.++.+|+++++-. ...++.+ ..++|++||+||... + .+..+..+++|+.|+..+++.+. +
T Consensus 56 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (260)
T PRK12823 56 GEALALTADLETYAGA--QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA 133 (260)
T ss_pred CeEEEEEEeCCCHHHH--HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4577899999986311 0111121 236899999998531 1 12344557899998886665554 4
Q ss_pred cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+++. + ...|+.+|...|.+.+.+
T Consensus 134 ~~-~g~iv~~sS~~~~~~-----------~---~~~Y~~sK~a~~~~~~~l 169 (260)
T PRK12823 134 QG-GGAIVNVSSIATRGI-----------N---RVPYSAAKGGVNALTASL 169 (260)
T ss_pred cC-CCeEEEEcCccccCC-----------C---CCccHHHHHHHHHHHHHH
Confidence 33 468999999765421 1 124777887777776654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00067 Score=62.95 Aligned_cols=73 Identities=7% Similarity=0.055 Sum_probs=52.0
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
+.+++.+|++|.+ ++..+. .++|+|||+|+.... .+.+.+.+++|+.|+.++++++.+
T Consensus 55 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (239)
T PRK12828 55 ALRIGGIDLVDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPAL 128 (239)
T ss_pred CceEEEeecCCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHH
Confidence 4677889998863 223322 368999999986431 123445688999999999988753
Q ss_pred --cCCCceEEEEeCCccc
Q psy16526 370 --MTHLEALIHVSTAYCN 385 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~ 385 (422)
.+ .+++|++||..++
T Consensus 129 ~~~~-~~~iv~~sS~~~~ 145 (239)
T PRK12828 129 TASG-GGRIVNIGAGAAL 145 (239)
T ss_pred HhcC-CCEEEEECchHhc
Confidence 33 7899999997654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00074 Score=63.64 Aligned_cols=98 Identities=9% Similarity=0.122 Sum_probs=63.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++.+. .++|+|||+||..... +..++.+++|+.|+.++++++...
T Consensus 61 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (255)
T PRK06841 61 GNAKGLVCDVSDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRH 134 (255)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHH
Confidence 35678999999874 222222 3689999999975421 234456899999999999998642
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... .....|+.+|...|.+.+.+
T Consensus 135 ~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 175 (255)
T PRK06841 135 MIAAGGGKIVNLASQAGVVAL------------ERHVAYCASKAGVVGMTKVL 175 (255)
T ss_pred HHhcCCceEEEEcchhhccCC------------CCCchHHHHHHHHHHHHHHH
Confidence 125789999997442111 01234666776666555543
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00056 Score=74.61 Aligned_cols=81 Identities=11% Similarity=0.179 Sum_probs=56.3
Q ss_pred ccccccceeeEEeecCCcccccchhHHHHHH-HHHHHHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 41 IAAAGKGFFRTMLCHENKVADLVPVDIVINL-MICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 41 ~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~-~i~aa~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
.+|.++|.++.++..--..+-++|+|...|+ +++..|.....-..+.. .....--|++..+|.+-||-+.++.+.|+.
T Consensus 237 ~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vwgm~~~ylm~yy~ 315 (1108)
T PTZ00374 237 CLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVE-CAAEMQLCGAPGDNSLVWGMVAEYLMDYYG 315 (1108)
T ss_pred HHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhc-chhhheeccCCccceeeHHHHHHHHHHHHh
Confidence 4788899999999999999999999999997 44444432211000000 011123377778999999999999999877
Q ss_pred cCC
Q psy16526 120 QNP 122 (422)
Q Consensus 120 ~~p 122 (422)
+..
T Consensus 316 r~~ 318 (1108)
T PTZ00374 316 RFG 318 (1108)
T ss_pred hhH
Confidence 643
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00085 Score=62.52 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=60.8
Q ss_pred CcEEEEeCcCCCCCCCCCH--HHHHHHhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----HhcC
Q psy16526 305 AKIKPILGDITEPELGISQ--NDQKILKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC----HEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~ 371 (422)
.++.++.+|+++++-. .. +++.+...++|+|||+||.... .+.+++.+++|+.|+..+++.+ ++.+
T Consensus 50 ~~~~~~~~D~~~~~~~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 128 (242)
T TIGR01829 50 FDFRVVEGDVSSFESC-KAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG 128 (242)
T ss_pred CceEEEEecCCCHHHH-HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 4688999999987410 00 0111122468999999986531 1234556889999988765554 4444
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+++|++||.++.... ..+..|..+|...+.+++.
T Consensus 129 -~~~iv~iss~~~~~~~------------~~~~~y~~sk~a~~~~~~~ 163 (242)
T TIGR01829 129 -WGRIINISSVNGQKGQ------------FGQTNYSAAKAGMIGFTKA 163 (242)
T ss_pred -CcEEEEEcchhhcCCC------------CCcchhHHHHHHHHHHHHH
Confidence 6799999997543211 1123466677655555443
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00061 Score=63.64 Aligned_cols=98 Identities=13% Similarity=0.236 Sum_probs=63.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+. .++|+|||+||.... .+..+..+++|+.|+.++++++...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (247)
T PRK05565 55 GDAIAVKADVSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY 128 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999974 223322 278999999997532 1234566899999999988887642
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.+++|++||..+.... | ....|..+|...+.+++.+
T Consensus 129 ~~~~~~~~~v~~sS~~~~~~~----------~--~~~~y~~sK~a~~~~~~~~ 169 (247)
T PRK05565 129 MIKRKSGVIVNISSIWGLIGA----------S--CEVLYSASKGAVNAFTKAL 169 (247)
T ss_pred HHhcCCcEEEEECCHhhccCC----------C--CccHHHHHHHHHHHHHHHH
Confidence 124679999997543221 0 1224666666655555443
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00087 Score=64.97 Aligned_cols=98 Identities=14% Similarity=0.067 Sum_probs=64.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh--------hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD--------EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++ +++.++ .++|+|||+|+..... +.....+++|+.|+.++++++..
T Consensus 96 ~~~~~~~~Dl~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~ 169 (290)
T PRK06701 96 VKCLLIPGDVSDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP 169 (290)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46788999999874 222222 3689999999864321 23355689999999999999976
Q ss_pred c-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ....++|++||..++.... . ...|+.+|...+.+++.+
T Consensus 170 ~~~~~g~iV~isS~~~~~~~~---------~---~~~Y~~sK~a~~~l~~~l 209 (290)
T PRK06701 170 HLKQGSAIINTGSITGYEGNE---------T---LIDYSATKGAIHAFTRSL 209 (290)
T ss_pred HHhhCCeEEEEecccccCCCC---------C---cchhHHHHHHHHHHHHHH
Confidence 3 1135899999976553211 0 123666777666665543
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00063 Score=64.31 Aligned_cols=103 Identities=8% Similarity=0.045 Sum_probs=65.3
Q ss_pred CcEEEEeCcCCCCCCCCCH-HHHHHHhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cCC
Q psy16526 305 AKIKPILGDITEPELGISQ-NDQKILKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MTH 372 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~-~~~~~~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~ 372 (422)
.++.++.+|+++++-.... +.......++|+|||+||.... .+.++..+++|+.|+.++++++.. .+
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 138 (257)
T PRK09242 60 REVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA- 138 (257)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-
Confidence 4678899999987411000 0111122468999999986321 134556789999999999998753 33
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||.++.... .+...|+.+|...+.+++.+
T Consensus 139 ~~~ii~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 174 (257)
T PRK09242 139 SSAIVNIGSVSGLTHV------------RSGAPYGMTKAALLQMTRNL 174 (257)
T ss_pred CceEEEECccccCCCC------------CCCcchHHHHHHHHHHHHHH
Confidence 4789999997654321 11234666777766666544
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00079 Score=64.54 Aligned_cols=100 Identities=13% Similarity=0.250 Sum_probs=66.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+. .++|+|||+||..... +..+..+++|+.|+.++++++...
T Consensus 62 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 62 GQALPLVGDVRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 46788999999974 222222 3689999999975321 234556889999999999999742
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.+++++||.... . +....++..|+.+|.+.|.+++.+
T Consensus 136 ~~~~~~g~iv~iss~~~~-------~---~~~~~~~~~Y~~sK~a~~~~~~~l 178 (273)
T PRK08278 136 LKKSENPHILTLSPPLNL-------D---PKWFAPHTAYTMAKYGMSLCTLGL 178 (273)
T ss_pred HHhcCCCEEEEECCchhc-------c---ccccCCcchhHHHHHHHHHHHHHH
Confidence 112478888875321 0 111134557888899888887765
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00079 Score=63.17 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=61.7
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHH----HHHHHHHHHH
Q psy16526 307 IKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINML----GTKRLVELCH 368 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~----gt~~ll~~a~ 368 (422)
+..+.+|+++++ +++.+ ..++|+|||+||..... +..+..+++|+. ++++++++++
T Consensus 53 ~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (251)
T PRK07069 53 AFAAVQDVTDEA------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLR 126 (251)
T ss_pred EEEEEeecCCHH------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 456789999874 22222 23689999999976422 233455788888 7888888888
Q ss_pred hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 ~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.+ .+++|++||..++.... ....|+.+|...+.+.+.
T Consensus 127 ~~~-~~~ii~~ss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~ 164 (251)
T PRK07069 127 ASQ-PASIVNISSVAAFKAEP------------DYTAYNASKAAVASLTKS 164 (251)
T ss_pred hcC-CcEEEEecChhhccCCC------------CCchhHHHHHHHHHHHHH
Confidence 765 67999999986543211 122466677666665554
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00094 Score=63.32 Aligned_cols=99 Identities=10% Similarity=0.158 Sum_probs=64.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++.++ .++|+|||+||..... +..++.+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (263)
T PRK08226 54 HRCTAVVADVRDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE 127 (263)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 45788999999874 223332 3679999999974321 234456889999999999987641
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... +......|+.+|...|.+.+.+
T Consensus 128 ~~~~~~~~iv~isS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~l 169 (263)
T PRK08226 128 MIARKDGRIVMMSSVTGDMV-----------ADPGETAYALTKAAIVGLTKSL 169 (263)
T ss_pred HHhcCCcEEEEECcHHhccc-----------CCCCcchHHHHHHHHHHHHHHH
Confidence 12468999998644211 1112345777777766666544
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00082 Score=63.60 Aligned_cols=98 Identities=8% Similarity=0.091 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +.+.++ ..+|+|||+||.... .+.+++.+++|+.|+.++++++...
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (256)
T PRK12743 52 VRAEIRQLDLSDLP------EGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH 125 (256)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999974 222222 358999999987542 1344566899999999999988653
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++-.++|++||.... .|..+...|+.+|..-+.+++.+
T Consensus 126 l~~~~~~g~ii~isS~~~~------------~~~~~~~~Y~~sK~a~~~l~~~l 167 (256)
T PRK12743 126 MVKQGQGGRIINITSVHEH------------TPLPGASAYTAAKHALGGLTKAM 167 (256)
T ss_pred HHhcCCCeEEEEEeecccc------------CCCCCcchhHHHHHHHHHHHHHH
Confidence 112589999986421 12223446777777766665543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0011 Score=63.29 Aligned_cols=74 Identities=11% Similarity=0.123 Sum_probs=51.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|+++++ ++..+. .++|+|||+||..... +..++.+++|+.|+.++.+.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (270)
T PRK05650 49 GDGFYQRCDVRDYS------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL 122 (270)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 46788999999863 223322 3689999999975421 234456889998888866664
Q ss_pred -HhcCCCceEEEEeCCccc
Q psy16526 368 -HEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~ 385 (422)
++.+ ..++|++||..+.
T Consensus 123 ~~~~~-~~~iv~vsS~~~~ 140 (270)
T PRK05650 123 FKRQK-SGRIVNIASMAGL 140 (270)
T ss_pred HHhCC-CCEEEEECChhhc
Confidence 4444 6799999997554
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0011 Score=62.20 Aligned_cols=102 Identities=8% Similarity=0.052 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM---- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 370 (422)
.++.++.+|+++++-. ..-++.. ..++|+|||+||.... .+.+++.+++|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (248)
T TIGR01832 52 RRFLSLTADLSDIEAI--KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ 129 (248)
T ss_pred CceEEEECCCCCHHHH--HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 4688999999997411 0001111 2468999999987532 1344566899999999999988642
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..++.... ....|..+|...+.+++.+
T Consensus 130 ~~~g~iv~~sS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l 167 (248)
T TIGR01832 130 GRGGKIINIASMLSFQGGI------------RVPSYTASKHGVAGLTKLL 167 (248)
T ss_pred CCCeEEEEEecHHhccCCC------------CCchhHHHHHHHHHHHHHH
Confidence 1135899999976543211 1124677777777666554
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00076 Score=71.36 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=65.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +.+++. ..+|++||+||.... .+..+..+++|+.|+.++++++..
T Consensus 364 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 437 (582)
T PRK05855 364 AVAHAYRVDVSDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQ 437 (582)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36788999999974 222322 358999999998542 134456688999999999887643
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.-.++|++||..++... .....|+.+|...|.+.+.+
T Consensus 438 ~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~l 479 (582)
T PRK05855 438 MVERGTGGHIVNVASAAAYAPS------------RSLPAYATSKAAVLMLSECL 479 (582)
T ss_pred HHhcCCCcEEEEECChhhccCC------------CCCcHHHHHHHHHHHHHHHH
Confidence 2212589999998765321 12346777777766665543
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00022 Score=65.90 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=69.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhhhH---HHHHHhhHHHHHHHHHHHHhcCC--CceE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDEAL---KLSVTINMLGTKRLVELCHEMTH--LEAL 376 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~~~---~~~~~~Nv~gt~~ll~~a~~~~~--~~r~ 376 (422)
........||++|.. .+..++. .++-|+|+||..++.-+. +-..++...||.+||++.+.++- --||
T Consensus 82 ~~~mkLHYgDmTDss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~Vrf 155 (376)
T KOG1372|consen 82 GASMKLHYGDMTDSS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRF 155 (376)
T ss_pred cceeEEeeccccchH------HHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeE
Confidence 356788999999974 2344443 568999999987643222 22357888899999999998861 1368
Q ss_pred EEEeCCccccC--CCcccccccCCCCCHHHHHHHHhhCC
Q psy16526 377 IHVSTAYCNCD--REEVREIIYSPPYDPQKIIETMEWMD 413 (422)
Q Consensus 377 v~~SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~ 413 (422)
-.+||+--||. ..|-.| ..|.-|++.|+.+|.-+
T Consensus 156 YQAstSElyGkv~e~PQsE---~TPFyPRSPYa~aKmy~ 191 (376)
T KOG1372|consen 156 YQASTSELYGKVQEIPQSE---TTPFYPRSPYAAAKMYG 191 (376)
T ss_pred EecccHhhcccccCCCccc---CCCCCCCChhHHhhhhh
Confidence 88999866664 446667 44555666666666544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=62.53 Aligned_cols=98 Identities=8% Similarity=0.055 Sum_probs=64.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ ++.++. .++|+|||+||.... .+..++.+++|+.|+.++++++...
T Consensus 59 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (258)
T PRK09134 59 RRAVALQADLADEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA 132 (258)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999999874 222222 357999999986432 1345567899999999999988753
Q ss_pred C---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .-.++|++||..+.. +.|. ...|+.+|...|.+.+.+
T Consensus 133 ~~~~~~~~iv~~~s~~~~~----------~~p~--~~~Y~~sK~a~~~~~~~l 173 (258)
T PRK09134 133 LPADARGLVVNMIDQRVWN----------LNPD--FLSYTLSKAALWTATRTL 173 (258)
T ss_pred HHhcCCceEEEECchhhcC----------CCCC--chHHHHHHHHHHHHHHHH
Confidence 2 124778777653321 1121 235788887777666554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00093 Score=63.20 Aligned_cols=104 Identities=14% Similarity=0.118 Sum_probs=63.7
Q ss_pred CcEEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHHH----hc
Q psy16526 305 AKIKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELCH----EM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 370 (422)
.++.++.+|++|++-.-. .+...+...++|+|||+||.... .+.++..+++|+.|+.++.+++. +.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (260)
T PRK06523 49 EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR 128 (260)
T ss_pred CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 467889999998741100 00111122468999999985321 13455668999999988876654 33
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||..+.... + .+...|+.+|...|.+++.+
T Consensus 129 ~-~g~ii~isS~~~~~~~--------~---~~~~~Y~~sK~a~~~l~~~~ 166 (260)
T PRK06523 129 G-SGVIIHVTSIQRRLPL--------P---ESTTAYAAAKAALSTYSKSL 166 (260)
T ss_pred C-CcEEEEEecccccCCC--------C---CCcchhHHHHHHHHHHHHHH
Confidence 3 4689999997543210 1 12345777777777666544
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0013 Score=57.52 Aligned_cols=97 Identities=18% Similarity=0.172 Sum_probs=71.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++++|+++++ +.+.+ ....|++||+||.... .+..++.+++|+.+...+.+++...
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 125 (167)
T PF00106_consen 52 AKITFIECDLSDPE------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ 125 (167)
T ss_dssp SEEEEEESETTSHH------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cccccccccccccc------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec
Confidence 78999999999873 22332 2368999999998651 1344567999999999999999884
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ -.++|++||..+. .|...+..|..+|...+.+.+.+
T Consensus 126 ~-~g~iv~~sS~~~~------------~~~~~~~~Y~askaal~~~~~~l 162 (167)
T PF00106_consen 126 G-GGKIVNISSIAGV------------RGSPGMSAYSASKAALRGLTQSL 162 (167)
T ss_dssp T-TEEEEEEEEGGGT------------SSSTTBHHHHHHHHHHHHHHHHH
T ss_pred c-ccceEEecchhhc------------cCCCCChhHHHHHHHHHHHHHHH
Confidence 3 6799999997553 12234557888888877777654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00096 Score=62.50 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=63.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH----hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL----KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM--- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~----~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 370 (422)
.+++++++|+++++ +++.+ ...+|+|||+||..... +...+.+++|+.|+.++++++...
T Consensus 51 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (243)
T PRK07102 51 VAVSTHELDILDTA------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEA 124 (243)
T ss_pred CeEEEEecCCCChH------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 57899999999874 23333 33579999999864321 223356889999999999887642
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||.++.... | ....|+.+|...+.+.+.+
T Consensus 125 ~~~~~iv~~sS~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~l 162 (243)
T PRK07102 125 RGSGTIVGISSVAGDRGR----------A--SNYVYGSAKAALTAFLSGL 162 (243)
T ss_pred CCCCEEEEEecccccCCC----------C--CCcccHHHHHHHHHHHHHH
Confidence 225789999997542110 1 1124666777666655543
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0011 Score=63.36 Aligned_cols=97 Identities=10% Similarity=0.101 Sum_probs=62.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
+++++.+|+++++ +++.++ .++|+|||+||..... +..+..+++|+.|+.++++++...
T Consensus 45 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 118 (274)
T PRK05693 45 GFTAVQLDVNDGA------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLL 118 (274)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4678899999863 223222 3689999999965321 344566899999999999887531
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||.++.... | ..+.|..+|...|.+.+.+
T Consensus 119 ~~~~g~iv~isS~~~~~~~----------~--~~~~Y~~sK~al~~~~~~l 157 (274)
T PRK05693 119 RRSRGLVVNIGSVSGVLVT----------P--FAGAYCASKAAVHALSDAL 157 (274)
T ss_pred hhcCCEEEEECCccccCCC----------C--CccHHHHHHHHHHHHHHHH
Confidence 113579999987543211 1 1234667777666665543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00092 Score=64.92 Aligned_cols=102 Identities=12% Similarity=0.072 Sum_probs=65.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHH---HhcCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHhc-CC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKI---LKQNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHEM-TH 372 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~---~~~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 372 (422)
.++.++.+|+++++.. ..-++. ...++|+++|+||... + .+++++.+++|+.|+.++++++... ..
T Consensus 100 ~~~~~~~~Dl~~~~~~--~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 177 (294)
T PRK07985 100 RKAVLLPGDLSDEKFA--RSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK 177 (294)
T ss_pred CeEEEEEccCCCHHHH--HHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Confidence 4577899999987411 001111 1246899999998632 1 1345567999999999999998753 11
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
-.++|++||..++... | ....|+.+|...+.+.+.+
T Consensus 178 ~g~iv~iSS~~~~~~~----------~--~~~~Y~asKaal~~l~~~l 213 (294)
T PRK07985 178 GASIITTSSIQAYQPS----------P--HLLDYAATKAAILNYSRGL 213 (294)
T ss_pred CCEEEEECCchhccCC----------C--CcchhHHHHHHHHHHHHHH
Confidence 2589999997654321 1 1235777777666665543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0015 Score=61.25 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=63.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHH-------HhcCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKI-------LKQNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~-------~~~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|+++.+ +.++.. ...++|+|||+||.... .+.+++.+++|+.|+.++++++.
T Consensus 62 ~~~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 137 (247)
T PRK08945 62 PQPAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLP 137 (247)
T ss_pred CCceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence 45778888986432 112222 22468999999987432 13455678999999999888774
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .++||++||..+.... .....|+.+|...|.+++.+
T Consensus 138 ~l~~~~-~~~iv~~ss~~~~~~~------------~~~~~Y~~sK~a~~~~~~~~ 179 (247)
T PRK08945 138 LLLKSP-AASLVFTSSSVGRQGR------------ANWGAYAVSKFATEGMMQVL 179 (247)
T ss_pred HHHhCC-CCEEEEEccHhhcCCC------------CCCcccHHHHHHHHHHHHHH
Confidence 333 6799999997443111 11235777888877776654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=61.97 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=62.7
Q ss_pred cEEEEeCcCCCCCCCCCH--HHHHHHhcCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh----cC
Q psy16526 306 KIKPILGDITEPELGISQ--NDQKILKQNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE----MT 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~ 371 (422)
++.++.+|++|++-. .+ ++......++|+|||+||.... .+...+.+++|+.|+.++++++.+ .+
T Consensus 59 ~~~~~~~D~~~~~~~-~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 137 (264)
T PRK12829 59 KVTATVADVADPAQV-ERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG 137 (264)
T ss_pred ceEEEEccCCCHHHH-HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 578899999987411 00 0111122478999999997621 133456789999999999998743 22
Q ss_pred CC-ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HL-EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~-~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++++++||.++.... .+...|+.+|...|.+++.+
T Consensus 138 -~~~~vv~~ss~~~~~~~------------~~~~~y~~~K~a~~~~~~~l 174 (264)
T PRK12829 138 -HGGVIIALSSVAGRLGY------------PGRTPYAASKWAVVGLVKSL 174 (264)
T ss_pred -CCeEEEEecccccccCC------------CCCchhHHHHHHHHHHHHHH
Confidence 3 568887775432110 11235777777777766554
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00083 Score=63.22 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=62.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ ++.++ ...+|+|||+|+.... .+..+..+++|+.|+..+++++..
T Consensus 49 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (254)
T TIGR02415 49 GKAVAYKLDVSDKD------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ 122 (254)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46789999999874 22222 2357999999987432 134456789999999988777653
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+...++|++||..+.... | ..+.|..+|...|.+.+.
T Consensus 123 ~~~~~~~~~iv~~sS~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~ 163 (254)
T TIGR02415 123 FKKQGHGGKIINAASIAGHEGN----------P--ILSAYSSTKFAVRGLTQT 163 (254)
T ss_pred HHhCCCCeEEEEecchhhcCCC----------C--CCcchHHHHHHHHHHHHH
Confidence 2212689999986443211 1 134566777777666654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0012 Score=62.41 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=65.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC---hh---hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK---FD---EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++.+|+++++ ++..+. .++|+|||+||... .. +..+..+++|+.|+.++.+++...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (258)
T PRK08628 55 PRAEFVQVDLTDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHL 128 (258)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 46789999999874 223222 36899999999532 11 345566899999999999887642
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....+++++||..+... ..+...|+.+|...|.+++.+
T Consensus 129 ~~~~~~iv~~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 167 (258)
T PRK08628 129 KASRGAIVNISSKTALTG------------QGGTSGYAAAKGAQLALTREW 167 (258)
T ss_pred hccCcEEEEECCHHhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 11368999999754321 112346777887777776654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00083 Score=62.97 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ ++..++ .++|+|||+|+.... . +.++..+++|+.|+.++++++.+
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 52 GEALAVAADVADEA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred CcEEEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45778999999863 233332 368999999987531 1 23446689999999999988765
Q ss_pred cC------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MT------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.- .-.++|++||..+.... |. ....|+.+|...|.++..+
T Consensus 126 ~~~~~~~~~~g~iv~~sS~~~~~~~----------~~-~~~~Y~~sKaa~~~~~~~l 171 (248)
T PRK06123 126 RMSTRHGGRGGAIVNVSSMAARLGS----------PG-EYIDYAASKGAIDTMTIGL 171 (248)
T ss_pred HHHhcCCCCCeEEEEECchhhcCCC----------CC-CccchHHHHHHHHHHHHHH
Confidence 21 01369999997443111 10 0123778888777776654
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0013 Score=61.86 Aligned_cols=101 Identities=10% Similarity=0.015 Sum_probs=64.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh---------cCccEEEEcccccCh---h----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK---------QNVSVVFHSAATVKF---D----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~---------~~~d~ViH~Aa~~~~---~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
++..+..|+++.+-. . ...+.+. .++|++||+||.... . +.++..+++|+.|+..+++++..
T Consensus 55 ~~~~~~~D~~~~~~~-~-~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 132 (252)
T PRK12747 55 SAFSIGANLESLHGV-E-ALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS 132 (252)
T ss_pred ceEEEecccCCHHHH-H-HHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 466788999886411 0 1111111 168999999996431 1 22455688999999999988765
Q ss_pred c-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ....++|++||..+... ......|+.+|...+.+++.+
T Consensus 133 ~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l 172 (252)
T PRK12747 133 RLRDNSRIINISSAATRIS------------LPDFIAYSMTKGAINTMTFTL 172 (252)
T ss_pred HhhcCCeEEEECCcccccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 3 11358999999865321 112346778888877776654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0011 Score=62.44 Aligned_cols=98 Identities=8% Similarity=0.064 Sum_probs=64.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++..+.+|++|++ +++.+. .++|+|||+||.... .+.+++.+++|+.|+..+++++...
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (254)
T PRK08085 58 IKAHAAPFNVTHKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARY 131 (254)
T ss_pred CeEEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45778899999974 222222 358999999986431 1345567899999999998887642
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.. +..+...|..+|...|.+++.+
T Consensus 132 ~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 172 (254)
T PRK08085 132 MVKRQAGKIINICSMQSEL------------GRDTITPYAASKGAVKMLTRGM 172 (254)
T ss_pred HHHcCCcEEEEEccchhcc------------CCCCCcchHHHHHHHHHHHHHH
Confidence 1246899999864321 1112335677777777766654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.001 Score=61.88 Aligned_cols=97 Identities=8% Similarity=0.052 Sum_probs=63.7
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc-CCCce
Q psy16526 307 IKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM-THLEA 375 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r 375 (422)
++++.+|++|++ .+.+.. .++|++||+||..... +..+..+++|+.|+.+++..+... ....+
T Consensus 53 ~~~~~~D~~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~ 126 (237)
T PRK12742 53 ATAVQTDSADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGR 126 (237)
T ss_pred CeEEecCCCCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCe
Confidence 467789998863 222222 3589999999875321 234567999999999997666542 22368
Q ss_pred EEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|++||..+.. .|..+...|+.+|...|.+++.+
T Consensus 127 iv~isS~~~~~-----------~~~~~~~~Y~~sKaa~~~~~~~l 160 (237)
T PRK12742 127 IIIIGSVNGDR-----------MPVAGMAAYAASKSALQGMARGL 160 (237)
T ss_pred EEEEecccccc-----------CCCCCCcchHHhHHHHHHHHHHH
Confidence 99999975411 12223446778888888777654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0011 Score=62.90 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=64.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----------------hhhHHHHHHhhHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----------------DEALKLSVTINMLGTK 361 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----------------~~~~~~~~~~Nv~gt~ 361 (422)
.++.++.+|+++++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (266)
T PRK06171 49 ENYQFVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF 122 (266)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH
Confidence 46788999999874 223322 368999999996421 1234556899999999
Q ss_pred HHHHHHHhc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 362 RLVELCHEM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 362 ~ll~~a~~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++++... .+-.++|++||..+.... .....|+.+|...+.+++.+
T Consensus 123 ~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~l~~~l 172 (266)
T PRK06171 123 LMSQAVARQMVKQHDGVIVNMSSEAGLEGS------------EGQSCYAATKAALNSFTRSW 172 (266)
T ss_pred HHHHHHHHHHHhcCCcEEEEEccccccCCC------------CCCchhHHHHHHHHHHHHHH
Confidence 999988752 113579999997553211 11235677777776666554
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0012 Score=62.54 Aligned_cols=98 Identities=12% Similarity=0.079 Sum_probs=62.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+ ..++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 53 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (259)
T PRK12384 53 GMAYGFGADATSEQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRL 126 (259)
T ss_pred ceeEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 35889999999864 22222 2468999999986542 1344566899999999888877542
Q ss_pred ---CC-CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---TH-LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~-~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+... .+ ....|+.+|...+.+++.+
T Consensus 127 l~~~~~~~~iv~~ss~~~~~~----------~~--~~~~Y~~sKaa~~~l~~~l 168 (259)
T PRK12384 127 MIRDGIQGRIIQINSKSGKVG----------SK--HNSGYSAAKFGGVGLTQSL 168 (259)
T ss_pred HHhCCCCcEEEEecCcccccC----------CC--CCchhHHHHHHHHHHHHHH
Confidence 11 258999988643111 01 1235677777766665544
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0014 Score=61.99 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=65.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +.+.+. .++|++||+||.... .+.++..+++|+.|+..+.+++...
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 128 (251)
T PRK12481 55 RKFHFITADLIQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQ 128 (251)
T ss_pred CeEEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHH
Confidence 46788999999974 223332 368999999997532 1345567899999999998877542
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.++|++||..+..... ....|+.+|...+.+.+.+
T Consensus 129 ~~~~~~~g~ii~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~l 170 (251)
T PRK12481 129 FVKQGNGGKIINIASMLSFQGGI------------RVPSYTASKSAVMGLTRAL 170 (251)
T ss_pred HHHcCCCCEEEEeCChhhcCCCC------------CCcchHHHHHHHHHHHHHH
Confidence 2125899999976543211 0124677777776666543
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.002 Score=60.87 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=64.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++.+++ .++|+|||+||.... .+.++..+++|+.|+.++++++.+.
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (260)
T PRK06198 56 AKAVFVQADLSDVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKL 129 (260)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999874 222222 368999999987531 1233456899999999999888542
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+.+... ..+.|+.+|...|.+.+.+
T Consensus 130 ~~~~~~~g~iv~~ss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~ 171 (260)
T PRK06198 130 MRRRKAEGTIVNIGSMSAHGGQP------------FLAAYCASKGALATLTRNA 171 (260)
T ss_pred HHhcCCCCEEEEECCcccccCCC------------CcchhHHHHHHHHHHHHHH
Confidence 1125799999976543211 1235777777776665543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0013 Score=62.05 Aligned_cols=99 Identities=12% Similarity=0.047 Sum_probs=63.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++++ ..++|+|||+||.... .+.+++.+++|+.|+..+++++..
T Consensus 58 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (254)
T PRK06114 58 RRAIQIAADVTSKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARA 131 (254)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 46778999999874 22222 2357999999997542 134456789999999888777643
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+..... ..+...|..+|...+.+.+.+
T Consensus 132 ~~~~~-~~~iv~isS~~~~~~~~----------~~~~~~Y~~sKaa~~~l~~~l 174 (254)
T PRK06114 132 MLENG-GGSIVNIASMSGIIVNR----------GLLQAHYNASKAGVIHLSKSL 174 (254)
T ss_pred HHhcC-CcEEEEECchhhcCCCC----------CCCcchHHHHHHHHHHHHHHH
Confidence 22 46899999975432211 001235677777666665543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0015 Score=61.57 Aligned_cols=98 Identities=6% Similarity=0.010 Sum_probs=64.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ ++..+. .++|+|||+|+.... .+.++..+++|+.|+.++++++...
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (258)
T PRK06949 58 GAAHVVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKR 131 (258)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 46789999999863 233332 368999999996432 1334556899999999999887531
Q ss_pred ----C-------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----T-------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~-------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ...++|++||..+... ..+...|+.+|...|.+++.+
T Consensus 132 ~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 180 (258)
T PRK06949 132 MIARAKGAGNTKPGGRIINIASVAGLRV------------LPQIGLYCMSKAAVVHMTRAM 180 (258)
T ss_pred HHhcCCcCCCCCCCeEEEEECcccccCC------------CCCccHHHHHHHHHHHHHHHH
Confidence 1 0258999998755321 112345667777777666544
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0012 Score=62.28 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=64.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|+++++ ++..+. .++|+|||+||... + .+.+++.+++|+.++..+++++.
T Consensus 56 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (253)
T PRK06172 56 GEALFVACDVTRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIP 129 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999874 223322 35799999998642 1 13445668899999987776543
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.... .....|+.+|...|.+.+.+
T Consensus 130 ~~~~~~-~~~ii~~sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~l 171 (253)
T PRK06172 130 LMLAQG-GGAIVNTASVAGLGAA------------PKMSIYAASKHAVIGLTKSA 171 (253)
T ss_pred HHHhcC-CcEEEEECchhhccCC------------CCCchhHHHHHHHHHHHHHH
Confidence 333 4689999997554321 12346777887777766554
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0013 Score=61.91 Aligned_cols=98 Identities=16% Similarity=0.117 Sum_probs=63.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC---------c--cEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN---------V--SVVFHSAATVKF--------DEALKLSVTINMLGTKRLVE 365 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~---------~--d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~ 365 (422)
.+++++.+|+++++ +++.+.++ . .+++|+||.... .+...+.+++|+.|+..+++
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 121 (251)
T PRK06924 48 SNLTFHSLDLQDVH------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS 121 (251)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHH
Confidence 46889999999874 22332221 1 278999987532 12344568889999766665
Q ss_pred HHHh----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 366 LCHE----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 366 ~a~~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.. .+..+++|++||..+. .|..+...|+.+|...|.+++.+
T Consensus 122 ~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~Y~~sKaa~~~~~~~l 168 (251)
T PRK06924 122 TFMKHTKDWKVDKRVINISSGAAK------------NPYFGWSAYCSSKAGLDMFTQTV 168 (251)
T ss_pred HHHHHHhccCCCceEEEecchhhc------------CCCCCcHHHhHHHHHHHHHHHHH
Confidence 5543 2224689999996542 23345668888888888877654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0016 Score=62.07 Aligned_cols=98 Identities=18% Similarity=0.150 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++.++ .++|+|||+||.... .+..++.+++|+.|+.++++++...
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 131 (264)
T PRK07576 58 PEGLGVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPL 131 (264)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35678899999863 233332 357999999975321 1334556889999999999988642
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.++|++||..+.. |......|..+|...|.+++.+
T Consensus 132 l~~~~g~iv~iss~~~~~------------~~~~~~~Y~asK~a~~~l~~~l 171 (264)
T PRK07576 132 LRRPGASIIQISAPQAFV------------PMPMQAHVCAAKAGVDMLTRTL 171 (264)
T ss_pred HHhCCCEEEEECChhhcc------------CCCCccHHHHHHHHHHHHHHHH
Confidence 1125899999975431 1122345677777777666654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0021 Score=63.72 Aligned_cols=96 Identities=14% Similarity=0.166 Sum_probs=60.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +++.+ ..++|++||+|+...+. +..+..+++|+.|+.++.+.+
T Consensus 57 ~~~~~v~~Dv~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~ 130 (334)
T PRK07109 57 GEALAVVADVADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRH 130 (334)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46788999999974 22332 23689999999864321 234456788887777655554
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++.+ ..++|++||..++... | ..+.|..+|...+.+.+.
T Consensus 131 ~~~~~-~g~iV~isS~~~~~~~----------~--~~~~Y~asK~a~~~~~~~ 170 (334)
T PRK07109 131 MRPRD-RGAIIQVGSALAYRSI----------P--LQSAYCAAKHAIRGFTDS 170 (334)
T ss_pred HHhcC-CcEEEEeCChhhccCC----------C--cchHHHHHHHHHHHHHHH
Confidence 4433 4689999998665321 1 234567777765555443
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0014 Score=61.68 Aligned_cols=100 Identities=13% Similarity=0.163 Sum_probs=63.2
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh----cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHH----HHHHHhc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK----QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRL----VELCHEM 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~----~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~l----l~~a~~~ 370 (422)
+++.+.+|++|++.. . ...+... .++|.|+|+||.... .+..++.+++|+.|+.++ ++.+++.
T Consensus 46 ~~~~~~~D~~~~~~~-~-~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 123 (256)
T PRK08017 46 GFTGILLDLDDPESV-E-RAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH 123 (256)
T ss_pred CCeEEEeecCCHHHH-H-HHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 467888999886411 0 0112221 357999999986431 123446689999998886 5666665
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ .+++|++||.++... ...+..|+.+|...|.+.+.+
T Consensus 124 ~-~~~iv~~ss~~~~~~------------~~~~~~Y~~sK~~~~~~~~~l 160 (256)
T PRK08017 124 G-EGRIVMTSSVMGLIS------------TPGRGAYAASKYALEAWSDAL 160 (256)
T ss_pred C-CCEEEEEcCcccccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 5 678999999754321 112345778888887766543
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0017 Score=61.22 Aligned_cols=96 Identities=14% Similarity=0.107 Sum_probs=62.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.+++++.+|++|++ ++..++ .++|+|||+||..... +......++|+.|+.++++++..
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (257)
T PRK07074 49 ARFVPVACDLTDAA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEG 122 (257)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999999974 222222 2589999999875321 22234477999999999988843
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.... .. ..|+.+|...|.+++.+
T Consensus 123 ~~~~~-~~~iv~~sS~~~~~~~--------~~-----~~y~~sK~a~~~~~~~~ 162 (257)
T PRK07074 123 MLKRS-RGAVVNIGSVNGMAAL--------GH-----PAYSAAKAGLIHYTKLL 162 (257)
T ss_pred HHHcC-CeEEEEEcchhhcCCC--------CC-----cccHHHHHHHHHHHHHH
Confidence 33 5689999996543211 01 14667777776666554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0015 Score=63.79 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=64.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++.+|++|++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 62 ~~~~~~~~Dv~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~ 135 (306)
T PRK07792 62 AKAVAVAGDISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW 135 (306)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46788999999874 22222 2468999999997642 1345567899999999999987531
Q ss_pred -------C--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -------T--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -------~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ .-.++|++||..+.... | ....|+.+|...+.+.+.+
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~~~~Y~asKaal~~l~~~l 182 (306)
T PRK07792 136 RAKAKAAGGPVYGRIVNTSSEAGLVGP----------V--GQANYGAAKAGITALTLSA 182 (306)
T ss_pred HHhhcccCCCCCcEEEEECCcccccCC----------C--CCchHHHHHHHHHHHHHHH
Confidence 0 01479999987543211 1 1225777777777666543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0011 Score=62.27 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=61.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHH-hcC-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCH-EMT- 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~-~~~- 371 (422)
.++.++.+|+++++-. .+.++.+ ..++|+|||+||.... . ++.+..+++|+.|+.++++++. ...
T Consensus 52 ~~~~~~~~Dl~~~~~~--~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (248)
T PRK06947 52 GRACVVAGDVANEADV--IAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLST 129 (248)
T ss_pred CcEEEEEeccCCHHHH--HHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 4688999999987411 0011122 2368999999986431 1 2334568899999999975543 321
Q ss_pred ----CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 ----HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ----~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+-.++|++||..+..... . .+..|..+|...+.+.+.+
T Consensus 130 ~~~~~~~~ii~~sS~~~~~~~~--------~---~~~~Y~~sK~~~~~~~~~l 171 (248)
T PRK06947 130 DRGGRGGAIVNVSSIASRLGSP--------N---EYVDYAGSKGAVDTLTLGL 171 (248)
T ss_pred cCCCCCcEEEEECchhhcCCCC--------C---CCcccHhhHHHHHHHHHHH
Confidence 013599999875431110 0 1124777777766665543
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0021 Score=61.17 Aligned_cols=97 Identities=8% Similarity=0.119 Sum_probs=63.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|+++++ +.+.+. ..+|+|||+||.... .+.....+++|+.|+..+++++..
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (265)
T PRK07097 59 IEAHGYVCDVTDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPS 132 (265)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 36888999999874 222222 358999999997542 133455688999999988887653
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 133 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sKaal~~l~~~l 173 (265)
T PRK07097 133 MIKKG-HGKIINICSMMSELG------------RETVSAYAAAKGGLKMLTKNI 173 (265)
T ss_pred HHhcC-CcEEEEEcCccccCC------------CCCCccHHHHHHHHHHHHHHH
Confidence 23 578999998643211 112345666776666665544
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.001 Score=63.18 Aligned_cols=102 Identities=14% Similarity=0.070 Sum_probs=64.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-----h---h----hHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-----D---E----ALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-----~---~----~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|+++++-. +..++.+ ..++|++||+||.... . + .++..+++|+.|+..+++++..
T Consensus 52 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 52 DHVLVVEGDVTSYADN--QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred CcceEEEccCCCHHHH--HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 4578899999987411 0111121 2368999999996431 1 1 1345578999999999988864
Q ss_pred c--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ..-.++|++||..++... .....|+.+|...+.+.+.+
T Consensus 130 ~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 170 (263)
T PRK06200 130 ALKASGGSMIFTLSNSSFYPG------------GGGPLYTASKHAVVGLVRQL 170 (263)
T ss_pred HHHhcCCEEEEECChhhcCCC------------CCCchhHHHHHHHHHHHHHH
Confidence 2 112479999987553211 12235788888877777654
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0012 Score=62.64 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=64.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------h-----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------D-----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~-----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++..+.+|+++++-. ++.++++ ..++|++||+||.... . +.+++.+++|+.|+.++++++..
T Consensus 51 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 51 DAVVGVEGDVRSLDDH--KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred CceEEEEeccCCHHHH--HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 4578899999986311 0111121 2468999999986321 1 13456789999999999999875
Q ss_pred cC--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MT--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.- .-.++|++||..+... ......|+.+|...+.+.+.+
T Consensus 129 ~~~~~~g~iv~~sS~~~~~~------------~~~~~~Y~~sKaa~~~l~~~l 169 (262)
T TIGR03325 129 ALVASRGSVIFTISNAGFYP------------NGGGPLYTAAKHAVVGLVKEL 169 (262)
T ss_pred HHhhcCCCEEEEeccceecC------------CCCCchhHHHHHHHHHHHHHH
Confidence 31 1247888888654311 111235778888887777654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0024 Score=60.28 Aligned_cols=96 Identities=10% Similarity=0.141 Sum_probs=62.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|+++++ ++..++ .++|+|||+|+.... .+.+++.+++|+.|+.++.+.+.+
T Consensus 60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 133 (256)
T PRK06124 60 GAAEALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQR 133 (256)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45789999999874 222222 357999999996532 123455689999999999977754
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+ ..++|++||..+.... | ....|..+|...+.+.+.
T Consensus 134 ~~~~~-~~~iv~~ss~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~ 173 (256)
T PRK06124 134 MKRQG-YGRIIAITSIAGQVAR----------A--GDAVYPAAKQGLTGLMRA 173 (256)
T ss_pred HHhcC-CcEEEEEeechhccCC----------C--CccHhHHHHHHHHHHHHH
Confidence 33 5789999997543211 1 123566666666555544
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0026 Score=59.59 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=65.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc----CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-CC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ----NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM-TH 372 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~----~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 372 (422)
.++.++.+|+++++ +++.+++ +.|.++|+||.... .+..++.+++|+.|+.++++++... .+
T Consensus 46 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 119 (240)
T PRK06101 46 ANIFTLAFDVTDHP------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC 119 (240)
T ss_pred CCCeEEEeeCCCHH------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 45788999999874 3344443 46899999985431 1234567899999999999998863 11
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||..+... .| ....|+.+|...|.+.+.+
T Consensus 120 ~~~iv~isS~~~~~~----------~~--~~~~Y~asK~a~~~~~~~l 155 (240)
T PRK06101 120 GHRVVIVGSIASELA----------LP--RAEAYGASKAAVAYFARTL 155 (240)
T ss_pred CCeEEEEechhhccC----------CC--CCchhhHHHHHHHHHHHHH
Confidence 357999988643211 11 2336778888777776543
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0022 Score=59.83 Aligned_cols=73 Identities=12% Similarity=0.155 Sum_probs=51.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|+++++ +.+.+ ....|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 48 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (239)
T TIGR01831 48 GNARLLQFDVADRV------ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121 (239)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999974 22222 2357999999986431 23455678999999999988763
Q ss_pred ---hcCCCceEEEEeCCcc
Q psy16526 369 ---EMTHLEALIHVSTAYC 384 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~ 384 (422)
+.+ ..++|++||..+
T Consensus 122 ~~~~~~-~~~iv~vsS~~~ 139 (239)
T TIGR01831 122 MIRARQ-GGRIITLASVSG 139 (239)
T ss_pred HHhhcC-CeEEEEEcchhh
Confidence 222 468999999643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.002 Score=61.51 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=51.7
Q ss_pred cEEEEeCcCCCCCCCCCH--HHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh----cCC
Q psy16526 306 KIKPILGDITEPELGISQ--NDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE----MTH 372 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~----~~~ 372 (422)
+++++.+|++|++-. .. +.......++|++||+||..... +..+..+++|+.|+.++.+++.. .+
T Consensus 51 ~~~~~~~D~~~~~~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~- 128 (273)
T PRK07825 51 LVVGGPLDVTDPASF-AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG- 128 (273)
T ss_pred cceEEEccCCCHHHH-HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 578899999987411 00 01111224689999999975321 23455689999999998877643 33
Q ss_pred CceEEEEeCCccc
Q psy16526 373 LEALIHVSTAYCN 385 (422)
Q Consensus 373 ~~r~v~~SS~~~~ 385 (422)
..++|++||..+.
T Consensus 129 ~g~iv~isS~~~~ 141 (273)
T PRK07825 129 RGHVVNVASLAGK 141 (273)
T ss_pred CCEEEEEcCcccc
Confidence 5689999997553
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0025 Score=60.52 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=63.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++.+|+++++ ++..+. ..+|++||+||.... .+.+++.+++|+.|+.++++++...
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 125 (261)
T PRK08265 52 ERARFIATDITDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHL 125 (261)
T ss_pred CeeEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 46889999999874 223322 367999999986421 2345566899999999999887641
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+.... | ....|..+|...+.+.+.+
T Consensus 126 ~~~~g~ii~isS~~~~~~~----------~--~~~~Y~asKaa~~~~~~~l 164 (261)
T PRK08265 126 ARGGGAIVNFTSISAKFAQ----------T--GRWLYPASKAAIRQLTRSM 164 (261)
T ss_pred hcCCcEEEEECchhhccCC----------C--CCchhHHHHHHHHHHHHHH
Confidence 113589999987543111 1 1235666777666655543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.003 Score=59.82 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=48.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHH----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVEL---- 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~---- 366 (422)
.++.++.+|++|++ ++.+++ .++|++||+||..... +.++..+++|+.|+..+++.
T Consensus 57 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 130 (261)
T PRK08936 57 GEAIAVKGDVTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKY 130 (261)
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45778999999874 222222 3589999999974321 23445688999888765554
Q ss_pred HHhcCCCceEEEEeCCc
Q psy16526 367 CHEMTHLEALIHVSTAY 383 (422)
Q Consensus 367 a~~~~~~~r~v~~SS~~ 383 (422)
+++.+.-.++|++||..
T Consensus 131 ~~~~~~~g~iv~~sS~~ 147 (261)
T PRK08936 131 FVEHDIKGNIINMSSVH 147 (261)
T ss_pred HHhcCCCcEEEEEcccc
Confidence 34433135899999864
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0023 Score=59.09 Aligned_cols=99 Identities=12% Similarity=0.082 Sum_probs=64.2
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH---h--cCccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL---K--QNVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~---~--~~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
+++++.+|+++++ +++.+ + .++|+|||+|+.... .++++..+++|+.|+.++++++...
T Consensus 45 ~~~~~~~D~~~~~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 118 (222)
T PRK06953 45 GAEALALDVADPA------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLV 118 (222)
T ss_pred cceEEEecCCCHH------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhh
Confidence 3568899999974 22332 2 248999999987521 1345567999999999999998752
Q ss_pred -CCCceEEEEeCCcc-ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYC-NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~-~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-.+++++||..+ .+.. +..+...|..+|...|.+++.+
T Consensus 119 ~~~~g~iv~isS~~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~~ 160 (222)
T PRK06953 119 EAAGGVLAVLSSRMGSIGDA----------TGTTGWLYRASKAALNDALRAA 160 (222)
T ss_pred hccCCeEEEEcCcccccccc----------cCCCccccHHhHHHHHHHHHHH
Confidence 11246899988643 2221 1111125777787777776654
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0019 Score=60.82 Aligned_cols=75 Identities=15% Similarity=0.179 Sum_probs=52.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+++ ..++|+|||+||.... .+.++..+++|+.|+.++++++.+.
T Consensus 50 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 123 (252)
T PRK07677 50 GQVLTVQMDVRNPE------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKY 123 (252)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence 46889999999874 22222 2368999999985321 1234567999999999999998531
Q ss_pred ----CCCceEEEEeCCccc
Q psy16526 371 ----THLEALIHVSTAYCN 385 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~ 385 (422)
+.-.++|++||.++.
T Consensus 124 ~~~~~~~g~ii~isS~~~~ 142 (252)
T PRK07677 124 WIEKGIKGNIINMVATYAW 142 (252)
T ss_pred HHhcCCCEEEEEEcChhhc
Confidence 213589999988653
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0014 Score=61.19 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=62.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh--------hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD--------EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.++ .++|+|||+|+..... +..+..+++|+.|+.++++++..
T Consensus 51 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (247)
T PRK09730 51 GKAFVLQADISDEN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124 (247)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35788999999974 223332 3578999999864211 23446689999999888877654
Q ss_pred c------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++..+||++||..+.... | ..+..|+.+|...|.+++.+
T Consensus 125 ~~~~~~~~~~g~~v~~sS~~~~~~~----------~-~~~~~Y~~sK~~~~~~~~~l 170 (247)
T PRK09730 125 RMALKHGGSGGAIVNVSSAASRLGA----------P-GEYVDYAASKGAIDTLTTGL 170 (247)
T ss_pred HHHhcCCCCCcEEEEECchhhccCC----------C-CcccchHhHHHHHHHHHHHH
Confidence 2 112469999997543211 1 01123777777777666543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0032 Score=57.15 Aligned_cols=94 Identities=20% Similarity=0.269 Sum_probs=60.4
Q ss_pred EEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-CCCceEE
Q psy16526 309 PILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM-THLEALI 377 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v 377 (422)
.+.+|+++++ +++.+. .++|+|||+||.... .+..++.+++|+.|+.++++++... ....+++
T Consensus 35 ~~~~D~~~~~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 108 (199)
T PRK07578 35 DVQVDITDPA------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFT 108 (199)
T ss_pred ceEecCCChH------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 4678998874 233333 378999999986432 1234556889999999999988652 1135799
Q ss_pred EEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 378 HVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 378 ~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++||.++.. |......|..+|..-+.+.+.+
T Consensus 109 ~iss~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 139 (199)
T PRK07578 109 LTSGILSDE------------PIPGGASAATVNGALEGFVKAA 139 (199)
T ss_pred EEcccccCC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 998865421 1112345666776666665543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0031 Score=59.45 Aligned_cols=100 Identities=10% Similarity=0.115 Sum_probs=64.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++..+.+|+++++ +.+++ ..++|++||+||..... +..++.+++|+.|+..+++++...
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (253)
T PRK05867 58 GKVVPVCCDVSQHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA 131 (253)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 46788999999874 22222 24789999999975421 234556889999999999987532
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.++|++||.++.... .| .....|+.+|...+.+.+.+
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~~---------~~-~~~~~Y~asKaal~~~~~~l 175 (253)
T PRK05867 132 MVKQGQGGVIINTASMSGHIIN---------VP-QQVSHYCASKAAVIHLTKAM 175 (253)
T ss_pred HHhcCCCcEEEEECcHHhcCCC---------CC-CCccchHHHHHHHHHHHHHH
Confidence 112468999886542110 01 11235777887777776654
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.00055 Score=62.58 Aligned_cols=102 Identities=18% Similarity=0.116 Sum_probs=70.5
Q ss_pred eCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 311 LGDITEPELGISQNDQKILK--QNVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+||++. ++.+.+. .++.+|||+||.++- ....-++++.|+.-.-|+|..|-+.| ++++|+.-|...
T Consensus 38 d~DLt~~------a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCI 110 (315)
T KOG1431|consen 38 DADLTNL------ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCI 110 (315)
T ss_pred cccccch------HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceee
Confidence 4567664 3445554 367999999998861 12345689999999999999999988 999999877666
Q ss_pred ccC--CCccccccc-C-CCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCD--REEVREIIY-S-PPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~--~~~~~E~~~-~-~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+++ ..|++|... . +|-...-.|+.+|.|.+-..++
T Consensus 111 fPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~a 149 (315)
T KOG1431|consen 111 FPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQA 149 (315)
T ss_pred cCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence 665 357999764 2 2333344577788665544333
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=59.79 Aligned_cols=74 Identities=14% Similarity=0.299 Sum_probs=52.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++.+|++|++ +.+.+ ..++|+|||+||..... +..++.+++|+.|+.++++++...
T Consensus 53 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 126 (263)
T PRK09072 53 GRHRWVVADLTSEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLL 126 (263)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 47889999999874 22222 24689999999975421 234566889999999999988642
Q ss_pred --CCCceEEEEeCCcc
Q psy16526 371 --THLEALIHVSTAYC 384 (422)
Q Consensus 371 --~~~~r~v~~SS~~~ 384 (422)
.+..++|++||.++
T Consensus 127 ~~~~~~~iv~isS~~~ 142 (263)
T PRK09072 127 RAQPSAMVVNVGSTFG 142 (263)
T ss_pred HhcCCCEEEEecChhh
Confidence 11357899988754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0034 Score=59.44 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=64.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH----hc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH----EM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~ 370 (422)
.++.++.+|+++++-. .+-+..+ ...+|+|||.||..... +..+..+++|+.|...+...+. +.
T Consensus 68 ~~~~~~~~D~~~~~~i--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 145 (256)
T PRK12859 68 VKVSSMELDLTQNDAP--KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK 145 (256)
T ss_pred CeEEEEEcCCCCHHHH--HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 4678899999987411 0111122 23579999999875321 2344568999999988864443 22
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ -.++|++||..+. .|..+...|+.+|...+.+.+.+
T Consensus 146 ~-~g~iv~isS~~~~------------~~~~~~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK12859 146 S-GGRIINMTSGQFQ------------GPMVGELAYAATKGAIDALTSSL 182 (256)
T ss_pred C-CeEEEEEcccccC------------CCCCCchHHHHHHHHHHHHHHHH
Confidence 2 3589999997542 12234567888888777776554
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0025 Score=59.26 Aligned_cols=104 Identities=9% Similarity=0.029 Sum_probs=65.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-------------hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-------------EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-------------~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++++|+++++-. ..+.+...++|+|||+||..... +.....+.+|+.|+..+.+.+...
T Consensus 43 ~~~~~~~~Dls~~~~~---~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~ 119 (235)
T PRK09009 43 DNVQWHALDVTDEAEI---KQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKL 119 (235)
T ss_pred CceEEEEecCCCHHHH---HHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 4678899999987411 11223345789999999976311 123356889999999888887652
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..+++++||..+. ..+ .+..+...|+.+|...+.+.+.+
T Consensus 120 ~~~~~~~i~~iss~~~~-----~~~----~~~~~~~~Y~asK~a~~~~~~~l 162 (235)
T PRK09009 120 KQSESAKFAVISAKVGS-----ISD----NRLGGWYSYRASKAALNMFLKTL 162 (235)
T ss_pred cccCCceEEEEeecccc-----ccc----CCCCCcchhhhhHHHHHHHHHHH
Confidence 123578899875321 111 12223456777888777776654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0028 Score=58.94 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=53.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHhc---CCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHEM---THL 373 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 373 (422)
.++.++.+|++++ + ++..+...++|+|||+||... . .+.+++.+++|+.|+.++++++... .+.
T Consensus 45 ~~~~~~~~D~~~~-~----~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 119 (235)
T PRK06550 45 GNFHFLQLDLSDD-L----EPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS 119 (235)
T ss_pred CcEEEEECChHHH-H----HHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 4678899999886 1 222333457899999998532 1 1344567899999999999988642 123
Q ss_pred ceEEEEeCCccc
Q psy16526 374 EALIHVSTAYCN 385 (422)
Q Consensus 374 ~r~v~~SS~~~~ 385 (422)
.++|++||.++.
T Consensus 120 ~~iv~~sS~~~~ 131 (235)
T PRK06550 120 GIIINMCSIASF 131 (235)
T ss_pred cEEEEEcChhhc
Confidence 589999997653
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0018 Score=60.01 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=63.8
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-----cCccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHHHhcC
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-----QNVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELCHEMT 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-----~~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 371 (422)
++.++.+|++|++ +++.+. .++|+|||+||.... .+.....+++|+.|+.++++++...-
T Consensus 46 ~~~~~~~D~~d~~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (225)
T PRK08177 46 GVHIEKLDMNDPA------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQV 119 (225)
T ss_pred ccceEEcCCCCHH------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhh
Confidence 5678889999874 222222 258999999987532 12334567899999999999886431
Q ss_pred --CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 --HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 --~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....++++||.++.... .|..+...|+.+|...|.+.+.+
T Consensus 120 ~~~~~~iv~~ss~~g~~~~---------~~~~~~~~Y~~sK~a~~~~~~~l 161 (225)
T PRK08177 120 RPGQGVLAFMSSQLGSVEL---------PDGGEMPLYKASKAALNSMTRSF 161 (225)
T ss_pred hhcCCEEEEEccCcccccc---------CCCCCccchHHHHHHHHHHHHHH
Confidence 12578888886543211 11122335778888887777654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0024 Score=67.07 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=66.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++..+.+|++|++ +++.++ ..+|++||+||.... . +.++..+++|+.|+.++++++..
T Consensus 315 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 388 (520)
T PRK06484 315 DEHLSVQADITDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR 388 (520)
T ss_pred CceeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 35667899999974 222222 358999999997521 1 23456689999999999998875
Q ss_pred c-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+-.++|++||.++... ..+...|+.+|...+.+.+.+
T Consensus 389 ~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 428 (520)
T PRK06484 389 LMSQGGVIVNLGSIASLLA------------LPPRNAYCASKAAVTMLSRSL 428 (520)
T ss_pred HhccCCEEEEECchhhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 3 22358999999765421 112346777887777766654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0051 Score=58.27 Aligned_cols=77 Identities=13% Similarity=0.019 Sum_probs=50.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccChh----hhH---HHHHHhhHHHHHH----HHHHHHhcC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKFD----EAL---KLSVTINMLGTKR----LVELCHEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~~----~~~---~~~~~~Nv~gt~~----ll~~a~~~~ 371 (422)
.+++++.+|++|++-. .+..+.+. .++|++||+||..... .+. .+.+++|+.|+.. +++++++.+
T Consensus 60 ~~v~~~~~D~~~~~~~--~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~ 137 (253)
T PRK07904 60 SSVEVIDFDALDTDSH--PKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG 137 (253)
T ss_pred CceEEEEecCCChHHH--HHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC
Confidence 3689999999987421 01122222 3699999999875321 111 2358899998876 566666654
Q ss_pred CCceEEEEeCCcc
Q psy16526 372 HLEALIHVSTAYC 384 (422)
Q Consensus 372 ~~~r~v~~SS~~~ 384 (422)
..++|++||..+
T Consensus 138 -~~~iv~isS~~g 149 (253)
T PRK07904 138 -FGQIIAMSSVAG 149 (253)
T ss_pred -CceEEEEechhh
Confidence 579999999754
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0042 Score=60.30 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=65.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++..+.+|++|++ +.+.+ ..++|+|||+||.... .+..++.+++|+.|+.++++++...
T Consensus 57 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~ 130 (296)
T PRK05872 57 DRVLTVVADVTDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPA 130 (296)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34566779999874 22222 2468999999997532 1344567899999999999988642
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... .....|+.+|...|.+.+.+
T Consensus 131 ~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaal~~~~~~l 170 (296)
T PRK05872 131 LIERRGYVLQVSSLAAFAAA------------PGMAAYCASKAGVEAFANAL 170 (296)
T ss_pred HHHcCCEEEEEeCHhhcCCC------------CCchHHHHHHHHHHHHHHHH
Confidence 113589999997654221 12346778888777766544
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0033 Score=59.48 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=62.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh----c-------CccEEEEcccccCh----------hhhHHHHHHhhHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK----Q-------NVSVVFHSAATVKF----------DEALKLSVTINMLGTKRL 363 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~----~-------~~d~ViH~Aa~~~~----------~~~~~~~~~~Nv~gt~~l 363 (422)
.++.++.+|+++++ +.+.+. + +.|++||+||.... .+..+..+++|+.|+..+
T Consensus 55 ~~v~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~ 128 (256)
T TIGR01500 55 LRVVRVSLDLGAEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCL 128 (256)
T ss_pred ceEEEEEeccCCHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHH
Confidence 36788999999874 222222 1 12699999986321 123456789999999888
Q ss_pred HHHHHhc-----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 364 VELCHEM-----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 364 l~~a~~~-----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.+... +.-.++|++||..+.. |......|+.+|...+.+.+.+
T Consensus 129 ~~~~~~~l~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~l 178 (256)
T TIGR01500 129 TSSVLKAFKDSPGLNRTVVNISSLCAIQ------------PFKGWALYCAGKAARDMLFQVL 178 (256)
T ss_pred HHHHHHHHhhcCCCCCEEEEECCHHhCC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 7776542 1124799999975431 1122456888888777776654
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0057 Score=59.99 Aligned_cols=112 Identities=15% Similarity=0.057 Sum_probs=66.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE---- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~---- 369 (422)
.++.++.+|+++++-. ..-.+.+ ..++|++||+||.... .+..+..+++|+.|+..+.+++..
T Consensus 53 ~~~~~~~~Dl~~~~~v--~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~ 130 (314)
T TIGR01289 53 DSYTIMHLDLGSLDSV--RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKN 130 (314)
T ss_pred CeEEEEEcCCCCHHHH--HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Confidence 4678889999987411 0011111 2368999999996421 123455689999998888766543
Q ss_pred cC-CCceEEEEeCCccccCC------Ccccccc---------------cCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 370 MT-HLEALIHVSTAYCNCDR------EEVREII---------------YSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 370 ~~-~~~r~v~~SS~~~~g~~------~~~~E~~---------------~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
.+ +..++|++||..++... .+.+... ...+..+...|+.+|.+...+..
T Consensus 131 ~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~ 201 (314)
T TIGR01289 131 SPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVR 201 (314)
T ss_pred CCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHH
Confidence 21 13589999998554210 0110000 01345667789999988655443
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.003 Score=65.17 Aligned_cols=72 Identities=18% Similarity=0.236 Sum_probs=51.2
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcC--
Q psy16526 308 KPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMT-- 371 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 371 (422)
.++.+|+++++ +.+.+. .++|+|||+||.... .+.++..+++|+.|+.++.+++....
T Consensus 259 ~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 332 (450)
T PRK08261 259 TALALDITAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGAL 332 (450)
T ss_pred eEEEEeCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 57788999874 222222 258999999997642 13455668999999999999997632
Q ss_pred -CCceEEEEeCCccc
Q psy16526 372 -HLEALIHVSTAYCN 385 (422)
Q Consensus 372 -~~~r~v~~SS~~~~ 385 (422)
+-.++|++||..+.
T Consensus 333 ~~~g~iv~~SS~~~~ 347 (450)
T PRK08261 333 GDGGRIVGVSSISGI 347 (450)
T ss_pred cCCCEEEEECChhhc
Confidence 12689999997543
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0039 Score=58.91 Aligned_cols=98 Identities=9% Similarity=0.038 Sum_probs=63.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++++. .++|++||+||.... .+..++.+++|+.|+..+++++...
T Consensus 61 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 61 AKAVAFQADLTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred CcEEEEecCcCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 46788999999874 223322 368999999997421 1234566899999999999998753
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....++++++|+.+.... | ....|+.+|...|.+.+.+
T Consensus 135 ~~~~~~iv~~~ss~~~~~~----------~--~~~~Y~~sK~a~~~~~~~l 173 (257)
T PRK12744 135 LNDNGKIVTLVTSLLGAFT----------P--FYSAYAGSKAPVEHFTRAA 173 (257)
T ss_pred hccCCCEEEEecchhcccC----------C--CcccchhhHHHHHHHHHHH
Confidence 112467766443221110 1 1346788888888777665
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0043 Score=57.89 Aligned_cols=103 Identities=14% Similarity=0.022 Sum_probs=62.9
Q ss_pred cEEEEeCcCCCCCC-CCCH--HHHHHHh-cCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHHhc---
Q psy16526 306 KIKPILGDITEPEL-GISQ--NDQKILK-QNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCHEM--- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~-~l~~--~~~~~~~-~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~--- 370 (422)
.+.++.+|+++.+. .+.. +.+.... .++|+|||+||.... . +.+.+.+++|+.|+.++++++.+.
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 136 (239)
T PRK08703 57 EPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ 136 (239)
T ss_pred CcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 45678889876421 0000 0111112 467999999996421 1 234456899999999998887542
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..+++++||..+. .|......|+.+|...|.+++.+
T Consensus 137 ~~~~~iv~~ss~~~~------------~~~~~~~~Y~~sKaa~~~~~~~l 174 (239)
T PRK08703 137 SPDASVIFVGESHGE------------TPKAYWGGFGASKAALNYLCKVA 174 (239)
T ss_pred CCCCEEEEEeccccc------------cCCCCccchHHhHHHHHHHHHHH
Confidence 124689999986432 12222346888888888877654
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0049 Score=59.14 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=67.1
Q ss_pred cEEEEeCcCCCCCCCCCH-HHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc---CCCc
Q psy16526 306 KIKPILGDITEPELGISQ-NDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM---THLE 374 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~-~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~ 374 (422)
++.++++|++|.+-.... +.......++|+.||.||..... ...+..+++|+.|+..+..++... .+-.
T Consensus 64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G 143 (282)
T KOG1205|consen 64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG 143 (282)
T ss_pred ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC
Confidence 799999999997521000 00112346899999999986521 233456899999999999988642 1135
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|.+||..+.-. .|..+ +|..||.+-+.+.+.+
T Consensus 144 hIVvisSiaG~~~----------~P~~~--~Y~ASK~Al~~f~etL 177 (282)
T KOG1205|consen 144 HIVVISSIAGKMP----------LPFRS--IYSASKHALEGFFETL 177 (282)
T ss_pred eEEEEeccccccC----------CCccc--ccchHHHHHHHHHHHH
Confidence 8999999866421 23222 6777777666655543
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0048 Score=58.46 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=64.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++.+. .++|+|||+||.... .+.++..+++|+.|+..+++++...
T Consensus 69 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (262)
T PRK07831 69 GRVEAVVCDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRY 142 (262)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999873 223222 367999999996431 1344556889999999998887641
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.+++++||.++.. |..+...|+.+|..-|.+.+.+
T Consensus 143 ~~~~~~~g~iv~~ss~~~~~------------~~~~~~~Y~~sKaal~~~~~~l 184 (262)
T PRK07831 143 MRARGHGGVIVNNASVLGWR------------AQHGQAHYAAAKAGVMALTRCS 184 (262)
T ss_pred HHhcCCCcEEEEeCchhhcC------------CCCCCcchHHHHHHHHHHHHHH
Confidence 1124788888764421 1112346777888777776654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0066 Score=57.83 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=50.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH--- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~--- 368 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|...+.+.+.
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m 131 (263)
T PRK08339 58 VDVSYIVADLTKRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAM 131 (263)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46889999999974 223332 358999999986432 13455668899888776665554
Q ss_pred -hcCCCceEEEEeCCcc
Q psy16526 369 -EMTHLEALIHVSTAYC 384 (422)
Q Consensus 369 -~~~~~~r~v~~SS~~~ 384 (422)
+.+ ..++|++||..+
T Consensus 132 ~~~~-~g~Ii~isS~~~ 147 (263)
T PRK08339 132 ERKG-FGRIIYSTSVAI 147 (263)
T ss_pred HHcC-CCEEEEEcCccc
Confidence 333 468999999764
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0054 Score=66.76 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=67.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|+++++ ++..++ .++|+|||+||.... .+.++..+++|+.|+.++++++.+
T Consensus 470 ~~v~~v~~Dvtd~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 543 (681)
T PRK08324 470 DRALGVACDVTDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRI 543 (681)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36788999999874 223322 368999999996532 133455689999999999887753
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.-.++|++||..+... ....+.|+.+|...|.+++.+
T Consensus 544 l~~~~~~g~iV~vsS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 585 (681)
T PRK08324 544 MKAQGLGGSIVFIASKNAVNP------------GPNFGAYGAAKAAELHLVRQL 585 (681)
T ss_pred HHhcCCCcEEEEECCccccCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 221168999999754321 112457888888888887664
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0062 Score=60.30 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=51.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++.+. .++|++||+||..... +..++.+++|+.|+.++.+++.
T Consensus 56 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~ 129 (330)
T PRK06139 56 AEVLVVPTDVTDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPI 129 (330)
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45778899999874 233332 4689999999864321 3345568999999999888764
Q ss_pred --hcCCCceEEEEeCCccc
Q psy16526 369 --EMTHLEALIHVSTAYCN 385 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~ 385 (422)
+.+ ..++|++||..++
T Consensus 130 ~~~~~-~g~iV~isS~~~~ 147 (330)
T PRK06139 130 FKKQG-HGIFINMISLGGF 147 (330)
T ss_pred HHHcC-CCEEEEEcChhhc
Confidence 323 3589999987543
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0062 Score=58.15 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=49.8
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cCC
Q psy16526 307 IKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MTH 372 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~ 372 (422)
+.++.+|+++++.. ++-.++. ..++|+|||+||.... .+.++..+++|+.|+.++++++.. .+.
T Consensus 52 ~~~~~~D~~~~~~~--~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 129 (272)
T PRK07832 52 PEHRALDISDYDAV--AAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR 129 (272)
T ss_pred ceEEEeeCCCHHHH--HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 45678999987411 0001111 2358999999986432 133456689999999999998752 122
Q ss_pred CceEEEEeCCcc
Q psy16526 373 LEALIHVSTAYC 384 (422)
Q Consensus 373 ~~r~v~~SS~~~ 384 (422)
..++|++||..+
T Consensus 130 ~g~ii~isS~~~ 141 (272)
T PRK07832 130 GGHLVNVSSAAG 141 (272)
T ss_pred CcEEEEEccccc
Confidence 358999998743
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0038 Score=59.75 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=63.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHHhc--C
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCHEM--T 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~--~ 371 (422)
.++.++.+|+++++-. ..-.+.+ ..++|++||+||.... . +.++..+++|+.|+..+++++... .
T Consensus 54 ~~~~~~~~Dl~~~~~~--~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (272)
T PRK08589 54 GKAKAYHVDISDEQQV--KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME 131 (272)
T ss_pred CeEEEEEeecCCHHHH--HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3578899999987411 0011111 2358999999987531 1 234456889999998777776532 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+-.++|++||..+.... | ....|+.+|...+.+++.+
T Consensus 132 ~~g~iv~isS~~~~~~~----------~--~~~~Y~asKaal~~l~~~l 168 (272)
T PRK08589 132 QGGSIINTSSFSGQAAD----------L--YRSGYNAAKGAVINFTKSI 168 (272)
T ss_pred cCCEEEEeCchhhcCCC----------C--CCchHHHHHHHHHHHHHHH
Confidence 12589999997543211 1 1235777887777776654
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0053 Score=57.92 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=47.7
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh---------hhHHHHHHhhHHHHHHHHHHHH---
Q psy16526 308 KPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD---------EALKLSVTINMLGTKRLVELCH--- 368 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~--- 368 (422)
.++.+|+++++ +++.+. .++|+|||+||..... +..++.+++|+.|+..+++.+.
T Consensus 54 ~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 54 LFVPTDVTDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred cEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 57889999874 223332 3679999999865321 2345678899999988887764
Q ss_pred -hcCCCceEEEEeCCc
Q psy16526 369 -EMTHLEALIHVSTAY 383 (422)
Q Consensus 369 -~~~~~~r~v~~SS~~ 383 (422)
+.+ ..++|++||..
T Consensus 128 ~~~~-~g~iv~~sS~~ 142 (255)
T PRK06057 128 VRQG-KGSIINTASFV 142 (255)
T ss_pred HHhC-CcEEEEEcchh
Confidence 233 45899998864
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0073 Score=56.51 Aligned_cols=101 Identities=10% Similarity=0.042 Sum_probs=61.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh----------------hhhHHHHHHhhHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF----------------DEALKLSVTINMLGTKRLVE 365 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~----------------~~~~~~~~~~Nv~gt~~ll~ 365 (422)
.++.++.+|+++++.. ++.++.+ ..++|+|||+||.... .+.....+++|+.|+.++.+
T Consensus 54 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (253)
T PRK08217 54 TEVRGYAANVTDEEDV--EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR 131 (253)
T ss_pred CceEEEEcCCCCHHHH--HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 4678899999986411 0111222 1357999999985321 12344567899999988876
Q ss_pred HHHh----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 366 LCHE----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 366 ~a~~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.. ...-.+++++||...+|.. +...|..+|...|.+++.+
T Consensus 132 ~~~~~l~~~~~~~~iv~~ss~~~~~~~-------------~~~~Y~~sK~a~~~l~~~l 177 (253)
T PRK08217 132 EAAAKMIESGSKGVIINISSIARAGNM-------------GQTNYSASKAGVAAMTVTW 177 (253)
T ss_pred HHHHHHHhcCCCeEEEEEccccccCCC-------------CCchhHHHHHHHHHHHHHH
Confidence 5442 2112468999886543321 2245777887777766554
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0086 Score=56.76 Aligned_cols=101 Identities=16% Similarity=0.000 Sum_probs=59.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC---------h----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK---------F----DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~---------~----~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|++|++-. +.-++.+ ..++|++||+||... + .+.....+++|+.+...+.+.+.
T Consensus 59 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 136 (260)
T PRK08416 59 IKAKAYPLNILEPETY--KELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAA 136 (260)
T ss_pred CceEEEEcCCCCHHHH--HHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 4688999999987411 0011111 236899999997531 1 12334557888888776655543
Q ss_pred h----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 E----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+ ..++|++||..+... .| .+..|+.+|...+.+.+.+
T Consensus 137 ~~~~~~~-~g~iv~isS~~~~~~----------~~--~~~~Y~asK~a~~~~~~~l 179 (260)
T PRK08416 137 KRMEKVG-GGSIISLSSTGNLVY----------IE--NYAGHGTSKAAVETMVKYA 179 (260)
T ss_pred HhhhccC-CEEEEEEeccccccC----------CC--CcccchhhHHHHHHHHHHH
Confidence 3 22 358999999643211 01 1235677777777766554
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0054 Score=57.12 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=63.1
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc---CC-
Q psy16526 307 IKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM---TH- 372 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 372 (422)
+.++.+|+++++-. ++-.+.+ ..++|++||+||.... .+..+..+++|+.|+..+.+.+... .+
T Consensus 48 ~~~~~~D~~~~~~~--~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~ 125 (236)
T PRK06483 48 AQCIQADFSTNAGI--MAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH 125 (236)
T ss_pred CEEEEcCCCCHHHH--HHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC
Confidence 57889999987421 0111222 2358999999986421 1345567899999999887776542 11
Q ss_pred -CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 -LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 -~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||..+.. |...+..|+.+|..-|.+++.+
T Consensus 126 ~~g~iv~~ss~~~~~------------~~~~~~~Y~asKaal~~l~~~~ 162 (236)
T PRK06483 126 AASDIIHITDYVVEK------------GSDKHIAYAASKAALDNMTLSF 162 (236)
T ss_pred CCceEEEEcchhhcc------------CCCCCccHHHHHHHHHHHHHHH
Confidence 24799998854321 1112346888888888777654
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.017 Score=56.49 Aligned_cols=78 Identities=19% Similarity=0.116 Sum_probs=50.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE---- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~---- 369 (422)
.++.++.+|++|++-. +.-.+.+ ..++|++||+||.... .+..+..+++|+.|+..+.+.+..
T Consensus 47 ~~~~~~~~Dl~d~~~v--~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~ 124 (308)
T PLN00015 47 DSYTVMHLDLASLDSV--RQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKK 124 (308)
T ss_pred CeEEEEEecCCCHHHH--HHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4678889999987411 0011112 1358999999987421 124456789999998888666543
Q ss_pred cCC-CceEEEEeCCcc
Q psy16526 370 MTH-LEALIHVSTAYC 384 (422)
Q Consensus 370 ~~~-~~r~v~~SS~~~ 384 (422)
.+. ..++|++||..+
T Consensus 125 ~~~~~g~IV~vsS~~~ 140 (308)
T PLN00015 125 SDYPSKRLIIVGSITG 140 (308)
T ss_pred CCCCCCEEEEEecccc
Confidence 211 258999999754
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.00048 Score=63.25 Aligned_cols=105 Identities=12% Similarity=0.161 Sum_probs=65.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccCh-h-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKF-D-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~-~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.--++..|+.|.. .+++.. +++|..||..|..+. . .+...+.++|+.|.-|+++.|++.+ ++ +..-||
T Consensus 88 ~GPyIy~DILD~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~-iFVPST 159 (366)
T KOG2774|consen 88 VGPYIYLDILDQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LK-VFVPST 159 (366)
T ss_pred cCCchhhhhhccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-ee-Eeeccc
Confidence 3346667877642 234433 478999999887652 2 2333457899999999999999976 54 444788
Q ss_pred CccccCCCc---ccccccCCCCCHHHHHHH-HhhCCHHHhh
Q psy16526 382 AYCNCDREE---VREIIYSPPYDPQKIIET-MEWMDDSLVN 418 (422)
Q Consensus 382 ~~~~g~~~~---~~E~~~~~p~~p~~~y~~-~K~~~E~~~~ 418 (422)
..+.|...| ..+-....|..-|+++|. ++.++|.+-.
T Consensus 160 IGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~h 200 (366)
T KOG2774|consen 160 IGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNH 200 (366)
T ss_pred ccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHh
Confidence 888877543 222222344444554444 3556655433
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.005 Score=60.86 Aligned_cols=94 Identities=22% Similarity=0.388 Sum_probs=58.2
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcccccccc-ccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAA-GKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~-g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
++|++|+||+.|.+.. ..|....-.....++.+. ..| .++.......|.+|||.++++++.++.....
T Consensus 183 g~~~~i~Rpg~v~G~~---~~g~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~vddva~ai~~~~~~~~~----- 251 (367)
T TIGR01746 183 GLPVTIVRPGRILGNS---YTGAINSSDILWRMVKGCLALG---AYPDSPELTEDLTPVDYVARAIVALSSQPAA----- 251 (367)
T ss_pred CCCEEEECCCceeecC---CCCCCCchhHHHHHHHHHHHhC---CCCCCCccccCcccHHHHHHHHHHHHhCCCc-----
Confidence 7999999999999863 334322111111111111 122 2222233467899999999998776522110
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHH
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFE 116 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~ 116 (422)
.....+||++++ ++++|.++.+.+.+
T Consensus 252 --~~~~~~~~v~~~--~~~s~~e~~~~i~~ 277 (367)
T TIGR01746 252 --SAGGPVFHVVNP--EPVSLDEFLEWLER 277 (367)
T ss_pred --ccCCceEEecCC--CCCCHHHHHHHHHH
Confidence 011569999986 78999999998876
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.011 Score=55.76 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=63.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH----hc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH----EM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 370 (422)
.++.++.+|+++++ +++.+ ..++|++||+||.... .+.++..+++|+.|...+.+++. +.
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (259)
T PRK06125 57 VDVAVHALDLSSPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR 130 (259)
T ss_pred CceEEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 46788999999874 23332 3468999999986431 13445668999999999988764 22
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ -.++|++||..+. .|...+..|+.+|..-+.+.+.+
T Consensus 131 ~-~g~iv~iss~~~~------------~~~~~~~~y~ask~al~~~~~~l 167 (259)
T PRK06125 131 G-SGVIVNVIGAAGE------------NPDADYICGSAGNAALMAFTRAL 167 (259)
T ss_pred C-CcEEEEecCcccc------------CCCCCchHhHHHHHHHHHHHHHH
Confidence 2 3579999886331 12223556677777666655543
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.014 Score=63.43 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=63.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH---
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH--- 368 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~--- 368 (422)
++..+.+|++|++ ++..++ .++|+|||+||..... +.++..+++|+.|+..+...+.
T Consensus 466 ~~~~v~~Dvtd~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m 539 (676)
T TIGR02632 466 RAVALKMDVTDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQM 539 (676)
T ss_pred cEEEEECCCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999874 333333 2689999999975421 2344568899999877765443
Q ss_pred -hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 -EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 -~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+.-.++|++||..+... ......|+.+|...|.+++.+
T Consensus 540 ~~~~~~g~IV~iSS~~a~~~------------~~~~~aY~aSKaA~~~l~r~l 580 (676)
T TIGR02632 540 REQGLGGNIVFIASKNAVYA------------GKNASAYSAAKAAEAHLARCL 580 (676)
T ss_pred HhcCCCCEEEEEeChhhcCC------------CCCCHHHHHHHHHHHHHHHHH
Confidence 3221258999999643211 112357888898888887654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.015 Score=55.33 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=61.8
Q ss_pred CcEEEEeCcCCCCCCCCC--HHHHHHH---hcCccEEEEcccccCh------h------------hhHHHHHHhhHHHHH
Q psy16526 305 AKIKPILGDITEPELGIS--QNDQKIL---KQNVSVVFHSAATVKF------D------------EALKLSVTINMLGTK 361 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~--~~~~~~~---~~~~d~ViH~Aa~~~~------~------------~~~~~~~~~Nv~gt~ 361 (422)
.++.++.+|++|++-.-. +...+.. ..++|+|||+||.... . ....+.+++|+.|+.
T Consensus 52 ~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 131 (267)
T TIGR02685 52 NSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPY 131 (267)
T ss_pred CceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHH
Confidence 356678999999752100 0011111 2368999999986431 1 024456899999999
Q ss_pred HHHHHHHhcC---------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 362 RLVELCHEMT---------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 362 ~ll~~a~~~~---------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++++.... ...+++.+||..+. .|..+...|+.+|...|.+.+.+
T Consensus 132 ~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~------------~~~~~~~~Y~asK~a~~~~~~~l 187 (267)
T TIGR02685 132 FLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTD------------QPLLGFTMYTMAKHALEGLTRSA 187 (267)
T ss_pred HHHHHHHHHhhhcccccCCCCeEEEEehhhhcc------------CCCcccchhHHHHHHHHHHHHHH
Confidence 9998765321 01246666654321 12233446788888777777654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.018 Score=55.40 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=60.9
Q ss_pred EEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC-------h----hhhHHHHHHhhHHHHHHHHHHHHhc-CC
Q psy16526 308 KPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK-------F----DEALKLSVTINMLGTKRLVELCHEM-TH 372 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 372 (422)
..+.+|++|++-. ++-.+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+++... ..
T Consensus 58 ~~~~~Dv~d~~~v--~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~ 135 (274)
T PRK08415 58 YVYELDVSKPEHF--KSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND 135 (274)
T ss_pred eEEEecCCCHHHH--HHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc
Confidence 5788999997411 0111222 246899999999642 1 1334567999999999998887642 11
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
-.++|++||..+.. |...+..|..+|..-+.+.+.+
T Consensus 136 ~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~l 171 (274)
T PRK08415 136 GASVLTLSYLGGVK------------YVPHYNVMGVAKAALESSVRYL 171 (274)
T ss_pred CCcEEEEecCCCcc------------CCCcchhhhhHHHHHHHHHHHH
Confidence 25899999864321 1112345777777666555543
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.016 Score=54.90 Aligned_cols=97 Identities=14% Similarity=0.199 Sum_probs=57.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHH--
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELC-- 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a-- 367 (422)
++.++.+|++|++ +.+.+. .++|+|||+||... .. ++..+.+.+|+.++..+...+
T Consensus 49 ~~~~~~~Dv~d~~------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~ 122 (259)
T PRK08340 49 EVYAVKADLSDKD------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQ 122 (259)
T ss_pred CceEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHH
Confidence 5778999999874 223222 46899999999642 11 123344677888766554433
Q ss_pred --HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 --HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 --~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..+-.++|++||..+.. |..+...|+.+|..-+.+.+.+
T Consensus 123 ~~~~~~~~g~iv~isS~~~~~------------~~~~~~~y~~sKaa~~~~~~~l 165 (259)
T PRK08340 123 AWLEKKMKGVLVYLSSVSVKE------------PMPPLVLADVTRAGLVQLAKGV 165 (259)
T ss_pred HHHhcCCCCEEEEEeCcccCC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 2111246899999975431 1112345666776666655543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.018 Score=54.35 Aligned_cols=102 Identities=10% Similarity=0.056 Sum_probs=64.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++-. ++-++.+ ..++|++||+||.... .+.++..+++|+.|+..+.+++...
T Consensus 55 ~~~~~~~~Dl~~~~~v--~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~ 132 (252)
T PRK06079 55 EEDLLVECDVASDESI--ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPL 132 (252)
T ss_pred CceeEEeCCCCCHHHH--HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHh
Confidence 3577899999987411 0011222 2468999999986431 1234556899999999998887652
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+.. |...+..|+.+|..-+.+.+.+
T Consensus 133 ~~~~g~Iv~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~l 171 (252)
T PRK06079 133 LNPGASIVTLTYFGSER------------AIPNYNVMGIAKAALESSVRYL 171 (252)
T ss_pred cccCceEEEEeccCccc------------cCCcchhhHHHHHHHHHHHHHH
Confidence 1125799998864321 1112456777887777766544
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0083 Score=56.95 Aligned_cols=70 Identities=19% Similarity=0.254 Sum_probs=53.4
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
++-+..-|+.|+ +.++++.+..++||++-|.- +....-.+.++|+.+.+.|.+.|++.| ++||||+|+..
T Consensus 110 Qvl~~~fd~~De------dSIr~vvk~sNVVINLIGrd-~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lg 179 (391)
T KOG2865|consen 110 QVLFMKFDLRDE------DSIRAVVKHSNVVINLIGRD-YETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLG 179 (391)
T ss_pred ceeeeccCCCCH------HHHHHHHHhCcEEEEeeccc-cccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcc
Confidence 445555666665 46788888999999998852 222122357899999999999999988 99999999863
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0094 Score=57.30 Aligned_cols=63 Identities=10% Similarity=0.079 Sum_probs=46.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh------cC-ccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK------QN-VSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALI 377 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~------~~-~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v 377 (422)
.+++.+.+|++|++ .+..++ ++ +|.|||+++.... ....+.+++++|++.+ +++||
T Consensus 39 ~~~~~~~~d~~d~~------~l~~a~~~~~~~~g~~d~v~~~~~~~~~----------~~~~~~~~i~aa~~~g-v~~~V 101 (285)
T TIGR03649 39 PNEKHVKFDWLDED------TWDNPFSSDDGMEPEISAVYLVAPPIPD----------LAPPMIKFIDFARSKG-VRRFV 101 (285)
T ss_pred CCCccccccCCCHH------HHHHHHhcccCcCCceeEEEEeCCCCCC----------hhHHHHHHHHHHHHcC-CCEEE
Confidence 45677889999874 345555 56 9999999875321 1235578999999987 99999
Q ss_pred EEeCCcc
Q psy16526 378 HVSTAYC 384 (422)
Q Consensus 378 ~~SS~~~ 384 (422)
|+||..+
T Consensus 102 ~~Ss~~~ 108 (285)
T TIGR03649 102 LLSASII 108 (285)
T ss_pred Eeecccc
Confidence 9998644
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.017 Score=53.59 Aligned_cols=92 Identities=12% Similarity=0.133 Sum_probs=59.7
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh----cCccEEEEcccccC---------h---hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 307 IKPILGDITEPELGISQNDQKILK----QNVSVVFHSAATVK---------F---DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~----~~~d~ViH~Aa~~~---------~---~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
++++.+|+++++ +++.+. +++|++||+|+... + .+.++..+++|+.|+.++++++...
T Consensus 46 ~~~~~~D~~~~~------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 119 (223)
T PRK05884 46 VDAIVCDNTDPA------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDH 119 (223)
T ss_pred CcEEecCCCCHH------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889999874 333332 36899999997421 1 1334566899999999999998652
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-.++|++||... .+ ...|+.+|..-+.+.+.+
T Consensus 120 ~~~~g~Iv~isS~~~-------------~~---~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 120 LRSGGSIISVVPENP-------------PA---GSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred hhcCCeEEEEecCCC-------------CC---ccccHHHHHHHHHHHHHH
Confidence 11258999988530 01 235667777666665543
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.024 Score=54.32 Aligned_cols=100 Identities=9% Similarity=0.072 Sum_probs=62.4
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHHHhc-C
Q psy16526 307 IKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELCHEM-T 371 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 371 (422)
...+.+|++|++-. ++-++.+ ..++|++||+||.... .+.++..+++|+.|+..+++++... .
T Consensus 62 ~~~~~~Dl~~~~~v--~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 139 (272)
T PRK08159 62 FVAGHCDVTDEASI--DAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT 139 (272)
T ss_pred ceEEecCCCCHHHH--HHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 45688999987411 0111222 2358999999986531 1234566899999999999987653 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+-.++|++||..+. .|...+..|+.+|..-+.+.+.+
T Consensus 140 ~~g~Iv~iss~~~~------------~~~p~~~~Y~asKaal~~l~~~l 176 (272)
T PRK08159 140 DGGSILTLTYYGAE------------KVMPHYNVMGVAKAALEASVKYL 176 (272)
T ss_pred CCceEEEEeccccc------------cCCCcchhhhhHHHHHHHHHHHH
Confidence 12589999885331 11112456777777766666544
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.017 Score=60.66 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=63.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC-----h----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK-----F----DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|+++++ +++.+ ..++|++||+||... + .+.++..+++|+.|+..+++++.
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (520)
T PRK06484 51 PDHHALAMDVSDEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREAL 124 (520)
T ss_pred CceeEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35678999999874 22222 246899999998631 1 13455679999999999998887
Q ss_pred hc----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. +.-.++|++||..+.... | ....|..+|...+.+.+.+
T Consensus 125 ~~~~~~~~g~~iv~isS~~~~~~~----------~--~~~~Y~asKaal~~l~~~l 168 (520)
T PRK06484 125 RLMIEQGHGAAIVNVASGAGLVAL----------P--KRTAYSASKAAVISLTRSL 168 (520)
T ss_pred HHHHhcCCCCeEEEECCcccCCCC----------C--CCchHHHHHHHHHHHHHHH
Confidence 53 212389999987543211 1 1235667777666665543
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.021 Score=54.05 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=49.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh---h----hhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF---D----EALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~---~----~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++..+.+|++|++ +++.+ ..++|++||+||.... . +.+...+++|+.|...+++.+.
T Consensus 59 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (265)
T PRK07062 59 ARLLAARCDVLDEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPL 132 (265)
T ss_pred ceEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36788999999974 22222 2468999999996431 1 2345567889888777766653
Q ss_pred --hcCCCceEEEEeCCccc
Q psy16526 369 --EMTHLEALIHVSTAYCN 385 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~ 385 (422)
+.+ ..++|++||..+.
T Consensus 133 ~~~~~-~g~iv~isS~~~~ 150 (265)
T PRK07062 133 LRASA-AASIVCVNSLLAL 150 (265)
T ss_pred HhccC-CcEEEEecccccc
Confidence 332 4689999997553
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=55.97 Aligned_cols=101 Identities=11% Similarity=0.005 Sum_probs=61.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM---- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 370 (422)
.++.++.+|++|++-. .+-++.+ ..++|++||+||.... .+.++..+++|+.|+..+.+++...
T Consensus 64 ~~~~~~~~Dv~~~~~v--~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 141 (286)
T PRK07791 64 GEAVANGDDIADWDGA--ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAE 141 (286)
T ss_pred CceEEEeCCCCCHHHH--HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHh
Confidence 3577889999997411 0111222 2468999999997531 1345567999999999998877521
Q ss_pred C-----CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 T-----HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 ~-----~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
. .-.++|++||..+.... | ....|+.+|..-+.+.+.
T Consensus 142 ~~~~~~~~g~Iv~isS~~~~~~~----------~--~~~~Y~asKaal~~l~~~ 183 (286)
T PRK07791 142 SKAGRAVDARIINTSSGAGLQGS----------V--GQGNYSAAKAGIAALTLV 183 (286)
T ss_pred cccCCCCCcEEEEeCchhhCcCC----------C--CchhhHHHHHHHHHHHHH
Confidence 1 01479999986543111 1 123566666666555544
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.018 Score=54.67 Aligned_cols=101 Identities=9% Similarity=0.078 Sum_probs=62.8
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC-------hh----hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK-------FD----EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~-------~~----~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
++.++.+|++|++-. .+-.+.+ ..++|++||+||... +. +.++..+++|+.|+..+.+++...
T Consensus 60 ~~~~~~~Dl~d~~~v--~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m 137 (258)
T PRK07370 60 PSLFLPCDVQDDAQI--EETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLM 137 (258)
T ss_pred cceEeecCcCCHHHH--HHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHH
Confidence 456889999997411 0011112 236899999999642 11 234556899999999998887542
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-.++|++||..+.. |...+..|+.+|..-+.+.+.+
T Consensus 138 ~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~l 175 (258)
T PRK07370 138 SEGGSIVTLTYLGGVR------------AIPNYNVMGVAKAALEASVRYL 175 (258)
T ss_pred hhCCeEEEEecccccc------------CCcccchhhHHHHHHHHHHHHH
Confidence 1125899999864321 1112446777777766666544
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.018 Score=51.69 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=47.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh----h---hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF----D---EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~----~---~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ ++++++. .++.|||+|+.... + +..+..+..-+.|+.+|.++....
T Consensus 53 ~~v~~~~~Dv~d~~------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~ 126 (181)
T PF08659_consen 53 ARVEYVQCDVTDPE------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR 126 (181)
T ss_dssp -EEEEEE--TTSHH------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CceeeeccCccCHH------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC
Confidence 47899999999973 4444432 46899999987642 1 233455888999999999999885
Q ss_pred CCCceEEEEeCCcc
Q psy16526 371 THLEALIHVSTAYC 384 (422)
Q Consensus 371 ~~~~r~v~~SS~~~ 384 (422)
. ++.||..||..+
T Consensus 127 ~-l~~~i~~SSis~ 139 (181)
T PF08659_consen 127 P-LDFFILFSSISS 139 (181)
T ss_dssp T-TSEEEEEEEHHH
T ss_pred C-CCeEEEECChhH
Confidence 5 899999999743
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.028 Score=55.32 Aligned_cols=104 Identities=17% Similarity=0.161 Sum_probs=63.0
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccCh-----h----hhHHHHHHhhHHHHHHHHHHHHhc---C
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKF-----D----EALKLSVTINMLGTKRLVELCHEM---T 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~-----~----~~~~~~~~~Nv~gt~~ll~~a~~~---~ 371 (422)
++..+.+|+++.... .-+.+.+... ++|++||+||.... . +..+..+++|+.|+.++.+++... .
T Consensus 105 ~~~~~~~Dl~~~~~~-~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~ 183 (320)
T PLN02780 105 QIKTVVVDFSGDIDE-GVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR 183 (320)
T ss_pred EEEEEEEECCCCcHH-HHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 567788899852100 0011222233 35699999987521 1 233456899999999999887531 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+..++|++||..+.... +.| ..+.|+.+|...+.+.+.+
T Consensus 184 ~~g~IV~iSS~a~~~~~--------~~p--~~~~Y~aSKaal~~~~~~L 222 (320)
T PLN02780 184 KKGAIINIGSGAAIVIP--------SDP--LYAVYAATKAYIDQFSRCL 222 (320)
T ss_pred CCcEEEEEechhhccCC--------CCc--cchHHHHHHHHHHHHHHHH
Confidence 24689999997653210 012 2457778887777666554
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.028 Score=53.06 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=42.9
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 308 KPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..+.+|+++.+ +......++|++||+||.... .+++++.+++|+.|+.++++++..
T Consensus 61 ~~~~~D~~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECGKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCCCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56788998863 445566789999999987432 234566799999999999998764
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.038 Score=56.17 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=44.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
++..+.+|++|+ +++.+...++|++||+||..... +..++.+++|+.|+.++++++..
T Consensus 225 ~v~~v~~Dvsd~------~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 225 PVKTLHWQVGQE------AALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CeEEEEeeCCCH------HHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999986 34566677899999999864321 34456799999999999999754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.041 Score=52.18 Aligned_cols=102 Identities=11% Similarity=0.034 Sum_probs=62.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh--------h---hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF--------D---EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++-. ++-.+.+ ..++|++||+||.... . +.....+++|+.++..+.+++...
T Consensus 59 ~~~~~~~~Dv~d~~~v--~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 136 (257)
T PRK08594 59 QESLLLPCDVTSDEEI--TACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKL 136 (257)
T ss_pred CceEEEecCCCCHHHH--HHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 4678899999997421 0111222 2458999999986421 1 123345789999999888777642
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-.++|++||..+.- +.| .+..|+.+|..-+.+.+.+
T Consensus 137 ~~~~g~Iv~isS~~~~~----------~~~--~~~~Y~asKaal~~l~~~l 175 (257)
T PRK08594 137 MTEGGSIVTLTYLGGER----------VVQ--NYNVMGVAKASLEASVKYL 175 (257)
T ss_pred cccCceEEEEcccCCcc----------CCC--CCchhHHHHHHHHHHHHHH
Confidence 1124899999875421 111 2335777777666665543
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.038 Score=52.66 Aligned_cols=97 Identities=13% Similarity=0.090 Sum_probs=60.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
+..++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|...+.++
T Consensus 57 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 130 (262)
T PRK07984 57 SDIVLPCDVAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 130 (262)
T ss_pred CceEeecCCCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence 3567889999974 223222 357999999986421 123345688999999888887
Q ss_pred HHhc-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... ..-.++|++||..+.. |...+..|+.+|..-+.+.+.+
T Consensus 131 ~~~~~~~~g~Iv~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~l 173 (262)
T PRK07984 131 CRSMLNPGSALLTLSYLGAER------------AIPNYNVMGLAKASLEANVRYM 173 (262)
T ss_pred HHHHhcCCcEEEEEecCCCCC------------CCCCcchhHHHHHHHHHHHHHH
Confidence 7542 1124799998864321 1112346777777766666544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.044 Score=51.94 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=61.1
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHHHhc-C
Q psy16526 307 IKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELCHEM-T 371 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 371 (422)
..++.+|++|++-. ++-++.+ ..++|++||+||.... .+.++..+++|+.|+..+.+++... .
T Consensus 62 ~~~~~~D~~~~~~v--~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~ 139 (258)
T PRK07533 62 PIFLPLDVREPGQL--EAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT 139 (258)
T ss_pred ceEEecCcCCHHHH--HHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 45788999987411 0011112 2368999999986421 1344567899999999999987542 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.-.++|++||..+.. +...+..|+.+|..-+.+.+.+
T Consensus 140 ~~g~Ii~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~l 176 (258)
T PRK07533 140 NGGSLLTMSYYGAEK------------VVENYNLMGPVKAALESSVRYL 176 (258)
T ss_pred cCCEEEEEecccccc------------CCccchhhHHHHHHHHHHHHHH
Confidence 124788998854320 1122456777777666555443
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.018 Score=58.09 Aligned_cols=104 Identities=15% Similarity=0.160 Sum_probs=68.1
Q ss_pred CCCCEEEEccceeeeccCCCccccccCC-CCccccc----cccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhh
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNY-NGPTGII----AAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAV 81 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~-~g~~g~~----~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~ 81 (422)
.++|++|+||+.|.+......+| ..+- .+...++ ...-.|.--.+.++++..-|+|-||=|+++++.++-...
T Consensus 200 ~g~~~~ilR~~~vyGp~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~- 277 (386)
T PLN02427 200 NGLEFTIVRPFNWIGPRMDFIPG-IDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA- 277 (386)
T ss_pred cCCceEEecccceeCCCCCcccc-ccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-
Confidence 47999999999999987665554 1110 0111111 122233333456777888899999999999887652110
Q ss_pred hhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 82 KYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 82 ~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++. .++++.++.+.+.+.+.+
T Consensus 278 -------~~~g~~yni~~~~-~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 278 -------RANGHIFNVGNPN-NEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred -------cccCceEEeCCCC-CCccHHHHHHHHHHHhcc
Confidence 1124699998752 489999999999886553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.018 Score=55.92 Aligned_cols=102 Identities=20% Similarity=0.075 Sum_probs=66.9
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccc---ccc--cc-ceeeEE-----eecCCcccccchhHHHHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGII---AAA--GK-GFFRTM-----LCHENKVADLVPVDIVINLMICA 75 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~---~~~--g~-G~lr~~-----~~~~~~~~DiVPvD~vvn~~i~a 75 (422)
.++|++|+||+.|.+...+++.||.-. +...++ ... |. +-+..+ ..+++..-|.|.+|=++.++..+
T Consensus 164 ~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~ 241 (328)
T TIGR01179 164 PGLSYVILRYFNVAGADPEGTIGEDPP--GITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAA 241 (328)
T ss_pred cCCCEEEEecCcccCCCCCCccccCCc--ccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHH
Confidence 689999999999999876665555311 112111 111 11 111111 12456778999999999998877
Q ss_pred HHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 76 AWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 76 a~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+...... ....+||++++ .++|++++.+.+.+.+.
T Consensus 242 ~~~~~~~-------~~~~~~n~~~~--~~~s~~ei~~~~~~~~g 276 (328)
T TIGR01179 242 LEYLLNG-------GESHVYNLGYG--QGFSVLEVIEAFKKVSG 276 (328)
T ss_pred HhhhhcC-------CCcceEEcCCC--CcccHHHHHHHHHHHhC
Confidence 6543211 23469999986 58999999999998764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.017 Score=55.95 Aligned_cols=95 Identities=20% Similarity=0.105 Sum_probs=64.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+....| .+++ ..++.....|..-.+.++++...|.|.||-++.++..+.- +
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~-~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~----~---- 232 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFP-EKLI------PLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE----K---- 232 (317)
T ss_pred hCCCeEEEEeccccCCCCCc-ccHH------HHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc----C----
Confidence 47999999999998854322 1111 1222222333323456788888999999999998766651 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++++.++.+.+.+....
T Consensus 233 --~~~~~~~~~~~~--~~~s~~~~~~~i~~~~~~ 262 (317)
T TIGR01181 233 --GRVGETYNIGGG--NERTNLEVVETILELLGK 262 (317)
T ss_pred --CCCCceEEeCCC--CceeHHHHHHHHHHHhCC
Confidence 122369999887 579999999999987654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.046 Score=51.91 Aligned_cols=99 Identities=14% Similarity=0.051 Sum_probs=60.3
Q ss_pred EEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh------------hhhHHHHHHhhHHHHHHHHHHHHhc-C
Q psy16526 308 KPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF------------DEALKLSVTINMLGTKRLVELCHEM-T 371 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 371 (422)
..+.+|++|++-. ++-++.+ ..++|++||+||.... .+.++..+++|+.|+..+.+++... .
T Consensus 59 ~~~~~Dv~d~~~v--~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~ 136 (260)
T PRK06997 59 LVFPCDVASDEQI--DALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS 136 (260)
T ss_pred ceeeccCCCHHHH--HHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 4678999997411 0011111 2468999999987531 1234456899999999998887652 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+-.++|++||..+.. + .| .+..|+.+|..-+.+.+.+
T Consensus 137 ~~g~Ii~iss~~~~~---~-------~~--~~~~Y~asKaal~~l~~~l 173 (260)
T PRK06997 137 DDASLLTLSYLGAER---V-------VP--NYNTMGLAKASLEASVRYL 173 (260)
T ss_pred CCceEEEEecccccc---C-------CC--CcchHHHHHHHHHHHHHHH
Confidence 125799999864321 0 11 1335677777666655543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.021 Score=56.72 Aligned_cols=95 Identities=18% Similarity=0.086 Sum_probs=65.9
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.|....|- +.+ ..++.....|---.++++++..-|+|-||=++.+++.+.-. .
T Consensus 178 ~~~~~~i~r~~~v~Gp~~~~~-~~~------~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~---~---- 243 (355)
T PRK10217 178 YGLPTLITNCSNNYGPYHFPE-KLI------PLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT---G---- 243 (355)
T ss_pred hCCCeEEEeeeeeeCCCCCcc-cHH------HHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc---C----
Confidence 479999999999999654321 111 11222222332224568899999999999999998776521 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ +++|+.++.+...+...+
T Consensus 244 ---~~~~~yni~~~--~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 244 ---KVGETYNIGGH--NERKNLDVVETICELLEE 272 (355)
T ss_pred ---CCCCeEEeCCC--CcccHHHHHHHHHHHhcc
Confidence 12469999998 689999999988887654
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.038 Score=51.27 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=62.0
Q ss_pred cEEEEeCcCCCCCCCCCH-HHHHHHhcCccEEEEcccccChh-----hhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEE
Q psy16526 306 KIKPILGDITEPELGISQ-NDQKILKQNVSVVFHSAATVKFD-----EALKLSVTINMLGTKRLVELCHEM-THLEALIH 378 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~-~~~~~~~~~~d~ViH~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~ 378 (422)
+++++.+|+++++-.... +.......++|.++|+|+..... +..+..++.|+.++.++++.+... ..-.++|+
T Consensus 54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~ 133 (238)
T PRK05786 54 NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVL 133 (238)
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEE
Confidence 578899999987411000 00111123579999999854211 233455889999999888887653 11257999
Q ss_pred EeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||..+... +..+...|..+|...+.+++.+
T Consensus 134 ~ss~~~~~~-----------~~~~~~~Y~~sK~~~~~~~~~~ 164 (238)
T PRK05786 134 VSSMSGIYK-----------ASPDQLSYAVAKAGLAKAVEIL 164 (238)
T ss_pred Eecchhccc-----------CCCCchHHHHHHHHHHHHHHHH
Confidence 988643211 1123345777777666655443
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.1 Score=49.80 Aligned_cols=78 Identities=19% Similarity=0.261 Sum_probs=53.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHH-HHHhc---CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh---
Q psy16526 304 LAKIKPILGDITEPELGISQNDQ-KILKQ---NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE--- 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~-~~~~~---~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~--- 369 (422)
.-.++++..|+++++-. +.+ .++.. .+|+.|++||...+. +..++.+++|+.++..|-.+...
T Consensus 55 ~v~v~vi~~DLs~~~~~---~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~ 131 (265)
T COG0300 55 GVEVEVIPADLSDPEAL---ERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMV 131 (265)
T ss_pred CceEEEEECcCCChhHH---HHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999998521 111 12222 589999999986532 23346799999998888776543
Q ss_pred -cCCCceEEEEeCCccc
Q psy16526 370 -MTHLEALIHVSTAYCN 385 (422)
Q Consensus 370 -~~~~~r~v~~SS~~~~ 385 (422)
.+ -..+|.++|..++
T Consensus 132 ~~~-~G~IiNI~S~ag~ 147 (265)
T COG0300 132 ERG-AGHIINIGSAAGL 147 (265)
T ss_pred hcC-CceEEEEechhhc
Confidence 22 3579999998664
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.051 Score=50.77 Aligned_cols=79 Identities=9% Similarity=-0.001 Sum_probs=53.9
Q ss_pred CcEEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh----cCC
Q psy16526 305 AKIKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE----MTH 372 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~----~~~ 372 (422)
..+..+.-|++|++-.-. -+.+.+-..++|+++|.||..... ++++.++++|+.|..+...+..- .+
T Consensus 53 ~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~- 131 (246)
T COG4221 53 GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK- 131 (246)
T ss_pred CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-
Confidence 568889999999841100 011222234689999999976421 45667899999999999888653 22
Q ss_pred CceEEEEeCCcc
Q psy16526 373 LEALIHVSTAYC 384 (422)
Q Consensus 373 ~~r~v~~SS~~~ 384 (422)
-..+|.+||..+
T Consensus 132 ~G~IiN~~SiAG 143 (246)
T COG4221 132 SGHIINLGSIAG 143 (246)
T ss_pred CceEEEeccccc
Confidence 348999999754
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.041 Score=52.71 Aligned_cols=99 Identities=9% Similarity=0.062 Sum_probs=59.9
Q ss_pred EEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHHHhc-CC
Q psy16526 308 KPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELCHEM-TH 372 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 372 (422)
..+.+|++|++-. ++-++.+ ...+|++||+||.... .+.++..+++|+.|+.++++++... ..
T Consensus 60 ~~~~~Dv~d~~~v--~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~ 137 (271)
T PRK06505 60 FVLPCDVEDIASV--DAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD 137 (271)
T ss_pred eEEeCCCCCHHHH--HHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc
Confidence 4688999997411 0111222 2468999999996421 1334556889999999998877542 11
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
-.++|++||..+... .| .+..|..+|..-+.+.+.+
T Consensus 138 ~G~Iv~isS~~~~~~----------~~--~~~~Y~asKaAl~~l~r~l 173 (271)
T PRK06505 138 GGSMLTLTYGGSTRV----------MP--NYNVMGVAKAALEASVRYL 173 (271)
T ss_pred CceEEEEcCCCcccc----------CC--ccchhhhhHHHHHHHHHHH
Confidence 247999998643211 11 2345667777666555443
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.047 Score=51.88 Aligned_cols=95 Identities=13% Similarity=0.078 Sum_probs=58.0
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh--------h----hhHHHHHHhhHHHHHHHHHHH
Q psy16526 307 IKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF--------D----EALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~--------~----~~~~~~~~~Nv~gt~~ll~~a 367 (422)
...+++|++|++ +.+.+ ..++|++||+||.... . +.++..+++|+.|+..+.+++
T Consensus 58 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~ 131 (261)
T PRK08690 58 ELVFRCDVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAA 131 (261)
T ss_pred ceEEECCCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHH
Confidence 357899999974 22322 2368999999997531 1 123345788999998888775
Q ss_pred Hhc--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 368 HEM--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 368 ~~~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
... ++-.++|++||..+... .| .+..|+.+|..-+.+.+.
T Consensus 132 ~p~m~~~~g~Iv~iss~~~~~~----------~~--~~~~Y~asKaal~~l~~~ 173 (261)
T PRK08690 132 RPMMRGRNSAIVALSYLGAVRA----------IP--NYNVMGMAKASLEAGIRF 173 (261)
T ss_pred HHHhhhcCcEEEEEcccccccC----------CC--CcccchhHHHHHHHHHHH
Confidence 431 11247899988643211 11 234566677666555543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.025 Score=55.00 Aligned_cols=96 Identities=18% Similarity=0.115 Sum_probs=63.9
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccc-cccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGII-AAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~-~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.++|++|+||+.|.+....| .|-+ .+....+ .....|- ...+.++.+..-|++-||-++++++.++- .
T Consensus 158 ~~~~~~~lR~~~vyG~~~~~-~~~~---~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~----~-- 227 (308)
T PRK11150 158 ANSQICGFRYFNVYGPREGH-KGSM---ASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWE----N-- 227 (308)
T ss_pred cCCCEEEEeeeeecCCCCCC-CCcc---chhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHh----c--
Confidence 47999999999999965432 1211 1111111 1122332 23344677888999999999999877652 1
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
. ...+||++++ .++|+.++.+.+.+...
T Consensus 228 ---~--~~~~yni~~~--~~~s~~el~~~i~~~~~ 255 (308)
T PRK11150 228 ---G--VSGIFNCGTG--RAESFQAVADAVLAYHK 255 (308)
T ss_pred ---C--CCCeEEcCCC--CceeHHHHHHHHHHHhC
Confidence 1 1249999997 57999999999988654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.053 Score=66.58 Aligned_cols=77 Identities=16% Similarity=0.102 Sum_probs=54.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcCCCce
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMTHLEA 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r 375 (422)
.++.++.+|++|.+-. . ..+..+. .++|.|||+||.... .+.++..+++|+.|+.++++++.... .++
T Consensus 2094 ~~v~y~~~DVtD~~av-~-~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-~~~ 2170 (2582)
T TIGR02813 2094 ASAEYASADVTNSVSV-A-ATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-IKL 2170 (2582)
T ss_pred CcEEEEEccCCCHHHH-H-HHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 4678999999997411 0 0111111 258999999997531 13455679999999999999998754 678
Q ss_pred EEEEeCCcc
Q psy16526 376 LIHVSTAYC 384 (422)
Q Consensus 376 ~v~~SS~~~ 384 (422)
+|++||..+
T Consensus 2171 IV~~SSvag 2179 (2582)
T TIGR02813 2171 LALFSSAAG 2179 (2582)
T ss_pred EEEEechhh
Confidence 999999754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.038 Score=51.44 Aligned_cols=61 Identities=13% Similarity=0.198 Sum_probs=45.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|+.|+ +.+.++++++|+||.+-+..+ ..-.....+++++|++.+ +++||+.|.
T Consensus 43 ~g~~vv~~d~~~~------~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~ag-Vk~~v~ss~ 103 (233)
T PF05368_consen 43 LGAEVVEADYDDP------ESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAAG-VKHFVPSSF 103 (233)
T ss_dssp TTTEEEES-TT-H------HHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHHT--SEEEESEE
T ss_pred ccceEeecccCCH------HHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhccc-cceEEEEEe
Confidence 4568899999976 567888999999998877554 222445788999999998 999997554
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.15 Score=47.86 Aligned_cols=78 Identities=9% Similarity=0.031 Sum_probs=47.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHH----Hhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELC----HEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~ 370 (422)
+++.++.+|++|++-. ++-.+.+ ..++|++||+||..... ....+..++|+.+..+++.++ ++.
T Consensus 49 ~~~~~~~~Dv~d~~~v--~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 126 (246)
T PRK05599 49 TSVHVLSFDAQDLDTH--RELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ 126 (246)
T ss_pred CceEEEEcccCCHHHH--HHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 3578899999997521 0111222 24689999999975321 112234667888887665544 222
Q ss_pred CCCceEEEEeCCcc
Q psy16526 371 THLEALIHVSTAYC 384 (422)
Q Consensus 371 ~~~~r~v~~SS~~~ 384 (422)
+.-.++|++||..+
T Consensus 127 ~~~g~Iv~isS~~~ 140 (246)
T PRK05599 127 TAPAAIVAFSSIAG 140 (246)
T ss_pred CCCCEEEEEecccc
Confidence 21258999999754
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.059 Score=51.63 Aligned_cols=92 Identities=17% Similarity=0.267 Sum_probs=58.3
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
++|++|+||++|.+.... .++ ...++-....|. .+...++...+.+-+|-++++++.++-..
T Consensus 139 ~~~~~ilR~~~v~G~~~~------~~~--~~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-------- 200 (287)
T TIGR01214 139 GPNALIVRTSWLYGGGGG------RNF--VRTMLRLAGRGE--ELRVVDDQIGSPTYAKDLARVIAALLQRL-------- 200 (287)
T ss_pred CCCeEEEEeeecccCCCC------CCH--HHHHHHHhhcCC--CceEecCCCcCCcCHHHHHHHHHHHHhhc--------
Confidence 579999999999886521 011 111221112221 12222245668888999999988776221
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ +++|+.++.+...+....
T Consensus 201 -~~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~ 230 (287)
T TIGR01214 201 -ARARGVYHLANS--GQCSWYEFAQAIFEEAGA 230 (287)
T ss_pred -cCCCCeEEEECC--CCcCHHHHHHHHHHHhCc
Confidence 113469999986 689999999999887554
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.1 Score=49.46 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=58.9
Q ss_pred EEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC-------h----hhhHHHHHHhhHHHHHHHHHHHHhc-CC
Q psy16526 308 KPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK-------F----DEALKLSVTINMLGTKRLVELCHEM-TH 372 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 372 (422)
.++.+|++|++-. ++-++.+ ..++|++||+|+... + .+.++..+++|+.|...+++.+... ..
T Consensus 61 ~~~~~Dv~~~~~v--~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~ 138 (260)
T PRK06603 61 FVSELDVTNPKSI--SNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD 138 (260)
T ss_pred eEEEccCCCHHHH--HHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 3578999997421 0111111 245899999998642 1 1234566899999999998876532 11
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
-.++|++||..+.. +.| .+..|+.+|..-+.+.+.+
T Consensus 139 ~G~Iv~isS~~~~~----------~~~--~~~~Y~asKaal~~l~~~l 174 (260)
T PRK06603 139 GGSIVTLTYYGAEK----------VIP--NYNVMGVAKAALEASVKYL 174 (260)
T ss_pred CceEEEEecCcccc----------CCC--cccchhhHHHHHHHHHHHH
Confidence 24899999864321 011 1335666776666555443
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.062 Score=52.90 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=48.0
Q ss_pred HHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 327 KILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 327 ~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+.++++|+|+|+||...- ..+..+.+..|+.++++++++.++.+ ++++|+++|.-+
T Consensus 71 ~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPv 128 (321)
T PTZ00325 71 EKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPV 128 (321)
T ss_pred HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH
Confidence 4567899999999998653 24566778999999999999999987 899999999744
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.05 Score=52.03 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=61.2
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+.. .|++..+... ...+.+ ...++.+...|.|.||-++.++..++ .+
T Consensus 153 ~~~~~~ilR~~~v~G~~----~~~~~~~~~~----~~~~~~---~~~g~~~~~~~~i~v~Dva~~i~~~l----~~---- 213 (292)
T TIGR01777 153 LGTRVVLLRTGIVLGPK----GGALAKMLPP----FRLGLG---GPLGSGRQWFSWIHIEDLVQLILFAL----EN---- 213 (292)
T ss_pred cCCceEEEeeeeEECCC----cchhHHHHHH----HhcCcc---cccCCCCcccccEeHHHHHHHHHHHh----cC----
Confidence 46999999999998842 2332221111 111111 12577888999999999999987765 11
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
++...+||++++ .++|+.|+.+.+.+...
T Consensus 214 --~~~~g~~~~~~~--~~~s~~di~~~i~~~~g 242 (292)
T TIGR01777 214 --ASISGPVNATAP--EPVRNKEFAKALARALH 242 (292)
T ss_pred --cccCCceEecCC--CccCHHHHHHHHHHHhC
Confidence 122358999886 68999999999987664
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.064 Score=50.12 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=64.2
Q ss_pred EEeCcCCCCCCCCCHHHHHHH-------h-cCccEEEEcccccCh-------h----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 309 PILGDITEPELGISQNDQKIL-------K-QNVSVVFHSAATVKF-------D----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~-------~-~~~d~ViH~Aa~~~~-------~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
++.+|+++++ +++.+ . .++|+++|+|+.... . +.+...+++|+.+...+++++..
T Consensus 48 ~~~~D~~~~~------~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PF13561_consen 48 VIQCDLSDEE------SVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP 121 (241)
T ss_dssp EEESCTTSHH------HHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eEeecCcchH------HHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999873 33333 3 578999999987543 1 23455689999999999998854
Q ss_pred c-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ..-.++|++||.... .|...+..|+.+|..-|.+.+.+
T Consensus 122 ~~~~~gsii~iss~~~~------------~~~~~~~~y~~sKaal~~l~r~l 161 (241)
T PF13561_consen 122 LMKKGGSIINISSIAAQ------------RPMPGYSAYSASKAALEGLTRSL 161 (241)
T ss_dssp HHHHEEEEEEEEEGGGT------------SBSTTTHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCcccccchhhc------------ccCccchhhHHHHHHHHHHHHHH
Confidence 2 112579999886432 12234457888888887777654
|
... |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.064 Score=51.99 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=63.7
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccc-eeeE-----EeecCCcccccchhHHHHHHHHHHHHHH
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKG-FFRT-----MLCHENKVADLVPVDIVINLMICAAWKT 79 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G-~lr~-----~~~~~~~~~DiVPvD~vvn~~i~aa~~~ 79 (422)
..+++++|+||+.|.+....+- |.+.++- ..++.....| .+.. .+++++...|++.||-++.++..++-.
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~- 232 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHK-GKMASVA--FHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN- 232 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCC-CCcccHH--HHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-
Confidence 4568999999999999664331 1111100 0111111222 2222 125677788999999999998877633
Q ss_pred hhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 80 AVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 80 ~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
. ...+||++++ .|+|+.|+.+.+.+.+..
T Consensus 233 ~----------~~~~yni~~~--~~~s~~e~~~~i~~~~g~ 261 (314)
T TIGR02197 233 G----------VSGIFNLGTG--RARSFNDLADAVFKALGK 261 (314)
T ss_pred c----------cCceEEcCCC--CCccHHHHHHHHHHHhCC
Confidence 1 2359999887 589999999999887653
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.041 Score=64.80 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=59.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceee-EEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFR-TMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr-~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.|....+. | ....++...-+|... ....+.....|++|||.|+++++.++-...
T Consensus 1167 ~g~~~~i~Rpg~v~G~~~~g~--~-----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~----- 1234 (1389)
T TIGR03443 1167 RGLRGCIVRPGYVTGDSKTGA--T-----NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPP----- 1234 (1389)
T ss_pred CCCCEEEECCCccccCCCcCC--C-----CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCc-----
Confidence 479999999999999754321 2 111222222222110 112244557899999999999887763211
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHH
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFES 117 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~ 117 (422)
......+||++++ .+++|.++.+...+.
T Consensus 1235 --~~~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1235 --KESELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred --ccCCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 0123469999775 578999999988764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.15 Score=48.19 Aligned_cols=100 Identities=12% Similarity=0.055 Sum_probs=59.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC-------hh----hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK-------FD----EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~-------~~----~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
++.++.+|++|++-. ++-.+.+ ..++|++||+||... +. +..+..+++|+.|+..+.+++...
T Consensus 58 ~~~~~~~Dv~~~~~i--~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m 135 (256)
T PRK07889 58 PAPVLELDVTNEEHL--ASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLM 135 (256)
T ss_pred CCcEEeCCCCCHHHH--HHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 567889999997411 0011111 246899999998752 11 233445899999999988887642
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++|+.... +...|..|+.+|..-+.+.+.+
T Consensus 136 ~~~g~Iv~is~~~~~-------------~~~~~~~Y~asKaal~~l~~~l 172 (256)
T PRK07889 136 NEGGSIVGLDFDATV-------------AWPAYDWMGVAKAALESTNRYL 172 (256)
T ss_pred ccCceEEEEeecccc-------------cCCccchhHHHHHHHHHHHHHH
Confidence 112478888753210 1113455677777666655543
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.11 Score=51.46 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=67.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCC-ccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNG-PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g-~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.|....|+-+=-++... ...++..+..|.--.+.++++..-|+|-||-++++++.++-...
T Consensus 167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~----- 241 (347)
T PRK11908 167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKD----- 241 (347)
T ss_pred cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCcc-----
Confidence 579999999999999665442110000000 01122122223222455677888899999999999887663211
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCC
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNP 122 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p 122 (422)
......+||++++ .+++|++++.+.+.+.....|
T Consensus 242 --~~~~g~~yni~~~-~~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 242 --GVASGKIYNIGNP-KNNHSVRELANKMLELAAEYP 275 (347)
T ss_pred --ccCCCCeEEeCCC-CCCcCHHHHHHHHHHHhcCcc
Confidence 0012469999864 468999999999988766544
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.081 Score=52.12 Aligned_cols=59 Identities=15% Similarity=0.030 Sum_probs=49.2
Q ss_pred HHHHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 325 DQKILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 325 ~~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++.+.+.++|+|+|+||...- ..+..+.++.|+..++++.+.+++.+ ..++++++|.=+
T Consensus 79 d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPv 138 (323)
T PLN00106 79 QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPV 138 (323)
T ss_pred CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 346678899999999998664 34566778999999999999999987 889999998644
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.077 Score=52.72 Aligned_cols=101 Identities=15% Similarity=0.061 Sum_probs=65.2
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.|....|-.+. .. -...++..+..|---.+.++++..-|+|=||=++++++.++-...
T Consensus 183 ~~~~~~~lR~~~vyGp~~~~~~~~-~~--~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~------ 253 (348)
T PRK15181 183 YEFNAIGLRYFNVFGRRQNPNGAY-SA--VIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTND------ 253 (348)
T ss_pred hCCCEEEEEecceeCcCCCCCCcc-cc--CHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccc------
Confidence 479999999999999654322110 00 001111112223223466888888999999999999876552110
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
......+||++++ .++|+.|+.+.+.+...
T Consensus 254 -~~~~~~~yni~~g--~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 254 -LASKNKVYNVAVG--DRTSLNELYYLIRDGLN 283 (348)
T ss_pred -ccCCCCEEEecCC--CcEeHHHHHHHHHHHhC
Confidence 0123469999987 57999999999987554
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.1 Score=51.63 Aligned_cols=94 Identities=14% Similarity=0.046 Sum_probs=64.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccc-cccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTG-IIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g-~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.|....| .+... ++.....|.--.++++++..-|.|-||-++.+++.+.- +
T Consensus 185 ~g~~~vilr~~~v~Gp~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~----~--- 249 (352)
T PRK10084 185 YGLPTIVTNCSNNYGPYHFP--------EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVT----E--- 249 (352)
T ss_pred hCCCEEEEeccceeCCCcCc--------cchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHh----c---
Confidence 47999999999998854321 11111 22222223333467888999999999999999876651 1
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ ++.++.++.+...+...+
T Consensus 250 ---~~~~~~yni~~~--~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 250 ---GKAGETYNIGGH--NEKKNLDVVLTICDLLDE 279 (352)
T ss_pred ---CCCCceEEeCCC--CcCcHHHHHHHHHHHhcc
Confidence 123469999987 589999999988876653
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.13 Score=49.66 Aligned_cols=73 Identities=21% Similarity=0.306 Sum_probs=51.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh---------cCccEEEEcccccChh--------hhHHHHHHhhHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK---------QNVSVVFHSAATVKFD--------EALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~---------~~~d~ViH~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++..-++-|+++++- ++++. .+--.|||+||...+. ++++...++|..||.++..+
T Consensus 75 s~rl~t~~LDVT~~es------i~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~ 148 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPES------VKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKA 148 (322)
T ss_pred CCcceeEeeccCCHHH------HHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHH
Confidence 6788888999999852 23332 1346899999965321 45566799999998877555
Q ss_pred H----HhcCCCceEEEEeCCcc
Q psy16526 367 C----HEMTHLEALIHVSTAYC 384 (422)
Q Consensus 367 a----~~~~~~~r~v~~SS~~~ 384 (422)
. |++. .|+|++||..+
T Consensus 149 ~lpLlr~ar--GRvVnvsS~~G 168 (322)
T KOG1610|consen 149 FLPLLRRAR--GRVVNVSSVLG 168 (322)
T ss_pred HHHHHHhcc--CeEEEeccccc
Confidence 4 4443 59999999755
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.16 Score=49.93 Aligned_cols=116 Identities=17% Similarity=0.201 Sum_probs=68.7
Q ss_pred cCcCcEEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccChh-----hhHHHHHHhhHHHHHHHHHHH----HhcC
Q psy16526 302 NELAKIKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVKFD-----EALKLSVTINMLGTKRLVELC----HEMT 371 (422)
Q Consensus 302 ~~~~~v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a----~~~~ 371 (422)
....++.++++|+++..-... .+.+.+.....|+.|+.||..... +..+..+.+|..|...|.++. +...
T Consensus 83 ~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~ 162 (314)
T KOG1208|consen 83 KANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA 162 (314)
T ss_pred CCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC
Confidence 445678899999998742100 011222234579999999986533 224556889999987776554 4443
Q ss_pred CCceEEEEeCCccccCCCccccccc-CCC-CCHHHHHHHHhhCCHHHhhh
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIY-SPP-YDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~-~~p-~~p~~~y~~~K~~~E~~~~~ 419 (422)
..|+|++||... +.....+.-.. ... .+....|+.||....-...+
T Consensus 163 -~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~e 210 (314)
T KOG1208|consen 163 -PSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANE 210 (314)
T ss_pred -CCCEEEEcCccc-cCccchhhccchhccCccchhHHHHhHHHHHHHHHH
Confidence 379999999754 22111111000 112 44555788888876554443
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.13 Score=53.05 Aligned_cols=95 Identities=12% Similarity=0.005 Sum_probs=63.9
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+....+-.|- -...++.....|---.++++.+..-|++=||=++.+++.++- +
T Consensus 280 ~g~~~~ilR~~~vyGp~~~~~~~~-----~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e----~---- 346 (442)
T PLN02206 280 ANVEVRIARIFNTYGPRMCIDDGR-----VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME----G---- 346 (442)
T ss_pred hCCCeEEEEeccccCCCCCccccc-----hHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHh----c----
Confidence 479999999999988543221111 011122222222222467888888899999999999887651 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
. ...+||++++ +++|+.|+.+...+...
T Consensus 347 -~--~~g~yNIgs~--~~~sl~Elae~i~~~~g 374 (442)
T PLN02206 347 -E--HVGPFNLGNP--GEFTMLELAKVVQETID 374 (442)
T ss_pred -C--CCceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 1 2348999987 58999999999988764
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.33 Score=45.31 Aligned_cols=102 Identities=12% Similarity=0.141 Sum_probs=62.7
Q ss_pred CcEEEEeCcCCC-CCCCCCHHHHHHH---hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHhcCC
Q psy16526 305 AKIKPILGDITE-PELGISQNDQKIL---KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHEMTH 372 (422)
Q Consensus 305 ~~v~~v~gDl~~-~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~ 372 (422)
..+.+...|+++ ++-. ....+.+ ..++|+++|+||... +. +..+..+++|+.|...+.+++...-.
T Consensus 57 ~~~~~~~~Dvs~~~~~v--~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 134 (251)
T COG1028 57 GRAAAVAADVSDDEESV--EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK 134 (251)
T ss_pred CcEEEEEecCCCCHHHH--HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence 467788899997 4210 0011112 234899999999742 22 34456799999999999985554221
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
-+++|.+||..+. ..... +..|..+|..-+.+.+.+
T Consensus 135 ~~~Iv~isS~~~~-~~~~~-----------~~~Y~~sK~al~~~~~~l 170 (251)
T COG1028 135 KQRIVNISSVAGL-GGPPG-----------QAAYAASKAALIGLTKAL 170 (251)
T ss_pred hCeEEEECCchhc-CCCCC-----------cchHHHHHHHHHHHHHHH
Confidence 1289999997654 21111 556777777666655543
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.26 Score=48.87 Aligned_cols=101 Identities=13% Similarity=0.016 Sum_probs=63.9
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++++||+-|.+... +.++ ++ ...++.....|-. ...++++..-|++-||=+|++++.++-+....
T Consensus 177 ~~i~~~~lR~~~vyGp~~-~~~~---~~--~~~~~~~~~~g~~-~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~---- 245 (349)
T TIGR02622 177 HGIKIASARAGNVIGGGD-WAED---RL--IPDVIRAFSSNKI-VIIRNPDATRPWQHVLEPLSGYLLLAEKLFTG---- 245 (349)
T ss_pred CCCcEEEEccCcccCCCc-chhh---hh--hHHHHHHHhcCCC-eEECCCCcccceeeHHHHHHHHHHHHHHHhhc----
Confidence 379999999999988431 1010 11 1122222223322 23457788899999999999988776433211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
......+||++|+...+.+..++.+.+.+...
T Consensus 246 -~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 246 -QAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred -CccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 11113599999876579999999988877544
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.38 Score=46.39 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=68.5
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
+++|-.+++||+.|.|-...- + ...+.-.+..|......++++...|++=|+=|+.+.+.|+-......+
T Consensus 168 g~~l~t~~lRP~~IyGp~d~~-------~--~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~- 237 (280)
T PF01073_consen 168 GGRLRTCALRPAGIYGPGDQR-------L--VPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGK- 237 (280)
T ss_pred ccceeEEEEeccEEeCccccc-------c--cchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccc-
Confidence 457999999999999843211 1 111222334566667788889999999999999999988855432200
Q ss_pred CCCCCCceEEEccCCCCCCcc-HhhHHHHHHHHhh
Q psy16526 86 SNGAQGITVYNCCTGQRNPIS-WKQFVNYSFESMR 119 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t-~~~~~~~~~~~~~ 119 (422)
........|+|+.+ .|+. +.++...+.+...
T Consensus 238 -~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G 269 (280)
T PF01073_consen 238 -PERVAGQAYFITDG--EPVPSFWDFMRPLWEALG 269 (280)
T ss_pred -cccCCCcEEEEECC--CccCcHHHHHHHHHHHCC
Confidence 01235679999987 5888 8888766665433
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.47 Score=46.27 Aligned_cols=100 Identities=6% Similarity=0.014 Sum_probs=58.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcc-ccc-------Chh----hhHHHHHHhhHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSA-ATV-------KFD----EALKLSVTINMLGTKRLVE 365 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~A-a~~-------~~~----~~~~~~~~~Nv~gt~~ll~ 365 (422)
.++.++.+|+++++ +.+.+. .++|++||+| +.. .+. +...+.+++|+.|+..+.+
T Consensus 67 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 140 (305)
T PRK08303 67 GRGIAVQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSH 140 (305)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence 35678999999874 222222 3689999999 632 111 2234567889999988887
Q ss_pred HHHhc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 366 LCHEM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 366 ~a~~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++... .+-.++|++||..+.... .+......|+.+|..-+.+.+.
T Consensus 141 ~~lp~m~~~~~g~IV~isS~~~~~~~---------~~~~~~~~Y~asKaal~~lt~~ 188 (305)
T PRK08303 141 FALPLLIRRPGGLVVEITDGTAEYNA---------THYRLSVFYDLAKTSVNRLAFS 188 (305)
T ss_pred HHHHHhhhCCCcEEEEECCccccccC---------cCCCCcchhHHHHHHHHHHHHH
Confidence 77542 112589999885331100 0111233577777665555543
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.023 Score=56.19 Aligned_cols=101 Identities=17% Similarity=0.259 Sum_probs=60.5
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccc-cceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAG-KGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g-~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+||+.||||+.|+|..+ .|=.+.-...+=++.++- +|++ -+.+...|++|||.|+.++.+.+-..+.+..--
T Consensus 186 GLpv~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~----P~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l 258 (382)
T COG3320 186 GLPVTIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIA----PDSEYSLDMLPVDHVARAVVAPSVQVAEAIAAL 258 (382)
T ss_pred CCCeEEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCC----CCcccchhhCccceeeEEeehhhhhHHHHHHHh
Confidence 68999999999999887 454444334443333222 2422 234777899999988887766555544110000
Q ss_pred C--CCCCceEEEccCCCCCCccHhhHHHHHHH
Q psy16526 87 N--GAQGITVYNCCTGQRNPISWKQFVNYSFE 116 (422)
Q Consensus 87 ~--~~~~~~vy~~~ss~~np~t~~~~~~~~~~ 116 (422)
. .+..-..|| .....+.+...++.+....
T Consensus 259 ~~~~~~~f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 259 GAHSDIRFNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred ccCccchhhhee-cccCCCccchhHHHHhHhh
Confidence 0 011123566 4556678888888877665
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.3 Score=49.11 Aligned_cols=94 Identities=9% Similarity=0.111 Sum_probs=63.1
Q ss_pred CCCCEEEEccceeeeccCCC-ccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEP-VAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP-~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|.+|+||+.|.+....+ +..|. +-....|..-.++++++...+++-+|=++++++.++-..
T Consensus 199 ~~l~~~ilRp~~vyG~~~~~~~~~~~---------~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~------ 263 (378)
T PLN00016 199 LGVNWTSFRPQYIYGPGNNKDCEEWF---------FDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNP------ 263 (378)
T ss_pred cCCCeEEEeceeEECCCCCCchHHHH---------HHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCc------
Confidence 47999999999998864321 11121 111122322245677888889999999999887765211
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++|+.++.+.+.+....
T Consensus 264 ---~~~~~~yni~~~--~~~s~~el~~~i~~~~g~ 293 (378)
T PLN00016 264 ---KAAGQIFNIVSD--RAVTFDGMAKACAKAAGF 293 (378)
T ss_pred ---cccCCEEEecCC--CccCHHHHHHHHHHHhCC
Confidence 122479999986 589999999999886553
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.25 Score=49.67 Aligned_cols=96 Identities=9% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCC-Ccccccccccc-ceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYN-GPTGIIAAAGK-GFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~-g~~g~~~~~g~-G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.++|++|+||+.|.+... .|-++-. -+..++..... +---.++++++..-|+|=||=++.++..++- .
T Consensus 185 ~g~~~~ilR~~~vyGp~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~----~-- 254 (370)
T PLN02695 185 FGIECRIGRFHNIYGPFG----TWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK----S-- 254 (370)
T ss_pred hCCCEEEEEECCccCCCC----CccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh----c--
Confidence 479999999999998432 2221111 12222221111 2223567888889999999999998776531 1
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ +++++.++.+.+.+...
T Consensus 255 -----~~~~~~nv~~~--~~~s~~el~~~i~~~~g 282 (370)
T PLN02695 255 -----DFREPVNIGSD--EMVSMNEMAEIALSFEN 282 (370)
T ss_pred -----cCCCceEecCC--CceeHHHHHHHHHHHhC
Confidence 12358999886 68999999999876543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.25 Score=47.66 Aligned_cols=98 Identities=12% Similarity=0.130 Sum_probs=62.4
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCcccccc----cccccee-eEEeecCCcccccchhHHHHHHHHHHHHHHhh
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIA----AAGKGFF-RTMLCHENKVADLVPVDIVINLMICAAWKTAV 81 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~----~~g~G~l-r~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~ 81 (422)
.++|++|+||+.|.+... ...+ ++-.....++. +...|.- ..++++++..-|.|-||=|+++++.++-..
T Consensus 148 ~~~~~~~~R~~~vyG~~~-~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~-- 222 (306)
T PLN02725 148 YGWDAISGMPTNLYGPHD-NFHP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRY-- 222 (306)
T ss_pred hCCCEEEEEecceeCCCC-CCCC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcc--
Confidence 479999999999998642 1111 00000111111 1112322 223778888889999999999987765211
Q ss_pred hhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 82 KYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 82 ~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
.....||++++ .++|+.++.+.+.+.+.
T Consensus 223 --------~~~~~~ni~~~--~~~s~~e~~~~i~~~~~ 250 (306)
T PLN02725 223 --------SGAEHVNVGSG--DEVTIKELAELVKEVVG 250 (306)
T ss_pred --------ccCcceEeCCC--CcccHHHHHHHHHHHhC
Confidence 12357899876 68999999999988764
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.79 Score=42.57 Aligned_cols=77 Identities=9% Similarity=-0.011 Sum_probs=45.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hc-CccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHh---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQ-NVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHE--- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~-~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~--- 369 (422)
.++..+.+|+++++-. . +-++.+ .. ++|++||+||... +. +...+.+++|+.++..+++.+..
T Consensus 54 ~~~~~~~~D~~~~~~~-~-~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~ 131 (227)
T PRK08862 54 DNVYSFQLKDFSQESI-R-HLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMR 131 (227)
T ss_pred CCeEEEEccCCCHHHH-H-HHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3466788999886411 0 011111 23 6899999997432 11 23344567888888777655432
Q ss_pred -cCCCceEEEEeCCc
Q psy16526 370 -MTHLEALIHVSTAY 383 (422)
Q Consensus 370 -~~~~~r~v~~SS~~ 383 (422)
.++-..+|++||..
T Consensus 132 ~~~~~g~Iv~isS~~ 146 (227)
T PRK08862 132 KRNKKGVIVNVISHD 146 (227)
T ss_pred hcCCCceEEEEecCC
Confidence 22125899999853
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.24 Score=50.95 Aligned_cols=95 Identities=11% Similarity=0.061 Sum_probs=63.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+....+..|.+ ...++.....|---.++++++..-|+|=||=++++++.++ . .
T Consensus 281 ~~l~~~ilR~~~vYGp~~~~~~~~~-----i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~-~---~---- 347 (436)
T PLN02166 281 AGVEVRIARIFNTYGPRMCLDDGRV-----VSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM-E---G---- 347 (436)
T ss_pred hCCCeEEEEEccccCCCCCCCccch-----HHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH-h---c----
Confidence 4799999999999996533211100 1112222222323356788888889999999999987665 1 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ +++|+.++.+.+.+...
T Consensus 348 ---~~~giyNIgs~--~~~Si~ela~~I~~~~g 375 (436)
T PLN02166 348 ---EHVGPFNLGNP--GEFTMLELAEVVKETID 375 (436)
T ss_pred ---CCCceEEeCCC--CcEeHHHHHHHHHHHhC
Confidence 12359999886 68999999999988764
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.49 Score=46.25 Aligned_cols=78 Identities=12% Similarity=0.014 Sum_probs=49.7
Q ss_pred CccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCCccccCCCcccccccCCCCC
Q psy16526 332 NVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPYD 401 (422)
Q Consensus 332 ~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~ 401 (422)
++|++||+||... +. +.++..+++|+.|...+.+++... ..-.++|++||..+... .|.
T Consensus 120 ~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~----------~p~- 188 (303)
T PLN02730 120 SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERI----------IPG- 188 (303)
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCC----------CCC-
Confidence 5899999996421 11 345567999999999998887653 11158999998654211 111
Q ss_pred HHHHHHHHhhCCHHHhhhc
Q psy16526 402 PQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 402 p~~~y~~~K~~~E~~~~~~ 420 (422)
....|..+|..-+.+.+.+
T Consensus 189 ~~~~Y~asKaAl~~l~~~l 207 (303)
T PLN02730 189 YGGGMSSAKAALESDTRVL 207 (303)
T ss_pred CchhhHHHHHHHHHHHHHH
Confidence 0125777777776666544
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.25 Score=49.93 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=51.3
Q ss_pred CccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhh
Q psy16526 332 NVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEW 411 (422)
Q Consensus 332 ~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~ 411 (422)
...+++-+++-..-.++......+-..|++|+++||+.+| ++|+|++||..+.-.. .+ ++...-.+.+..+|.
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~---~~---~~~~~~~~~~~~~k~ 225 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFN---QP---PNILLLNGLVLKAKL 225 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccC---CC---chhhhhhhhhhHHHH
Confidence 3456666665443222122345688899999999999988 9999999886443111 11 112222445667889
Q ss_pred CCHHHhhh
Q psy16526 412 MDDSLVNT 419 (422)
Q Consensus 412 ~~E~~~~~ 419 (422)
+.|+++++
T Consensus 226 ~~e~~~~~ 233 (411)
T KOG1203|consen 226 KAEKFLQD 233 (411)
T ss_pred hHHHHHHh
Confidence 99988763
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.68 Score=44.17 Aligned_cols=63 Identities=21% Similarity=0.134 Sum_probs=41.6
Q ss_pred CccEEEEcccccC----hhhh-HHHHHHhhHHHHHHHHHHHHhcCC-CceEEEEeCCccccC--CCccccc
Q psy16526 332 NVSVVFHSAATVK----FDEA-LKLSVTINMLGTKRLVELCHEMTH-LEALIHVSTAYCNCD--REEVREI 394 (422)
Q Consensus 332 ~~d~ViH~Aa~~~----~~~~-~~~~~~~Nv~gt~~ll~~a~~~~~-~~r~v~~SS~~~~g~--~~~~~E~ 394 (422)
++|+|||+||..= +... .++..+.=+.+|+.|.++..+... .+.++-.|...-||+ ...++|+
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~ 126 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEE 126 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecC
Confidence 7999999999642 3333 345688889999999999885542 344444444333444 4567886
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=90.89 E-value=0.54 Score=45.29 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=52.3
Q ss_pred cEEEEeCcCCCCCCC-CCHHHHHHHhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH----hcCCC
Q psy16526 306 KIKPILGDITEPELG-ISQNDQKILKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH----EMTHL 373 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~-l~~~~~~~~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~ 373 (422)
++..+.+|+++++-. ...+..++-...+|++++.||.+.. ++..+..+++|+.|......+-. +.. -
T Consensus 87 ~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~ 165 (300)
T KOG1201|consen 87 EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-N 165 (300)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-C
Confidence 578899999997411 0111222233478999999998752 13345679999999877665543 322 3
Q ss_pred ceEEEEeCCccc
Q psy16526 374 EALIHVSTAYCN 385 (422)
Q Consensus 374 ~r~v~~SS~~~~ 385 (422)
.++|-++|+.+.
T Consensus 166 GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 166 GHIVTIASVAGL 177 (300)
T ss_pred ceEEEehhhhcc
Confidence 589999998664
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=90.70 E-value=0.91 Score=44.50 Aligned_cols=56 Identities=25% Similarity=0.176 Sum_probs=42.0
Q ss_pred cCCcccccchhHHHHHHHHHHHHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 55 HENKVADLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 55 ~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+.+...|+|=||=++++++.++-..... ....+||++++ .++|+.|+.+.+.+...
T Consensus 226 ~g~~~~~~v~v~D~a~~~~~~~~~~~~~-------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T PRK10675 226 DGTGVRDYIHVMDLADGHVAAMEKLANK-------PGVHIYNLGAG--VGSSVLDVVNAFSKACG 281 (338)
T ss_pred CCcEEEeeEEHHHHHHHHHHHHHhhhcc-------CCCceEEecCC--CceeHHHHHHHHHHHhC
Confidence 4567789999999999988776331111 12369999987 68999999999988654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=90.64 E-value=0.75 Score=45.37 Aligned_cols=106 Identities=17% Similarity=0.055 Sum_probs=62.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccC-C-CCccccccccccce--eeEEee------cCCcccccchhHHHHHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDN-Y-NGPTGIIAAAGKGF--FRTMLC------HENKVADLVPVDIVINLMICAA 76 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn-~-~g~~g~~~~~g~G~--lr~~~~------~~~~~~DiVPvD~vvn~~i~aa 76 (422)
.+++++|+||+-|.+......-|.-.+ + ++...++.....|- .-.+.+ +++..-|.|=||=++++++.++
T Consensus 175 ~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~ 254 (352)
T PLN02240 175 PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAAL 254 (352)
T ss_pred CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHH
Confidence 468999999988777442111111000 0 01111121111121 112333 5677789999999999988777
Q ss_pred HHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 77 WKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
.....+ ......+||++++ .++|++|+.+.+.+...
T Consensus 255 ~~~~~~-----~~~~~~~yni~~~--~~~s~~el~~~i~~~~g 290 (352)
T PLN02240 255 RKLFTD-----PDIGCEAYNLGTG--KGTSVLEMVAAFEKASG 290 (352)
T ss_pred hhhhhc-----cCCCCceEEccCC--CcEeHHHHHHHHHHHhC
Confidence 543221 1122369999987 58999999999988654
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=90.59 E-value=0.67 Score=42.91 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=63.2
Q ss_pred ccCcCcEEEEeCcCCCCCC-CCCHHHHHHH--hcCccEEEEcccccCh----h----hhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 301 SNELAKIKPILGDITEPEL-GISQNDQKIL--KQNVSVVFHSAATVKF----D----EALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 301 ~~~~~~v~~v~gDl~~~~~-~l~~~~~~~~--~~~~d~ViH~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
...++++++++.|++..+- .=...+.+.+ .++.|..++.||.... . ..+-+.+++|+.|+..+.+.+.
T Consensus 50 ~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lP 129 (249)
T KOG1611|consen 50 SKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLP 129 (249)
T ss_pred hccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHH
Confidence 3456899999999987541 1001123333 3477999999997531 1 1233568999999887765432
Q ss_pred ---hcC----------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 369 ---EMT----------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 369 ---~~~----------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
+.. ....+|++||..+. .......+..+|+.+|.+.....+
T Consensus 130 LLkkaas~~~gd~~s~~raaIinisS~~~s---------~~~~~~~~~~AYrmSKaAlN~f~k 183 (249)
T KOG1611|consen 130 LLKKAASKVSGDGLSVSRAAIINISSSAGS---------IGGFRPGGLSAYRMSKAALNMFAK 183 (249)
T ss_pred HHHHHhhcccCCcccccceeEEEeeccccc---------cCCCCCcchhhhHhhHHHHHHHHH
Confidence 211 01268888886432 001233445577777765544443
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=89.85 E-value=0.56 Score=43.50 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=66.1
Q ss_pred cccCcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 300 RSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 300 ~~~~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.......+.+++||.-..+.. ...+.++..++-+++-.+ +...+.++|=....+-..+|++.+ +++|+|+
T Consensus 91 l~sw~~~vswh~gnsfssn~~------k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~g-v~~fvyI 160 (283)
T KOG4288|consen 91 LSSWPTYVSWHRGNSFSSNPN------KLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKAG-VPRFVYI 160 (283)
T ss_pred hhCCCcccchhhccccccCcc------hhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHcC-CceEEEE
Confidence 344456788899988655422 455667888888876533 333456677777778888899987 9999999
Q ss_pred eCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|-... -..|..|.+ |=..|..+|..+...
T Consensus 161 Sa~d~-----------~~~~~i~rG-Y~~gKR~AE~Ell~~ 189 (283)
T KOG4288|consen 161 SAHDF-----------GLPPLIPRG-YIEGKREAEAELLKK 189 (283)
T ss_pred Ehhhc-----------CCCCccchh-hhccchHHHHHHHHh
Confidence 86411 024556664 444788888777654
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=89.44 E-value=0.92 Score=44.94 Aligned_cols=90 Identities=13% Similarity=0.071 Sum_probs=56.1
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.|....|. ..+....++....|-... . ++..-|+|=||=|+++++.++-+ .
T Consensus 179 ~g~~~v~lRp~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~-~------ 242 (342)
T PLN02214 179 KGVDLVVLNPVLVLGPPLQPT------INASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEA-P------ 242 (342)
T ss_pred cCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhC-c------
Confidence 379999999999999654321 111111111112222111 2 23456999999999998877621 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
.....||++++ +.++.++.+.+.+..
T Consensus 243 ---~~~g~yn~~~~---~~~~~el~~~i~~~~ 268 (342)
T PLN02214 243 ---SASGRYLLAES---ARHRGEVVEILAKLF 268 (342)
T ss_pred ---ccCCcEEEecC---CCCHHHHHHHHHHHC
Confidence 11237998763 679999999998865
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=88.93 E-value=1.1 Score=48.63 Aligned_cols=106 Identities=9% Similarity=0.013 Sum_probs=66.1
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCcc-ccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPT-GIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~-g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.|....+....-.+-.+.. .++.....|---.+.++++..-|.|=||=++++++.++-...
T Consensus 481 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~----- 555 (660)
T PRK08125 481 EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKD----- 555 (660)
T ss_pred cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccc-----
Confidence 36999999999999865432211100000111 111222223223456788888999999999999877762110
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
......+||++++ .+++++.++.+.+.+....
T Consensus 556 --~~~~g~iyni~~~-~~~~s~~el~~~i~~~~g~ 587 (660)
T PRK08125 556 --NRCDGQIINIGNP-DNEASIRELAEMLLASFEK 587 (660)
T ss_pred --cccCCeEEEcCCC-CCceeHHHHHHHHHHHhcc
Confidence 0113469999986 3479999999999887654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=88.78 E-value=1.4 Score=43.02 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=55.2
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|.+|+||+.+... .+..+. ..++ .+. ......++...+.|-||=|++++..+.-.
T Consensus 135 ~~l~~tilRp~~~~~~-------~~~~~~--~~~~----~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~-------- 192 (317)
T CHL00194 135 SGIPYTIFRLAGFFQG-------LISQYA--IPIL----EKQ-PIWITNESTPISYIDTQDAAKFCLKSLSL-------- 192 (317)
T ss_pred cCCCeEEEeecHHhhh-------hhhhhh--hhhc----cCC-ceEecCCCCccCccCHHHHHHHHHHHhcC--------
Confidence 5799999999954321 111000 0000 011 12234456667889999999987665511
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
......+||++++ .++|++|+.+.+.+...+
T Consensus 193 -~~~~~~~~ni~g~--~~~s~~el~~~~~~~~g~ 223 (317)
T CHL00194 193 -PETKNKTFPLVGP--KSWNSSEIISLCEQLSGQ 223 (317)
T ss_pred -ccccCcEEEecCC--CccCHHHHHHHHHHHhCC
Confidence 1123469999987 689999999999886543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.44 E-value=1.4 Score=42.31 Aligned_cols=98 Identities=24% Similarity=0.287 Sum_probs=65.0
Q ss_pred CCCCEEEEccceeeeccCCCc-cccccCCCCccccccccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPV-AGWVDNYNGPTGIIAAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~-pGWidn~~g~~g~~~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.++|++|+||+.|.+....|. ++|. ..+++.-...|. ...+.++.+..-+++=||=++.+++.++ .+
T Consensus 160 ~~~~~~ilR~~~vyGp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~----~~-- 228 (314)
T COG0451 160 YGLPVVILRPFNVYGPGDKPDLSSGV-----VSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL----EN-- 228 (314)
T ss_pred hCCCeEEEeeeeeeCCCCCCCCCcCc-----HHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHH----hC--
Confidence 479999999998888555443 2211 111221123343 3566677777777777888888877766 21
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcC
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQN 121 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~ 121 (422)
+... +||++++. .+.+.+++.+...+.....
T Consensus 229 ----~~~~-~~ni~~~~-~~~~~~e~~~~~~~~~~~~ 259 (314)
T COG0451 229 ----PDGG-VFNIGSGT-AEITVRELAEAVAEAVGSK 259 (314)
T ss_pred ----CCCc-EEEeCCCC-CcEEHHHHHHHHHHHhCCC
Confidence 1223 99999975 5889999999998866543
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=88.17 E-value=1 Score=46.46 Aligned_cols=101 Identities=10% Similarity=0.080 Sum_probs=65.1
Q ss_pred CCCCEEEEccceeeeccCCCc--cccc-cCC------CCcc-ccccccccceeeEEeecCCcccccchhHHHHHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPV--AGWV-DNY------NGPT-GIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAA 76 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~--pGWi-dn~------~g~~-g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa 76 (422)
.++|++|+||+.|.|....+. +-++ ..+ .+.. .++..+..|.--.++++++..-|+|=||=||++++.++
T Consensus 246 ~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al 325 (442)
T PLN02572 246 WGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAI 325 (442)
T ss_pred cCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHH
Confidence 479999999999999664331 1111 111 1111 12223333433346788888889999999999988876
Q ss_pred HHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHH
Q psy16526 77 WKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFES 117 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~ 117 (422)
-.... .....+||+++ .++|++++.+.+.+.
T Consensus 326 ~~~~~-------~g~~~i~Nigs---~~~si~el~~~i~~~ 356 (442)
T PLN02572 326 ANPAK-------PGEFRVFNQFT---EQFSVNELAKLVTKA 356 (442)
T ss_pred hChhh-------cCceeEEEeCC---CceeHHHHHHHHHHH
Confidence 32111 12236899965 369999999999886
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=88.02 E-value=1.6 Score=39.61 Aligned_cols=75 Identities=16% Similarity=0.156 Sum_probs=52.0
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc----C
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM----T 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~ 371 (422)
....+.+|+.+++-. +..+++. ...++++++|||+++. .+++++...+|+.|+..+.+++.+. +
T Consensus 63 ~h~aF~~DVS~a~~v--~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~ 140 (256)
T KOG1200|consen 63 DHSAFSCDVSKAHDV--QNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ 140 (256)
T ss_pred ccceeeeccCcHHHH--HHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc
Confidence 345678999987411 0112222 2368999999999862 2566778999999999999888653 1
Q ss_pred -CCceEEEEeCC
Q psy16526 372 -HLEALIHVSTA 382 (422)
Q Consensus 372 -~~~r~v~~SS~ 382 (422)
+.-++|.+||.
T Consensus 141 ~~~~sIiNvsSI 152 (256)
T KOG1200|consen 141 QQGLSIINVSSI 152 (256)
T ss_pred CCCceEEeehhh
Confidence 12379999996
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=87.91 E-value=0.79 Score=40.84 Aligned_cols=75 Identities=13% Similarity=0.063 Sum_probs=53.8
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
..+.+..+..|..+- +++....+++|+.|-+-|.++-....+.++++.-+-...+.++|++.| ++.|+.+||.
T Consensus 60 t~k~v~q~~vDf~Kl------~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~ 132 (238)
T KOG4039|consen 60 TDKVVAQVEVDFSKL------SQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSA 132 (238)
T ss_pred ccceeeeEEechHHH------HHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEecc
Confidence 345556666676654 244556679999998888776544444556666667788889999977 9999999997
Q ss_pred cc
Q psy16526 383 YC 384 (422)
Q Consensus 383 ~~ 384 (422)
..
T Consensus 133 GA 134 (238)
T KOG4039|consen 133 GA 134 (238)
T ss_pred CC
Confidence 43
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=87.71 E-value=1.1 Score=43.41 Aligned_cols=76 Identities=18% Similarity=0.248 Sum_probs=47.1
Q ss_pred EEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccC---hh----hhHHHHHHhhHHHHHHHHHHHHhc-CC---Cc
Q psy16526 307 IKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVK---FD----EALKLSVTINMLGTKRLVELCHEM-TH---LE 374 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~---~~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~---~~ 374 (422)
+.+.-+|+.|.+-.=. .+.++.+.--+|.+|||||..- +. ...+...++|..||.|++.++... .. ..
T Consensus 86 v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g 165 (331)
T KOG1210|consen 86 VSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLG 165 (331)
T ss_pred eeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCc
Confidence 6688899977541100 0011222235799999998642 11 223445889999999999887542 21 23
Q ss_pred eEEEEeCC
Q psy16526 375 ALIHVSTA 382 (422)
Q Consensus 375 r~v~~SS~ 382 (422)
+++.+||.
T Consensus 166 ~I~~vsS~ 173 (331)
T KOG1210|consen 166 RIILVSSQ 173 (331)
T ss_pred EEEEehhh
Confidence 88999886
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=87.43 E-value=1 Score=41.37 Aligned_cols=77 Identities=25% Similarity=0.267 Sum_probs=52.4
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcc-ccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPT-GIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~-g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
++|++|+||+.|.+.. .| ..+..+.. .++..+-+|---.++++++...|++-||=++.+++.++-+..
T Consensus 159 ~~~~~~~R~~~vyG~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~------ 227 (236)
T PF01370_consen 159 GLRVTILRPPNVYGPG-NP----NNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK------ 227 (236)
T ss_dssp TSEEEEEEESEEESTT-SS----SSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC------
T ss_pred cccccccccccccccc-cc----ccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC------
Confidence 8999999999999966 11 11122222 233333456556778899999999999999999877762221
Q ss_pred CCCCCceEEEcc
Q psy16526 87 NGAQGITVYNCC 98 (422)
Q Consensus 87 ~~~~~~~vy~~~ 98 (422)
....+||++
T Consensus 228 ---~~~~~yNig 236 (236)
T PF01370_consen 228 ---AAGGIYNIG 236 (236)
T ss_dssp ---TTTEEEEES
T ss_pred ---CCCCEEEeC
Confidence 145799874
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=87.20 E-value=2.5 Score=41.18 Aligned_cols=79 Identities=10% Similarity=0.014 Sum_probs=48.9
Q ss_pred cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCCccccCCCcccccccCCCC
Q psy16526 331 QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPY 400 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~ 400 (422)
.++|++||+||... +. +.++..+++|+.|+.++.+++... ..-.+++.+||..+... .|.
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~----------~p~ 187 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRA----------VPG 187 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCc----------CCC
Confidence 35899999997531 11 344566899999999999988753 11246888887543211 111
Q ss_pred CHHHHHHHHhhCCHHHhhhc
Q psy16526 401 DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 401 ~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+.|..+|..-+.+.+.+
T Consensus 188 ~-~~~Y~asKaAl~~lt~~l 206 (299)
T PRK06300 188 Y-GGGMSSAKAALESDTKVL 206 (299)
T ss_pred c-cHHHHHHHHHHHHHHHHH
Confidence 0 024677777666655443
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=87.11 E-value=2.4 Score=42.94 Aligned_cols=91 Identities=11% Similarity=0.106 Sum_probs=55.6
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcc-cccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKV-ADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~-~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
..++|.+|+||+.+.+ +++|.++ ..-.|..-.+.++++.. .+.|=+|=++.+++.++-+.
T Consensus 207 ~~gl~~tIlRp~~~~~----~~~~~~~----------~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~----- 267 (390)
T PLN02657 207 DSDFTYSIVRPTAFFK----SLGGQVE----------IVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE----- 267 (390)
T ss_pred cCCCCEEEEccHHHhc----ccHHHHH----------hhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc-----
Confidence 4689999999998764 2222221 11223333456766643 34455666666665554211
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ ..++|+.|+.+.+.+...+
T Consensus 268 ----~~~~~~~~Iggp-~~~~S~~Eia~~l~~~lG~ 298 (390)
T PLN02657 268 ----SKINKVLPIGGP-GKALTPLEQGEMLFRILGK 298 (390)
T ss_pred ----cccCCEEEcCCC-CcccCHHHHHHHHHHHhCC
Confidence 123469999863 3578999999999887654
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=86.61 E-value=2 Score=39.92 Aligned_cols=77 Identities=13% Similarity=0.175 Sum_probs=54.2
Q ss_pred CccEEEEcccccC-----h-----hhhHHHHHHhhHHHHHHHHHHHHhc-CC---CceEEEEeCCccccCCCcccccccC
Q psy16526 332 NVSVVFHSAATVK-----F-----DEALKLSVTINMLGTKRLVELCHEM-TH---LEALIHVSTAYCNCDREEVREIIYS 397 (422)
Q Consensus 332 ~~d~ViH~Aa~~~-----~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~---~~r~v~~SS~~~~g~~~~~~E~~~~ 397 (422)
+-|.|||.||... + ...++.+++.|+.+...|...+... .+ .+.+|++||... .
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa------------v 149 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA------------V 149 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh------------h
Confidence 4599999998753 1 1345667999999999998877542 11 267999998643 2
Q ss_pred CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 398 PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 398 ~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.|.+.-+.|..+|++-+.+...+
T Consensus 150 ~p~~~wa~yc~~KaAr~m~f~~l 172 (253)
T KOG1204|consen 150 RPFSSWAAYCSSKAARNMYFMVL 172 (253)
T ss_pred ccccHHHHhhhhHHHHHHHHHHH
Confidence 57777788888887776665443
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=86.50 E-value=2.6 Score=42.13 Aligned_cols=96 Identities=20% Similarity=0.166 Sum_probs=68.6
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
+++|-.+.+||++|-| || | -.-...+..+.-+|......++.+..-|.++++=|+-+-|.|+.....+.
T Consensus 170 ~~~l~T~aLR~~~IYG------pg--d-~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~-- 238 (361)
T KOG1430|consen 170 SDDLYTCALRPPGIYG------PG--D-KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS-- 238 (361)
T ss_pred CCCeeEEEEccccccC------CC--C-ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC--
Confidence 4679999999999877 22 1 12223455666778888899999999999999999999888887655221
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHH
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFE 116 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~ 116 (422)
......+|+++.+ +|+..-++.....+
T Consensus 239 --~~~~Gq~yfI~d~--~p~~~~~~~~~l~~ 265 (361)
T KOG1430|consen 239 --PSVNGQFYFITDD--TPVRFFDFLSPLVK 265 (361)
T ss_pred --CccCceEEEEeCC--CcchhhHHHHHHHH
Confidence 3346789999987 66654444444443
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=86.42 E-value=0.88 Score=43.95 Aligned_cols=94 Identities=15% Similarity=0.170 Sum_probs=58.1
Q ss_pred CEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCCCC
Q psy16526 10 PVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSNGA 89 (422)
Q Consensus 10 Pi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~~ 89 (422)
-..|+|+|.|.+.....+..|+.+.- ..| ..+....+.....+.|+-++..++..+-..... .
T Consensus 142 ~~~IlR~~~~~g~~~~~~~~~~~~~~---------~~~--~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~------~ 204 (286)
T PF04321_consen 142 NALILRTSWVYGPSGRNFLRWLLRRL---------RQG--EPIKLFDDQYRSPTYVDDLARVILELIEKNLSG------A 204 (286)
T ss_dssp SEEEEEE-SEESSSSSSHHHHHHHHH---------HCT--SEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-------G
T ss_pred CEEEEecceecccCCCchhhhHHHHH---------hcC--CeeEeeCCceeCCEEHHHHHHHHHHHHHhcccc------c
Confidence 68999999999874444444442211 111 123445566778899999999988887554431 1
Q ss_pred CCceEEEccCCCCCCccHhhHHHHHHHHhhcCC
Q psy16526 90 QGITVYNCCTGQRNPISWKQFVNYSFESMRQNP 122 (422)
Q Consensus 90 ~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p 122 (422)
....|||++++ .+++|.++.+...+.+...+
T Consensus 205 ~~~Giyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 205 SPWGIYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp GG-EEEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred ccceeEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 23579999997 67999999999998877655
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=86.26 E-value=2 Score=41.29 Aligned_cols=82 Identities=12% Similarity=0.171 Sum_probs=50.6
Q ss_pred cCcEEEEeCcCCCCCCC--CCHHHHHHHhcCccEEEEcccccChh--------hhHHHHHHhhHHH-HHHHHHHHHhc--
Q psy16526 304 LAKIKPILGDITEPELG--ISQNDQKILKQNVSVVFHSAATVKFD--------EALKLSVTINMLG-TKRLVELCHEM-- 370 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~--l~~~~~~~~~~~~d~ViH~Aa~~~~~--------~~~~~~~~~Nv~g-t~~ll~~a~~~-- 370 (422)
..++..+.+|+++++-. +-+...+....+.|++++.||..... +.++..+++|+.| +.++..+|...
T Consensus 59 ~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~ 138 (270)
T KOG0725|consen 59 GGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLK 138 (270)
T ss_pred CCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHH
Confidence 46788999999876311 00011111134589999999875421 2345568999995 67776666543
Q ss_pred -CCCceEEEEeCCccc
Q psy16526 371 -THLEALIHVSTAYCN 385 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~ 385 (422)
++-..++++||..+.
T Consensus 139 ~~~gg~I~~~ss~~~~ 154 (270)
T KOG0725|consen 139 KSKGGSIVNISSVAGV 154 (270)
T ss_pred hcCCceEEEEeccccc
Confidence 123568888887543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.96 E-value=1 Score=50.06 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=56.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+.. .+.|+..+.+ ......++.+...|+|=||=|+++++.+.-..
T Consensus 116 ~gl~~vILRp~~VYGP~---~~~~i~~ll~-----------~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~------- 174 (854)
T PRK05865 116 CGLEWVAVRCALIFGRN---VDNWVQRLFA-----------LPVLPAGYADRVVQVVHSDDAQRLLVRALLDT------- 174 (854)
T ss_pred cCCCEEEEEeceEeCCC---hHHHHHHHhc-----------CceeccCCCCceEeeeeHHHHHHHHHHHHhCC-------
Confidence 47999999999998842 2344443221 10111244555668999999999987665211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHH
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFE 116 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~ 116 (422)
.....+||++++ +++|+.++.+...+
T Consensus 175 --~~~ggvyNIgsg--~~~Si~EIae~l~~ 200 (854)
T PRK05865 175 --VIDSGPVNLAAP--GELTFRRIAAALGR 200 (854)
T ss_pred --CcCCCeEEEECC--CcccHHHHHHHHhh
Confidence 112358999987 67899999988765
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=84.89 E-value=2.4 Score=41.64 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=52.7
Q ss_pred CCCCEEEEccceeeeccCCCc-cccccCCCCccccccccccceeeEEee-c----CCcccccchhHHHHHHHHHHHHHHh
Q psy16526 7 GNLPVAIVRPSIVISSVNEPV-AGWVDNYNGPTGIIAAAGKGFFRTMLC-H----ENKVADLVPVDIVINLMICAAWKTA 80 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~-pGWidn~~g~~g~~~~~g~G~lr~~~~-~----~~~~~DiVPvD~vvn~~i~aa~~~~ 80 (422)
.++|++|+||+.|.|....+. |.++ +++.....|---.+.+ + .+...|.|-||-+|++++.++-. .
T Consensus 186 ~~~~~~~~R~~~vyGp~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~-~ 257 (338)
T PLN00198 186 NNIDLITVIPTLMAGPSLTSDIPSSL-------SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK-E 257 (338)
T ss_pred cCceEEEEeCCceECCCccCCCCCcH-------HHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC-c
Confidence 479999999999999654321 1111 1111111111111111 1 12235999999999998777522 1
Q ss_pred hhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 81 VKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 81 ~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
....+|+ +++ .++++.++.+.+.+..
T Consensus 258 ---------~~~~~~~-~~~--~~~s~~el~~~i~~~~ 283 (338)
T PLN00198 258 ---------SASGRYI-CCA--ANTSVPELAKFLIKRY 283 (338)
T ss_pred ---------CcCCcEE-Eec--CCCCHHHHHHHHHHHC
Confidence 1123575 444 4689999999887654
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=84.27 E-value=3.5 Score=38.34 Aligned_cols=80 Identities=10% Similarity=0.160 Sum_probs=51.6
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChhhhHHHHHHhhHHHHHH----HHHHHHh-cC-CC
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFDEALKLSVTINMLGTKR----LVELCHE-MT-HL 373 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~----ll~~a~~-~~-~~ 373 (422)
....+.|++.|+++.. ++. +.++.. ...+|++|+-||... +.+.+....+|..|..| .|....+ .+ .-
T Consensus 53 p~~~v~F~~~DVt~~~-~~~-~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~G 129 (261)
T KOG4169|consen 53 PSVSVIFIKCDVTNRG-DLE-AAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKG 129 (261)
T ss_pred CCceEEEEEeccccHH-HHH-HHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCC
Confidence 3467899999999853 111 112222 246799999999865 55777778888776555 4444432 22 23
Q ss_pred ceEEEEeCCccc
Q psy16526 374 EALIHVSTAYCN 385 (422)
Q Consensus 374 ~r~v~~SS~~~~ 385 (422)
.-+|-.||.++.
T Consensus 130 GiIvNmsSv~GL 141 (261)
T KOG4169|consen 130 GIIVNMSSVAGL 141 (261)
T ss_pred cEEEEecccccc
Confidence 468889998764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=84.19 E-value=3 Score=40.47 Aligned_cols=90 Identities=18% Similarity=0.141 Sum_probs=55.9
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+....|..+. ..+.+.....|.- ..++...|.|-||=|+++++.++-.
T Consensus 180 ~~~~~~~lRp~~v~Gp~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva~a~~~~~~~-------- 241 (322)
T PLN02662 180 NGIDMVTINPAMVIGPLLQPTLNT------SAEAILNLINGAQ----TFPNASYRWVDVRDVANAHIQAFEI-------- 241 (322)
T ss_pred cCCcEEEEeCCcccCCCCCCCCCc------hHHHHHHHhcCCc----cCCCCCcCeEEHHHHHHHHHHHhcC--------
Confidence 479999999999998655443111 1111111111210 1134567999999999998776511
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+.....||++ + .++++.++.+.+.+...
T Consensus 242 --~~~~~~~~~~-g--~~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 242 --PSASGRYCLV-E--RVVHYSEVVKILHELYP 269 (322)
T ss_pred --cCcCCcEEEe-C--CCCCHHHHHHHHHHHCC
Confidence 1112367875 3 47999999999887643
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=84.18 E-value=2.8 Score=40.80 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=56.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+....|..+.. ..++..+..|.- +.+ +...+.|=||=|+++++.++-..
T Consensus 181 ~~~~~~~lrp~~v~Gp~~~~~~~~~------~~~~~~~~~g~~--~~~--~~~~~~v~v~Dva~a~~~al~~~------- 243 (322)
T PLN02986 181 NGIDMVVLNPGFICGPLLQPTLNFS------VELIVDFINGKN--LFN--NRFYRFVDVRDVALAHIKALETP------- 243 (322)
T ss_pred hCCeEEEEcccceeCCCCCCCCCcc------HHHHHHHHcCCC--CCC--CcCcceeEHHHHHHHHHHHhcCc-------
Confidence 3799999999999997655522111 112222222211 112 33468899999999987776211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||+ ++ .++|++++.+.+.+.+.
T Consensus 244 ---~~~~~yni-~~--~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 244 ---SANGRYII-DG--PIMSVNDIIDILRELFP 270 (322)
T ss_pred ---ccCCcEEE-ec--CCCCHHHHHHHHHHHCC
Confidence 11237998 44 37999999999988754
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=83.18 E-value=2.7 Score=40.92 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=55.0
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+....|..+. ...++.....|-. ..+ ...-|++-||=|+++++.++-..
T Consensus 182 ~~~~~~ilR~~~vyGp~~~~~~~~------~~~~i~~~~~~~~--~~~--~~~r~~i~v~Dva~a~~~~l~~~------- 244 (325)
T PLN02989 182 NEIDLIVLNPGLVTGPILQPTLNF------SVAVIVELMKGKN--PFN--TTHHRFVDVRDVALAHVKALETP------- 244 (325)
T ss_pred cCCeEEEEcCCceeCCCCCCCCCc------hHHHHHHHHcCCC--CCC--CcCcCeeEHHHHHHHHHHHhcCc-------
Confidence 479999999999999765543211 1112211111210 011 12347899999999987775211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
....+||+ ++ .++|++++.+.+.+.+
T Consensus 245 ---~~~~~~ni-~~--~~~s~~ei~~~i~~~~ 270 (325)
T PLN02989 245 ---SANGRYII-DG--PVVTIKDIENVLREFF 270 (325)
T ss_pred ---ccCceEEE-ec--CCCCHHHHHHHHHHHC
Confidence 11248999 44 2799999999998865
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=80.22 E-value=6.9 Score=37.29 Aligned_cols=90 Identities=12% Similarity=0.150 Sum_probs=56.0
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|.+|+||+.+......+. +. .+ + ...|.+ +.+.++...+.|-++=++.++..+.-+
T Consensus 126 ~gi~~tilRp~~f~~~~~~~~--~~------~~-~--~~~~~~--~~~~g~~~~~~v~~~Dva~~~~~~l~~-------- 184 (285)
T TIGR03649 126 GGVEYTVLRPTWFMENFSEEF--HV------EA-I--RKENKI--YSATGDGKIPFVSADDIARVAYRALTD-------- 184 (285)
T ss_pred cCCCEEEEeccHHhhhhcccc--cc------cc-c--ccCCeE--EecCCCCccCcccHHHHHHHHHHHhcC--------
Confidence 489999999986653221110 00 00 0 122332 344567788899999898876555411
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
......+|+++.+ .++|+.|+.+.+.+...+
T Consensus 185 -~~~~~~~~~l~g~--~~~s~~eia~~l~~~~g~ 215 (285)
T TIGR03649 185 -KVAPNTDYVVLGP--ELLTYDDVAEILSRVLGR 215 (285)
T ss_pred -CCcCCCeEEeeCC--ccCCHHHHHHHHHHHhCC
Confidence 1122468998876 689999999998886554
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 8e-21
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 6/132 (4%)
Query: 288 FIDLLFDQLRQERSNELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE 347
F + LR + +++ + GD +EP+LG+ Q + L + V ++ SAA V
Sbjct: 123 FDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFP 182
Query: 348 ALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIE 407
+L N+ GT L+ + L+ +VSTA E ++I
Sbjct: 183 YHEL-FGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSA----FTEDADIRVIS 236
Query: 408 TMEWMDDSLVNT 419
+D
Sbjct: 237 PTRTVDGGWAGG 248
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 5e-13
Identities = 18/137 (13%), Positives = 47/137 (34%), Gaps = 21/137 (15%)
Query: 5 ESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAA--------GKGFFRTMLCHE 56
+ LPVA+ R ++++ + AG ++ + T ++ + + +
Sbjct: 265 DLCALPVAVFRCGMILA--DTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQ 322
Query: 57 NKVADLVPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFE 116
D +PV V + + A + G Y+ + I ++ +
Sbjct: 323 RAHFDGLPVTFVAEAIAVLGARVA-----GSSLAGFATYHVMNPHDDGIGLDEY----VD 373
Query: 117 SMRQN--PLSHITWYPD 131
+ + P+ I + +
Sbjct: 374 WLIEAGYPIRRIDDFAE 390
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 9/81 (11%), Positives = 26/81 (32%), Gaps = 14/81 (17%)
Query: 306 KIKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKFDEAL-KLSVTINMLGTK 361
+ + + ++ + L+ + + V SA + V + T
Sbjct: 57 EPECRVAEMLDHAG---------LERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTN 107
Query: 362 RLVELCHEMTHLEALIHVSTA 382
C + + +++V +A
Sbjct: 108 PFYAACLQA-RVPRILYVGSA 127
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 42/163 (25%)
Query: 9 LPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIV 68
LPV I P +V+ G +D +I A G G + +++
Sbjct: 174 LPVVIGIPGMVL--------GELDIGPTTGRVITAIGNGEMTHYV---AGQRNVIDAAEA 222
Query: 69 INLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNPLSHITW 128
++ A G G Y TG + E + Q +
Sbjct: 223 GRGLLMAL---------ERGRIGER-YL-LTGH--NLEMADLTRRIAELLGQPAPQPM-- 267
Query: 129 YPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGKKPFMVR 171
++ A + A + L ++G+ P +
Sbjct: 268 ---------SMAMARAL-------ATLGRLRYRVSGQLPLLDE 294
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 21/116 (18%)
Query: 310 ILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALK---LSVTINMLGTKRLVEL 366
IT+ L L+ VFH A ++ N L T +L E
Sbjct: 83 SETSITDDAL------LASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYER 136
Query: 367 CHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTLTP 422
L+ +++ + I +D K T E SL N +P
Sbjct: 137 LKHFKRLKKVVYSAAG----------CSIAEKTFDDAK--ATEETDIVSLHNNDSP 180
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 422 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.37 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.33 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.31 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.3 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.29 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.29 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.29 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.28 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.27 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.27 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.27 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.26 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.26 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.25 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.25 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.25 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.24 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.24 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.23 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.23 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.23 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.23 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.22 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.22 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.22 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.22 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.21 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.21 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.21 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.21 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.2 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.2 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.2 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.2 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.18 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.17 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.16 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.16 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.15 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.15 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.15 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.15 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.14 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.14 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.14 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.13 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.13 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.13 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.11 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.1 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.09 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.09 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.08 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.07 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.04 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.03 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.03 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.02 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.02 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.02 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.01 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 98.99 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 98.91 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 98.88 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.86 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 98.86 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 98.8 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.79 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.75 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 98.69 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 98.69 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 98.68 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 98.65 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 98.63 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 98.61 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.55 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 98.53 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.53 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.48 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.48 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 98.46 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 98.46 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.42 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.38 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.35 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 98.35 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.34 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.33 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.33 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.33 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.32 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.3 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.3 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.29 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.29 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.28 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.27 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.27 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.26 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.25 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.25 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.25 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.25 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.25 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.25 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.24 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.24 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.24 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.22 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.21 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.21 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.21 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.2 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.2 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.2 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.2 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.19 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.19 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.19 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.19 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.19 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.18 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.18 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.17 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.17 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.17 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.16 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.16 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.16 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.16 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.16 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.16 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.15 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.15 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.15 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.15 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.14 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.14 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.14 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.13 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 98.13 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.12 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.12 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.12 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.12 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.11 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.11 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.11 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.11 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.11 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.09 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.09 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.09 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.09 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.09 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.08 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.08 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.08 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.07 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.07 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 98.06 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.06 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.06 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.06 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.06 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.06 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.05 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.05 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.04 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.04 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.04 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.04 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.04 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.04 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.04 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.03 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.02 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.02 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.02 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.01 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.01 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.01 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.01 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.01 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 97.99 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 97.99 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.98 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 97.98 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.98 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.98 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 97.98 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.97 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 97.97 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 97.97 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.97 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.97 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.97 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.97 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.97 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.96 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.96 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.96 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 97.96 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.96 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 97.96 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 97.95 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.95 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.95 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.94 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.94 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 97.94 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 97.93 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 97.93 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 97.92 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 97.92 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 97.92 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.91 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 97.91 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 97.9 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.9 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.9 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.9 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 97.9 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 97.89 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 97.89 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 97.89 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.89 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.89 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.89 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.88 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.88 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 97.88 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.88 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.88 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 97.87 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 97.87 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 97.87 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.87 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 97.87 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 97.87 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 97.87 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.87 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.86 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 97.86 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.85 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.85 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.85 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.85 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 97.85 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.85 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.85 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.84 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.84 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.84 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.84 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.83 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 97.82 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.82 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.82 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.82 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 97.8 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.8 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.8 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 97.79 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.79 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 97.79 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 97.78 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.77 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.77 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 97.77 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.75 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.74 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 97.74 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.74 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 97.71 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 97.69 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 97.69 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.67 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 97.66 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.64 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 97.58 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 97.56 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.52 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.49 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 97.49 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.46 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.44 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.35 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.26 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.23 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 97.05 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 96.98 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 96.95 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 96.83 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 96.82 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 96.79 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 96.78 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 96.75 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 96.74 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 96.69 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 96.68 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 96.66 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 96.58 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 96.55 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 96.53 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 96.47 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 96.43 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 96.43 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 96.43 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 96.42 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 96.41 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 96.4 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 96.37 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 96.31 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.3 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 96.23 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 96.23 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 96.22 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 96.14 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 96.06 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 96.05 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.01 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 95.97 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 95.92 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 95.87 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 95.84 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 95.81 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 95.8 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 95.75 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 95.72 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 95.69 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.66 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 95.62 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 95.55 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 95.55 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 95.45 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 95.42 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 95.4 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 95.38 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 95.34 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 95.34 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 95.34 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 95.2 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 95.2 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 95.1 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 95.07 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 95.05 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 94.96 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 94.93 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 94.84 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 94.82 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 94.57 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 94.53 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 94.28 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 94.27 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 94.16 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 93.9 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 93.89 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 93.81 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 93.44 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 93.41 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 93.33 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 93.3 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 93.27 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 93.18 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 93.1 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 92.69 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 92.56 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 92.56 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 92.34 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 92.13 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 91.79 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 91.09 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 90.35 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 90.28 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 89.86 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 89.78 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 89.68 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 89.35 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 89.33 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 89.19 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 89.1 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 89.08 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 88.3 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 86.92 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 86.38 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 85.33 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 84.4 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 84.23 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 84.21 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 83.93 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 83.73 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 82.59 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 81.42 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 81.27 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 81.23 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=128.08 Aligned_cols=106 Identities=13% Similarity=0.120 Sum_probs=87.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
++++++.||++|+ +++..+++++|+|||+||..+.. .++.+.+++|+.||.+++++|++.+ +++|||+||
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS 151 (351)
T 3ruf_A 79 SRFCFIEGDIRDL------TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAAS 151 (351)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred CceEEEEccCCCH------HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEec
Confidence 6899999999987 46778888999999999987644 3445678999999999999999987 899999999
Q ss_pred CccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|. ..+++|+. |.+|.+.|+.+|+.+|+++..+
T Consensus 152 ~~vyg~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 189 (351)
T 3ruf_A 152 SSTYGDHPALPKVEEN---IGNPLSPYAVTKYVNEIYAQVY 189 (351)
T ss_dssp GGGGTTCCCSSBCTTC---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCccCC---CCCCCChhHHHHHHHHHHHHHH
Confidence 988875 34678854 4455667889999999988764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=127.24 Aligned_cols=106 Identities=21% Similarity=0.192 Sum_probs=83.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
++++++.||++|+ +.+..++++ +|+|||+||..... .++...+++|+.||.+++++|++.+ +++|||+
T Consensus 75 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~ 147 (346)
T 4egb_A 75 PNYYFVKGEIQNG------ELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQV 147 (346)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEe
Confidence 5899999999987 455666665 99999999987654 3455678999999999999999986 8999999
Q ss_pred eCCccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.+++|.. .+++|+. |..|.+.|+.+|+.+|+++..+
T Consensus 148 SS~~vy~~~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 188 (346)
T 4egb_A 148 STDEVYGSLGKTGRFTEET---PLAPNSPYSSSKASADMIALAY 188 (346)
T ss_dssp EEGGGGCCCCSSCCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred CchHHhCCCCcCCCcCCCC---CCCCCChhHHHHHHHHHHHHHH
Confidence 999888763 4678854 5556667889999999988764
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.2e-13 Score=137.75 Aligned_cols=115 Identities=23% Similarity=0.292 Sum_probs=93.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.||+++++++++.+++..+.+++|+|||+||..++ .++.+.+++|+.||.+++++|++.+ +++|||+||.+
T Consensus 139 ~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~ 216 (478)
T 4dqv_A 139 ADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTAD 216 (478)
T ss_dssp TTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGG
T ss_pred cCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehh
Confidence 368999999999999999999999999999999999999887 5555668999999999999999976 89999999998
Q ss_pred cccC--CCcccccccCCCCCH--------HHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCD--REEVREIIYSPPYDP--------QKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~--~~~~~E~~~~~p~~p--------~~~y~~~K~~~E~~~~~~ 420 (422)
+++. ..+++|+....|.+| .+.|+.+|+++|.++..+
T Consensus 217 v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 263 (478)
T 4dqv_A 217 VGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREA 263 (478)
T ss_dssp GGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHH
T ss_pred hcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHH
Confidence 8775 335666433222222 245999999999998865
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.9e-12 Score=124.81 Aligned_cols=103 Identities=19% Similarity=0.095 Sum_probs=85.8
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
+++++.+|++ + +++.++++++|+|||+||..+.. ++.+.+++|+.||.+++++|++.+ +++|||+||.+++
T Consensus 43 ~~~~~~~Dl~-~------~~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vy 113 (311)
T 3m2p_A 43 DYEYRVSDYT-L------EDLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAY 113 (311)
T ss_dssp CCEEEECCCC-H------HHHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGC
T ss_pred ceEEEEcccc-H------HHHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHh
Confidence 7889999998 6 46678888999999999987765 455568899999999999999987 8999999999888
Q ss_pred cCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 386 CDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 386 g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.. .+++|+. |..|.+.|+.+|+.+|+++..+
T Consensus 114 g~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 147 (311)
T 3m2p_A 114 SDETSLPWNEKE---LPLPDLMYGVSKLACEHIGNIY 147 (311)
T ss_dssp CCGGGCSBCTTS---CCCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHH
Confidence 763 4678854 4555667889999999998764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.5e-12 Score=124.92 Aligned_cols=106 Identities=21% Similarity=0.169 Sum_probs=86.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-hcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-KQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++++.+|++|+ ++++.+ ..++|+|||+||..+.. .+++..+++|+.||.+++++|++.+ ++ |||+||+
T Consensus 68 ~~~~~~~~Dl~d~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~ 139 (362)
T 3sxp_A 68 FKGEVIAADINNP------LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSA 139 (362)
T ss_dssp CCSEEEECCTTCH------HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEG
T ss_pred cCceEEECCCCCH------HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcH
Confidence 4678999999987 355666 77999999999977643 5677789999999999999999976 66 9999999
Q ss_pred ccccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 383 YCNCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 383 ~~~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+++|.. .+++|+. |.+|.+.|+.+|+.+|+++..+.
T Consensus 140 ~vyg~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~~ 176 (362)
T 3sxp_A 140 GVYGNTKAPNVVGK---NESPENVYGFSKLCMDEFVLSHS 176 (362)
T ss_dssp GGGCSCCSSBCTTS---CCCCSSHHHHHHHHHHHHHHHTT
T ss_pred HHhCCCCCCCCCCC---CCCCCChhHHHHHHHHHHHHHHh
Confidence 888763 3677854 55566678899999999988764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=5.1e-12 Score=123.05 Aligned_cols=106 Identities=19% Similarity=0.232 Sum_probs=85.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|++|+ +++..++.++|+|||+||..... .++++.+++|+.||.+++++|++.+ +++|||+||
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS 127 (337)
T 1r6d_A 55 PRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVST 127 (337)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecc
Confidence 5789999999986 45677778999999999987643 3445678999999999999999986 899999999
Q ss_pred CccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|.. .+++|+. |..|.+.|+.+|+..|+++..+
T Consensus 128 ~~vyg~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 165 (337)
T 1r6d_A 128 NQVYGSIDSGSWTESS---PLEPNSPYAASKAGSDLVARAY 165 (337)
T ss_dssp GGGGCCCSSSCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred hHHhCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHH
Confidence 9888753 4677754 4445567889999999988754
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=4.6e-12 Score=123.87 Aligned_cols=106 Identities=17% Similarity=0.201 Sum_probs=87.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhh-hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE-ALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+++++.+|++|+ +++..+++++|+|||+||...... .....+++|+.||.+++++|++.+ +++|||+||.+
T Consensus 56 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~ 128 (347)
T 4id9_A 56 TGGEEVVGSLEDG------QALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGE 128 (347)
T ss_dssp SCCSEEESCTTCH------HHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG
T ss_pred CCccEEecCcCCH------HHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHH
Confidence 5788999999987 456778889999999999877543 346779999999999999999976 89999999998
Q ss_pred cccC----CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCD----REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~----~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||. ..+++|+. |..|.+.|+.+|+.+|+++..+
T Consensus 129 vyg~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 129 VYPENRPEFLPVTEDH---PLCPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp GTTTTSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCcCCCC---CCCCCChHHHHHHHHHHHHHHH
Confidence 8875 23577754 4555667889999999998754
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=7.4e-12 Score=118.35 Aligned_cols=106 Identities=11% Similarity=0.151 Sum_probs=86.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
..+++++.+|++|+ +++..+++++|+|||+||... ..++++.+++|+.||.+++++|++.+ ++++||+||..
T Consensus 42 ~~~~~~~~~Dl~d~------~~~~~~~~~~D~vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~ 113 (267)
T 3rft_A 42 GPNEECVQCDLADA------NAVNAMVAGCDGIVHLGGISV-EKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNH 113 (267)
T ss_dssp CTTEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGG
T ss_pred CCCCEEEEcCCCCH------HHHHHHHcCCCEEEECCCCcC-cCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchH
Confidence 46789999999986 467888889999999999853 45677789999999999999999976 89999999987
Q ss_pred cccC---CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCD---REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~---~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|. ..+++|+. |..|...|+.+|+..|.+++.+
T Consensus 114 ~~g~~~~~~~~~e~~---~~~~~~~Y~~sK~~~e~~~~~~ 150 (267)
T 3rft_A 114 TIGYYPQTERLGPDV---PARPDGLYGVSKCFGENLARMY 150 (267)
T ss_dssp GGTTSBTTSCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCCCCC---CCCCCChHHHHHHHHHHHHHHH
Confidence 7754 34577744 5556667889999999888654
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.27 E-value=7.5e-12 Score=121.66 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=86.7
Q ss_pred CcEEEE-eCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPI-LGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v-~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+++++ .+|++|++. ++.+++++|+|||+||......++.+.+++|+.||.+++++|++..++++|||+||.+
T Consensus 61 ~~~~~~~~~D~~d~~~------~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 61 GRFETAVVEDMLKQGA------YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TTEEEEECSCTTSTTT------TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CceEEEEecCCcChHH------HHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 568888 899999753 2455678999999999877656677789999999999999998533489999999987
Q ss_pred cccCC------Cccccccc-------------CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR------EEVREIIY-------------SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~------~~~~E~~~-------------~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.. .+++|+.. ..|..|.+.|+.+|..+|.++..+
T Consensus 135 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 190 (342)
T 1y1p_A 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190 (342)
T ss_dssp GTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 76432 45677542 124578899999999999998765
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=121.87 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=86.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|++|+ +++..+++++|+|||+||..... .++...+++|+.||.+++++|++.+ +++|||+||
T Consensus 81 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS 153 (352)
T 1sb8_A 81 SNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAAS 153 (352)
T ss_dssp TTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecc
Confidence 5789999999986 45677888999999999987643 3456678999999999999999976 899999999
Q ss_pred CccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++++.. .+++|+.+ ..|.+.|+.+|...|+++..+
T Consensus 154 ~~~~~~~~~~~~~E~~~---~~~~~~Y~~sK~~~e~~~~~~ 191 (352)
T 1sb8_A 154 SSTYGDHPGLPKVEDTI---GKPLSPYAVTKYVNELYADVF 191 (352)
T ss_dssp GGGGTTCCCSSBCTTCC---CCCCSHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCCC---CCCCChhHHHHHHHHHHHHHH
Confidence 9888763 36777544 445567888999999988654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-12 Score=121.93 Aligned_cols=108 Identities=14% Similarity=0.035 Sum_probs=82.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.++++.+|++|+ +.+..++++ +|+|||+||..+. ..++.+.+++|+.||.+++++|++.+ +++|||+
T Consensus 39 ~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~ 111 (319)
T 4b8w_A 39 FVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSC 111 (319)
T ss_dssp ECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEE
T ss_pred ccCceecccCCH------HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEE
Confidence 344557899886 355666665 9999999998752 24556779999999999999999987 8999999
Q ss_pred eCCccccCC--CcccccccC-CCCCHHH-HHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDR--EEVREIIYS-PPYDPQK-IIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~--~~~~E~~~~-~p~~p~~-~y~~~K~~~E~~~~~~ 420 (422)
||.++||.. .+++|+... .|..|.. .|+.+|+++|+++..+
T Consensus 112 SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 156 (319)
T 4b8w_A 112 LSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAY 156 (319)
T ss_dssp CCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHH
Confidence 999888763 478887632 2344433 5999999999988764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=7.7e-12 Score=122.20 Aligned_cols=105 Identities=22% Similarity=0.307 Sum_probs=84.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
++++++.+|++|+ +++..+++++|+|||+||..... .+++..+++|+.||.+++++|++.+ + +|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS 125 (348)
T 1oc2_A 54 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVST 125 (348)
T ss_dssp SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEE
T ss_pred CCeEEEECCCCCH------HHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecc
Confidence 5789999999986 45678888999999999987643 3445678999999999999999986 6 9999999
Q ss_pred CccccCC--------------CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--------------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--------------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|.. .+++|+. |..|.+.|+.+|+..|+++..+
T Consensus 126 ~~vyg~~~~~~~~~~~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 175 (348)
T 1oc2_A 126 DEVYGDLPLREDLPGHGEGPGEKFTAET---NYNPSSPYSSTKAASDLIVKAW 175 (348)
T ss_dssp GGGGCCBCCGGGSTTTTCSTTSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceeCCCcccccccccccccCCCcCCCC---CCCCCCccHHHHHHHHHHHHHH
Confidence 9887653 4566754 4455567889999999988764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-11 Score=120.44 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=84.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
+++++.+|++|+ +.++.+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++|||+|
T Consensus 45 ~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~S 117 (330)
T 2c20_A 45 GAKFYNGDLRDK------AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSS 117 (330)
T ss_dssp TSEEEECCTTCH------HHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CcEEEECCCCCH------HHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeC
Confidence 688999999986 35566666 899999999987643 3456678999999999999999976 89999999
Q ss_pred CCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.+++|.. .+++|+. |..|.+.|+.+|..+|+++..+
T Consensus 118 s~~~~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 156 (330)
T 2c20_A 118 TAATYGEVDVDLITEET---MTNPTNTYGETKLAIEKMLHWY 156 (330)
T ss_dssp CGGGGCSCSSSSBCTTS---CCCCSSHHHHHHHHHHHHHHHH
T ss_pred CceeeCCCCCCCCCcCC---CCCCCChHHHHHHHHHHHHHHH
Confidence 99888753 4678854 4455667889999999988764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.6e-12 Score=120.48 Aligned_cols=106 Identities=15% Similarity=0.117 Sum_probs=83.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
+++++.+|++|+ +++..++++ +|+|||+||..... .++...+++|+.||.+++++|++.+++++|||+|
T Consensus 52 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 125 (321)
T 2pk3_A 52 NVEMISLDIMDS------QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 125 (321)
T ss_dssp TEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred eeeEEECCCCCH------HHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 688999999986 345666654 89999999987643 2566789999999999999998763479999999
Q ss_pred CCccccC----CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCD----REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~----~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.+++|. ..+++|+. |..|.+.|+.+|...|+++..+
T Consensus 126 S~~v~g~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~E~~~~~~ 166 (321)
T 2pk3_A 126 SSEEYGMILPEESPVSEEN---QLRPMSPYGVSKASVGMLARQY 166 (321)
T ss_dssp EGGGTBSCCGGGCSBCTTS---CCBCCSHHHHHHHHHHHHHHHH
T ss_pred cHHhcCCCCCCCCCCCCCC---CCCCCCccHHHHHHHHHHHHHH
Confidence 9988874 34677754 4445567888999999988765
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=120.37 Aligned_cols=107 Identities=23% Similarity=0.210 Sum_probs=84.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|++|+ ++++.++.++|+|||+||..... .++++.+++|+.||.+++++|++.+..++|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 54 PRYTFVKGDVADY------ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 5789999999986 45667778999999999987643 34456789999999999999998753379999999
Q ss_pred CccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|. ..+++|+. |..|.+.|+.+|...|+++..+
T Consensus 128 ~~vyg~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 165 (336)
T 2hun_A 128 DEVYGDILKGSFTEND---RLMPSSPYSATKAASDMLVLGW 165 (336)
T ss_dssp GGGGCCCSSSCBCTTB---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCcCCCC---CCCCCCccHHHHHHHHHHHHHH
Confidence 988875 34677754 3445567888999999988764
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.4e-12 Score=123.28 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=87.8
Q ss_pred CcEEEEeCcCC-CCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDIT-EPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~-~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
++++++.||++ |+ +.+..+++++|+|||+||..... .++.+.+++|+.||.+++++|++.+ ++|||+|
T Consensus 69 ~~v~~~~~Dl~~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~S 140 (372)
T 3slg_A 69 ERMHFFEGDITINK------EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPS 140 (372)
T ss_dssp TTEEEEECCTTTCH------HHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEEC
T ss_pred CCeEEEeCccCCCH------HHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeC
Confidence 68999999999 65 45677778999999999988754 3456678999999999999999976 8999999
Q ss_pred CCccccCC--CcccccccC---CCC-CHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYS---PPY-DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~---~p~-~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.++||.. .++.|+..+ .|. .|.+.|+.+|+.+|+++..+
T Consensus 141 S~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~ 186 (372)
T 3slg_A 141 TSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGY 186 (372)
T ss_dssp CGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 99888763 456665533 233 57889999999999998875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.7e-11 Score=118.09 Aligned_cols=106 Identities=18% Similarity=0.193 Sum_probs=85.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
.++++++.+|+++.. +.++++++|+|||+||..... .+++..+++|+.||.+++++|++.+ +++|||+|
T Consensus 42 ~~~~~~~~~Dl~~~~-------~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~S 113 (313)
T 3ehe_A 42 NEAARLVKADLAADD-------IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTS 113 (313)
T ss_dssp CTTEEEECCCTTTSC-------CHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred CCCcEEEECcCChHH-------HHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeC
Confidence 467899999999833 256778999999999975432 4567789999999999999999987 89999999
Q ss_pred CCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|..+||.. .+.+|+. |..|.+.|+.+|...|.++..+
T Consensus 114 S~~vyg~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 152 (313)
T 3ehe_A 114 TSTVYGEAKVIPTPEDY---PTHPISLYGASKLACEALIESY 152 (313)
T ss_dssp CGGGGCSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred chHHhCcCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHH
Confidence 99888753 4677754 5555667889999999988764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=119.84 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=85.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|++|+ ++++.+++ ++|+|||+||..... ....+.+++|+.||.+++++|++.+ +++|||+
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~ 127 (341)
T 3enk_A 55 KTPAFHETDVSDE------RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFS 127 (341)
T ss_dssp CCCEEECCCTTCH------HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCceEEEeecCCH------HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 4688999999987 45566666 899999999987644 3344678999999999999999976 8999999
Q ss_pred eCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||..++|. ..+++|+. |..|.+.|+.+|++.|+++..+
T Consensus 128 SS~~~~g~~~~~~~~e~~---~~~~~~~Y~~sK~~~e~~~~~~ 167 (341)
T 3enk_A 128 SSATVYGVPERSPIDETF---PLSATNPYGQTKLMAEQILRDV 167 (341)
T ss_dssp EEGGGBCSCSSSSBCTTS---CCBCSSHHHHHHHHHHHHHHHH
T ss_pred ecceEecCCCCCCCCCCC---CCCCCChhHHHHHHHHHHHHHH
Confidence 99988875 34677854 4456667889999999988764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-11 Score=119.25 Aligned_cols=105 Identities=19% Similarity=0.228 Sum_probs=82.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh--hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD--EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
+++++.+|++|+ +++..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++|||+||
T Consensus 40 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS 112 (317)
T 3ajr_A 40 GIKFITLDVSNR------DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPST 112 (317)
T ss_dssp TCCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred CceEEEecCCCH------HHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecC
Confidence 567899999986 35566666 899999999976432 3456678999999999999999976 899999999
Q ss_pred CccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++++.. .+.+|+ .|.+|.+.|+.+|..+|++++.+
T Consensus 113 ~~~~~~~~~~~~~~e~---~~~~p~~~Y~~sK~~~e~~~~~~ 151 (317)
T 3ajr_A 113 IGVFGPETPKNKVPSI---TITRPRTMFGVTKIAAELLGQYY 151 (317)
T ss_dssp GGGCCTTSCSSSBCSS---SCCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcccc---ccCCCCchHHHHHHHHHHHHHHH
Confidence 9888753 245564 34556667889999999988654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-11 Score=120.85 Aligned_cols=106 Identities=22% Similarity=0.251 Sum_probs=84.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhc--CCCc---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEM--THLE--- 374 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~--- 374 (422)
.+++++.+|++|+ +++..+++ ++|+|||+||..... .++++.+++|+.||.+++++|++. + ++
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~ 122 (361)
T 1kew_A 50 NRYNFEHADICDS------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDK 122 (361)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHH
T ss_pred CCeEEEECCCCCH------HHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-ccccc
Confidence 4789999999986 35566666 899999999987643 345567899999999999999987 6 76
Q ss_pred ----eEEEEeCCccccCCC------------cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ----ALIHVSTAYCNCDRE------------EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 ----r~v~~SS~~~~g~~~------------~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|||+||.+++|... +++|+. |..|.+.|+.+|...|.++..+
T Consensus 123 ~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 181 (361)
T 1kew_A 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT---AYAPSSPYSASKASSDHLVRAW 181 (361)
T ss_dssp HHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC---CCCCCCccHHHHHHHHHHHHHH
Confidence 999999998887542 566753 4455668889999999988764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=122.96 Aligned_cols=110 Identities=13% Similarity=0.070 Sum_probs=81.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEM-THLEALIHV 379 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~ 379 (422)
.++++++.+|++|+ +++..+++++|+|||+||..... .++.+.+++|+.||.+++++|++. + +++|||+
T Consensus 77 ~~~v~~~~~Dl~d~------~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~ 149 (377)
T 2q1s_A 77 HPAVRFSETSITDD------ALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYS 149 (377)
T ss_dssp CTTEEEECSCTTCH------HHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEE
T ss_pred CCceEEEECCCCCH------HHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEe
Confidence 35789999999986 45677778999999999987653 355677899999999999999997 5 8999999
Q ss_pred eCCccccCC--Cccc--ccccCCCC-CHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDR--EEVR--EIIYSPPY-DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~--~~~~--E~~~~~p~-~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.+++|.. .+++ |+....|. .|...|+.+|+..|+++..+
T Consensus 150 SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 195 (377)
T 2q1s_A 150 AAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYY 195 (377)
T ss_dssp EEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred CCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHH
Confidence 999888753 2566 75422244 56677899999999988764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.23 E-value=8.2e-12 Score=120.02 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=82.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh--hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD--EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
+++++.+|++|+ +++..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++|||+||
T Consensus 46 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS 118 (312)
T 2yy7_A 46 SGPFEVVNALDF------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSS 118 (312)
T ss_dssp SSCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEE
T ss_pred CCceEEecCCCH------HHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecc
Confidence 467899999986 45566666 899999999976532 4566779999999999999999976 899999999
Q ss_pred CccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++++.. .+.+|+. |..|.+.|+.+|...|++++.+
T Consensus 119 ~~~~~~~~~~~~~~e~~---~~~~~~~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 119 IAVFGPTTPKENTPQYT---IMEPSTVYGISKQAGERWCEYY 157 (312)
T ss_dssp GGGCCTTSCSSSBCSSC---BCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCccccC---cCCCCchhHHHHHHHHHHHHHH
Confidence 9888763 3566654 4445567888999999988754
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-11 Score=121.61 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=83.2
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc--C-ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ--N-VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~--~-~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
++++.+|++|+ +.+..+++ + +|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++|||+|
T Consensus 71 ~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEE
T ss_pred EEEEECCCCCH------HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEEC
Confidence 88999999987 34556665 6 99999999987653 3556779999999999999999876 89999999
Q ss_pred CCccccCC---------CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR---------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~---------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.+++|.. .+++|+. |..|...|+.+|+..|+++..+
T Consensus 144 S~~v~g~~~~~~~~~~~~~~~E~~---~~~p~~~Y~~sK~~~e~~~~~~ 189 (397)
T 1gy8_A 144 SAAIFGNPTMGSVSTNAEPIDINA---KKSPESPYGESKLIAERMIRDC 189 (397)
T ss_dssp EGGGTBSCCC-----CCCCBCTTS---CCBCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHhCCCCcccccccccCcCccC---CCCCCCchHHHHHHHHHHHHHH
Confidence 99887642 3577754 4455668889999999988764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.3e-11 Score=120.25 Aligned_cols=105 Identities=13% Similarity=0.127 Sum_probs=77.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
+++++.+|++|+ +++..+++++|+|||+||..+.. .+..+.+++|+.||.+++++|++.+ +++|||+||.++
T Consensus 57 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~ 129 (342)
T 2x4g_A 57 EPECRVAEMLDH------AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYA 129 (342)
T ss_dssp CCEEEECCTTCH------HHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGG
T ss_pred CeEEEEecCCCH------HHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHh
Confidence 688999999986 45678888999999999976532 3455678999999999999999986 899999999988
Q ss_pred ccCCC---cccccccCCCCCH----HHHHHHHhhCCHHHhhhc
Q psy16526 385 NCDRE---EVREIIYSPPYDP----QKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~~~---~~~E~~~~~p~~p----~~~y~~~K~~~E~~~~~~ 420 (422)
++... ..+|+. |..| .+.|+.+|+..|+++..+
T Consensus 130 ~~~~~~~~~~~E~~---~~~p~~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 130 MPRHPQGLPGHEGL---FYDSLPSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp SCCCTTSSCBCTTC---CCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred hCcCCCCCCCCCCC---CCCccccccChHHHHHHHHHHHHHHH
Confidence 87532 236654 4445 668889999999998764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.3e-11 Score=118.76 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=84.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|++|+ +++..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++|||+
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~ 130 (348)
T 1ek6_A 58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFS 130 (348)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEE
Confidence 4678999999986 34566666 899999999987643 3456678999999999999999876 8999999
Q ss_pred eCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.+++|. ..+++|+.+..| ..+.|+.+|+..|+++..+
T Consensus 131 SS~~~~g~~~~~~~~E~~~~~p--~~~~Y~~sK~~~e~~~~~~ 171 (348)
T 1ek6_A 131 SSATVYGNPQYLPLDEAHPTGG--CTNPYGKSKFFIEEMIRDL 171 (348)
T ss_dssp EEGGGGCSCSSSSBCTTSCCCC--CSSHHHHHHHHHHHHHHHH
T ss_pred CcHHHhCCCCCCCcCCCCCCCC--CCCchHHHHHHHHHHHHHH
Confidence 99988875 346788644333 1567889999999988764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-11 Score=119.03 Aligned_cols=106 Identities=24% Similarity=0.228 Sum_probs=83.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCc-eEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLE-ALIH 378 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-r~v~ 378 (422)
.+++++.+|++|+ ++++.++++ +|+|||+||..... .+++..+++|+.||.+++++|++.+ ++ +|||
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~ 122 (347)
T 1orr_A 50 GNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIY 122 (347)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEE
Confidence 3588999999986 456667766 99999999987643 3556678999999999999999976 65 9999
Q ss_pred EeCCccccCCC--c----------------ccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDRE--E----------------VREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~~--~----------------~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||.+++|... + ++| ..|..|.+.|+.+|+..|+++..+
T Consensus 123 ~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e---~~~~~~~~~Y~~sK~~~E~~~~~~ 179 (347)
T 1orr_A 123 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE---STQLDFHSPYGCSKGAADQYMLDY 179 (347)
T ss_dssp EEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT---TSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eccHHHhCCCCcCCcccccccccccccccCccc---cCCCCCCCchHHHHHHHHHHHHHH
Confidence 99998887521 2 333 235567788999999999998764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=118.37 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=83.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
..+++++.+|++|++ . ..++++ |+|||+||..... .++...+++|+.||.+++++|++.+ +++|||+|
T Consensus 42 ~~~~~~~~~Dl~d~~-~------~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~S 112 (312)
T 3ko8_A 42 NPSAELHVRDLKDYS-W------GAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFAS 112 (312)
T ss_dssp CTTSEEECCCTTSTT-T------TTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEE
T ss_pred CCCceEEECccccHH-H------HhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeC
Confidence 457899999999986 2 344455 9999999965422 4566778999999999999999987 89999999
Q ss_pred CCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.+++|.. .+++|+. |..|.+.|+.+|..+|+++..+
T Consensus 113 S~~vyg~~~~~~~~e~~---~~~p~~~Y~~sK~~~e~~~~~~ 151 (312)
T 3ko8_A 113 SSTVYGDADVIPTPEEE---PYKPISVYGAAKAAGEVMCATY 151 (312)
T ss_dssp EGGGGCSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCCCC---CCCCCChHHHHHHHHHHHHHHH
Confidence 99888763 4677854 4555667889999999988764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.1e-11 Score=118.85 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=84.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-cCccEEEEcccccCh--hhhHHHHHHhhHHHHHHHHHHHHhcC----CCceE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-QNVSVVFHSAATVKF--DEALKLSVTINMLGTKRLVELCHEMT----HLEAL 376 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-~~~d~ViH~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~----~~~r~ 376 (422)
..+++++.+|++|++ +++.++ .++|+|||+||.... ..++.+.+++|+.||.+++++|++.+ ++++|
T Consensus 63 ~~~~~~~~~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i 136 (342)
T 2hrz_A 63 SGAVDARAADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV 136 (342)
T ss_dssp CSEEEEEECCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CCceeEEEcCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence 357889999999974 445666 489999999997652 23566778999999999999998864 37899
Q ss_pred EEEeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+||.++++.. .+++|+. |.+|...|+.+|...|+++..+
T Consensus 137 v~~SS~~~~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 179 (342)
T 2hrz_A 137 VFTSSIAVFGAPLPYPIPDEF---HTTPLTSYGTQKAICELLLSDY 179 (342)
T ss_dssp EEEEEGGGCCSSCCSSBCTTC---CCCCSSHHHHHHHHHHHHHHHH
T ss_pred EEeCchHhhCCCCCCCcCCCC---CCCCcchHHHHHHHHHHHHHHH
Confidence 999999888753 4678854 4445567888999999988764
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.3e-11 Score=114.60 Aligned_cols=105 Identities=11% Similarity=0.185 Sum_probs=84.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+||... ..+....+++|+.|+.+++++|++.+ +++|||+||..+
T Consensus 42 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~ 113 (267)
T 3ay3_A 42 AHEEIVACDLADA------QAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHT 113 (267)
T ss_dssp TTEEECCCCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGG
T ss_pred CCccEEEccCCCH------HHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHH
Confidence 4678999999986 456778889999999999763 34566778999999999999999876 899999999988
Q ss_pred ccC---CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCD---REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~---~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++. ..+++|+. |..|...|+.+|...|.++..+
T Consensus 114 ~~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 149 (267)
T 3ay3_A 114 IGYYPRTTRIDTEV---PRRPDSLYGLSKCFGEDLASLY 149 (267)
T ss_dssp STTSBTTSCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCCCCCC---CCCCCChHHHHHHHHHHHHHHH
Confidence 764 24678854 4455567888999999887654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-11 Score=118.96 Aligned_cols=106 Identities=15% Similarity=0.115 Sum_probs=83.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCC-ceEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHL-EALIH 378 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~r~v~ 378 (422)
++++++.+|++|+ +++..+++ ++|+|||+||..... .++...+++|+.||.+++++|++.+ + ++|||
T Consensus 63 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~ 135 (335)
T 1rpn_A 63 GDIQYEDGDMADA------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQ 135 (335)
T ss_dssp GGEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEE
Confidence 4789999999986 34566665 469999999987643 3566778999999999999999876 5 89999
Q ss_pred EeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||.+++|.. .+++|+. |..|.+.|+.+|+..|.++..+
T Consensus 136 ~SS~~v~g~~~~~~~~E~~---~~~p~~~Y~~sK~~~e~~~~~~ 176 (335)
T 1rpn_A 136 ASTSEMFGLIQAERQDENT---PFYPRSPYGVAKLYGHWITVNY 176 (335)
T ss_dssp EEEGGGGCSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred EeCHHHhCCCCCCCCCccc---CCCCCChhHHHHHHHHHHHHHH
Confidence 9999888763 3677854 4445567889999999988764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.20 E-value=5.3e-11 Score=115.88 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=85.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
++++++.||++|+. +.++.+++++|+|||+||..... .++.+.+++|+.||.+++++|++.+ ++|||+||
T Consensus 45 ~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS 117 (345)
T 2bll_A 45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPST 117 (345)
T ss_dssp TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECC
T ss_pred CCeEEEeccccCcH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence 57899999999853 34566677899999999987642 3556678999999999999999875 79999999
Q ss_pred CccccCC--CcccccccC---CCC-CHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYS---PPY-DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~---~p~-~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|.. .+++|+... .|. .|.+.|+.+|+.+|+++..+
T Consensus 118 ~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 162 (345)
T 2bll_A 118 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162 (345)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHH
Confidence 9888753 356776543 232 57789999999999998654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-12 Score=119.87 Aligned_cols=101 Identities=13% Similarity=0.104 Sum_probs=76.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcC-ccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQN-VSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~-~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.++++++.+|++|++. +..++++ +|+|||+||... .+....+++|+.||.+++++|++.+ +++|||+||.
T Consensus 40 ~~~~~~~~~Dl~d~~~------~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~ 110 (286)
T 3gpi_A 40 PAGVQTLIADVTRPDT------LASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSST 110 (286)
T ss_dssp CTTCCEEECCTTCGGG------CTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEG
T ss_pred ccCCceEEccCCChHH------HHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEccc
Confidence 4678999999999752 2445555 999999999742 4456678999999999999999876 8999999999
Q ss_pred ccccCC--CcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 383 YCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 383 ~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
++||.. .+++|+. |..|.+.|+.+|+.+|++
T Consensus 111 ~vyg~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~ 143 (286)
T 3gpi_A 111 GVYGQEVEEWLDEDT---PPIAKDFSGKRMLEAEAL 143 (286)
T ss_dssp GGCCCCCSSEECTTS---CCCCCSHHHHHHHHHHHH
T ss_pred EEEcCCCCCCCCCCC---CCCCCChhhHHHHHHHHH
Confidence 888763 4678854 445556788899999987
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.1e-11 Score=119.75 Aligned_cols=107 Identities=18% Similarity=0.237 Sum_probs=83.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
++++++.+|++|+ +++..++++ +|+|||+||..... .++.+.+++|+.||.+++++|++.+++++|||+
T Consensus 57 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~ 130 (357)
T 1rkx_A 57 DGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 130 (357)
T ss_dssp TTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CceEEEEccccCH------HHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 4788999999986 345666654 89999999975432 345567899999999999999987557899999
Q ss_pred eCCccccCCC---cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDRE---EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~~---~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.++||... +.+|+. |..|.+.|+.+|+..|+++..+
T Consensus 131 SS~~vyg~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 171 (357)
T 1rkx_A 131 TSDKCYDNKEWIWGYRENE---AMGGYDPYSNSKGCAELVTSSY 171 (357)
T ss_dssp CCGGGBCCCCSSSCBCTTS---CBCCSSHHHHHHHHHHHHHHHH
T ss_pred cCHHHhCCCCcCCCCCCCC---CCCCCCccHHHHHHHHHHHHHH
Confidence 9998887642 566643 4445667889999999988764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-11 Score=120.53 Aligned_cols=108 Identities=15% Similarity=0.067 Sum_probs=85.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
.+++++.+|++|+ +++..+++++|+|||+||.... ..++.+.+++|+.||.+++++|++.+ +++|||+|
T Consensus 72 ~~v~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~S 144 (379)
T 2c5a_A 72 FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYAS 144 (379)
T ss_dssp TCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCceEEECCCCCH------HHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEe
Confidence 4688999999986 4567788899999999998653 34567789999999999999999976 89999999
Q ss_pred CCccccCC-------CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR-------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~-------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.++++.. .+++|+.. .|..|...|+.+|+..|+++..+
T Consensus 145 S~~v~~~~~~~~~~~~~~~E~~~-~~~~~~~~Y~~sK~~~E~~~~~~ 190 (379)
T 2c5a_A 145 SACIYPEFKQLETTNVSLKESDA-WPAEPQDAFGLEKLATEELCKHY 190 (379)
T ss_dssp EGGGSCGGGSSSSSSCEECGGGG-SSBCCSSHHHHHHHHHHHHHHHH
T ss_pred ehheeCCCCCCCccCCCcCcccC-CCCCCCChhHHHHHHHHHHHHHH
Confidence 99887642 24666542 24455668889999999988654
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-11 Score=118.29 Aligned_cols=106 Identities=16% Similarity=0.144 Sum_probs=83.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCC-ceEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHL-EALIH 378 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~r~v~ 378 (422)
.+++++.+|++|+ +++.++++ ++|+|||+||..... .+++..+++|+.||.+++++|++.+ + ++|||
T Consensus 52 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~ 124 (345)
T 2z1m_A 52 NDVKIIHMDLLEF------SNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQ 124 (345)
T ss_dssp TTEEECCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CceeEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEE
Confidence 4689999999986 34556655 469999999987643 3466778999999999999999876 6 89999
Q ss_pred EeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||.++||.. .+++|+. |..|.+.|+.+|+..|.++..+
T Consensus 125 ~SS~~vyg~~~~~~~~e~~---~~~~~~~Y~~sK~~~e~~~~~~ 165 (345)
T 2z1m_A 125 ASTSEMFGKVQEIPQTEKT---PFYPRSPYAVAKLFGHWITVNY 165 (345)
T ss_dssp EEEGGGGCSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred EechhhcCCCCCCCCCccC---CCCCCChhHHHHHHHHHHHHHH
Confidence 9999888763 3567754 4445567888999999888764
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=4.2e-11 Score=113.81 Aligned_cols=100 Identities=24% Similarity=0.314 Sum_probs=79.5
Q ss_pred eCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 311 LGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
.+|++|+ +.+..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ + +|||+||.+++
T Consensus 39 ~~D~~d~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy 110 (287)
T 3sc6_A 39 LLDITNI------SQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVF 110 (287)
T ss_dssp TSCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGS
T ss_pred ccCCCCH------HHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhc
Confidence 4677765 45566666 799999999988754 3567789999999999999999987 5 79999999888
Q ss_pred cCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 386 CDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 386 g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
|.. .+++|+. |.+|.+.|+.+|+..|+++..+.
T Consensus 111 ~~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~~ 145 (287)
T 3sc6_A 111 QGDRPEGYDEFH---NPAPINIYGASKYAGEQFVKELH 145 (287)
T ss_dssp CCCCSSCBCTTS---CCCCCSHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHhC
Confidence 763 5788865 44555678899999999988764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=5.3e-11 Score=115.74 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=81.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh--hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD--EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
.+++++.+|++|+ ++++.+++ ++|+|||+||..... .++. +++|+.||.+++++|++.+ +++|||+|
T Consensus 65 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~S 135 (330)
T 2pzm_A 65 AGLSVIEGSVTDA------GLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAG-VKRLLNFQ 135 (330)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CCceEEEeeCCCH------HHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcC-CCEEEEec
Confidence 5789999999986 45667777 899999999987642 2333 8999999999999999876 89999999
Q ss_pred CCccccCCC----cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDRE----EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~~----~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.++++... +++|+. .|...|+.+|+..|+++..+
T Consensus 136 S~~~~~~~~~~~~~~~E~~-----~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 136 TALCYGRPATVPIPIDSPT-----APFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp EGGGGCSCSSSSBCTTCCC-----CCCSHHHHHHHHHHHHHHTC
T ss_pred CHHHhCCCccCCCCcCCCC-----CCCChHHHHHHHHHHHHHHc
Confidence 998887532 666754 44567889999999988764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=5.2e-11 Score=117.75 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=82.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCC---ceE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHL---EAL 376 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~r~ 376 (422)
.+++++.+|++|+ +++..++++ +|+|||+||..... .++...+++|+.||.+++++|++.+ + ++|
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~i 151 (375)
T 1t2a_A 79 GNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKF 151 (375)
T ss_dssp -CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEE
T ss_pred CCceEEEccCCCH------HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceE
Confidence 4688999999986 345566554 69999999987653 3456678999999999999999876 6 799
Q ss_pred EEEeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+||.++++.. .+++|+. |..|.+.|+.+|+..|.++..+
T Consensus 152 v~~SS~~~~~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 194 (375)
T 1t2a_A 152 YQASTSELYGKVQEIPQKETT---PFYPRSPYGAAKLYAYWIVVNF 194 (375)
T ss_dssp EEEEEGGGTCSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhCCCCCCCCCccC---CCCCCChhHHHHHHHHHHHHHH
Confidence 999999888753 4678854 3445567888999999888754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=5e-11 Score=116.04 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=80.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hh-HHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EA-LKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~-~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
++++++.||++|++. +..+++++|+|||+||..... .+ .++.+++|+.||.+++++|++.+.+++|||+||+
T Consensus 56 ~~~~~~~~Dl~d~~~------~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~ 129 (337)
T 2c29_D 56 THLTLWKADLADEGS------FDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSA 129 (337)
T ss_dssp HHEEEEECCTTSTTT------THHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCG
T ss_pred CeEEEEEcCCCCHHH------HHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeH
Confidence 368899999999753 367778999999999976532 22 3356899999999999999986547999999998
Q ss_pred cc-ccC---CCcccccccCC-----CC-CHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YC-NCD---REEVREIIYSP-----PY-DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~-~g~---~~~~~E~~~~~-----p~-~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ++. ..+++|+...+ +. .|...|+.+|.+.|+++..+
T Consensus 130 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 130 GTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp GGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHH
Confidence 63 332 23456653221 01 14557999999999887654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.2e-11 Score=121.67 Aligned_cols=107 Identities=19% Similarity=0.123 Sum_probs=80.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
..+++++.||++|++.. . ...++|+|||+||..+...++...+++|+.||.+++++|++ + +++|||+||.+
T Consensus 129 ~~~v~~v~~Dl~d~~~l------~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~ 199 (427)
T 4f6c_A 129 LSNIEVIVGDFECMDDV------V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTIS 199 (427)
T ss_dssp HTTEEEEEECC---CCC------C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGG
T ss_pred cCceEEEeCCCCCcccC------C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchH
Confidence 36899999999995432 2 55789999999999877777777899999999999999999 4 79999999998
Q ss_pred cccC-------CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCD-------REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~-------~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ |. ..+++|+....+..|.+.|+.+|+.+|.++..+
T Consensus 200 ~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 242 (427)
T 4f6c_A 200 V-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEA 242 (427)
T ss_dssp G-GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHH
T ss_pred h-CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHH
Confidence 8 54 246777766555668889999999999998764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.4e-11 Score=115.00 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=79.5
Q ss_pred EEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 309 PILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
++.+|++|+ +++.+++++ +|+|||+||..... .++.+.+++|+.||.+++++|++.+ + +|||+||.+
T Consensus 35 ~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~ 106 (299)
T 1n2s_A 35 EFCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDY 106 (299)
T ss_dssp SSCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGG
T ss_pred cccccCCCH------HHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEeccc
Confidence 345788775 355666665 99999999987643 4566779999999999999999976 5 899999998
Q ss_pred cccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 384 CNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 384 ~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
++|.. .+++|+. |.+|.+.|+.+|+.+|+++..+.
T Consensus 107 vy~~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~~ 143 (299)
T 1n2s_A 107 VFPGTGDIPWQETD---ATSPLNVYGKTKLAGEKALQDNC 143 (299)
T ss_dssp GSCCCTTCCBCTTS---CCCCSSHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCCCCCCCC---CCCCccHHHHHHHHHHHHHHHhC
Confidence 88763 3677854 44555678899999999987653
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.1e-10 Score=112.70 Aligned_cols=102 Identities=11% Similarity=0.109 Sum_probs=80.2
Q ss_pred CcCCCCCCCCCHHHHHHHhc--CccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 312 GDITEPELGISQNDQKILKQ--NVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 312 gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
+|++|+ +++..+++ ++|+|||+||..+. ..++.+.+++|+.||.+++++|++.+ +++|||+||.+++
T Consensus 39 ~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vy 111 (321)
T 1e6u_A 39 LNLLDS------RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIY 111 (321)
T ss_dssp CCTTCH------HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGS
T ss_pred CCccCH------HHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHc
Confidence 566654 45667777 89999999998752 24556778999999999999999976 8999999999888
Q ss_pred cC--CCcccccccC-CCCCHH-HHHHHHhhCCHHHhhhc
Q psy16526 386 CD--REEVREIIYS-PPYDPQ-KIIETMEWMDDSLVNTL 420 (422)
Q Consensus 386 g~--~~~~~E~~~~-~p~~p~-~~y~~~K~~~E~~~~~~ 420 (422)
|. ..+++|+... .|..|. +.|+.+|+.+|+++..+
T Consensus 112 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 150 (321)
T 1e6u_A 112 PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESY 150 (321)
T ss_dssp CTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 75 3467776532 255664 68999999999998764
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=124.53 Aligned_cols=107 Identities=19% Similarity=0.123 Sum_probs=80.9
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.||+++++.. . +..++|+|||+||.+++..++.+..++|+.||.+++++|++ + +++|||+||.+
T Consensus 210 ~~~v~~v~~Dl~d~~~l------~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~ 280 (508)
T 4f6l_B 210 LSNIEVIVGDFECMDDV------V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTIS 280 (508)
T ss_dssp STTEEEEEEBTTBCSSC------C-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESC
T ss_pred cCceEEEecCCcccccC------C-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChh
Confidence 46899999999995421 1 55789999999999887777777789999999999999998 4 79999999998
Q ss_pred cccC-------CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCD-------REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~-------~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ |. ..+++|+....+..|.+.|+.+|+.+|+++..+
T Consensus 281 v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 323 (508)
T 4f6l_B 281 V-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEA 323 (508)
T ss_dssp T-TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHH
T ss_pred h-ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHH
Confidence 8 43 235777665444567889999999999998764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=6.5e-11 Score=118.01 Aligned_cols=109 Identities=14% Similarity=0.032 Sum_probs=82.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChhh---hH---HHHHHhhHHHHHHHHHHHHhcCCC-ce
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFDE---AL---KLSVTINMLGTKRLVELCHEMTHL-EA 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~~---~~---~~~~~~Nv~gt~~ll~~a~~~~~~-~r 375 (422)
.+++++.||++|+ +++..++++ +|+|||+||..+... ++ ...+++|+.||.+++++|++.+ + ++
T Consensus 77 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~ 149 (404)
T 1i24_A 77 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECH 149 (404)
T ss_dssp CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred CceEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcE
Confidence 5688999999986 355666666 999999999876432 22 2367899999999999999876 5 69
Q ss_pred EEEEeCCccccCC-Cccccccc-----------CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDR-EEVREIIY-----------SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~-~~~~E~~~-----------~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|||+||.+++|.. .+++|+.. +.|..|.+.|+.+|+.+|+++..+
T Consensus 150 ~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 206 (404)
T 1i24_A 150 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 206 (404)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHH
Confidence 9999999888753 34555311 135566778899999999987654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=7.2e-11 Score=112.46 Aligned_cols=100 Identities=24% Similarity=0.284 Sum_probs=78.5
Q ss_pred eCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 311 LGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
.+|++|+ +++..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ + +|||+||.+++
T Consensus 46 ~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~ 117 (292)
T 1vl0_A 46 DLDITNV------LAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVF 117 (292)
T ss_dssp TCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGS
T ss_pred cCCCCCH------HHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeE
Confidence 3677665 45566666 799999999987643 4556779999999999999999987 6 99999999888
Q ss_pred cCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 386 CDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 386 g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
+.. .+++|+.+ ..|.+.|+.+|+..|+++..+.
T Consensus 118 ~~~~~~~~~E~~~---~~~~~~Y~~sK~~~E~~~~~~~ 152 (292)
T 1vl0_A 118 DGEAKEPITEFDE---VNPQSAYGKTKLEGENFVKALN 152 (292)
T ss_dssp CSCCSSCBCTTSC---CCCCSHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCC---CCCccHHHHHHHHHHHHHHhhC
Confidence 763 46788654 4455678899999999987653
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.3e-11 Score=109.12 Aligned_cols=103 Identities=9% Similarity=-0.014 Sum_probs=79.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.+|++|+ +++..+++++|+|||+|+... +..+.+++|+.|+.+++++|++.+ +++|||+||..+
T Consensus 46 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~---~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~ 115 (227)
T 3dhn_A 46 EHLKVKKADVSSL------DEVCEVCKGADAVISAFNPGW---NNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGS 115 (227)
T ss_dssp TTEEEECCCTTCH------HHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTT
T ss_pred CceEEEEecCCCH------HHHHHHhcCCCEEEEeCcCCC---CChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhh
Confidence 6899999999986 467888899999999998652 122368899999999999999987 899999999866
Q ss_pred ccC-CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCD-REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~-~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++. .....| ..|..|.+.|+.+|+..|.+++.+
T Consensus 116 ~~~~~~~~~~---~~~~~p~~~Y~~sK~~~e~~~~~~ 149 (227)
T 3dhn_A 116 LFIAPGLRLM---DSGEVPENILPGVKALGEFYLNFL 149 (227)
T ss_dssp SEEETTEEGG---GTTCSCGGGHHHHHHHHHHHHHTG
T ss_pred ccCCCCCccc---cCCcchHHHHHHHHHHHHHHHHHH
Confidence 543 223334 245567778999999999777665
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=6e-11 Score=114.15 Aligned_cols=106 Identities=20% Similarity=0.236 Sum_probs=82.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|++|+ ++++.+++ ++|+|||+||..... .++...+++|+.||.+++++|++.+ +++|||+
T Consensus 43 ~~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~ 115 (311)
T 2p5y_A 43 KGVPFFRVDLRDK------EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFA 115 (311)
T ss_dssp TTCCEECCCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEE
T ss_pred cCeEEEECCCCCH------HHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEe
Confidence 4677899999986 34556665 899999999987643 3455678999999999999999876 8999999
Q ss_pred eCC-ccccC---CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STA-YCNCD---REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~-~~~g~---~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||. +++|. ..+.+|+. |..|...|+.+|...|+++..+
T Consensus 116 SS~~~~~g~~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 157 (311)
T 2p5y_A 116 STGGAIYGEVPEGERAEETW---PPRPKSPYAASKAAFEHYLSVY 157 (311)
T ss_dssp EEHHHHHCCCCTTCCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCChhhcCCCCCCCCcCCCC---CCCCCChHHHHHHHHHHHHHHH
Confidence 998 77764 23677754 3445567888999999988654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=8.6e-11 Score=114.32 Aligned_cols=107 Identities=19% Similarity=0.152 Sum_probs=81.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|++|+ +++..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++|||+
T Consensus 50 ~~~~~~~~Dl~~~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~ 122 (338)
T 1udb_A 50 KHPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred CcceEEEccCCCH------HHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence 3578899999986 34455554 599999999986543 3345678999999999999999876 8899999
Q ss_pred eCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||.+++|.. .+++|+.+..| +...|+.+|...|+++..+
T Consensus 123 SS~~~~g~~~~~~~~e~~~~~~--~~~~Y~~sK~~~e~~~~~~ 163 (338)
T 1udb_A 123 SSATVYGDNPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp EEGGGGCSCCSSSBCTTSCCCC--CSSHHHHHHHHHHHHHHHH
T ss_pred ccHHHhCCCCCCCcCcccCCCC--CCChHHHHHHHHHHHHHHH
Confidence 999888753 45677543322 2557889999999988764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=6.5e-11 Score=117.30 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=82.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCc-----e
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLE-----A 375 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-----r 375 (422)
+++++.+|++|+ +++..++++ +|+|||+||..... .++...+++|+.||.+++++|++.+ ++ +
T Consensus 84 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~ 156 (381)
T 1n7h_A 84 LMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVK 156 (381)
T ss_dssp CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCE
T ss_pred ceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccE
Confidence 788999999986 345566554 69999999987753 3456678999999999999999865 65 9
Q ss_pred EEEEeCCccccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|||+||.+++|.. .+++|+. |..|.+.|+.+|+..|.++..+
T Consensus 157 ~v~~SS~~vyg~~~~~~~E~~---~~~~~~~Y~~sK~~~E~~~~~~ 199 (381)
T 1n7h_A 157 YYQAGSSEMFGSTPPPQSETT---PFHPRSPYAASKCAAHWYTVNY 199 (381)
T ss_dssp EEEEEEGGGGTTSCSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHhCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHH
Confidence 9999999888753 2677754 4455567889999999888754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=115.15 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=82.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCC---ceE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHL---EAL 376 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~r~ 376 (422)
.+++++.+|++|+ +++..+++ ++|+|||+||..... .++...+++|+.||.+++++|++.+ + ++|
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~i 127 (372)
T 1db3_A 55 PKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRF 127 (372)
T ss_dssp CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEE
Confidence 4688999999986 34556655 479999999986533 3455678999999999999999976 6 799
Q ss_pred EEEeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+||.+++|.. .+++|+. |..|.+.|+.+|...|.++..+
T Consensus 128 v~~SS~~v~g~~~~~~~~E~~---~~~~~~~Y~~sK~~~e~~~~~~ 170 (372)
T 1db3_A 128 YQASTSELYGLVQEIPQKETT---PFYPRSPYAVAKLYAYWITVNY 170 (372)
T ss_dssp EEEEEGGGGTTCCSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred EEeCChhhhCCCCCCCCCccC---CCCCCChHHHHHHHHHHHHHHH
Confidence 999999888753 3677754 4445567888999999888754
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=112.58 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=79.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh--hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD--EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
++++++.+|++|+ +++++++++ +|+|||+||..... .++. +++|+.||.+++++|++.+ +++|||+|
T Consensus 66 ~~~~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~S 136 (333)
T 2q1w_A 66 PNLTFVEGSIADH------ALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNN-VGRFVYFQ 136 (333)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCceEEEEeCCCH------HHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHhC-CCEEEEEC
Confidence 5789999999986 355666666 99999999987642 2333 8999999999999999976 89999999
Q ss_pred CCcccc----CC-CcccccccCCCCCHH-HHHHHHhhCCHHHhhh
Q psy16526 381 TAYCNC----DR-EEVREIIYSPPYDPQ-KIIETMEWMDDSLVNT 419 (422)
Q Consensus 381 S~~~~g----~~-~~~~E~~~~~p~~p~-~~y~~~K~~~E~~~~~ 419 (422)
|.+++| .. .+++|+. .|. ..|+.+|+..|+++..
T Consensus 137 S~~~~g~~~~~~~~~~~E~~-----~p~~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 137 TALCYGVKPIQQPVRLDHPR-----NPANSSYAISKSANEDYLEY 176 (333)
T ss_dssp EGGGGCSCCCSSSBCTTSCC-----CCTTCHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCcccCCCCcCCCC-----CCCCCchHHHHHHHHHHHHh
Confidence 998887 32 2566654 344 5788899999999876
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.4e-11 Score=113.82 Aligned_cols=109 Identities=14% Similarity=0.225 Sum_probs=76.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhh-h-HHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE-A-LKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~-~-~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
+++++.||++|++ +++.+++++|+|||+|+...... + .++.+++|+.||.+++++|++.+++++|||+||.+
T Consensus 54 ~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~ 127 (322)
T 2p4h_X 54 KLHFFNADLSNPD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGS 127 (322)
T ss_dssp HEEECCCCTTCGG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGG
T ss_pred ceEEEecCCCCHH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 6789999999874 45777889999999998754321 2 23478999999999999999873389999999986
Q ss_pred cc-cC---CCcccccccCC-----CCCHH-HHHHHHhhCCHHHhhhc
Q psy16526 384 CN-CD---REEVREIIYSP-----PYDPQ-KIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~-g~---~~~~~E~~~~~-----p~~p~-~~y~~~K~~~E~~~~~~ 420 (422)
++ +. ..+++|+.... |.+|. ..|+.+|.++|+++..+
T Consensus 128 ~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~ 174 (322)
T 2p4h_X 128 AVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEF 174 (322)
T ss_dssp GTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred HcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHH
Confidence 43 22 12456643211 11222 26999999999887654
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.08 E-value=5.7e-11 Score=115.62 Aligned_cols=110 Identities=16% Similarity=0.187 Sum_probs=76.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hhH-HHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EAL-KLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~~-~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
++++++.+|++|++. +..+++++|+|||+||..... .++ ++.+++|+.||.+++++|++.+++++|||+||.
T Consensus 59 ~~~~~~~~Dl~d~~~------~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 59 GDLKIFRADLTDELS------FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp SCEEEEECCTTTSSS------SHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred CcEEEEecCCCChHH------HHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 468899999999753 366778999999999976543 223 347899999999999999987448999999997
Q ss_pred cc-ccC---C--CcccccccCC-----CCCHH-HHHHHHhhCCHHHhhhc
Q psy16526 383 YC-NCD---R--EEVREIIYSP-----PYDPQ-KIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~-~g~---~--~~~~E~~~~~-----p~~p~-~~y~~~K~~~E~~~~~~ 420 (422)
.+ ++. . .+++|+.... |.+|. ..|+.+|.++|+++..+
T Consensus 133 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 182 (338)
T 2rh8_A 133 AAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKF 182 (338)
T ss_dssp HHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHH
T ss_pred HHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHH
Confidence 53 221 1 2677764321 22221 25889999999887654
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=4e-10 Score=109.93 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=83.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.+|+.++.+ .++|+|||+||..... .++...+++|+.||.+++++|++.+ + ++||+||
T Consensus 75 ~~~~~~~~D~~~~~~-----------~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS 141 (343)
T 2b69_A 75 ENFELINHDVVEPLY-----------IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLAST 141 (343)
T ss_dssp TTEEEEECCTTSCCC-----------CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEE
T ss_pred CceEEEeCccCChhh-----------cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECc
Confidence 578999999998742 4799999999987643 3456678999999999999999976 5 9999999
Q ss_pred CccccCC--CcccccccC--CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYS--PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~--~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|.. .+++|+.+. .|..|.+.|+.+|+.+|+++..+
T Consensus 142 ~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 142 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp GGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence 9888753 467775432 46778889999999999998654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-10 Score=112.20 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=59.2
Q ss_pred EEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 309 PILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
++.+|++|++. +..+++ ++|+|||+||..... .++.+.+++|+.||.+++++|++.+ + ++||+||.+
T Consensus 41 ~~~~Dl~d~~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~ 112 (315)
T 2ydy_A 41 FEQVNLLDSNA------VHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDY 112 (315)
T ss_dssp -----------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGG
T ss_pred eEEecCCCHHH------HHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHH
Confidence 77899998752 244544 589999999986543 3455678999999999999999976 5 999999998
Q ss_pred cccC-CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCD-REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~-~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++. ..+++|+.+ ..|.+.|+.+|...|+++..+
T Consensus 113 v~~~~~~~~~E~~~---~~~~~~Y~~sK~~~e~~~~~~ 147 (315)
T 2ydy_A 113 VFDGTNPPYREEDI---PAPLNLYGKTKLDGEKAVLEN 147 (315)
T ss_dssp GSCSSSCSBCTTSC---CCCCSHHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCC---CCCcCHHHHHHHHHHHHHHHh
Confidence 8875 346778644 444567888999999998765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.3e-11 Score=108.27 Aligned_cols=96 Identities=11% Similarity=0.178 Sum_probs=79.5
Q ss_pred CcEEEEeCcCCC-CCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPILGDITE-PELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gDl~~-~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
++++++.+|++| + +++.++++++|+|||+||.... +.+++|+.|+.+++++|++.+ +++|||+||.+
T Consensus 41 ~~~~~~~~D~~d~~------~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~ 108 (219)
T 3dqp_A 41 NNVKAVHFDVDWTP------EEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIF 108 (219)
T ss_dssp TTEEEEECCTTSCH------HHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTT
T ss_pred CCceEEEecccCCH------HHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHhC-CCEEEEECccc
Confidence 689999999998 5 5667788899999999998652 257899999999999999986 89999999988
Q ss_pred cccCCCcccccccCCCCCHHHHHHHHhhCCHHHh
Q psy16526 384 CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLV 417 (422)
Q Consensus 384 ~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~ 417 (422)
+++.. +..| .|..|...|+.+|...|+++
T Consensus 109 ~~~~~-~~~e----~~~~~~~~Y~~sK~~~e~~~ 137 (219)
T 3dqp_A 109 SLQPE-KWIG----AGFDALKDYYIAKHFADLYL 137 (219)
T ss_dssp TTCGG-GCCS----HHHHHTHHHHHHHHHHHHHH
T ss_pred ccCCC-cccc----cccccccHHHHHHHHHHHHH
Confidence 76542 3344 34567889999999999988
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.2e-10 Score=111.71 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=78.2
Q ss_pred EeCcCCCCCCCCCHHHHHHHhcC-----ccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 310 ILGDITEPELGISQNDQKILKQN-----VSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 310 v~gDl~~~~~~l~~~~~~~~~~~-----~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
+.+|++++ +.++.+.++ +|+|||+||..... .++.+.+++|+.||.+++++|++.+ + +|||+||.+
T Consensus 47 ~~~d~~~~------~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~ 118 (310)
T 1eq2_A 47 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAA 118 (310)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGG
T ss_pred eccccccH------HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHH
Confidence 56787765 345666664 99999999987642 4567789999999999999999987 7 999999998
Q ss_pred cccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|.. .+++|+.+..| .+.|+.+|..+|+++..+
T Consensus 119 v~g~~~~~~~~E~~~~~p---~~~Y~~sK~~~e~~~~~~ 154 (310)
T 1eq2_A 119 TYGGRTSDFIESREYEKP---LNVYGYSKFLFDEYVRQI 154 (310)
T ss_dssp GGTTCCSCBCSSGGGCCC---SSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCCCCCCCC---CChhHHHHHHHHHHHHHH
Confidence 88763 36778664444 457888999999988765
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.9e-10 Score=106.06 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=77.1
Q ss_pred EeCcCCCCCCCCCHHHHHHHhcC--ccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 310 ILGDITEPELGISQNDQKILKQN--VSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 310 v~gDl~~~~~~l~~~~~~~~~~~--~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
+.+|++|+ +++..++++ +|+|||+||..... .++++.+++|+.|+.+++++|++.+ + ++||+||.++
T Consensus 39 ~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~ 110 (273)
T 2ggs_A 39 YKLDLTDF------PRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYV 110 (273)
T ss_dssp EECCTTSH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGG
T ss_pred ceeccCCH------HHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEeccee
Confidence 77899876 345666654 99999999987643 4566779999999999999999876 5 8999999988
Q ss_pred ccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++.. .+++|+. |.+|.+.|+.+|...|++++.
T Consensus 111 ~~~~~~~~~e~~---~~~~~~~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 111 FDGEKGNYKEED---IPNPINYYGLSKLLGETFALQ 143 (273)
T ss_dssp SCSSSCSBCTTS---CCCCSSHHHHHHHHHHHHHCC
T ss_pred EcCCCCCcCCCC---CCCCCCHHHHHHHHHHHHHhC
Confidence 7653 3677754 344556788899999988753
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-10 Score=109.57 Aligned_cols=94 Identities=16% Similarity=0.309 Sum_probs=77.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.||++|+ +.+..+++++|+|||+||..... .++.+.+++|+.||.+++++|++.+ +++||++||
T Consensus 70 ~~v~~~~~Dl~d~------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS 142 (344)
T 2gn4_A 70 PRMRFFIGDVRDL------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALST 142 (344)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred CCEEEEECCCCCH------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecC
Confidence 5789999999986 45677888999999999987643 3455679999999999999999987 899999999
Q ss_pred CccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++ .| .+.|+.+|.+.|.++.++
T Consensus 143 ~~~~------------~p---~~~Y~~sK~~~E~~~~~~ 166 (344)
T 2gn4_A 143 DKAA------------NP---INLYGATKLCSDKLFVSA 166 (344)
T ss_dssp GGGS------------SC---CSHHHHHHHHHHHHHHHG
T ss_pred CccC------------CC---ccHHHHHHHHHHHHHHHH
Confidence 6432 12 357888999999988765
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.6e-10 Score=121.18 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=83.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
.+++++.+|++|+ +++.++++ ++|+|||+||..... ....+.+++|+.||.+++++|++.+ +++|||+
T Consensus 61 ~~v~~v~~Dl~d~------~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~ 133 (699)
T 1z45_A 61 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFS 133 (699)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 4678899999986 35566666 899999999987643 2345678999999999999999876 8999999
Q ss_pred eCCccccCC------CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDR------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||++++|.. .+++|+. |..|...|+.+|+..|+++..+
T Consensus 134 SS~~vyg~~~~~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 177 (699)
T 1z45_A 134 SSATVYGDATRFPNMIPIPEEC---PLGPTNPYGHTKYAIENILNDL 177 (699)
T ss_dssp EEGGGGCCGGGSTTCCSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred CcHHHhCCCccccccCCccccC---CCCCCChHHHHHHHHHHHHHHH
Confidence 999888752 3566643 4455667889999999988764
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-10 Score=117.40 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=85.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.+++++.||++|++ +.++.+++++|+|||+||..+.. .++.+.+++|+.||.+++++|++.+ ++|||+||
T Consensus 360 ~~v~~v~~Dl~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS 432 (660)
T 1z7e_A 360 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPST 432 (660)
T ss_dssp TTEEEEECCTTTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECC
T ss_pred CceEEEECCCCCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEec
Confidence 57899999999862 22456667899999999987632 4566778999999999999999875 89999999
Q ss_pred CccccCC--CcccccccC---CC-CCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCDR--EEVREIIYS---PP-YDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~~--~~~~E~~~~---~p-~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++|.. .+++|+.+. .| ..|.+.|+.+|+++|+++..+
T Consensus 433 ~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~ 477 (660)
T 1z7e_A 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 477 (660)
T ss_dssp GGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHH
Confidence 9888753 457776532 23 357789999999999998654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.9e-10 Score=112.88 Aligned_cols=100 Identities=18% Similarity=0.234 Sum_probs=78.2
Q ss_pred EeCcCCCCCCCCCHHHHHHHhc-----CccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 310 ILGDITEPELGISQNDQKILKQ-----NVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 310 v~gDl~~~~~~l~~~~~~~~~~-----~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
+.+|++++ +.++.+.+ ++|+|||+||.... ..++++.+++|+.||.+++++|++.+ + +|||+||.+
T Consensus 94 ~~~d~~~~------~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~ 165 (357)
T 2x6t_A 94 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAA 165 (357)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGG
T ss_pred EeeecCcH------HHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchH
Confidence 56777765 34566665 59999999998764 24567789999999999999999977 7 999999998
Q ss_pred cccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|.. .+++|+.+.. |.+.|+.+|..+|+++..+
T Consensus 166 v~g~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~~~~~ 201 (357)
T 2x6t_A 166 TYGGRTSDFIESREYEK---PLNVFGYSKFLFDEYVRQI 201 (357)
T ss_dssp GGCSCSSCCCSSGGGCC---CSSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCcCCcCCCC---CCChhHHHHHHHHHHHHHH
Confidence 88763 3678865444 4557888999999988765
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.6e-09 Score=100.12 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=76.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.+|++|++ +++.+++++|+|||+||......+.+..+++|+.|+.+++++|++.+ ++++|++||.++
T Consensus 63 ~~~~~~~~D~~d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~ 135 (242)
T 2bka_A 63 KNVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGA 135 (242)
T ss_dssp GGCEEEECCGGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTC
T ss_pred CCceEEecCcCCHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcC
Confidence 46889999999874 34667789999999999865555566778999999999999999876 889999999877
Q ss_pred ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++. +. ..|+.+|...|++++.+
T Consensus 136 ~~~-----------~~---~~Y~~sK~~~e~~~~~~ 157 (242)
T 2bka_A 136 DKS-----------SN---FLYLQVKGEVEAKVEEL 157 (242)
T ss_dssp CTT-----------CS---SHHHHHHHHHHHHHHTT
T ss_pred CCC-----------Cc---chHHHHHHHHHHHHHhc
Confidence 642 22 35788899999888764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=3.1e-09 Score=104.16 Aligned_cols=91 Identities=12% Similarity=0.049 Sum_probs=71.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC---ccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcC-CCceEE---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN---VSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMT-HLEALI--- 377 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~---~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v--- 377 (422)
.+++++.+|++|+ +++.+++++ +|+|||+||... .++.+.+++|+.||.+++++|++.+ ++++||
T Consensus 48 ~~~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~ 119 (364)
T 2v6g_A 48 NPINYVQCDISDP------DDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQT 119 (364)
T ss_dssp SCCEEEECCTTSH------HHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEEC
T ss_pred CceEEEEeecCCH------HHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEecc
Confidence 4688999999986 456777777 999999999864 3566778999999999999999872 389998
Q ss_pred ----EEeCCccccCC----CcccccccCCC-CCHH
Q psy16526 378 ----HVSTAYCNCDR----EEVREIIYSPP-YDPQ 403 (422)
Q Consensus 378 ----~~SS~~~~g~~----~~~~E~~~~~p-~~p~ 403 (422)
|+||.+++|.. .+++|+.+..| .++|
T Consensus 120 g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y 154 (364)
T 2v6g_A 120 GRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY 154 (364)
T ss_dssp CTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred CceEEEechhhccccccCCCCCCccccCCccchhh
Confidence 79998888763 46778765444 4555
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.4e-09 Score=104.51 Aligned_cols=84 Identities=15% Similarity=0.157 Sum_probs=67.6
Q ss_pred CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccCC--CcccccccCCCCCHHHHH
Q psy16526 332 NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDR--EEVREIIYSPPYDPQKII 406 (422)
Q Consensus 332 ~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~~--~~~~E~~~~~p~~p~~~y 406 (422)
++|+|||+||..+.. .++...++ |+.||.+++++|++.+ +++|||+||.+++|.. .+++|+. |..|.+.|
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~---~~~p~~~Y 143 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDS---PLSPRSPY 143 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTS---CCCCCSHH
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCC---CCCCCChh
Confidence 789999999987743 23334567 9999999999999987 8999999999888763 4678854 45556678
Q ss_pred HHHhhCCHHHhhhc
Q psy16526 407 ETMEWMDDSLVNTL 420 (422)
Q Consensus 407 ~~~K~~~E~~~~~~ 420 (422)
+.+|+.+|+++..+
T Consensus 144 ~~sK~~~E~~~~~~ 157 (321)
T 3vps_A 144 AASKVGLEMVAGAH 157 (321)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 89999999988765
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=4.9e-09 Score=93.98 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=76.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.+|++|+ +++..+++++|+|||+|+..... + ..++|+.++.+++++|++.+ ++++||+||..
T Consensus 45 ~~~~~~~~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~~-~---~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~ 113 (206)
T 1hdo_A 45 PRPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDL-S---PTTVMSEGARNIVAAMKAHG-VDKVVACTSAF 113 (206)
T ss_dssp CCCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCC-S---CCCHHHHHHHHHHHHHHHHT-CCEEEEECCGG
T ss_pred CCceEEEEecCCCH------HHHHHHHcCCCEEEECccCCCCC-C---ccchHHHHHHHHHHHHHHhC-CCeEEEEeeee
Confidence 45789999999986 45678888999999999976531 1 23589999999999999876 89999999997
Q ss_pred cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+++.... .|. +...|..+|...|++++.
T Consensus 114 ~~~~~~~-------~~~-~~~~y~~~K~~~e~~~~~ 141 (206)
T 1hdo_A 114 LLWDPTK-------VPP-RLQAVTDDHIRMHKVLRE 141 (206)
T ss_dssp GTSCTTC-------SCG-GGHHHHHHHHHHHHHHHH
T ss_pred eccCccc-------ccc-cchhHHHHHHHHHHHHHh
Confidence 7754321 111 677899999999988754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.79 E-value=6.2e-09 Score=98.63 Aligned_cols=92 Identities=17% Similarity=0.103 Sum_probs=71.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~~ 383 (422)
.+++++.+|++|.+ +.++|+|||+||...... ..+.+++++|++. .++++|||+||.+
T Consensus 47 ~~~~~~~~D~~d~~-----------~~~~d~vi~~a~~~~~~~----------~~~~~l~~a~~~~~~~~~~~v~~Ss~~ 105 (286)
T 3ius_A 47 SGAEPLLWPGEEPS-----------LDGVTHLLISTAPDSGGD----------PVLAALGDQIAARAAQFRWVGYLSTTA 105 (286)
T ss_dssp TTEEEEESSSSCCC-----------CTTCCEEEECCCCBTTBC----------HHHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred CCCeEEEecccccc-----------cCCCCEEEECCCcccccc----------HHHHHHHHHHHhhcCCceEEEEeecce
Confidence 57899999999842 468999999999875432 1367899999883 2389999999998
Q ss_pred cccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 384 CNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 384 ~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||.. .+++|+. |..|.+.|+.+|+.+|+++..+
T Consensus 106 vyg~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 141 (286)
T 3ius_A 106 VYGDHDGAWVDETT---PLTPTAARGRWRVMAEQQWQAV 141 (286)
T ss_dssp GGCCCTTCEECTTS---CCCCCSHHHHHHHHHHHHHHHS
T ss_pred ecCCCCCCCcCCCC---CCCCCCHHHHHHHHHHHHHHhh
Confidence 88764 3678865 4445567889999999998765
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-08 Score=93.42 Aligned_cols=96 Identities=9% Similarity=0.140 Sum_probs=74.8
Q ss_pred CcE-EEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKI-KPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v-~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++ +++.+|++ ..+ .+.+.++|+|||+||.... .+++..+++|+.|+.+++++|++.+ +++|||+||..
T Consensus 64 ~~~~~~~~~Dl~-~~~-------~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~ 133 (236)
T 3e8x_A 64 RGASDIVVANLE-EDF-------SHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVG 133 (236)
T ss_dssp TTCSEEEECCTT-SCC-------GGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTT
T ss_pred CCCceEEEcccH-HHH-------HHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCC
Confidence 367 89999999 322 4566799999999997653 4567789999999999999999886 89999999943
Q ss_pred cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.. + |. .| .+...|+.+|...|++++.
T Consensus 134 ~~~---~--~~---~~-~~~~~Y~~sK~~~e~~~~~ 160 (236)
T 3e8x_A 134 TVD---P--DQ---GP-MNMRHYLVAKRLADDELKR 160 (236)
T ss_dssp CSC---G--GG---SC-GGGHHHHHHHHHHHHHHHH
T ss_pred CCC---C--CC---Ch-hhhhhHHHHHHHHHHHHHH
Confidence 321 1 21 12 5778999999999998763
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=98.69 E-value=4.1e-09 Score=103.95 Aligned_cols=90 Identities=10% Similarity=0.006 Sum_probs=74.2
Q ss_pred EEEEeCcC-CCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCc-eEEEEeCCcc
Q psy16526 307 IKPILGDI-TEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLE-ALIHVSTAYC 384 (422)
Q Consensus 307 v~~v~gDl-~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-r~v~~SS~~~ 384 (422)
++++.+|. +|+ +++..+++++|+|||+||..+.. ++.+.+++|+.|+.+++++|++.+ ++ +|||+||.++
T Consensus 26 ~~v~~~d~~~d~------~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~ 97 (369)
T 3st7_A 26 HHIFEVHRQTKE------EELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQA 97 (369)
T ss_dssp CEEEECCTTCCH------HHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGG
T ss_pred CEEEEECCCCCH------HHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhh
Confidence 47888898 554 56788888999999999987643 445568899999999999999987 66 9999999988
Q ss_pred ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++ .+.|+.+|+.+|+++.++
T Consensus 98 ~~----------------~~~Y~~sK~~~E~~~~~~ 117 (369)
T 3st7_A 98 TQ----------------DNPYGESKLQGEQLLREY 117 (369)
T ss_dssp GS----------------CSHHHHHHHHHHHHHHHH
T ss_pred cC----------------CCCchHHHHHHHHHHHHH
Confidence 75 346888999999998764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=9.6e-09 Score=95.01 Aligned_cols=99 Identities=12% Similarity=0.159 Sum_probs=74.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh----------------hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD----------------EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~----------------~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.+++++.+|++|+ +++.++++++|+|||+||..... +...+.+++|+.|+.+++++|+
T Consensus 48 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (253)
T 1xq6_A 48 GEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121 (253)
T ss_dssp CCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred CCeeEEEecCCCH------HHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH
Confidence 4577899999986 46778888999999999975421 0112347899999999999999
Q ss_pred hcCCCceEEEEeCCccccCCCcccccccCCCCCHHH--HHHHHhhCCHHHhhh
Q psy16526 369 EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQK--IIETMEWMDDSLVNT 419 (422)
Q Consensus 369 ~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~--~y~~~K~~~E~~~~~ 419 (422)
+.+ +++|||+||.+++.. ..|.++|+ .|..+|...|.+++.
T Consensus 122 ~~~-~~~iv~~SS~~~~~~---------~~~~~~~~~~~y~~sK~~~e~~~~~ 164 (253)
T 1xq6_A 122 VAG-VKHIVVVGSMGGTNP---------DHPLNKLGNGNILVWKRKAEQYLAD 164 (253)
T ss_dssp HHT-CSEEEEEEETTTTCT---------TCGGGGGGGCCHHHHHHHHHHHHHT
T ss_pred HcC-CCEEEEEcCccCCCC---------CCccccccchhHHHHHHHHHHHHHh
Confidence 876 899999999876421 22344444 377889999988764
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=98.68 E-value=3.6e-08 Score=93.27 Aligned_cols=86 Identities=12% Similarity=0.182 Sum_probs=68.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.+|++|+ +++..+++++|+|||+||.. .. . ++|+.|+.+++++|++.+ +++|||+||.++
T Consensus 45 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~-~~----~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 45 QGVEVRHGDYNQP------ESLQKAFAGVSKLLFISGPH-YD----N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFA 110 (287)
T ss_dssp TTCEEEECCTTCH------HHHHHHTTTCSEEEECCCCC-SC----H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTG
T ss_pred cCCeEEEeccCCH------HHHHHHHhcCCEEEEcCCCC-cC----c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCC
Confidence 4678999999986 46678888999999999963 21 1 579999999999999976 899999999876
Q ss_pred ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+. .|. .|+.+|...|+++++
T Consensus 111 ~~-----------~~~----~y~~~K~~~E~~~~~ 130 (287)
T 2jl1_A 111 EE-----------SII----PLAHVHLATEYAIRT 130 (287)
T ss_dssp GG-----------CCS----THHHHHHHHHHHHHH
T ss_pred CC-----------CCC----chHHHHHHHHHHHHH
Confidence 42 121 478889999988764
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.65 E-value=5.5e-09 Score=94.52 Aligned_cols=94 Identities=10% Similarity=0.001 Sum_probs=72.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.++++++.+|++|++ ++.+++ +|+|||+||..... .+.++.+++|+.++.+++++|++.+ ++++||+||.
T Consensus 45 ~~~~~~~~~D~~~~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~ 115 (215)
T 2a35_A 45 HPRLDNPVGPLAELL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSAL 115 (215)
T ss_dssp CTTEECCBSCHHHHG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCT
T ss_pred CCCceEEeccccCHH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCc
Confidence 357888899998763 222333 89999999976532 4566778999999999999999976 8999999998
Q ss_pred ccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++. |. ..|+.+|...|++++.+
T Consensus 116 ~~~~~-----------~~---~~y~~sK~~~e~~~~~~ 139 (215)
T 2a35_A 116 GADAK-----------SS---IFYNRVKGELEQALQEQ 139 (215)
T ss_dssp TCCTT-----------CS---SHHHHHHHHHHHHHTTS
T ss_pred ccCCC-----------Cc---cHHHHHHHHHHHHHHHc
Confidence 77642 22 36788999999988753
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.2e-08 Score=92.85 Aligned_cols=95 Identities=7% Similarity=-0.068 Sum_probs=68.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.+|++|++ + ..+.++|+|||+||...... ..++|+.++++++++|++.+ +++|++||+.+
T Consensus 43 ~~~~~~~~D~~d~~------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~ 108 (224)
T 3h2s_A 43 ATVATLVKEPLVLT------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNSD--TLAVFILGSAS 108 (224)
T ss_dssp TTSEEEECCGGGCC------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTCC--CEEEEECCGGG
T ss_pred CCceEEeccccccc------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHcC--CcEEEEeccee
Confidence 57899999999985 1 56689999999999862111 24679999999999999976 89999999754
Q ss_pred ccC-CC----cccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 385 NCD-RE----EVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 385 ~g~-~~----~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
+.. .. +.+|+..+ .|.+.|+.+|...|.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~---~~~~~y~~sK~~~e~~ 142 (224)
T 3h2s_A 109 LAMPGADHPMILDFPESA---ASQPWYDGALYQYYEY 142 (224)
T ss_dssp SBCTTCSSCGGGGCCGGG---GGSTTHHHHHHHHHHH
T ss_pred eccCCCCccccccCCCCC---ccchhhHHHHHHHHHH
Confidence 332 11 33443333 3355677888888754
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-08 Score=92.35 Aligned_cols=94 Identities=13% Similarity=-0.029 Sum_probs=62.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
++++++.+|++|++ + +.+.++|+|||+||.... ..+.|+.++++++++|++.+ ++++|++||..+
T Consensus 42 ~~~~~~~~D~~d~~------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~ 106 (221)
T 3ew7_A 42 KDINILQKDIFDLT------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAAS 106 (221)
T ss_dssp SSSEEEECCGGGCC------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-
T ss_pred CCCeEEeccccChh------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhcC-CceEEEEecceE
Confidence 57899999999985 1 566899999999998432 25679999999999999986 899999999855
Q ss_pred ccCC---CcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 385 NCDR---EEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 385 ~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
+... .+..|+....|.+ .|+.+|...|.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~---~y~~~k~~~e~~ 138 (221)
T 3ew7_A 107 LQIDEDGNTLLESKGLREAP---YYPTARAQAKQL 138 (221)
T ss_dssp ------------------CC---CSCCHHHHHHHH
T ss_pred EEcCCCCccccccCCCCCHH---HHHHHHHHHHHH
Confidence 4332 2344543333443 455666666654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.55 E-value=5.8e-08 Score=100.39 Aligned_cols=96 Identities=22% Similarity=0.127 Sum_probs=65.8
Q ss_pred EEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh----hhhHHHHHHhhHHHHHHHHHH-HHhcCCCceEEEEeCCc
Q psy16526 309 PILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF----DEALKLSVTINMLGTKRLVEL-CHEMTHLEALIHVSTAY 383 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~-a~~~~~~~r~v~~SS~~ 383 (422)
.+.+|+.+.. ...+.++|+|||+||.... .......+++|+.||.+|+++ |++. ++++|||+||.+
T Consensus 186 ~v~~d~~~~~--------~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~-~~~r~V~~SS~~ 256 (516)
T 3oh8_A 186 KRFWDPLNPA--------SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAEST-QCTTMISASAVG 256 (516)
T ss_dssp CEECCTTSCC--------TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCS-SCCEEEEEEEGG
T ss_pred ceeecccchh--------HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeCcce
Confidence 3667877542 3455789999999998642 235566789999999999999 4554 489999999998
Q ss_pred ccc-C--CCcccccccCCCCCHHHHHHHHhhCCHHHh
Q psy16526 384 CNC-D--REEVREIIYSPPYDPQKIIETMEWMDDSLV 417 (422)
Q Consensus 384 ~~g-~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~ 417 (422)
+|| . ..+++|+.+. |.+ .|+.+|...|.++
T Consensus 257 vyg~~~~~~~~~E~~~~-~~~---~y~~~~~~~E~~~ 289 (516)
T 3oh8_A 257 FYGHDRGDEILTEESES-GDD---FLAEVCRDWEHAT 289 (516)
T ss_dssp GGCSEEEEEEECTTSCC-CSS---HHHHHHHHHHHTT
T ss_pred EecCCCCCCccCCCCCC-CcC---hHHHHHHHHHHHH
Confidence 887 2 2357776543 444 4555555555443
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.53 E-value=4.4e-08 Score=88.07 Aligned_cols=94 Identities=5% Similarity=0.046 Sum_probs=72.3
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEE
Q psy16526 308 KPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMTHLEALI 377 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v 377 (422)
+++.+|++|+ ++++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++++.+ .+++|
T Consensus 45 ~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv 117 (207)
T 2yut_A 45 RALPADLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAV 117 (207)
T ss_dssp EECCCCTTSH------HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEE
T ss_pred cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEE
Confidence 7889999986 34566665 89999999997542 13456679999999999999997654 68999
Q ss_pred EEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 378 HVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 378 ~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++||..++. |..+...|+.+|...|.+++.+
T Consensus 118 ~~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~ 148 (207)
T 2yut_A 118 FFGAYPRYV------------QVPGFAAYAAAKGALEAYLEAA 148 (207)
T ss_dssp EECCCHHHH------------SSTTBHHHHHHHHHHHHHHHHH
T ss_pred EEcChhhcc------------CCCCcchHHHHHHHHHHHHHHH
Confidence 999987652 2234567888998888887654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.7e-07 Score=89.38 Aligned_cols=110 Identities=14% Similarity=0.141 Sum_probs=81.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-----hhhHHHHHHhhHHHHHHHHHHHHhcCCCce
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-----DEALKLSVTINMLGTKRLVELCHEMTHLEA 375 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r 375 (422)
..+++++.+|++|+ ++++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++.... .++
T Consensus 61 ~~~~~~~~~Dl~d~------~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~r 133 (291)
T 3rd5_A 61 AGQVEVRELDLQDL------SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDR 133 (291)
T ss_dssp SSEEEEEECCTTCH------HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEE
T ss_pred cCCeeEEEcCCCCH------HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 45789999999987 34555554 67999999997542 13445679999999999999998865 579
Q ss_pred EEEEeCCccccCCCcccc-cccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDREEVRE-IIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~~~~~E-~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|++||..++......++ .....|..+...|+.+|...+.+.+.+
T Consensus 134 iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 179 (291)
T 3rd5_A 134 VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSEL 179 (291)
T ss_dssp EEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHH
Confidence 999999866543221111 111357788999999999988877654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.48 E-value=3.5e-08 Score=91.52 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=72.6
Q ss_pred EeCcCCCCCCCCCHHHHHHHhc----CccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy16526 310 ILGDITEPELGISQNDQKILKQ----NVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM---THLEALIHVSTA 382 (422)
Q Consensus 310 v~gDl~~~~~~l~~~~~~~~~~----~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~r~v~~SS~ 382 (422)
+.+|++++ ++++.+.+ ++|+|||+||......+++..+++|+.|+.++++++.+. .+.+++|++||.
T Consensus 42 ~~~D~~~~------~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 115 (255)
T 2dkn_A 42 LSTPGGRE------TAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115 (255)
T ss_dssp TTSHHHHH------HHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred ccCCcccH------HHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence 45666554 33445544 899999999987644567778999999999999988764 225899999998
Q ss_pred ccccCC---Ccccccc-------c----CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDR---EEVREII-------Y----SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~---~~~~E~~-------~----~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++.. .+..|.. + ..+..+...|+.+|...|.+++.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~ 167 (255)
T 2dkn_A 116 AATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRN 167 (255)
T ss_dssp GGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHH
Confidence 777542 1111110 0 011247789999999999888765
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.9e-07 Score=84.58 Aligned_cols=97 Identities=11% Similarity=0.100 Sum_probs=71.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh------hhhHHHHHHhhHHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF------DEALKLSVTINMLGTKRLVELCH--- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~--- 368 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 60 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 133 (255)
T 1fmc_A 60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46889999999863 3444443 89999999997542 23456678999999999999885
Q ss_pred -hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 -EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 -~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..++.. ..+...|+.+|...|.+++.+
T Consensus 134 ~~~~-~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 173 (255)
T 1fmc_A 134 EKNG-GGVILTITSMAAENK------------NINMTSYASSKAAASHLVRNM 173 (255)
T ss_dssp HHHT-CEEEEEECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcC-CcEEEEEcchhhcCC------------CCCCcccHHHHHHHHHHHHHH
Confidence 334 689999999866432 224567888998888877654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.2e-07 Score=90.65 Aligned_cols=88 Identities=15% Similarity=0.234 Sum_probs=70.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+++++.||++|+ +++..+++ ++|+|||+||.. |+.++.+++++|++.+.+++||+ | .
T Consensus 60 ~~v~~~~~Dl~d~------~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S-~ 119 (346)
T 3i6i_A 60 KGAIIVYGLINEQ------EAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S-E 119 (346)
T ss_dssp TTCEEEECCTTCH------HHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S-C
T ss_pred CCcEEEEeecCCH------HHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c-c
Confidence 5789999999986 46778888 999999999973 89999999999999866899986 3 3
Q ss_pred ccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 383 YCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 383 ~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
|+ . ..+| ..|..|...|..+|+..|+++++
T Consensus 120 ~g--~--~~~e---~~~~~p~~~y~~sK~~~e~~l~~ 149 (346)
T 3i6i_A 120 FG--H--DVNR---ADPVEPGLNMYREKRRVRQLVEE 149 (346)
T ss_dssp CS--S--CTTT---CCCCTTHHHHHHHHHHHHHHHHH
T ss_pred cC--C--CCCc---cCcCCCcchHHHHHHHHHHHHHH
Confidence 32 2 2344 34667788899999999999875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.5e-07 Score=88.74 Aligned_cols=84 Identities=7% Similarity=0.043 Sum_probs=62.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+||.. . ..|+.+|++++++|++.+ +++|||+||.++
T Consensus 44 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~-----~----~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~ 107 (286)
T 2zcu_A 44 QGITVRQADYGDE------AALTSALQGVEKLLLISSSE-----V----GQRAPQHRNVINAAKAAG-VKFIAYTSLLHA 107 (286)
T ss_dssp TTCEEEECCTTCH------HHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHHT-CCEEEEEEETTT
T ss_pred CCCeEEEcCCCCH------HHHHHHHhCCCEEEEeCCCC-----c----hHHHHHHHHHHHHHHHcC-CCEEEEECCCCC
Confidence 4678999999986 46678888999999999852 1 258999999999999987 899999999876
Q ss_pred ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+. .| ..|+.+|...|+++.+
T Consensus 108 ~~-----------~~----~~y~~sK~~~e~~~~~ 127 (286)
T 2zcu_A 108 DT-----------SP----LGLADEHIETEKMLAD 127 (286)
T ss_dssp TT-----------CC----STTHHHHHHHHHHHHH
T ss_pred CC-----------Cc----chhHHHHHHHHHHHHH
Confidence 51 12 1467888888888754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.42 E-value=6.3e-07 Score=84.77 Aligned_cols=98 Identities=15% Similarity=0.216 Sum_probs=70.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHH----HHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLG----TKRLVE 365 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~ 365 (422)
..+++++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.| ++++++
T Consensus 50 ~~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (281)
T 3m1a_A 50 PDRAEAISLDVTDGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLP 123 (281)
T ss_dssp TTTEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCCceEEEeeCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999973 3344433 78999999997532 13456678999999 555566
Q ss_pred HHHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 366 LCHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 366 ~a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 124 ~~~~~~-~~~iv~~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 165 (281)
T 3m1a_A 124 QMRERG-SGSVVNISSFGGQL------------SFAGFSAYSATKAALEQLSEGL 165 (281)
T ss_dssp HHHHHT-CEEEEEECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CCEEEEEcCccccC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 556655 68999999976542 2334567888998888877654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.38 E-value=9.7e-07 Score=82.19 Aligned_cols=99 Identities=13% Similarity=0.094 Sum_probs=71.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.+++++.+|++|++ +++.+. .++|+|||+||... + .+.++..+++|+.|+.++++++..
T Consensus 62 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (260)
T 3awd_A 62 HDVSSVVMDVTNTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46899999999873 334443 37899999999654 1 133456789999999999998864
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||.++... .|..|...|+.+|...|.+++.+
T Consensus 136 ~~~~~~-~~~iv~~sS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~l 179 (260)
T 3awd_A 136 IMLEQK-QGVIVAIGSMSGLIV----------NRPQQQAAYNASKAGVHQYIRSL 179 (260)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC----------CSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcC-CCEEEEEecchhccc----------CCCCCccccHHHHHHHHHHHHHH
Confidence 23 579999999866432 12233467888999888887654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=80.79 Aligned_cols=106 Identities=10% Similarity=0.104 Sum_probs=73.5
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc---------CccEEEEcccccC-h-------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ---------NVSVVFHSAATVK-F-------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~---------~~d~ViH~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
..++.++.+|++|++ +++.+++ ++|+|||+||... . .+..+..+++|+.|+.+++++
T Consensus 50 ~~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 123 (250)
T 1yo6_A 50 DSRVHVLPLTVTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQK 123 (250)
T ss_dssp CTTEEEEECCTTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCceEEEEeecCCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHH
Confidence 357899999999863 3344433 7999999999765 1 234566799999999999988
Q ss_pred HHhc----------CC----CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM----------TH----LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~----------~~----~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... +. ..++|++||..+...... + ..+..+...|+.+|...|.+++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~---~~~~~~~~~Y~~sK~a~~~~~~~l 186 (250)
T 1yo6_A 124 LLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT--S---GSAQFPVLAYRMSKAAINMFGRTL 186 (250)
T ss_dssp THHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--S---TTSSSCBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc--c---ccccCCccHHHHHHHHHHHHHHHH
Confidence 7643 11 468999999866433211 1 122245667889999888877654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=9.8e-07 Score=83.03 Aligned_cols=98 Identities=15% Similarity=0.222 Sum_probs=71.8
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.+++.+++|+.|+.++++++..
T Consensus 65 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 138 (278)
T 2bgk_A 65 VISFVHCDVTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR 138 (278)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 7899999999873 3444433 79999999997532 134566799999999999999876
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..++.... .+...|+.+|...|.+++.+
T Consensus 139 ~~~~~~~~~iv~isS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l 181 (278)
T 2bgk_A 139 VMIPAKKGSIVFTASISSFTAGE-----------GVSHVYTATKHAVLGLTTSL 181 (278)
T ss_dssp HHGGGTCEEEEEECCGGGTCCCT-----------TSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCeEEEEeeccccCCCC-----------CCCcchHHHHHHHHHHHHHH
Confidence 3 1257999999987653311 23457888898888877654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=7.5e-07 Score=80.99 Aligned_cols=93 Identities=15% Similarity=0.093 Sum_probs=68.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
..+++++.+|++|+ ++++.+++++|+|||+||.. |+. ++++++++++.+ ++++|++||..
T Consensus 51 ~~~~~~~~~D~~d~------~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~ 110 (221)
T 3r6d_A 51 HERVTVIEGSFQNP------GXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRXN-IRRVIGVSMAG 110 (221)
T ss_dssp STTEEEEECCTTCH------HHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHTT-CCEEEEEEETT
T ss_pred CCceEEEECCCCCH------HHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhcC-CCeEEEEeece
Confidence 46789999999986 46778889999999999864 445 999999999876 88999999998
Q ss_pred cccCCCc-ccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDREE-VREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~~~-~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+++.... ..+.. ..+.. ..|..+|...|.+++.
T Consensus 111 ~~~~~~~~~~~~~-~~~~~--~~y~~~K~~~e~~~~~ 144 (221)
T 3r6d_A 111 LSGEFPVALEKWT-FDNLP--ISYVQGERQARNVLRE 144 (221)
T ss_dssp TTSCSCHHHHHHH-HHTSC--HHHHHHHHHHHHHHHH
T ss_pred ecCCCCccccccc-ccccc--cHHHHHHHHHHHHHHh
Confidence 7764321 11111 11111 2688889988888764
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=4.3e-07 Score=84.97 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=56.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+..+..+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 127 (276)
T 1wma_A 54 LSPRFHQLDIDDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 127 (276)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CeeEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence 46789999999863 3444433 79999999997532 2445667999999999999999875
Q ss_pred C-CCceEEEEeCCccc
Q psy16526 371 T-HLEALIHVSTAYCN 385 (422)
Q Consensus 371 ~-~~~r~v~~SS~~~~ 385 (422)
- +..++|++||..++
T Consensus 128 ~~~~g~iv~~sS~~~~ 143 (276)
T 1wma_A 128 IKPQGRVVNVSSIMSV 143 (276)
T ss_dssp EEEEEEEEEECCHHHH
T ss_pred hCCCCEEEEECChhhh
Confidence 2 12489999997554
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.9e-06 Score=81.44 Aligned_cols=99 Identities=15% Similarity=0.217 Sum_probs=71.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHH----HHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLG----TKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~ 366 (422)
.++.++.+|++|++ +++.++ .++|+|||+||.... .+.++..+++|+.| ++++++.
T Consensus 83 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 156 (279)
T 1xg5_A 83 GTLIPYRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 156 (279)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 333333 379999999996532 23456679999999 7778888
Q ss_pred HHhcCCC--ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEMTHL--EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~~~~--~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.+ . .++|++||..+++. .|..+...|+.+|...|.+.+.+
T Consensus 157 ~~~~~-~~~g~iv~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~l 201 (279)
T 1xg5_A 157 MKERN-VDDGHIININSMSGHRV----------LPLSVTHFYSATKYAVTALTEGL 201 (279)
T ss_dssp HHHTT-CCSCEEEEECCGGGTSC----------CSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCCceEEEEcChhhccc----------CCCCCCchhHHHHHHHHHHHHHH
Confidence 87754 4 79999999866422 23445678889999888776654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.5e-06 Score=80.19 Aligned_cols=97 Identities=18% Similarity=0.279 Sum_probs=70.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (244)
T 2bd0_A 58 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeeEEEecCCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57889999999873 3344332 79999999997542 134566789999999999998853
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..++. |..+...|+.+|...|.+.+.+
T Consensus 132 ~~~~~-~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 172 (244)
T 2bd0_A 132 MERQH-SGHIFFITSVAATK------------AFRHSSIYCMSKFGQRGLVETM 172 (244)
T ss_dssp HHHHT-CEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCC-CCEEEEEecchhcC------------CCCCCchhHHHHHHHHHHHHHH
Confidence 23 57999999986653 2224567888898888777543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.7e-06 Score=79.78 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=70.5
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc----C
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM----T 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~ 371 (422)
+++++.+|++|+ ++++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... +
T Consensus 53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 126 (244)
T 1cyd_A 53 GIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG 126 (244)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEecCCCH------HHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 567789999986 34555554 47999999996542 1345567899999999999988753 2
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...++|++||..++.. ..+...|+.+|...|.+++.+
T Consensus 127 ~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 163 (244)
T 1cyd_A 127 VPGSIVNVSSMVAHVT------------FPNLITYSSTKGAMTMLTKAM 163 (244)
T ss_dssp CCEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcchhhcCC------------CCCcchhHHHHHHHHHHHHHH
Confidence 1478999999866532 123457888999888887654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.6e-06 Score=81.75 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=70.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------h---hhHHHHHHhhHHH----HHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------D---EALKLSVTINMLG----TKRLV 364 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------~---~~~~~~~~~Nv~g----t~~ll 364 (422)
.++.++.+|++|++ +++.++ .++|+|||+||.... . +.++..+++|+.| +++++
T Consensus 83 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 156 (279)
T 3ctm_A 83 VHSKAYKCNISDPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIG 156 (279)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CcceEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999863 333333 258999999997543 2 2345568999999 66777
Q ss_pred HHHHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+++.+ .+++|++||..+... .+..+...|+.+|...|.+++.+
T Consensus 157 ~~~~~~~-~~~iv~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~l 201 (279)
T 3ctm_A 157 KIFKKNG-KGSLIITSSISGKIV----------NIPQLQAPYNTAKAACTHLAKSL 201 (279)
T ss_dssp HHHHHHT-CCEEEEECCCTTSCC-------------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC-CCeEEEECchHhccC----------CCCCCcccHHHHHHHHHHHHHHH
Confidence 7777655 689999999865321 12335678999999988887754
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.30 E-value=4.2e-07 Score=86.59 Aligned_cols=93 Identities=9% Similarity=-0.052 Sum_probs=68.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+|+..... ..+.|+.++.+++++|++.+ +++|||+||..+
T Consensus 51 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~ 118 (299)
T 2wm3_A 51 QGAEVVQGDQDDQ------VIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRLG-LHYVVYSGLENI 118 (299)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCH
T ss_pred CCCEEEEecCCCH------HHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHcC-CCEEEEEcCccc
Confidence 4688999999986 46778889999999999853211 13568999999999999987 899999887655
Q ss_pred ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++. .| ..+.. .|..+|...|+++++
T Consensus 119 ~~~----~~---~~~~~---~y~~sK~~~e~~~~~ 143 (299)
T 2wm3_A 119 KKL----TA---GRLAA---AHFDGKGEVEEYFRD 143 (299)
T ss_dssp HHH----TT---TSCCC---HHHHHHHHHHHHHHH
T ss_pred ccc----CC---CcccC---chhhHHHHHHHHHHH
Confidence 532 11 11223 466788888888764
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.5e-06 Score=79.72 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=70.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh--------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK--------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~--------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 131 (260)
T 2ae2_A 58 FKVEASVCDLSSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 131 (260)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999873 334333 479999999997532 13455678999999999999984
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 132 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 173 (260)
T 2ae2_A 132 FLKASE-RGNVVFISSVSGALA------------VPYEAVYGATKGAMDQLTRCL 173 (260)
T ss_dssp HHHHTS-SEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CcEEEEEcchhhccC------------CCCcchHHHHHHHHHHHHHHH
Confidence 333 679999999865421 123457888888888777654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=80.09 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=71.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc---------CccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ---------NVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~---------~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||... + .+..+..+++|+.|+.++++++
T Consensus 72 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 145 (267)
T 1sny_A 72 SNIHILEIDLRNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 145 (267)
T ss_dssp TTEEEEECCTTCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEEEecCCChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence 47899999999974 2333333 7999999999754 1 2345567899999999999998
Q ss_pred Hhc----------CC----CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEM----------TH----LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~----------~~----~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
... +. ..++|++||..++.... +..+...|+.+|...|.+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~l 203 (267)
T 1sny_A 146 LPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN---------TDGGMYAYRTSKSALNAATKSL 203 (267)
T ss_dssp HHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC---------CSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccccccCCCceEEEEecccccccCC---------CCCCchHHHHHHHHHHHHHHHH
Confidence 653 10 36899999986643211 2234556888898888877654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.6e-06 Score=81.17 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=63.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh--------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK--------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC-- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~--------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a-- 367 (422)
.++.++.+|+++++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 136 (266)
T 1xq1_A 63 FQVTGSVCDASLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 136 (266)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEECCCCCHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999863 333333 578999999997532 1345567899999999999998
Q ss_pred --HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 --HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 --~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ .+++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 137 ~~~~~~-~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 178 (266)
T 1xq1_A 137 LLKASG-CGNIIFMSSIAGVVS------------ASVGSIYSATKGALNQLARNL 178 (266)
T ss_dssp HHHHHS-SCEEEEEC----------------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CcEEEEEccchhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 3444 689999999865432 112346778888877776654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-06 Score=80.03 Aligned_cols=98 Identities=11% Similarity=0.113 Sum_probs=69.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.+++.+++|+.|+.++++++.+.
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 124 (244)
T 1edo_A 51 GQAITFGGDVSKEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999863 3444433 78999999997542 1345567899999999999988753
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... .+...|+.+|...|.+.+.+
T Consensus 125 ~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 165 (244)
T 1edo_A 125 MMKKRKGRIINIASVVGLIGN------------IGQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECChhhcCCC------------CCCccchhhHHHHHHHHHHH
Confidence 126799999998553211 12456778888777666543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.9e-06 Score=80.39 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=70.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------------hhhHHHHHHhhHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------------DEALKLSVTINMLGTKRLV 364 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------------~~~~~~~~~~Nv~gt~~ll 364 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.+++
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~ 131 (265)
T 2o23_A 58 NNCVFAPADVTSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 131 (265)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHH
Confidence 46889999999873 3444443 79999999997532 2345667899999999999
Q ss_pred HHHHhc---C------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHEM---T------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~~---~------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++... . +..++|++||.+++.. ..+...|+.+|...|.+.+.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 184 (265)
T 2o23_A 132 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------------QVGQAAYSASKGGIVGMTLPI 184 (265)
T ss_dssp HHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCCcEEEEeCChhhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 998764 0 2578999999866532 123457888888777766544
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.2e-06 Score=79.21 Aligned_cols=99 Identities=13% Similarity=0.212 Sum_probs=70.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 68 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 141 (260)
T 3un1_A 68 PDIHTVAGDISKPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAE 141 (260)
T ss_dssp TTEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 47899999999873 3344433 79999999997532 1345667899999999999988
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+... .+..+...|+.+|...|.+.+.+
T Consensus 142 m~~~~-~g~iv~isS~~~~~~----------~~~~~~~~Y~~sKaa~~~l~~~l 184 (260)
T 3un1_A 142 MLKQG-SGHIVSITTSLVDQP----------MVGMPSALASLTKGGLNAVTRSL 184 (260)
T ss_dssp HHHTT-CEEEEEECCTTTTSC----------BTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEEechhhccC----------CCCCccHHHHHHHHHHHHHHHHH
Confidence 3444 679999999765321 12234457788888777776654
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=78.27 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=70.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc----C
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM----T 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~ 371 (422)
+++++.+|++|+ ++++++++ ++|+|||+||.... .+.++..+++|+.|+.++++++... +
T Consensus 53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 126 (244)
T 3d3w_A 53 GIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG 126 (244)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCH------HHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 457789999987 34555554 58999999997542 1345667999999999999988753 2
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...++|++||..++.. ..+...|+.+|...|.+++.+
T Consensus 127 ~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 163 (244)
T 3d3w_A 127 VPGAIVNVSSQCSQRA------------VTNHSVYCSTKGALDMLTKVM 163 (244)
T ss_dssp CCEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCchhhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 1478999999765421 224568999999988887654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.9e-06 Score=79.94 Aligned_cols=97 Identities=11% Similarity=0.112 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 54 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (246)
T 3osu_A 54 VDSFAIQANVADAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ 127 (246)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56889999999873 3344433 78999999997631 2345667999999999999998
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 168 (246)
T 3osu_A 128 MLRQR-SGAIINLSSVVGAVG------------NPGQANYVATKAGVIGLTKSA 168 (246)
T ss_dssp HHHHT-CEEEEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCEEEEEcchhhcCC------------CCCChHHHHHHHHHHHHHHHH
Confidence 4444 579999999765421 113457888888777766544
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.7e-06 Score=77.91 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=66.4
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC---- 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a---- 367 (422)
++.++.+|++|++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 124 (234)
T 2ehd_A 51 GALPLPGDVREEG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL 124 (234)
T ss_dssp TCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6788999999863 333332 378999999996532 1345567899999998666554
Q ss_pred HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ .+++|++||..++. |..+...|+.+|...|.+.+.+
T Consensus 125 ~~~~-~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 164 (234)
T 2ehd_A 125 LRRG-GGTIVNVGSLAGKN------------PFKGGAAYNASKFGLLGLAGAA 164 (234)
T ss_dssp HTTT-CEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HhCC-CcEEEEECCchhcC------------CCCCCchhhHHHHHHHHHHHHH
Confidence 4444 68999999986542 1223457888888777766543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=81.20 Aligned_cols=105 Identities=12% Similarity=0.092 Sum_probs=72.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 64 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 137 (265)
T 1h5q_A 64 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 137 (265)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH
Confidence 46889999999863 333332 358999999997542 1345566899999999999998653
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+..... .+ ..+..+...|+.+|...|.+++.+
T Consensus 138 ~~~~~~~~~iv~~sS~~~~~~~~--~~---~~~~~~~~~Y~~sK~a~~~~~~~l 186 (265)
T 1h5q_A 138 WLQKQQKGSIVVTSSMSSQIINQ--SS---LNGSLTQVFYNSSKAACSNLVKGL 186 (265)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCE--EE---TTEECSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEeCCchhhcccc--cc---ccccccccccHHHHHHHHHHHHHH
Confidence 2237899999986543211 11 123345678889999888877654
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.7e-06 Score=78.64 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=69.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh----------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF----------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 125 (250)
T 2cfc_A 52 DKVLRVRADVADEG------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAV 125 (250)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 46899999999873 3444433 79999999987532 1345567899999998877766
Q ss_pred Hh----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HE----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+ .+++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 126 ~~~~~~~~-~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 169 (250)
T 2cfc_A 126 LPHMLLQG-AGVIVNIASVASLVA------------FPGRSAYTTSKGAVLQLTKSV 169 (250)
T ss_dssp HHHHHHHT-CEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCC-CCEEEEECChhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 43 34 689999999865432 123567888898888877654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.5e-06 Score=80.13 Aligned_cols=97 Identities=10% Similarity=0.034 Sum_probs=67.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.+++.+++|+.|+.++++++.
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (248)
T 2pnf_A 57 VKAHGVEMNLLSEE------SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRK 130 (248)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46889999999863 3444443 79999999997542 13455679999999977766553
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..+.... .+...|+.+|...|.+.+.+
T Consensus 131 ~~~~~-~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 171 (248)
T 2pnf_A 131 MIKQR-WGRIVNISSVVGFTGN------------VGQVNYSTTKAGLIGFTKSL 171 (248)
T ss_dssp HHHHT-CEEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CcEEEEEccHHhcCCC------------CCCchHHHHHHHHHHHHHHH
Confidence 334 6899999997543211 12356778888777776544
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=2.6e-06 Score=79.71 Aligned_cols=96 Identities=13% Similarity=0.116 Sum_probs=67.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC---- 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a---- 367 (422)
++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 54 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 127 (260)
T 1nff_A 54 AARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPM 127 (260)
T ss_dssp GEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4788999999873 3444443 79999999997542 2345667999999997666654
Q ss_pred HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 167 (260)
T 1nff_A 128 KEAG-RGSIINISSIEGLAG------------TVACHGYTATKFAVRGLTKST 167 (260)
T ss_dssp HHHT-CEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HhcC-CCEEEEEeehhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 3444 679999999866432 113457888888888776654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.24 E-value=1e-06 Score=78.84 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=67.6
Q ss_pred EEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhcC-CCceEE
Q psy16526 309 PILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEMT-HLEALI 377 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v 377 (422)
.+.+|++++ ++++.+++ ++|+|||+||..... +.++..+++|+.|+.++++++.+.- +-.++|
T Consensus 38 ~~~~D~~~~------~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv 111 (202)
T 3d7l_A 38 DVTVDITNI------DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFT 111 (202)
T ss_dssp SEECCTTCH------HHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEE
T ss_pred ceeeecCCH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEE
Confidence 467899886 34455544 489999999965321 3345668999999999999998751 016899
Q ss_pred EEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 378 HVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 378 ~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
++||.+++. |..+...|+.+|...|.+++.+.
T Consensus 112 ~~sS~~~~~------------~~~~~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 112 LTTGIMMED------------PIVQGASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHT
T ss_pred EEcchhhcC------------CCCccHHHHHHHHHHHHHHHHHH
Confidence 999976542 22345688899999888887653
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.24 E-value=3.1e-06 Score=80.02 Aligned_cols=65 Identities=9% Similarity=0.018 Sum_probs=55.5
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
..+++++.+|++|+ +++..+++++|+|||+|+..... ..|+.++++++++|++.+ +++|||+||.
T Consensus 43 ~~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~ 107 (289)
T 3e48_A 43 RGKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQSG-VAHIIFIGYY 107 (289)
T ss_dssp BTTBEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHTT-CCEEEEEEES
T ss_pred hCCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHcC-CCEEEEEccc
Confidence 36789999999987 46788889999999999976532 248999999999999987 9999999994
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=3.7e-06 Score=78.31 Aligned_cols=98 Identities=15% Similarity=0.078 Sum_probs=69.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.+++.+++|+.|+.++++++...
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (261)
T 1gee_A 57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999863 3344333 78999999997542 1345567899999999998887642
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 131 ~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 172 (261)
T 1gee_A 131 FVENDIKGTVINMSSVHEKI------------PWPLFVHYAASKGGMKLMTETL 172 (261)
T ss_dssp HHHTTCCCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCEEEEeCCHHhcC------------CCCCccHHHHHHHHHHHHHHHH
Confidence 2146999999975431 2334567888887777766544
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=79.15 Aligned_cols=97 Identities=9% Similarity=0.100 Sum_probs=61.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||..... +.+++.+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 128 (247)
T 2hq1_A 55 INVVVAKGDVKNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128 (247)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999873 3344433 799999999976421 23356689999999998888764
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.... .+...|+.+|...|.+.+.+
T Consensus 129 ~~~~~-~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 169 (247)
T 2hq1_A 129 MLKQK-SGKIINITSIAGIIGN------------AGQANYAASKAGLIGFTKSI 169 (247)
T ss_dssp HHHHT-CEEEEEECC---------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CcEEEEEcChhhccCC------------CCCcHhHHHHHHHHHHHHHH
Confidence 33 6799999997432110 12457888888888777654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=3.7e-06 Score=78.63 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=69.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 130 (263)
T 3ai3_A 57 VRVLEVAVDVATPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG 130 (263)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 3344433 79999999997532 234566789999999999988753
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..++... .+...|+.+|...|.+.+.+
T Consensus 131 ~~~~~-~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 171 (263)
T 3ai3_A 131 MRARG-GGAIIHNASICAVQPL------------WYEPIYNVTKAALMMFSKTL 171 (263)
T ss_dssp HHHHT-CEEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEECchhhcCCC------------CCcchHHHHHHHHHHHHHHH
Confidence 33 5799999998765321 23457888888877776654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=4.1e-06 Score=77.57 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=68.9
Q ss_pred cE-EEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH---
Q psy16526 306 KI-KPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH--- 368 (422)
Q Consensus 306 ~v-~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~--- 368 (422)
++ .++.+|++|++ +++.+. .++|+|||+||.... .+..+..+++|+.|+.++++++.
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 131 (254)
T 2wsb_A 58 AVAARIVADVTDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAM 131 (254)
T ss_dssp GEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cceeEEEEecCCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45 88999999873 333333 478999999997542 13445678999999877777653
Q ss_pred -hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 -EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 -~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .+++|++||..++.. .|..|...|+.+|...|.+.+.+
T Consensus 132 ~~~~-~~~iv~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~~ 173 (254)
T 2wsb_A 132 VARG-AGAIVNLGSMSGTIV----------NRPQFASSYMASKGAVHQLTRAL 173 (254)
T ss_dssp HHHT-CEEEEEECCGGGTSC----------CSSSCBHHHHHHHHHHHHHHHHH
T ss_pred HhcC-CcEEEEEecchhccC----------CCCCcchHHHHHHHHHHHHHHHH
Confidence 334 689999999865432 13334567888898888877654
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2.8e-06 Score=81.04 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=70.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 76 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 149 (302)
T 1w6u_A 76 NKVHAIQCDVRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ 149 (302)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999863 334333 256999999996432 1345667999999999998888542
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||.++... ..+...|+.+|...|.+.+.+
T Consensus 150 ~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 191 (302)
T 1w6u_A 150 LIKAQKGAAFLSITTIYAETG------------SGFVVPSASAKAGVEAMSKSL 191 (302)
T ss_dssp HHHTTCCEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEcccccccC------------CCCcchhHHHHHHHHHHHHHH
Confidence 22579999999876532 224567888898888877654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.5e-06 Score=79.40 Aligned_cols=97 Identities=10% Similarity=0.123 Sum_probs=68.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.+++++
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 131 (278)
T 1spx_A 58 QNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK 131 (278)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceeEEecccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 46889999999873 3444443 89999999997531 233456789999999999999
Q ss_pred HHhc---CCCceEEEEeCCcc-ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM---THLEALIHVSTAYC-NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~---~~~~r~v~~SS~~~-~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... .+ .++|++||..+ ... ..+...|+.+|...|.+.+.+
T Consensus 132 ~~~~~~~~~-g~iv~isS~~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 176 (278)
T 1spx_A 132 AVPHLSSTK-GEIVNISSIASGLHA------------TPDFPYYSIAKAAIDQYTRNT 176 (278)
T ss_dssp HHHHHHHHT-CEEEEECCTTSSSSC------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcC-CeEEEEecccccccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 8763 12 69999999865 321 123457888888888776654
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.5e-06 Score=79.99 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=70.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 71 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 71 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999873 3444443 79999999997542 1344567899999999999998764
Q ss_pred C-CCceEEEEeCCccc-cCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T-HLEALIHVSTAYCN-CDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~-~~~r~v~~SS~~~~-g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- .-.++|++||..++ +. ..+...|+.+|...|.+++.+
T Consensus 145 ~~~~~~iv~~sS~~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 184 (274)
T 1ja9_A 145 CRRGGRIILTSSIAAVMTG------------IPNHALYAGSKAAVEGFCRAF 184 (274)
T ss_dssp EEEEEEEEEECCGGGTCCS------------CCSCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCEEEEEcChHhccCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 1 01689999998665 22 112457888999888887654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.9e-06 Score=82.37 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=67.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.||++|+ +++..+++++|+|||+|+.... ..|+.++.+++++|++.+++++||+ |.|+
T Consensus 55 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~l~~aa~~~g~v~~~v~--S~~g 118 (313)
T 1qyd_A 55 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEAGNIKRFLP--SEFG 118 (313)
T ss_dssp TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHSCCCSEEEC--SCCS
T ss_pred CCeEEEeCCCCCH------HHHHHHHhCCCEEEECCccccc--------hhhHHHHHHHHHHHHhcCCCceEEe--cCCc
Confidence 5689999999986 4677888999999999997643 2388999999999999755899986 4443
Q ss_pred ccCCCcccccccCCCCCH-HHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDP-QKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p-~~~y~~~K~~~E~~~~~ 419 (422)
..... . ..|..| ...| .+|...|+++++
T Consensus 119 ~~~~~-~-----~~~~~p~~~~y-~sK~~~e~~~~~ 147 (313)
T 1qyd_A 119 MDPDI-M-----EHALQPGSITF-IDKRKVRRAIEA 147 (313)
T ss_dssp SCTTS-C-----CCCCSSTTHHH-HHHHHHHHHHHH
T ss_pred CCccc-c-----ccCCCCCcchH-HHHHHHHHHHHh
Confidence 21111 1 123333 4567 889999988865
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.19 E-value=6.3e-06 Score=77.21 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=70.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 133 (262)
T 3pk0_A 60 GKVIGVQTDVSDRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA 133 (262)
T ss_dssp SCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999973 334433 379999999997531 1345567999999999999988764
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||..+.. .+..+...|+.+|...|.+.+.+
T Consensus 134 m~~~~-~g~iv~isS~~~~~-----------~~~~~~~~Y~asK~a~~~l~~~l 175 (262)
T 3pk0_A 134 LIASG-SGRVVLTSSITGPI-----------TGYPGWSHYGATKAAQLGFMRTA 175 (262)
T ss_dssp HHHHS-SCEEEEECCSBTTT-----------BCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CcEEEEEechhhcc-----------CCCCCChhhHHHHHHHHHHHHHH
Confidence 4 57999999976421 11224567888888887776654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.9e-06 Score=80.37 Aligned_cols=98 Identities=15% Similarity=0.130 Sum_probs=69.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------Cc-cEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NV-SVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~-d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+++ ++ |+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 136 (264)
T 2pd6_A 63 GNHAAFQADVSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQ 136 (264)
T ss_dssp -CCEEEECCTTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cceEEEEecCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 46789999999863 3344433 44 999999997542 234566799999999999999876
Q ss_pred c----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +...++|++||.++... ..+...|+.+|...|.+.+.+
T Consensus 137 ~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 179 (264)
T 2pd6_A 137 ALVSNGCRGSIINISSIVGKVG------------NVGQTNYAASKAGVIGLTQTA 179 (264)
T ss_dssp HHHHHTCCEEEEEECCTHHHHC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCceEEEECChhhccC------------CCCChhhHHHHHHHHHHHHHH
Confidence 3 11368999999865422 123567888898887776654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.19 E-value=5.7e-06 Score=76.06 Aligned_cols=89 Identities=15% Similarity=0.134 Sum_probs=59.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.+|++|+ ++++.+++++|+|||+|+..... .+++++++++++.+ +++||++||..
T Consensus 66 ~~~~~~~~~Dl~d~------~~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~~~-~~~iV~iSS~~ 127 (236)
T 3qvo_A 66 PTNSQIIMGDVLNH------AALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKACD-VKRLIFVLSLG 127 (236)
T ss_dssp CTTEEEEECCTTCH------HHHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHHTT-CCEEEEECCCC
T ss_pred cCCcEEEEecCCCH------HHHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHHcC-CCEEEEEecce
Confidence 35789999999986 46788889999999999864321 35779999999987 89999999988
Q ss_pred cccCCCc-ccccccCCCCCHHHHHHHHh
Q psy16526 384 CNCDREE-VREIIYSPPYDPQKIIETME 410 (422)
Q Consensus 384 ~~g~~~~-~~E~~~~~p~~p~~~y~~~K 410 (422)
+++.... ..+.....+..+...|+.+|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (236)
T 3qvo_A 128 IYDEVPGKFVEWNNAVIGEPLKPFRRAA 155 (236)
T ss_dssp C----------------CGGGHHHHHHH
T ss_pred ecCCCCcccccchhhcccchHHHHHHHH
Confidence 7765321 11111123445666676664
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.8e-06 Score=78.07 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=69.0
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----H
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC----H 368 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~ 368 (422)
+.++.+|++|++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++ +
T Consensus 48 ~~~~~~D~~d~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 121 (250)
T 2fwm_X 48 FATEVMDVADAA------QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR 121 (250)
T ss_dssp SEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 778899999873 3444433 78999999997542 1345667999999999999988 3
Q ss_pred hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 122 ~~~-~g~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 160 (250)
T 2fwm_X 122 RQR-GGAIVTVASDAAHT------------PRIGMSAYGASKAALKSLALSV 160 (250)
T ss_dssp HHT-CCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred hcC-CCEEEEECchhhCC------------CCCCCchHHHHHHHHHHHHHHH
Confidence 333 57999999986542 2223567888888888776654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=4e-06 Score=77.72 Aligned_cols=99 Identities=9% Similarity=0.057 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccc-cC---hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAAT-VK---FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~-~~---~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||. .. +. +.++..+++|+.|+.++++++..
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (258)
T 3afn_B 57 GDAAFFAADLATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP 130 (258)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 47889999999873 4444443 79999999996 32 11 23556789999999999987753
Q ss_pred c--------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M--------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~--------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +...++|++||.++... +..+...|+.+|...|.+.+.+
T Consensus 131 ~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~~ 178 (258)
T 3afn_B 131 HLAAAAKASGQTSAVISTGSIAGHTG-----------GGPGAGLYGAAKAFLHNVHKNW 178 (258)
T ss_dssp HHHHHHHHHTSCEEEEEECCTHHHHC-----------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCcEEEEecchhhccC-----------CCCCchHHHHHHHHHHHHHHHH
Confidence 1 11268999999876531 1124567888898888877654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4e-06 Score=78.36 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=70.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (259)
T 4e6p_A 54 PAAYAVQMDVTRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ 127 (259)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46789999999873 3344433 79999999997542 1345667899999999999988643
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 169 (259)
T 4e6p_A 128 MIAQGRGGKIINMASQAGRRG------------EALVAIYCATKAAVISLTQSA 169 (259)
T ss_dssp HHHHTSCEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEECChhhccC------------CCCChHHHHHHHHHHHHHHHH
Confidence 11358999999865421 223467888888888777654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.8e-06 Score=81.47 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=70.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +++++++ ++|+|||+||.... .+..+..+++|+.|+.++++++
T Consensus 59 ~~~~~~~~Dvtd~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~ 132 (324)
T 3u9l_A 59 VDLRTLELDVQSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPH 132 (324)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999873 3444443 79999999996531 1345567899999999999998
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+.+.. ....+.|..+|...|.+.+.+
T Consensus 133 m~~~~-~g~iV~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~l 174 (324)
T 3u9l_A 133 MRRQK-HGLLIWISSSSSAGGT-----------PPYLAPYFAAKAAMDAIAVQY 174 (324)
T ss_dssp HHHHT-CEEEEEECCGGGTSCC-----------CSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEEecchhccCC-----------CCcchhHHHHHHHHHHHHHHH
Confidence 4444 6799999998665221 111356888888888777654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.17 E-value=2.6e-06 Score=80.57 Aligned_cols=108 Identities=12% Similarity=0.015 Sum_probs=75.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-----hhhHHHHHHhhHHHHHHHHHHHHhcC
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-----DEALKLSVTINMLGTKRLVELCHEMT 371 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~ 371 (422)
..++.++.+|++|++ ++++++ .++|++||+||.... .+.++..+++|+.|+.++++++...-
T Consensus 70 ~~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 143 (287)
T 3pxx_A 70 GRKAYTAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYL 143 (287)
T ss_dssp TSCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGC
T ss_pred CCceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHh
Confidence 357899999999873 333333 378999999998642 24566779999999999999998642
Q ss_pred -CCceEEEEeCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 -HLEALIHVSTAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 -~~~r~v~~SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+-.++|++||..+... ..+..| ..+..+...|+.+|...+.+.+.+
T Consensus 144 ~~~g~iv~isS~~~~~~~~~~~~~~---~~~~~~~~~Y~asK~a~~~~~~~l 192 (287)
T 3pxx_A 144 TSGASIITTGSVAGLIAAAQPPGAG---GPQGPGGAGYSYAKQLVDSYTLQL 192 (287)
T ss_dssp CTTCEEEEECCHHHHHHHHCCC--------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCcEEEEeccchhccccccccccc---ccCCCccchHHHHHHHHHHHHHHH
Confidence 2358999999865432 222233 234456788999999888877654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=4.6e-06 Score=78.53 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++.++ .++|+|||+||.... .+..+..+++|+.|+.++++++.
T Consensus 80 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 153 (272)
T 1yb1_A 80 AKVHTFVVDCSNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 153 (272)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEeeCCCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 47899999999863 333333 378999999997542 13345678999999888877764
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 154 ~~~~~-~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~l 194 (272)
T 1yb1_A 154 MTKNN-HGHIVTVASAAGHVS------------VPFLLAYCSSKFAAVGFHKTL 194 (272)
T ss_dssp HHHTT-CEEEEEECCCC-CCC------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEEechhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 334 689999999866432 234678999999888877654
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=6.2e-06 Score=76.98 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|++ +.+.+. .++|++||+||... + .+.++..+++|+.|+.++++++.
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 136 (260)
T 2zat_A 63 LSVTGTVCHVGKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP 136 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46888999999863 333333 37999999999643 1 13455678999999999998875
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 137 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 178 (260)
T 2zat_A 137 EMEKRG-GGSVLIVSSVGAYHP------------FPNLGPYNVSKTALLGLTKNL 178 (260)
T ss_dssp HHHHTT-CEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-CCEEEEEechhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 333 679999999866532 223567888888887777654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.16 E-value=5.6e-06 Score=77.09 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=67.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++.+++
T Consensus 51 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 124 (255)
T 2q2v_A 51 VKAVHHPADLSDVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124 (255)
T ss_dssp CCEEEECCCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46888999999873 4444443 79999999997542 2345667999999887776665
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+.... .+...|+.+|...+.+.+.+
T Consensus 125 ~~~~~-~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 165 (255)
T 2q2v_A 125 MRARN-WGRIINIASVHGLVGS------------TGKAAYVAAKHGVVGLTKVV 165 (255)
T ss_dssp HHHTT-CEEEEEECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEEcCchhccCC------------CCchhHHHHHHHHHHHHHHH
Confidence 4444 6899999998664321 12456888888777766543
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=5e-06 Score=78.30 Aligned_cols=102 Identities=8% Similarity=-0.032 Sum_probs=70.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh------------------hhHHHHHHhhHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD------------------EALKLSVTINMLG 359 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~------------------~~~~~~~~~Nv~g 359 (422)
.++.++.+|++|+... .++++.+. .++|++||+||..... +.++..+++|+.|
T Consensus 62 ~~~~~~~~Dl~~~~~~--~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 139 (276)
T 1mxh_A 62 GSAVLCKGDLSLSSSL--LDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVA 139 (276)
T ss_dssp TCEEEEECCCSSSTTH--HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHH
T ss_pred CceEEEeccCCCcccc--HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHH
Confidence 4688999999987210 01223332 3789999999975321 3455679999999
Q ss_pred HHHHHHHHHhcC--CC------ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 360 TKRLVELCHEMT--HL------EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 360 t~~ll~~a~~~~--~~------~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.++++++...- +. .++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 140 ~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 196 (276)
T 1mxh_A 140 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP------------LPGFCVYTMAKHALGGLTRAA 196 (276)
T ss_dssp HHHHHHHHHHTC-------CCCEEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCC------------CCCCeehHHHHHHHHHHHHHH
Confidence 999999998731 13 68999999866421 223457888888887776654
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=6.2e-06 Score=76.65 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=69.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|+ ++++.+.+ ++|++||+||... + .+.++..+++|+.|+.++++++.
T Consensus 46 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 119 (248)
T 3asu_A 46 DNLYIAQLDVRNR------AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 (248)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4688999999987 34455443 6899999999752 1 13455679999999999998886
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 120 ~m~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 161 (248)
T 3asu_A 120 GMVERN-HGHIINIGSTAGSW------------PYAGGNVYGATKAFVRQFSLNL 161 (248)
T ss_dssp HHHHHT-CCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CceEEEEccchhcc------------CCCCCchHHHHHHHHHHHHHHH
Confidence 333 57999999986542 1223467888888888776654
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.5e-06 Score=78.28 Aligned_cols=99 Identities=15% Similarity=0.105 Sum_probs=70.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEcccccChh-----------hhHHHHHHhhHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATVKFD-----------EALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~~~~-----------~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.+++.++.+|++|++ +++++++ ++|+|||+||..... +.+++.+++|+.|+.+++++
T Consensus 38 ~~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 111 (242)
T 1uay_A 38 GEDLIYVEGDVTREE------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111 (242)
T ss_dssp SSSSEEEECCTTCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccceEEEeCCCCCHH------HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHH
Confidence 355688999999873 4445444 789999999975421 15667789999999999999
Q ss_pred HHhcC---------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEMT---------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~~---------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...- ...++|++||..++... .+...|+.+|...|.+.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 162 (242)
T 1uay_A 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------------IGQAAYAASKGGVVALTLPA 162 (242)
T ss_dssp HHHHHTTCCCCTTSCSEEEEEECCTHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCeEEEEeCChhhccCC------------CCCchhhHHHHHHHHHHHHH
Confidence 87531 12389999998765321 13457788887777766543
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=5.7e-06 Score=78.35 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=70.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+ ..++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 79 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (283)
T 1g0o_A 79 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152 (283)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999863 23332 2378999999997642 2345667999999999999999875
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... ..+...|+.+|...|.+.+.+
T Consensus 153 ~~~~g~iv~isS~~~~~~~-----------~~~~~~Y~asK~a~~~~~~~l 192 (283)
T 1g0o_A 153 LEIGGRLILMGSITGQAKA-----------VPKHAVYSGSKGAIETFARCM 192 (283)
T ss_dssp SCTTCEEEEECCGGGTCSS-----------CSSCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEechhhccCC-----------CCCCcchHHHHHHHHHHHHHH
Confidence 225799999997653211 112467888888887776654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.16 E-value=6.9e-06 Score=76.72 Aligned_cols=100 Identities=13% Similarity=0.195 Sum_probs=70.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccc--cC---h----hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAAT--VK---F----DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~--~~---~----~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
..++.++.+|++|++ +++.+. .++|+|||+||. .. + .+.++..+++|+.|+.++++++
T Consensus 56 ~~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 129 (264)
T 3i4f_A 56 EERLQFVQADVTKKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV 129 (264)
T ss_dssp GGGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHH
Confidence 357899999999973 334433 378999999993 21 1 1345667999999999999998
Q ss_pred ----HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 ----HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ----~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||....+. .+..+...|+.+|...|.+.+.+
T Consensus 130 ~~~~~~~~-~g~iv~iss~~~~~~----------~~~~~~~~Y~asKaa~~~~~~~l 175 (264)
T 3i4f_A 130 VPVMRKQN-FGRIINYGFQGADSA----------PGWIYRSAFAAAKVGLVSLTKTV 175 (264)
T ss_dssp HHHHHHHT-CEEEEEECCTTGGGC----------CCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CCeEEEEeechhccc----------CCCCCCchhHHHHHHHHHHHHHH
Confidence 4444 579999998743311 12234567888888877776654
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.15 E-value=8.2e-06 Score=76.33 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=71.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 72 ~~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 145 (266)
T 3o38_A 72 LGRVEAVVCDVTSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALR 145 (266)
T ss_dssp SSCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357999999999873 333333 368999999997542 134556799999999999999875
Q ss_pred c----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 146 ~~~~~~~~~~iv~~sS~~~~~------------~~~~~~~Y~~sKaa~~~~~~~l 188 (266)
T 3o38_A 146 YFRGVDHGGVIVNNASVLGWR------------AQHSQSHYAAAKAGVMALTRCS 188 (266)
T ss_dssp HHHTSSCCEEEEEECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCeEEEEeCCHHHcC------------CCCCCchHHHHHHHHHHHHHHH
Confidence 3 1256899999976542 2234567888888888777654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=5.4e-06 Score=77.42 Aligned_cols=97 Identities=9% Similarity=0.032 Sum_probs=69.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (260)
T 1x1t_A 55 VKVLYDGADLSKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp SCEEEECCCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999873 334433 378999999997541 134566799999999999998853
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 129 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 169 (260)
T 1x1t_A 129 MKKQG-FGRIINIASAHGLVA------------SANKSAYVAAKHGVVGFTKVT 169 (260)
T ss_dssp HHHHT-CEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEECcHHhCcC------------CCCCchHHHHHHHHHHHHHHH
Confidence 23 579999999865422 123457888888877776654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.15 E-value=7.2e-06 Score=76.52 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=70.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------hhhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------DEALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 61 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 134 (256)
T 3gaf_A 61 GKAIGLECNVTDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHM 134 (256)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57889999999973 333333 378999999997542 134566799999999999999843
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 135 ~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 174 (256)
T 3gaf_A 135 QKAG-GGAILNISSMAGEN------------TNVRMASYGSSKAAVNHLTRNI 174 (256)
T ss_dssp HHTT-CEEEEEECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcC-CcEEEEEcCHHHcC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 33 57999999986542 2223567888888877776654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.15 E-value=5.6e-06 Score=77.72 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=70.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 46 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 119 (264)
T 2dtx_A 46 AKYDHIECDVTNPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119 (264)
T ss_dssp CSSEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999873 3344332 79999999997542 1345667999999999999888642
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 120 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 160 (264)
T 2dtx_A 120 MIRSRDPSIVNISSVQASII------------TKNASAYVTSKHAVIGLTKSI 160 (264)
T ss_dssp HTTSSSCEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCchhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 12579999999865422 223567888888888776654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=6.3e-06 Score=76.49 Aligned_cols=97 Identities=10% Similarity=0.121 Sum_probs=68.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC--- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a--- 367 (422)
.++.++.+|++|++ +++.+ ..++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (249)
T 2ew8_A 54 RRVLTVKCDVSQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 127 (249)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 33333 2479999999997532 1345567999999988888874
Q ss_pred -HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 -HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 -~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 168 (249)
T 2ew8_A 128 MKRNG-WGRIINLTSTTYWLK------------IEAYTHYISTKAANIGFTRAL 168 (249)
T ss_dssp HHHHT-CEEEEEECCGGGGSC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CeEEEEEcchhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 4444 579999999866532 123457888888877776654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=5.9e-06 Score=77.79 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=70.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh---------hhhHHHHHHhhHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF---------DEALKLSVTINMLGTKRLVELC- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a- 367 (422)
.++.++.+|++|++ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (271)
T 3tzq_B 57 RGAVHHVVDLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI 130 (271)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46788999999873 3344433 78999999997632 1344567999999999999998
Q ss_pred ---HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 ---HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ---~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 131 ~~m~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 173 (271)
T 3tzq_B 131 PRLISAG-GGAIVNISSATAHAA------------YDMSTAYACTKAAIETLTRYV 173 (271)
T ss_dssp HHHHHTT-CEEEEEECCGGGTSB------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC-CCEEEEECCHHHcCC------------CCCChHHHHHHHHHHHHHHHH
Confidence 4544 579999999765421 223457888888887776654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.14 E-value=6.7e-06 Score=76.71 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=70.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 126 (258)
T 3a28_C 53 QKAVFVGLDVTDKA------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK 126 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46889999999873 333333 379999999997542 1345567999999999999998752
Q ss_pred ----CCC-ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THL-EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~-~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ . .++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 127 ~~~~~-~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 168 (258)
T 3a28_C 127 FDELG-VKGKIINAASIAAIQG------------FPILSAYSTTKFAVRGLTQAA 168 (258)
T ss_dssp HHHHT-CCCEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCcEEEEECcchhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 3 4 79999999865421 123457888888887776654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=5.1e-06 Score=77.23 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=70.5
Q ss_pred CcEEEEeCcCCCC-CCCCCHHHHHHHh-------cCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcC-----
Q psy16526 305 AKIKPILGDITEP-ELGISQNDQKILK-------QNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMT----- 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~-~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----- 371 (422)
.++.++.+|++|+ + +++.+. .++|+|||+||... .+.++..+++|+.|+.++++++...-
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 127 (254)
T 1sby_A 55 VNITFHTYDVTVPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKG 127 (254)
T ss_dssp SEEEEEECCTTSCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred ceEEEEEEecCCChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcC
Confidence 4688999999987 3 222222 37999999999764 34667789999999999999986421
Q ss_pred -CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 -HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 -~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 165 (254)
T 1sby_A 128 GPGGIIANICSVTGFNA------------IHQVPVYSASKAAVVSFTNSL 165 (254)
T ss_dssp CCCEEEEEECCGGGTSC------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECchhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 0257999999866422 123457888898888877654
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.13 E-value=5e-06 Score=79.05 Aligned_cols=77 Identities=12% Similarity=-0.036 Sum_probs=54.9
Q ss_pred HHhcCccEEEEcccccC------hh-hhHHHHHHhhHHHHHHHHHHHHhcC-CCceEEEEeCCccccCC--CcccccccC
Q psy16526 328 ILKQNVSVVFHSAATVK------FD-EALKLSVTINMLGTKRLVELCHEMT-HLEALIHVSTAYCNCDR--EEVREIIYS 397 (422)
Q Consensus 328 ~~~~~~d~ViH~Aa~~~------~~-~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v~~SS~~~~g~~--~~~~E~~~~ 397 (422)
..++++|+|||+|+..- +. ...++..++|+.||.+|++++++.+ +.++||++||+++||.. .+.+|+.+.
T Consensus 47 ~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~ 126 (298)
T 4b4o_A 47 SGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPG 126 (298)
T ss_dssp HCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCC
T ss_pred hhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCc
Confidence 44578999999997431 11 2334568899999999999998875 23458999999888763 467886555
Q ss_pred CCCCHHH
Q psy16526 398 PPYDPQK 404 (422)
Q Consensus 398 ~p~~p~~ 404 (422)
.|.+.++
T Consensus 127 ~~~~~~~ 133 (298)
T 4b4o_A 127 GDFDFFS 133 (298)
T ss_dssp SCSSHHH
T ss_pred cccchhH
Confidence 5555443
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=4.5e-06 Score=78.10 Aligned_cols=96 Identities=9% Similarity=0.071 Sum_probs=68.4
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
+.++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 60 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 133 (261)
T 2wyu_A 60 ALLFRADVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE 133 (261)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred cEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 688999999873 3344332 78999999997542 13455679999999999999998
Q ss_pred hcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- +-.++|++||..+.. |..++..|+.+|...|.+.+.+
T Consensus 134 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 174 (261)
T 2wyu_A 134 PLLREGGGIVTLTYYASEK------------VVPKYNVMAIAKAALEASVRYL 174 (261)
T ss_dssp TTEEEEEEEEEEECGGGTS------------BCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCEEEEEecccccC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 741 024899999975542 1123457888888888776654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.12 E-value=5.7e-06 Score=76.13 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=63.6
Q ss_pred cEEE-EeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHH----H
Q psy16526 306 KIKP-ILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVE----L 366 (422)
Q Consensus 306 ~v~~-v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~----~ 366 (422)
++.. +.+|++|++ +++.+ ..++|+|||+||.... .+.++..+++|+.|+.++++ .
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 125 (245)
T 2ph3_A 52 PLVAVLGANLLEAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKL 125 (245)
T ss_dssp SCEEEEECCTTSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEeccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 4555 899999863 33333 2479999999997542 13455678999999555554 4
Q ss_pred HHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.+ .+++|++||..+.... .+...|+.+|...|.+.+.+
T Consensus 126 ~~~~~-~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 166 (245)
T 2ph3_A 126 MMKAR-FGRIVNITSVVGILGN------------PGQANYVASKAGLIGFTRAV 166 (245)
T ss_dssp HHHHT-CEEEEEECCTHHHHCC------------SSBHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEEeChhhccCC------------CCCcchHHHHHHHHHHHHHH
Confidence 44444 6899999998554221 12456778888777666543
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=7.7e-06 Score=76.18 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=67.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHH----H
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVE----L 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~----~ 366 (422)
.++.++.+|++|++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++.+ .
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (254)
T 1hdc_A 51 DAARYQHLDVTIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124 (254)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999999873 3344433 79999999997542 13456678999999985554 4
Q ss_pred HHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.+ ..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 125 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 165 (254)
T 1hdc_A 125 MKDAG-GGSIVNISSAAGLMG------------LALTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHHT-CEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCEEEEECchhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 44444 679999999866422 123457888888877776654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=5.2e-06 Score=77.63 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=69.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++++. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (258)
T 3oid_A 54 VKVLVVKANVGQPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL 127 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999973 333333 367999999986431 13445679999999999999884
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 128 m~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 168 (258)
T 3oid_A 128 MEKNG-GGHIVSISSLGSIR------------YLENYTTVGVSKAALEALTRYL 168 (258)
T ss_dssp HHTTT-CEEEEEEEEGGGTS------------BCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CcEEEEECchhhCC------------CCCCcHHHHHHHHHHHHHHHHH
Confidence 333 56999999976542 2234567888888887776654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.11 E-value=8.6e-06 Score=76.77 Aligned_cols=102 Identities=10% Similarity=0.087 Sum_probs=73.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhc----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEM---- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~---- 370 (422)
.++.++.+|++|++ +++.+++ ++|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 74 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (278)
T 3sx2_A 74 SRIVARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ 147 (278)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 57899999999973 3344433 789999999986532 455677999999999999987542
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+.... ..+..+...|+.+|...+.+.+.+
T Consensus 148 ~~~g~iv~isS~~~~~~~--------~~~~~~~~~Y~asKaa~~~~~~~l 189 (278)
T 3sx2_A 148 GTGGSIVLISSSAGLAGV--------GSADPGSVGYVAAKHGVVGLMRVY 189 (278)
T ss_dssp CSCEEEEEECCGGGTSCC--------CCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEccHHhcCCC--------ccCCCCchHhHHHHHHHHHHHHHH
Confidence 223689999998654221 123345778999999888877654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.11 E-value=9.5e-06 Score=76.87 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=70.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
..++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 75 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 148 (281)
T 3v2h_A 75 SGTVLHHPADMTKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIP 148 (281)
T ss_dssp SSCEEEECCCTTCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 457899999999973 334433 378999999997542 13455679999999999999973
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 149 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 190 (281)
T 3v2h_A 149 PMKKKG-WGRIINIASAHGLVA------------SPFKSAYVAAKHGIMGLTKTV 190 (281)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-CCEEEEECCcccccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 333 578999999765421 123457888888877776654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.11 E-value=5.5e-06 Score=76.70 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=66.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc---C
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM---T 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 371 (422)
+++.++.+|+++++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 60 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 133 (249)
T 3f9i_A 60 DNYTIEVCNLANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK 133 (249)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEcCCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999863 4455544 68999999997642 1345667999999999999887531 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 134 ~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 170 (249)
T 3f9i_A 134 RYGRIINISSIVGIAG------------NPGQANYCASKAGLIGMTKSL 170 (249)
T ss_dssp TCEEEEEECCCCC--C------------CSCSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccHHhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 2569999999865422 123467888888777776654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.11 E-value=8.6e-06 Score=76.95 Aligned_cols=98 Identities=10% Similarity=0.085 Sum_probs=70.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 70 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 143 (281)
T 3s55_A 70 GRRCISAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAP 143 (281)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357899999999973 334333 379999999997541 244566799999999999998743
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 144 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 185 (281)
T 3s55_A 144 GMIKRN-YGRIVTVSSMLGHSA------------NFAQASYVSSKWGVIGLTKCA 185 (281)
T ss_dssp HHHHHT-CEEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-CCEEEEECChhhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 33 579999999865421 223457888888777766554
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.09 E-value=9.6e-06 Score=75.70 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=67.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH----
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH---- 368 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~---- 368 (422)
++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 59 ~~~~~~~D~~~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (260)
T 2z1n_A 59 QVDIVAGDIREPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMV 132 (260)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEccCCCHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 6889999999873 3444443 59999999996532 13456679999999977777664
Q ss_pred hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..++.. ..+...|+.+|...+.+.+.+
T Consensus 133 ~~~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 171 (260)
T 2z1n_A 133 EKG-WGRMVYIGSVTLLRP------------WQDLALSNIMRLPVIGVVRTL 171 (260)
T ss_dssp HHT-CEEEEEECCGGGTSC------------CTTBHHHHHHTHHHHHHHHHH
T ss_pred hcC-CcEEEEECchhhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 334 679999999866522 123457888888777766543
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.09 E-value=7.5e-06 Score=77.46 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=70.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 72 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 145 (277)
T 4dqx_A 72 GSKAFGVRVDVSSAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIP 145 (277)
T ss_dssp CTTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 356889999999873 334433 378999999997532 134566789999999999988853
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 146 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 187 (277)
T 4dqx_A 146 VMRRNGGGSIINTTSYTATS------------AIADRTAYVASKGAISSLTRAM 187 (277)
T ss_dssp HHTTTTCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEECchhhCc------------CCCCChhHHHHHHHHHHHHHHH
Confidence 1 1246999999976542 2234567888888887776654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.1e-05 Score=76.09 Aligned_cols=99 Identities=18% Similarity=0.131 Sum_probs=70.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++++. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 76 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 149 (280)
T 3pgx_A 76 GRKALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVP 149 (280)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 357889999999873 334433 378999999997642 134556789999999999999843
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+...++|++||..+.. +......|+.+|...+.+.+.+
T Consensus 150 ~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 192 (280)
T 3pgx_A 150 AMIEAGNGGSIVVVSSSAGLK------------ATPGNGHYSASKHGLTALTNTL 192 (280)
T ss_dssp HHHHHCSCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEEcchhhcc------------CCCCchhHHHHHHHHHHHHHHH
Confidence 22246899999976542 1223567888888877776654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.09 E-value=1e-05 Score=77.05 Aligned_cols=97 Identities=13% Similarity=0.189 Sum_probs=69.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|++ +++.+.+ ++|++||+||... + .+.++..+++|+.|+.++++++.
T Consensus 87 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 160 (287)
T 3rku_A 87 AKVHVAQLDITQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP 160 (287)
T ss_dssp CEEEEEECCTTCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999974 3344433 6899999999653 1 24456779999999999999984
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.. +......|+.+|...+.+.+.+
T Consensus 161 ~m~~~~-~g~IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 202 (287)
T 3rku_A 161 IFQAKN-SGDIVNLGSIAGRD------------AYPTGSIYCASKFAVGAFTDSL 202 (287)
T ss_dssp HHHHHT-CCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CCeEEEECChhhcC------------CCCCCchHHHHHHHHHHHHHHH
Confidence 333 57999999976542 1223457888888777766554
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=9.2e-06 Score=76.72 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=69.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 71 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (277)
T 2rhc_B 71 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144 (277)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence 46889999999873 333333 278999999997532 1345567899999999999998764
Q ss_pred -----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 145 ~~m~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 187 (277)
T 2rhc_B 145 GGMLERGTGRIVNIASTGGKQG------------VVHAAPYSASKHGVVGFTKAL 187 (277)
T ss_dssp TCHHHHTEEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCeEEEEECccccccC------------CCCCccHHHHHHHHHHHHHHH
Confidence 12579999999765321 123456888888777766554
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.08 E-value=1.1e-05 Score=75.92 Aligned_cols=97 Identities=9% Similarity=0.137 Sum_probs=69.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh--------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK--------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~--------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 70 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 143 (273)
T 1ae1_A 70 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 143 (273)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999873 333333 578999999997532 13456678999999999999884
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 144 ~m~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 185 (273)
T 1ae1_A 144 LLKASQ-NGNVIFLSSIAGFSA------------LPSVSLYSASKGAINQMTKSL 185 (273)
T ss_dssp HHHHHT-SEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CcEEEEEcCHhhcCC------------CCCcchhHHHHHHHHHHHHHH
Confidence 333 579999999876532 123457888888877776654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=8.5e-06 Score=77.75 Aligned_cols=99 Identities=10% Similarity=0.023 Sum_probs=70.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 99 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 172 (294)
T 3r3s_A 99 GRKAVLLPGDLSDES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAI 172 (294)
T ss_dssp TCCEEECCCCTTSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred CCcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 357889999999873 333332 478999999997431 13456679999999999999998
Q ss_pred hcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- +-.++|++||..++.. ......|+.+|...|.+.+.+
T Consensus 173 ~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 213 (294)
T 3r3s_A 173 PLLPKGASIITTSSIQAYQP------------SPHLLDYAATKAAILNYSRGL 213 (294)
T ss_dssp GGCCTTCEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCEEEEECChhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 643 1248999999866532 223456888888877776654
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.08 E-value=9e-06 Score=75.78 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=67.3
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc---
Q psy16526 308 KPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM--- 370 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 370 (422)
.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 52 ~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 125 (256)
T 2d1y_A 52 AFFQVDLEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 125 (256)
T ss_dssp EEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 78899999863 333332 378999999997542 1345667999999999999987542
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 126 ~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 163 (256)
T 2d1y_A 126 VGGGAIVNVASVQGLFA------------EQENAAYNASKGGLVNLTRSL 163 (256)
T ss_dssp TTCEEEEEECCGGGTSB------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEccccccCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 22679999999865421 113457888888888776654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.07 E-value=1.1e-05 Score=75.79 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=68.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 71 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (267)
T 1vl8_A 71 VETMAFRCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999873 333333 378999999997542 134456789999999999988743
Q ss_pred ---cCCCceEEEEeCCc-cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAY-CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~-~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||.. +.. |..+...|+.+|...|.+.+.+
T Consensus 145 m~~~~-~g~iv~isS~~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 186 (267)
T 1vl8_A 145 LRESD-NPSIINIGSLTVEEV------------TMPNISAYAASKGGVASLTKAL 186 (267)
T ss_dssp HTTCS-SCEEEEECCGGGTCC------------CSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEECCcchhcc------------CCCCChhHHHHHHHHHHHHHHH
Confidence 33 57999999976 321 1223467888888888777654
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.07 E-value=7.4e-06 Score=77.63 Aligned_cols=96 Identities=20% Similarity=0.156 Sum_probs=67.7
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------h---hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 307 IKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------D---EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
+.++.+|++|++ +++.+. .++|+|||+||.... . +.++..+++|+.|+.++++++.
T Consensus 73 ~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (285)
T 2p91_A 73 DLVVKCDVSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL 146 (285)
T ss_dssp CCEEECCTTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred eEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 678899999873 333333 378999999997542 1 3445679999999999999997
Q ss_pred hcC--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- +..++|++||..+... ..++..|+.+|...|.+.+.+
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 188 (285)
T 2p91_A 147 PLMEGRNGAIVTLSYYGAEKV------------VPHYNVMGIAKAALESTVRYL 188 (285)
T ss_dssp GGGTTSCCEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEEccchhccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 642 1269999999755421 113346888888877776654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=3.7e-06 Score=82.40 Aligned_cols=89 Identities=11% Similarity=0.083 Sum_probs=65.0
Q ss_pred CcEEEEeCc-CCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 305 AKIKPILGD-ITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 305 ~~v~~v~gD-l~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.+++++.|| ++|+ +++..+++++|+|||+|+... .+.|+.+ ++++++|++.+++++|||+||.+
T Consensus 51 ~~v~~v~~D~l~d~------~~l~~~~~~~d~Vi~~a~~~~--------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 51 PNVTLFQGPLLNNV------PLMDTLFEGAHLAFINTTSQA--------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTEEEEESCCTTCH------HHHHHHHTTCSEEEECCCSTT--------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcEEEECCccCCH------HHHHHHHhcCCEEEEcCCCCC--------cHHHHHH-HHHHHHHHHcCCccEEEEeCCcc
Confidence 468999999 9886 456778889999999997532 1347777 99999999874478999999986
Q ss_pred cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 384 CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 384 ~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.. ..+ .+.+ .|..+|...|+++..
T Consensus 116 ~~~----~~~----~~~~---~y~~sK~~~E~~~~~ 140 (352)
T 1xgk_A 116 HSL----YGP----WPAV---PMWAPKFTVENYVRQ 140 (352)
T ss_dssp GGG----TSS----CCCC---TTTHHHHHHHHHHHT
T ss_pred ccc----cCC----CCCc---cHHHHHHHHHHHHHH
Confidence 210 001 1223 355789999998865
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.06 E-value=6.6e-06 Score=76.71 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=68.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++.++.+|++|++ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 126 (257)
T 3tpc_A 53 AAVRFRNADVTNEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRL 126 (257)
T ss_dssp --CEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 46788999999873 3344433 79999999997531 245566799999999999999
Q ss_pred HHhc---------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM---------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~---------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... ++..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 127 ~~~~m~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 177 (257)
T 3tpc_A 127 AAEVMSQGEPDADGERGVIVNTASIAAFDG------------QIGQAAYAASKGGVAALTLPA 177 (257)
T ss_dssp HHHHHTTSCCCTTSCCEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCCCCeEEEEEechhhccC------------CCCCcchHHHHHHHHHHHHHH
Confidence 8753 12467999999865422 113457888887777766543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.6e-05 Score=75.47 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=70.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHH-
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELC- 367 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a- 367 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 76 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 149 (283)
T 3v8b_A 76 GGQAIALEADVSDEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149 (283)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 357889999999973 333333 379999999997532 1345567999999999999998
Q ss_pred ---HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 ---HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ---~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ ..++|++||..+... .+..+...|+.+|...+.+.+.+
T Consensus 150 ~~m~~~~-~g~Iv~isS~~~~~~----------~~~~~~~~Y~asKaa~~~l~~~l 194 (283)
T 3v8b_A 150 PYLKQRG-GGAIVVVSSINGTRT----------FTTPGATAYTATKAAQVAIVQQL 194 (283)
T ss_dssp HHHHHHT-CEEEEEECCSBTTTB----------CCSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CceEEEEcChhhccC----------CCCCCchHHHHHHHHHHHHHHHH
Confidence 4444 579999999765421 12224567888888877776654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.06 E-value=5.5e-06 Score=76.96 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=68.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
++..++.+|++|++ +.+++.+ ++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 128 (248)
T 3op4_A 55 DNGKGMALNVTNPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRG 128 (248)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35678999999873 3344433 78999999997542 234566799999999999998854
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 129 m~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~l 169 (248)
T 3op4_A 129 MMKKR-QGRIINVGSVVGTM------------GNAGQANYAAAKAGVIGFTKSM 169 (248)
T ss_dssp HHHHT-CEEEEEECCHHHHH------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCEEEEEcchhhcC------------CCCCChHHHHHHHHHHHHHHHH
Confidence 23 47899999975542 1123457788888766665543
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=2.6e-06 Score=79.18 Aligned_cols=105 Identities=10% Similarity=-0.027 Sum_probs=70.3
Q ss_pred EeCcCCCCCCCCCHHHHHHHhc----CccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy16526 310 ILGDITEPELGISQNDQKILKQ----NVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM---THLEALIHVSTA 382 (422)
Q Consensus 310 v~gDl~~~~~~l~~~~~~~~~~----~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~r~v~~SS~ 382 (422)
+.+|++++ ++++.+.+ ++|+|||+||......+++..+++|+.|+.++++++... .+..++|++||.
T Consensus 42 ~~~Dl~~~------~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~ 115 (257)
T 1fjh_A 42 LSTAEGRK------QAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115 (257)
T ss_dssp TTSHHHHH------HHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred cccCCCCH------HHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence 44566554 34455554 459999999986534557788999999999999998631 225799999998
Q ss_pred ccccCC--Cccccc-----c---------cCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDR--EEVREI-----I---------YSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~--~~~~E~-----~---------~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++... .+..++ . ...|..+...|+.+|...|.+.+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 169 (257)
T 1fjh_A 116 ASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKR 169 (257)
T ss_dssp GGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHH
Confidence 765210 010000 0 0134457889999999988887665
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.06 E-value=9.8e-06 Score=74.86 Aligned_cols=97 Identities=12% Similarity=0.033 Sum_probs=67.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.+++++.+|++|++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 127 (251)
T 1zk4_A 54 DQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127 (251)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 57899999999863 334333 258999999997532 13455679999998887766654
Q ss_pred --hcCCC-ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHL-EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~-~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ . +++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~~~-~~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 169 (251)
T 1zk4_A 128 MKNKG-LGASIINMSSIEGFVG------------DPSLGAYNASKGAVRIMSKSA 169 (251)
T ss_dssp HTTSS-SCEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCCEEEEeCCchhccC------------CCCCccchHHHHHHHHHHHHH
Confidence 433 5 79999999866432 123467888888888776643
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=75.21 Aligned_cols=97 Identities=10% Similarity=0.146 Sum_probs=69.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+. .++|+|||+||... + .+.++..+++|+.|+.++++++..
T Consensus 78 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 151 (262)
T 3rkr_A 78 GEAESHACDLSHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAP 151 (262)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57889999999873 333332 36899999999731 1 134556799999999999998754
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 152 ~~~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 193 (262)
T 3rkr_A 152 AMIAAK-RGHIINISSLAGKN------------PVADGAAYTASKWGLNGLMTSA 193 (262)
T ss_dssp HHHHTT-CCEEEEECSSCSSC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCC-CceEEEEechhhcC------------CCCCCchHHHHHHHHHHHHHHH
Confidence 33 57999999986541 2234567888888777776654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=75.97 Aligned_cols=98 Identities=10% Similarity=0.058 Sum_probs=69.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 78 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 151 (273)
T 3uf0_A 78 GGSAEAVVADLADLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTA 151 (273)
T ss_dssp TCEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 357889999999974 222222 378999999997642 13456679999999999999874
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 152 m~~~~-~g~IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 192 (273)
T 3uf0_A 152 MLAHG-SGRIVTIASMLSFQ------------GGRNVAAYAASKHAVVGLTRAL 192 (273)
T ss_dssp HHHHT-CEEEEEECCGGGTS------------CCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEEcchHhcC------------CCCCChhHHHHHHHHHHHHHHH
Confidence 333 57899999986542 1223457888888877776654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=1.4e-05 Score=74.04 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=69.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cC
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MT 371 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~ 371 (422)
++.++.+|++|++ +++++ ..++|+|||+||.... .+.++..+++|+.|+.++++++.. .+
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 124 (246)
T 2ag5_A 51 GIQTRVLDVTKKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK 124 (246)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEeeCCCHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999873 33333 3478999999997542 134556789999999999998753 23
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||..+.... | .+...|+.+|...|.+.+.+
T Consensus 125 -~g~iv~isS~~~~~~~----------~-~~~~~Y~~sK~a~~~~~~~l 161 (246)
T 2ag5_A 125 -SGNIINMSSVASSVKG----------V-VNRCVYSTTKAAVIGLTKSV 161 (246)
T ss_dssp -CEEEEEECCSBTTTBC----------C-TTBHHHHHHHHHHHHHHHHH
T ss_pred -CceEEEEechHhCcCC----------C-CCCccHHHHHHHHHHHHHHH
Confidence 5799999998654221 1 13467888888888777654
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.2e-05 Score=75.48 Aligned_cols=97 Identities=8% Similarity=0.077 Sum_probs=68.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
+++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 59 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 132 (266)
T 3p19_A 59 PNTLCAQVDVTDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP 132 (266)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47889999999873 334433 378999999997532 13455679999999999887764
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 133 ~~~~~-~g~IV~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 173 (266)
T 3p19_A 133 MKARN-CGTIINISSIAGKKT------------FPDHAAYCGTKFAVHAISENV 173 (266)
T ss_dssp HHHHT-CCEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CcEEEEEcChhhCCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 333 579999999865421 223457888888777766544
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=8.9e-06 Score=77.07 Aligned_cols=97 Identities=11% Similarity=0.086 Sum_probs=68.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 93 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (285)
T 2c07_A 93 YESSGYAGDVSKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 166 (285)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CceeEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999873 334433 378999999997542 134566799999998888887753
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.... .+...|+.+|...|.+.+.+
T Consensus 167 ~~~~~-~~~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 207 (285)
T 2c07_A 167 MINNR-YGRIINISSIVGLTGN------------VGQANYSSSKAGVIGFTKSL 207 (285)
T ss_dssp HHHHT-CEEEEEECCTHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCC-CCEEEEECChhhccCC------------CCCchHHHHHHHHHHHHHHH
Confidence 33 6799999998654221 12456888888777766554
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.1e-05 Score=75.88 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=69.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 76 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (272)
T 4e3z_A 76 GEAVAIPGDVGNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149 (272)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 57899999999873 333333 378999999997642 134556799999999999998865
Q ss_pred c------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++..++|++||..+.... ......|+.+|...|.+.+.+
T Consensus 150 ~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~l 195 (272)
T 4e3z_A 150 RMSRLYSGQGGAIVNVSSMAAILGS-----------ATQYVDYAASKAAIDTFTIGL 195 (272)
T ss_dssp HHCGGGTCCCEEEEEECCTHHHHCC-----------TTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCEEEEEcchHhccCC-----------CCCcchhHHHHHHHHHHHHHH
Confidence 3 124689999998654221 112346888888887776554
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.04 E-value=5.7e-06 Score=78.25 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=68.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||... +. +.++..+++|+.|+.++++++..
T Consensus 63 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 136 (281)
T 3svt_A 63 GAIRYEPTDITNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAR 136 (281)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 37899999999973 333333 36899999999622 11 34456789999999999998865
Q ss_pred cC---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MT---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.- +-.++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 137 ~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 178 (281)
T 3svt_A 137 EMVRGGGGSFVGISSIAASNT------------HRWFGAYGVTKSAVDHLMQLA 178 (281)
T ss_dssp HHHHTTCEEEEEECCHHHHSC------------CTTCTHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEeCHHHcCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 31 1358999999865422 122346888888887776654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-05 Score=75.33 Aligned_cols=96 Identities=21% Similarity=0.237 Sum_probs=69.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELC-- 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a-- 367 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (254)
T 3kzv_A 50 DRFFYVVGDITEDS------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALP 123 (254)
T ss_dssp GGEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 47899999999973 333333 378999999997432 1345567999999999999998
Q ss_pred --HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 --HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 --~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.+ .++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 124 ~m~~~~--g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 164 (254)
T 3kzv_A 124 ELKKTN--GNVVFVSSDACNM------------YFSSWGAYGSSKAALNHFAMTL 164 (254)
T ss_dssp HHHHHT--CEEEEECCSCCCC------------SSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC--CeEEEEcCchhcc------------CCCCcchHHHHHHHHHHHHHHH
Confidence 4433 6899999976542 2223557888888877776654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.04 E-value=1.4e-05 Score=75.01 Aligned_cols=100 Identities=13% Similarity=0.097 Sum_probs=70.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++++. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 67 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 140 (270)
T 3is3_A 67 GSDAIAIKADIRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYR 140 (270)
T ss_dssp TCCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357889999999973 333333 378999999997642 234566799999999999999886
Q ss_pred cC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.- .-.++|++||..+.. .+..+...|+.+|...+.+.+.+
T Consensus 141 ~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~l 181 (270)
T 3is3_A 141 HLTEGGRIVLTSSNTSKD-----------FSVPKHSLYSGSKGAVDSFVRIF 181 (270)
T ss_dssp HCCTTCEEEEECCTTTTT-----------CCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCeEEEEeCchhcc-----------CCCCCCchhHHHHHHHHHHHHHH
Confidence 42 124899999975311 12234567888888877776654
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.03 E-value=2.3e-05 Score=73.10 Aligned_cols=99 Identities=12% Similarity=0.046 Sum_probs=68.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 54 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 127 (257)
T 3imf_A 54 PGQILTVQMDVRNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGK 127 (257)
T ss_dssp TTCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357899999999973 333333 378999999996431 134566799999999999999832
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 128 ~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 170 (257)
T 3imf_A 128 YWIEKGIKGNIINMVATYAWDA------------GPGVIHSAAAKAGVLAMTKTL 170 (257)
T ss_dssp HHHHHTCCCEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCCcEEEEECchhhccC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 122568999999765421 123456777887777666543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.02 E-value=1.1e-05 Score=75.75 Aligned_cols=97 Identities=9% Similarity=0.089 Sum_probs=64.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 73 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (266)
T 3grp_A 73 KDVFVFSANLSDRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHS 146 (266)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999973 334433 378999999997542 23456679999999777766653
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 147 ~~~~~-~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 187 (266)
T 3grp_A 147 MMRRR-YGRIINITSIVGVVG------------NPGQTNYCAAKAGLIGFSKAL 187 (266)
T ss_dssp HHHHT-CEEEEEECCC-------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEECCHHHcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 333 579999999755421 123567888888777666544
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.1e-05 Score=75.01 Aligned_cols=97 Identities=12% Similarity=0.056 Sum_probs=67.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 63 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 136 (256)
T 3ezl_A 63 FDFYASEGNVGDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDG 136 (256)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 333333 378999999997642 14456679999999888877764
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 137 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 177 (256)
T 3ezl_A 137 MVERG-WGRIINISSVNGQKG------------QFGQTNYSTAKAGIHGFTMSL 177 (256)
T ss_dssp HHHHT-CEEEEEECCCCGGGS------------CSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEEcchhhccC------------CCCCcccHHHHHHHHHHHHHH
Confidence 333 578999999765421 123457888888777766544
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=7.3e-06 Score=76.04 Aligned_cols=94 Identities=14% Similarity=0.091 Sum_probs=57.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----------hhhhHHHHHHhhHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----------FDEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----------~~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
..++.++.+|++|++ +++.+. .++|+|||+||... ..+.++..+++|+.|+.++.++
T Consensus 57 ~~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 130 (253)
T 3qiv_A 57 GGTAISVAVDVSDPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA 130 (253)
T ss_dssp TCEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 357889999999973 334443 37999999999732 1134556799999996666665
Q ss_pred H----HhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 367 C----HEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 367 a----~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+ ++.+ ..++|++||..++. +...|+.+|...|.+.+.
T Consensus 131 ~~~~~~~~~-~g~iv~isS~~~~~---------------~~~~Y~asK~a~~~~~~~ 171 (253)
T 3qiv_A 131 VYKKMTKRG-GGAIVNQSSTAAWL---------------YSNYYGLAKVGINGLTQQ 171 (253)
T ss_dssp HHHHHHHHT-CEEEEEECC--------------------------CCHHHHHHHHHH
T ss_pred HHHHHHhcC-CCEEEEECCccccC---------------CCchhHHHHHHHHHHHHH
Confidence 5 3434 57899999986541 122366666666655544
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=74.19 Aligned_cols=97 Identities=9% Similarity=0.061 Sum_probs=68.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 59 ~~~~~~~D~~d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 132 (263)
T 3ak4_A 59 GGFAVEVDVTKRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHF 132 (263)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6788999999863 3444443 79999999997532 1345567899999999999988652
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 173 (263)
T 3ak4_A 133 LASNTKGVIVNTASLAAKVG------------APLLAHYSASKFAVFGWTQAL 173 (263)
T ss_dssp HHTTCCCEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEecccccccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 21468999999765421 113457888888877776654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.7e-05 Score=75.50 Aligned_cols=99 Identities=11% Similarity=0.099 Sum_probs=70.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++.++.+|++|++ +.+.++ .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 96 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 169 (291)
T 3ijr_A 96 GVKCVLLPGDLSDEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAAL 169 (291)
T ss_dssp TCCEEEEESCTTSHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 357899999999873 333333 378999999997531 13456679999999999999998
Q ss_pred hc-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+..++|++||..++.. ......|+.+|...|.+.+.+
T Consensus 170 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 210 (291)
T 3ijr_A 170 SHLKQGDVIINTASIVAYEG------------NETLIDYSATKGAIVAFTRSL 210 (291)
T ss_dssp TTCCTTCEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCEEEEEechHhcCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 64 12358999999866532 112456888888877776654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.3e-05 Score=74.12 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=65.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (246)
T 2uvd_A 54 SDAIAVRADVANAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF 127 (246)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 3344333 79999999997542 13456679999999777776654
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.+ ..++|++||..+.... .+...|..+|...+.+.+.
T Consensus 128 ~~~~~-~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~ 167 (246)
T 2uvd_A 128 MMRQR-HGRIVNIASVVGVTGN------------PGQANYVAAKAGVIGLTKT 167 (246)
T ss_dssp HHHHT-CEEEEEECCTHHHHCC------------TTBHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEECCHHhcCCC------------CCCchHHHHHHHHHHHHHH
Confidence 334 5799999998654221 1245677777766666544
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.4e-05 Score=74.48 Aligned_cols=99 Identities=14% Similarity=0.075 Sum_probs=70.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 51 ~~~~~~~~~D~~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 124 (257)
T 3tl3_A 51 GDRARFAAADVTDEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRL 124 (257)
T ss_dssp CTTEEEEECCTTCHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHH
Confidence 357899999999873 334433 389999999997531 134566799999999999999
Q ss_pred HHhc-----------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM-----------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~-----------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... ++-.++|++||..+.. +..+...|+.+|...+.+.+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 177 (257)
T 3tl3_A 125 AAERIAKTEPVGPNAEERGVIINTASVAAFD------------GQIGQAAYSASKGGVVGMTLPI 177 (257)
T ss_dssp HHHHHTTSCCC--CCCCSEEEEEECCCC--C------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccCCCcEEEEEcchhhcC------------CCCCCccHHHHHHHHHHHHHHH
Confidence 8753 1235899999976542 2224678888998877776654
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.7e-05 Score=75.70 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=69.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 91 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 164 (293)
T 3rih_A 91 GNVIGVRLDVSDPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP 164 (293)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred CcEEEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999973 33333 2378999999997542 13456679999999999999983
Q ss_pred --hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... +..+...|+.+|...+.+.+.+
T Consensus 165 m~~~~-~g~iV~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 206 (293)
T 3rih_A 165 LTASG-RGRVILTSSITGPVT-----------GYPGWSHYGASKAAQLGFMRTA 206 (293)
T ss_dssp HHHHS-SCEEEEECCSBTTTB-----------BCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCEEEEEeChhhccC-----------CCCCCHHHHHHHHHHHHHHHHH
Confidence 434 579999999764211 1123467888888777776654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-05 Score=74.98 Aligned_cols=98 Identities=8% Similarity=0.012 Sum_probs=69.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 72 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 145 (279)
T 3sju_A 72 GHDVDGSSCDVTSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLR 145 (279)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhc
Confidence 357899999999873 333332 378999999997542 134556789999999999998755
Q ss_pred ------cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ------MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ------~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |......|+.+|...+.+.+.+
T Consensus 146 ~~~~~~~~-~g~iV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 189 (279)
T 3sju_A 146 AGGMREAG-WGRIVNIASTGGKQ------------GVMYAAPYTASKHGVVGFTKSV 189 (279)
T ss_dssp HSSHHHHT-CEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhcC-CcEEEEECChhhcc------------CCCCChhHHHHHHHHHHHHHHH
Confidence 23 46899999986542 2223457888888777666544
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.3e-05 Score=75.60 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=69.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++..
T Consensus 74 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 147 (272)
T 4dyv_A 74 DDALCVPTDVTDPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFR 147 (272)
T ss_dssp SCCEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56889999999873 3344433 79999999997532 134456799999999988887754
Q ss_pred c----C-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----T-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. + +-.++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 148 ~~~~~~~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 191 (272)
T 4dyv_A 148 VMKAQEPRGGRIINNGSISATS------------PRPYSAPYTATKHAITGLTKST 191 (272)
T ss_dssp HHHHSSSCCEEEEEECCSSTTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCcEEEEECchhhcC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 2 1 135899999986542 2223567888888877776654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.3e-05 Score=75.51 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=68.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 78 ~~~~~~~~D~~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 151 (269)
T 4dmm_A 78 GEAFAVKADVSQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKI 151 (269)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999973 334433 378999999997642 134566799999999999998743
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 152 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 192 (269)
T 4dmm_A 152 MLKQR-SGRIINIASVVGEMG------------NPGQANYSAAKAGVIGLTKTV 192 (269)
T ss_dssp HHHHT-CCEEEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEECchhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 23 468999999755321 123457888888776666543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1e-05 Score=75.70 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=66.8
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh------------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF------------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
..++.+|++|++ +++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 61 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (265)
T 1qsg_A 61 DIVLQCDVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 134 (265)
T ss_dssp CCEEECCTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 368899999873 3344432 68999999997542 1234567999999999999999
Q ss_pred HhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...- +-.++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 135 ~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 176 (265)
T 1qsg_A 135 RSMLNPGSALLTLSYLGAERA------------IPNYNVMGLAKASLEANVRYM 176 (265)
T ss_dssp GGGEEEEEEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEcchhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 8742 0248999999765421 112446788888877776654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.1e-05 Score=73.74 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=69.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 69 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 142 (266)
T 4egf_A 69 GTDVHTVAIDLAEPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGK 142 (266)
T ss_dssp CCCEEEEECCTTSTT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357899999999985 223332 378999999997642 134556789999999999998864
Q ss_pred c----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +...++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 143 ~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~l 185 (266)
T 4egf_A 143 AMVAAGEGGAIITVASAAALA------------PLPDHYAYCTSKAGLVMATKVL 185 (266)
T ss_dssp HHHHHTSCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCeEEEEEcchhhcc------------CCCCChHHHHHHHHHHHHHHHH
Confidence 2 2135899999986542 2223457888888777766554
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.98 E-value=1e-05 Score=75.47 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=68.5
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++.++.+|++|++ +.+++. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 54 ~~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 127 (261)
T 3n74_A 54 GDAALAVAADISKEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI 127 (261)
T ss_dssp CTTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357899999999873 333333 378999999997541 13455678999999999998876
Q ss_pred hcC-------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT-------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~-------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- +..++|++||..+.. |......|+.+|...|.+.+.+
T Consensus 128 ~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 174 (261)
T 3n74_A 128 PHFKENGAKGQECVILNVASTGAGR------------PRPNLAWYNATKGWVVSVTKAL 174 (261)
T ss_dssp HHHHHHHHTTCCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCeEEEEeCchhhcC------------CCCCccHHHHHHHHHHHHHHHH
Confidence 431 124699999976532 2223456888888877776654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.98 E-value=1.8e-05 Score=76.73 Aligned_cols=97 Identities=11% Similarity=0.180 Sum_probs=70.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-----CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-----NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH---- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-----~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~---- 368 (422)
.++.++.+|++|+ ++++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 57 ~~~~~~~~Dv~d~------~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~ 130 (327)
T 1jtv_A 57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (327)
T ss_dssp TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCH------HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5689999999987 34555554 48999999986531 13456679999999999999863
Q ss_pred hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ......|+.+|...|.+.+.+
T Consensus 131 ~~~-~g~IV~isS~~~~~~------------~~~~~~Y~aSK~a~~~~~~~l 169 (327)
T 1jtv_A 131 RRG-SGRVLVTGSVGGLMG------------LPFNDVYCASKFALEGLCESL 169 (327)
T ss_dssp HHT-CEEEEEEEEGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred hcC-CCEEEEECCcccccC------------CCCChHHHHHHHHHHHHHHHH
Confidence 333 579999999865421 112457888888888777654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.3e-05 Score=75.96 Aligned_cols=98 Identities=10% Similarity=0.088 Sum_probs=64.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC---------hhhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK---------FDEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|++|++ +.+.+. .++|++||+||... ..+.++..+++|+.|+.++++++.
T Consensus 79 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 152 (280)
T 4da9_A 79 ARVIFLRADLADLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVL 152 (280)
T ss_dssp CCEEEEECCTTSGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 57899999999974 223333 37899999999732 123456678999999999998876
Q ss_pred hc----C--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM----T--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~----~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. + +..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 153 ~~~~~~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 198 (280)
T 4da9_A 153 KAMLASDARASRSIINITSVSAVMT------------SPERLDYCMSKAGLAAFSQGL 198 (280)
T ss_dssp HHHHHHCCCCCEEEEEECCC-------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEEcchhhccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 53 1 1358999999865421 112346888888777766554
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.97 E-value=3e-05 Score=73.78 Aligned_cols=81 Identities=19% Similarity=0.198 Sum_probs=54.4
Q ss_pred cCcEEEEeCcCCCC-CCCCCH--HHHHHHhcCccEEEEcccccCh-----------------------------------
Q psy16526 304 LAKIKPILGDITEP-ELGISQ--NDQKILKQNVSVVFHSAATVKF----------------------------------- 345 (422)
Q Consensus 304 ~~~v~~v~gDl~~~-~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~----------------------------------- 345 (422)
..++.++.+|++++ +.. .. +.+.+...++|++||+||....
T Consensus 61 ~~~~~~~~~Dl~~~~~~v-~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (311)
T 3o26_A 61 HENVVFHQLDVTDPIATM-SSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMS 139 (311)
T ss_dssp CCSEEEEECCTTSCHHHH-HHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEE
T ss_pred CCceEEEEccCCCcHHHH-HHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccc
Confidence 35799999999997 311 00 0111122479999999997631
Q ss_pred --hhhHHHHHHhhHHHHHHHHHHHHhc---CCCceEEEEeCCccc
Q psy16526 346 --DEALKLSVTINMLGTKRLVELCHEM---THLEALIHVSTAYCN 385 (422)
Q Consensus 346 --~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~r~v~~SS~~~~ 385 (422)
.+..+..+++|+.|+.++++++... .+..++|++||..+.
T Consensus 140 ~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~ 184 (311)
T 3o26_A 140 ETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGS 184 (311)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGS
T ss_pred cchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcc
Confidence 1233456899999999998887531 225799999997553
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.9e-05 Score=73.92 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=67.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 64 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 137 (267)
T 1iy8_A 64 AEVLTTVADVSDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK 137 (267)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999873 334433 278999999997532 13455678999999987766553
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 138 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 179 (267)
T 1iy8_A 138 IMREQG-SGMVVNTASVGGIRG------------IGNQSGYAAAKHGVVGLTRNS 179 (267)
T ss_dssp HHHHHT-CCEEEEECCGGGTSB------------CSSBHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-CCEEEEEcchhhccC------------CCCCccHHHHHHHHHHHHHHH
Confidence 334 579999999865421 123457888888777766543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.4e-05 Score=73.82 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=71.4
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhc-----CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQ-----NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~-----~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
..+++.++.+|++|++ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 42 ~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 115 (244)
T 4e4y_A 42 SAENLKFIKADLTKQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENN 115 (244)
T ss_dssp CCTTEEEEECCTTCHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGG
T ss_pred ccccceEEecCcCCHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 3457889999999873 4444443 78999999997531 1345667999999999999998764
Q ss_pred C-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- .-.++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 116 ~~~~g~iv~~sS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 154 (244)
T 4e4y_A 116 LKVGASIVFNGSDQCFIA------------KPNSFAYTLSKGAIAQMTKSL 154 (244)
T ss_dssp EEEEEEEEEECCGGGTCC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred hccCcEEEEECCHHHccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 2 1148999999765421 223457888888888777654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.97 E-value=2.4e-05 Score=73.65 Aligned_cols=99 Identities=10% Similarity=0.093 Sum_probs=70.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 154 (271)
T 3v2g_A 81 GRAVAIRADNRDAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH 154 (271)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999873 3344333 78999999997542 1345667999999999999998764
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.. .|..+...|+.+|...|.+.+.+
T Consensus 155 m~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~l~~~l 194 (271)
T 3v2g_A 155 LGDGGRIITIGSNLAEL-----------VPWPGISLYSASKAALAGLTKGL 194 (271)
T ss_dssp CCTTCEEEEECCGGGTC-----------CCSTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEeChhhcc-----------CCCCCchHHHHHHHHHHHHHHHH
Confidence 2246899999864321 12234567888888877776654
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=82.92 Aligned_cols=96 Identities=18% Similarity=0.196 Sum_probs=71.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhcCCCce
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEMTHLEA 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r 375 (422)
.++.++.+|++|+ ++++.+++ .+|+|||+||..... +..+..+++|+.|+.++.++++...+.++
T Consensus 312 ~~v~~~~~Dvtd~------~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~ 385 (511)
T 2z5l_A 312 CEVVHAACDVAER------DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDA 385 (511)
T ss_dssp CEEEEEECCSSCH------HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCC
T ss_pred CEEEEEEeCCCCH------HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCE
Confidence 4689999999987 34556654 499999999976421 34455689999999999999987623789
Q ss_pred EEEEeCCcc-ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 376 LIHVSTAYC-NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 376 ~v~~SS~~~-~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
||++||..+ +|. .....|+.+|...|.+.+.
T Consensus 386 ~V~~SS~a~~~g~-------------~g~~~YaaaKa~ld~la~~ 417 (511)
T 2z5l_A 386 FVLFSSVTGTWGN-------------AGQGAYAAANAALDALAER 417 (511)
T ss_dssp EEEEEEGGGTTCC-------------TTBHHHHHHHHHHHHHHHH
T ss_pred EEEEeCHHhcCCC-------------CCCHHHHHHHHHHHHHHHH
Confidence 999999754 322 1235788888888877654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.97 E-value=9.2e-06 Score=75.97 Aligned_cols=100 Identities=14% Similarity=0.029 Sum_probs=69.9
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
..++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 72 ~~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 145 (267)
T 3gdg_A 72 GIKAKAYKCQVDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGH 145 (267)
T ss_dssp CCCEECCBCCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceeEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence 357889999999873 333332 367999999997542 13456679999999999999883
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+.... +..+...|+.+|...|.+.+.+
T Consensus 146 ~~~~~~-~g~iv~isS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~l 189 (267)
T 3gdg_A 146 HFKERG-TGSLVITASMSGHIAN----------FPQEQTSYNVAKAGCIHMARSL 189 (267)
T ss_dssp HHHHHT-CCEEEEECCGGGTSCC----------SSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-CceEEEEccccccccC----------CCCCCCcchHHHHHHHHHHHHH
Confidence 333 4689999997654221 1123457888888877777654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=2.2e-05 Score=75.07 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=69.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++++. .++|+|||+||.... .+..+..+++|+.|+.++++++..
T Consensus 80 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 153 (301)
T 3tjr_A 80 FDAHGVVCDVRHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPR 153 (301)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 57899999999873 333333 378999999997532 134556799999999999999754
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+...++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 154 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 195 (301)
T 3tjr_A 154 LLEQGTGGHIAFTASFAGLV------------PNAGLGTYGVAKYGVVGLAETL 195 (301)
T ss_dssp HHHHCSCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEeCchhhcC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 22136899999986542 2224567888888777766554
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=1.7e-05 Score=74.30 Aligned_cols=97 Identities=10% Similarity=-0.002 Sum_probs=68.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|++|++ +.+++. .++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 76 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 149 (267)
T 4iiu_A 76 GNGRLLSFDVANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMP 149 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999873 333333 378999999997642 13456679999999999999874
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 150 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 191 (267)
T 4iiu_A 150 MIGARQ-GGRIITLSSVSGVMG------------NRGQVNYSAAKAGIIGATKAL 191 (267)
T ss_dssp HHHHTS-CEEEEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCC-CcEEEEEcchHhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 333 579999999755321 123456888888666655543
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.4e-05 Score=73.79 Aligned_cols=97 Identities=9% Similarity=0.090 Sum_probs=68.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
.++.++.+|++|+ ++++.+.+ ++|++||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 69 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 142 (272)
T 2nwq_A 69 TRVLPLTLDVRDR------AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLP 142 (272)
T ss_dssp SCEEEEECCTTCH------HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999987 34455544 45999999997532 13456679999999888877764
Q ss_pred ---hcCCCc-eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLE-ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~-r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ .. ++|++||..+... ......|+.+|...|.+.+.+
T Consensus 143 ~m~~~~-~g~~IV~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 185 (272)
T 2nwq_A 143 RLIAHG-AGASIVNLGSVAGKWP------------YPGSHVYGGTKAFVEQFSLNL 185 (272)
T ss_dssp HHHHHC-TTCEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CCcEEEEeCCchhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 333 45 9999999865421 123457888888888776654
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.96 E-value=2e-05 Score=73.37 Aligned_cols=97 Identities=4% Similarity=-0.052 Sum_probs=68.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 129 (252)
T 3h7a_A 56 GRIVARSLDARNED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLM 129 (252)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEECcCCCHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57899999999973 334443 378999999997542 134556799999999999988743
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |......|+.+|...+.+.+.+
T Consensus 130 ~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 169 (252)
T 3h7a_A 130 LAHG-QGKIFFTGATASLR------------GGSGFAAFASAKFGLRAVAQSM 169 (252)
T ss_dssp HHHT-CEEEEEEEEGGGTC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcC-CcEEEEECCHHHcC------------CCCCCccHHHHHHHHHHHHHHH
Confidence 33 46899999976542 1223557888888777766544
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.6e-05 Score=73.63 Aligned_cols=97 Identities=11% Similarity=0.149 Sum_probs=69.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 82 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 155 (275)
T 4imr_A 82 GTAQELAGDLSEAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKM 155 (275)
T ss_dssp CCEEEEECCTTSTT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 56889999999985 223332 378999999996431 134556799999999999999843
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 156 ~~~~-~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 195 (275)
T 4imr_A 156 VARK-WGRVVSIGSINQLR------------PKSVVTAYAATKAAQHNLIQSQ 195 (275)
T ss_dssp HHHT-CEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred HhcC-CcEEEEECCHHhCC------------CCCCchhhHHHHHHHHHHHHHH
Confidence 33 57999999976542 3334557888888777776554
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.4e-05 Score=75.90 Aligned_cols=87 Identities=10% Similarity=0.202 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+ |.++
T Consensus 55 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~--S~~g 114 (307)
T 2gas_A 55 LGVILLEGDINDH------ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP--SEFG 114 (307)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC--SCCS
T ss_pred CCCEEEEeCCCCH------HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee--cccc
Confidence 4688999999986 467888899999999999754 5678999999998755889983 4443
Q ss_pred ccCCCcccccccCCCCCH-HHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDP-QKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p-~~~y~~~K~~~E~~~~~ 419 (422)
. . .+| ..+..| ...| .+|...|++++.
T Consensus 115 ~--~--~~~---~~~~~p~~~~y-~sK~~~e~~~~~ 142 (307)
T 2gas_A 115 L--D--VDR---HDAVEPVRQVF-EEKASIRRVIEA 142 (307)
T ss_dssp S--C--TTS---CCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred c--C--ccc---ccCCCcchhHH-HHHHHHHHHHHH
Confidence 2 1 122 123334 5678 899998888764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.96 E-value=2.3e-05 Score=72.92 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=68.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 51 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (256)
T 1geg_A 51 GHAVAVKVDVSDRD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 124 (256)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 3444433 79999999986532 1345567999999999998887652
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+... ......|+.+|...|.+.+.+
T Consensus 125 ~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 166 (256)
T 1geg_A 125 FKKEGHGGKIINACSQAGHVG------------NPELAVYSSSKFAVRGLTQTA 166 (256)
T ss_dssp HHHHTSCEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEECchhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 21468999999755321 112457888888777776654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.4e-05 Score=73.99 Aligned_cols=98 Identities=11% Similarity=0.027 Sum_probs=69.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 75 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 148 (277)
T 3gvc_A 75 CGAAACRVDVSDEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR 148 (277)
T ss_dssp SSCEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46789999999973 333332 378999999997542 2345667999999999999988542
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.. +..+...|+.+|...|.+.+.+
T Consensus 149 m~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 189 (277)
T 3gvc_A 149 MIERGGGAIVNLSSLAGQV------------AVGGTGAYGMSKAGIIQLSRIT 189 (277)
T ss_dssp HHHTTCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcchhhcc------------CCCCchhHHHHHHHHHHHHHHH
Confidence 2246899999976532 2224567888888877776644
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.3e-05 Score=75.43 Aligned_cols=96 Identities=15% Similarity=0.086 Sum_probs=68.0
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------h---hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 307 IKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------D---EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
+.++.+|++|++ +++.+. .++|++||+||.... . +.++..+++|+.|+.++++++.
T Consensus 58 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 131 (275)
T 2pd4_A 58 PYVYELDVSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK 131 (275)
T ss_dssp CCEEECCTTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred cEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 678999999873 333333 268999999997542 1 3455679999999999999998
Q ss_pred hcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- +-.++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 132 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 172 (275)
T 2pd4_A 132 PLLNNGASVLTLSYLGSTK------------YMAHYNVMGLAKAALESAVRYL 172 (275)
T ss_dssp GGEEEEEEEEEEECGGGTS------------BCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCEEEEEecchhcC------------CCCCchhhHHHHHHHHHHHHHH
Confidence 741 025899999975532 1223457888888887776654
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=3.9e-05 Score=71.68 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=69.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
++.++.+|++|++ +++.+. .++|++||+||.... .+.....+++|+.|+.++++++
T Consensus 60 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 133 (266)
T 3oig_A 60 DSIILPCDVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAA 133 (266)
T ss_dssp CCEEEECCCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEeCCCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHH
Confidence 7899999999984 333332 378999999997541 1334566899999999999999
Q ss_pred HhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...- +-.++|++||..+.. |......|+.+|...+.+.+.+
T Consensus 134 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 175 (266)
T 3oig_A 134 RPMMTEGGSIVTLTYLGGEL------------VMPNYNVMGVAKASLDASVKYL 175 (266)
T ss_dssp GGGCTTCEEEEEEECGGGTS------------CCTTTHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCceEEEEecccccc------------cCCCcchhHHHHHHHHHHHHHH
Confidence 8642 125899999976542 2223567888888877776654
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.8e-05 Score=72.39 Aligned_cols=99 Identities=13% Similarity=0.198 Sum_probs=69.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCc----cEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcC-
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNV----SVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMT- 371 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~----d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 371 (422)
..++.++.+|++++ ++++.+.+++ |+|||+||.... .+.++..+++|+.|+.++++++...-
T Consensus 46 ~~~~~~~~~D~~~~------~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 119 (230)
T 3guy_A 46 SNNVGYRARDLASH------QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK 119 (230)
T ss_dssp SSCCCEEECCTTCH------HHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCeEeecCCCH------HHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999987 3455555443 999999996531 13455678999999999999886531
Q ss_pred -CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 -HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 -~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 120 ~~~~~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 157 (230)
T 3guy_A 120 DQPVNVVMIMSTAAQQ------------PKAQESTYCAVKWAVKGLIESV 157 (230)
T ss_dssp TSCCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEeecccCC------------CCCCCchhHHHHHHHHHHHHHH
Confidence 113899999976542 1223457888888777776654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.94 E-value=2e-05 Score=74.67 Aligned_cols=98 Identities=12% Similarity=0.142 Sum_probs=67.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEc-ccccCh------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHS-AATVKF------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~-Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|+|||+ |+.... .+..+..+++|+.|+.++++++...
T Consensus 78 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 151 (286)
T 1xu9_A 78 ASAHYIAGTMEDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 151 (286)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999863 333332 379999999 555321 2344567999999999999988642
Q ss_pred C--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- +..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 152 ~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 191 (286)
T 1xu9_A 152 LKQSNGSIVVVSSLAGKVA------------YPMVAAYSASKFALDGFFSSI 191 (286)
T ss_dssp HHHHTCEEEEEEEGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEECCcccccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 0 1358999999865421 123567888888887776654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.4e-05 Score=74.05 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=68.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH- 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~- 368 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 51 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 124 (247)
T 3rwb_A 51 GKKARAIAADISDPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD 124 (247)
T ss_dssp CTTEEECCCCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 357889999999873 334433 378999999997542 13456679999999999998843
Q ss_pred ---hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 ---EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ---~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+...++|++||..+... ......|+.+|...+.+.+.+
T Consensus 125 ~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 167 (247)
T 3rwb_A 125 QMRAAGKAGRVISIASNTFFAG------------TPNMAAYVAAKGGVIGFTRAL 167 (247)
T ss_dssp HHHHHTCCEEEEEECCTHHHHT------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcEEEEECchhhccC------------CCCchhhHHHHHHHHHHHHHH
Confidence 3332479999999765421 112456777887666665543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.94 E-value=3e-05 Score=74.77 Aligned_cols=98 Identities=11% Similarity=0.081 Sum_probs=69.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 107 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 180 (317)
T 3oec_A 107 RRIIARQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPS 180 (317)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57889999999873 334433 378999999997542 244566799999999999998854
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.-.++|++||..+... ......|+.+|...+.+.+.+
T Consensus 181 m~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 222 (317)
T 3oec_A 181 MIERGQGGSVIFVSSTVGLRG------------APGQSHYAASKHGVQGLMLSL 222 (317)
T ss_dssp HHHTCSCEEEEEECCGGGSSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEECcHHhcCC------------CCCCcchHHHHHHHHHHHHHH
Confidence 222357999999865421 123567888888877776654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.9e-05 Score=74.32 Aligned_cols=98 Identities=6% Similarity=-0.004 Sum_probs=69.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++++.+ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 75 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 148 (271)
T 4ibo_A 75 HDAEAVAFDVTSES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKR 148 (271)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 56889999999873 3344433 78999999997531 1345667999999999998887642
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 149 ~~~~~~g~iV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 189 (271)
T 4ibo_A 149 MIPRGYGKIVNIGSLTSEL------------ARATVAPYTVAKGGIKMLTRAM 189 (271)
T ss_dssp HHHHTCEEEEEECCGGGTS------------BCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEccHHhCC------------CCCCchhHHHHHHHHHHHHHHH
Confidence 1246899999975431 1223457888888777776654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.9e-05 Score=74.29 Aligned_cols=96 Identities=11% Similarity=0.140 Sum_probs=68.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
....+.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 54 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 127 (269)
T 3vtz_A 54 VSDHFKIDVTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM 127 (269)
T ss_dssp SSEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5678899999873 333333 378999999997542 134456789999999999998754
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..++.. ......|+.+|...|.+.+.+
T Consensus 128 ~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 167 (269)
T 3vtz_A 128 LAIG-HGSIINIASVQSYAA------------TKNAAAYVTSKHALLGLTRSV 167 (269)
T ss_dssp HHHT-CEEEEEECCGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcC-CCEEEEECchhhccC------------CCCChhHHHHHHHHHHHHHHH
Confidence 23 579999999866532 223457888888887777654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.92 E-value=2.5e-05 Score=72.06 Aligned_cols=98 Identities=10% Similarity=0.114 Sum_probs=68.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++++. .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 127 (247)
T 3lyl_A 54 FKARGLVLNISDIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRG 127 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999873 333333 258999999997642 1345567999999999999987542
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 168 (247)
T 3lyl_A 128 MMKKRWGRIISIGSVVGSAG------------NPGQTNYCAAKAGVIGFSKSL 168 (247)
T ss_dssp HHHHTCEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEEcchhhccC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 12468999999865422 123457888888777666544
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=74.68 Aligned_cols=98 Identities=11% Similarity=0.002 Sum_probs=69.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+++. .++|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 79 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (271)
T 4iin_A 79 YKAAVIKFDAASES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKV 152 (271)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 57899999999873 333333 3789999999976421 345667999999999998887542
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 153 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 193 (271)
T 4iin_A 153 MSKSRFGSVVNVASIIGER------------GNMGQTNYSASKGGMIAMSKSF 193 (271)
T ss_dssp HHHHTCEEEEEECCHHHHH------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCEEEEEechhhcC------------CCCCchHhHHHHHHHHHHHHHH
Confidence 1257999999975532 1224567888888888777654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.92 E-value=1e-05 Score=76.92 Aligned_cols=87 Identities=11% Similarity=0.237 Sum_probs=63.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+ |.++
T Consensus 56 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~--S~~g 115 (308)
T 1qyc_A 56 SGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP--SEFG 115 (308)
T ss_dssp TTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC--SCCS
T ss_pred CCCEEEEeccCCH------HHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee--cccc
Confidence 5689999999986 456788889999999998642 5678999999999765899984 3333
Q ss_pred ccCCCcccccccCCCCCH-HHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDP-QKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p-~~~y~~~K~~~E~~~~~ 419 (422)
. . .+| ..|..| ...| .+|...|+++++
T Consensus 116 ~--~--~~~---~~~~~p~~~~y-~sK~~~e~~~~~ 143 (308)
T 1qyc_A 116 N--D--VDN---VHAVEPAKSVF-EVKAKVRRAIEA 143 (308)
T ss_dssp S--C--TTS---CCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred c--C--ccc---cccCCcchhHH-HHHHHHHHHHHh
Confidence 2 1 122 123344 4677 899999988765
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.1e-05 Score=72.83 Aligned_cols=97 Identities=10% Similarity=0.189 Sum_probs=67.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 56 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 129 (247)
T 2jah_A 56 AKVHVLELDVADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH 129 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 333333 379999999997532 1345567999999999999988642
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ .++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 130 ~~~~~-g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 169 (247)
T 2jah_A 130 LLRSK-GTVVQMSSIAGRVN------------VRNAAVYQATKFGVNAFSETL 169 (247)
T ss_dssp HHHHT-CEEEEECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHCC-CEEEEEccHHhcCC------------CCCCcHHHHHHHHHHHHHHHH
Confidence 12 69999999765421 123456777887766665543
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=77.23 Aligned_cols=87 Identities=8% Similarity=0.195 Sum_probs=64.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++++++++|++.+++++||+ |.++
T Consensus 56 ~~v~~v~~D~~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~--S~~g 115 (321)
T 3c1o_A 56 MGVTIIEGEMEEH------EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP--SDFG 115 (321)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC--SCCS
T ss_pred CCcEEEEecCCCH------HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec--cccc
Confidence 4689999999986 467888899999999998642 6778999999998754889983 4443
Q ss_pred ccCCCcccccccCCCCCH-HHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDP-QKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p-~~~y~~~K~~~E~~~~~ 419 (422)
. . .+| ..+..| ...| .+|...|++++.
T Consensus 116 ~--~--~~~---~~~~~p~~~~y-~sK~~~e~~~~~ 143 (321)
T 3c1o_A 116 C--E--EDR---IKPLPPFESVL-EKKRIIRRAIEA 143 (321)
T ss_dssp S--C--GGG---CCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred c--C--ccc---cccCCCcchHH-HHHHHHHHHHHH
Confidence 2 1 233 234445 5678 899999988764
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.7e-05 Score=74.40 Aligned_cols=98 Identities=9% Similarity=0.021 Sum_probs=69.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 74 ~~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 147 (269)
T 3gk3_A 74 GRDFKAYAVDVADFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIA 147 (269)
T ss_dssp TCCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357899999999873 333333 379999999997542 134566799999999999998753
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 148 ~~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 189 (269)
T 3gk3_A 148 GMVERR-FGRIVNIGSVNGSRG------------AFGQANYASAKAGIHGFTKTL 189 (269)
T ss_dssp HHHHHT-CEEEEEECCHHHHHC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CCEEEEeCChhhccC------------CCCcchHHHHHHHHHHHHHHH
Confidence 23 479999999755421 223467888888777766544
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.90 E-value=2.6e-05 Score=76.23 Aligned_cols=100 Identities=12% Similarity=0.203 Sum_probs=70.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 101 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 174 (346)
T 3kvo_A 101 GKALPCIVDVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPY 174 (346)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999873 333333 379999999997542 1345667999999999999998532
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... +......|+.+|...+.+.+.+
T Consensus 175 m~~~~~g~IV~iSS~~~~~~~----------~~~~~~~Y~aSKaal~~l~~~l 217 (346)
T 3kvo_A 175 LKKSKVAHILNISPPLNLNPV----------WFKQHCAYTIAKYGMSMYVLGM 217 (346)
T ss_dssp HTTCSSCEEEEECCCCCCCGG----------GTSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCHHHcCCC----------CCCCchHHHHHHHHHHHHHHHH
Confidence 225799999997654211 1224567888888777776654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=2.7e-05 Score=71.66 Aligned_cols=97 Identities=16% Similarity=0.237 Sum_probs=67.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 50 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 123 (235)
T 3l6e_A 50 AVIGIVADLAHHE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLI 123 (235)
T ss_dssp GEEEEECCTTSHH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEECCCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5889999999873 333333 368999999997532 1345667999999999999988542
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+.. +......|+.+|...+.+.+.+
T Consensus 124 ~~~~~~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 162 (235)
T 3l6e_A 124 GERGGVLANVLSSAAQV------------GKANESLYCASKWGMRGFLESL 162 (235)
T ss_dssp TTTCEEEEEECCEECCS------------SCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCEEEEEeCHHhcC------------CCCCCcHHHHHHHHHHHHHHHH
Confidence 1113899999975542 1223567888888888776654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.90 E-value=2.9e-05 Score=73.37 Aligned_cols=100 Identities=14% Similarity=0.085 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++++++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 154 (276)
T 3r1i_A 81 GKALPIRCDVTQPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154 (276)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999973 3444433 78999999997642 1345566899999999999988642
Q ss_pred ----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...++|++||..+.... +..+...|+.+|...+.+.+.+
T Consensus 155 m~~~~~~g~iv~isS~~~~~~~----------~~~~~~~Y~asKaa~~~l~~~l 198 (276)
T 3r1i_A 155 MVDQGLGGTIITTASMSGHIIN----------IPQQVSHYCTSKAAVVHLTKAM 198 (276)
T ss_dssp HHHHTSCEEEEEECCGGGTSCC----------CSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcEEEEECchHhcccC----------CCCCcchHHHHHHHHHHHHHHH
Confidence 212689999997654221 1123457888888877776654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.8e-05 Score=74.04 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=68.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++.++.+|++|++ +++++. .++|++||+||... + .+.++..+++|+.|+.++++++.
T Consensus 59 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 132 (264)
T 3ucx_A 59 GRRALSVGTDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFT 132 (264)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred CCcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 357899999999973 333333 37899999998742 1 13455679999999999999875
Q ss_pred hcC--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- +-.++|++||..+.. +..+...|+.+|...+.+.+.+
T Consensus 133 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 174 (264)
T 3ucx_A 133 PALEESKGAVVNVNSMVVRH------------SQAKYGAYKMAKSALLAMSQTL 174 (264)
T ss_dssp HHHHHHTCEEEEECCGGGGC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECcchhcc------------CCCccHHHHHHHHHHHHHHHHH
Confidence 421 015899999976542 2223457888888777776654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=2e-05 Score=74.41 Aligned_cols=97 Identities=9% Similarity=0.156 Sum_probs=68.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------h----hhHHHHHHhhHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------D----EALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~----~~~~~~~~~Nv~gt~~ll~~a 367 (422)
++.++.+|++|++ +++.+. .++|+|||+||.... . +.++..+++|+.|+.++++++
T Consensus 59 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 132 (280)
T 1xkq_A 59 QVNSVVADVTTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV 132 (280)
T ss_dssp GEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 6899999999873 333333 378999999996531 1 235567899999999999998
Q ss_pred Hhc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
... .+ .++|++||..+.... ..+...|+.+|...|.+.+.+
T Consensus 133 ~~~~~~~~-g~iv~isS~~~~~~~-----------~~~~~~Y~asK~a~~~~~~~l 176 (280)
T 1xkq_A 133 KPHLVASK-GEIVNVSSIVAGPQA-----------QPDFLYYAIAKAALDQYTRST 176 (280)
T ss_dssp HHHHHHHT-CEEEEECCGGGSSSC-----------CCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCC-CcEEEecCccccCCC-----------CCcccHHHHHHHHHHHHHHHH
Confidence 752 12 689999998654221 023457888888887776654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.2e-05 Score=73.69 Aligned_cols=94 Identities=17% Similarity=0.180 Sum_probs=66.1
Q ss_pred EEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----Hh
Q psy16526 308 KPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC----HE 369 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~ 369 (422)
..+.+|++|++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+.++++++ ++
T Consensus 69 ~~~~~Dv~~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 142 (266)
T 3uxy_A 69 LHLPGDLREAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA 142 (266)
T ss_dssp EECCCCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hccCcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 44578888763 22222 2378999999997642 2345567899999999999998 44
Q ss_pred cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 143 ~~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 180 (266)
T 3uxy_A 143 AG-GGAIVNVASCWGLR------------PGPGHALYCLTKAALASLTQCM 180 (266)
T ss_dssp HT-CEEEEEECCSBTTB------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred cC-CcEEEEECCHHhCC------------CCCCChHHHHHHHHHHHHHHHH
Confidence 34 57999999986542 2224567888888888776654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.5e-05 Score=72.13 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=67.7
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------hhhHHHHHHhhHHHHHHHHHHHHhc---
Q psy16526 307 IKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------DEALKLSVTINMLGTKRLVELCHEM--- 370 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 370 (422)
+.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 73 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~ 146 (260)
T 3gem_A 73 AVALYGDFSCET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTA 146 (260)
T ss_dssp CEEEECCTTSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CeEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 688999999873 333333 368999999997532 1334567999999999999988542
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 147 ~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 184 (260)
T 3gem_A 147 SEVADIVHISDDVTRKG------------SSKHIAYCATKAGLESLTLSF 184 (260)
T ss_dssp SSSCEEEEECCGGGGTC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECChhhcCC------------CCCcHhHHHHHHHHHHHHHHH
Confidence 22568999999765421 223457888888777776654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=2.7e-05 Score=72.77 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=67.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEccccc-C---h----hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATV-K---F----DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~-~---~----~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+. .++|++||+||.. . + .+.++..+++|+.|+.++++++..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 129 (262)
T 1zem_A 56 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 129 (262)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999873 333332 3789999999865 2 1 134566789999999999998865
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..+.... .....|+.+|...+.+.+.+
T Consensus 130 ~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 171 (262)
T 1zem_A 130 QMITQNYGRIVNTASMAGVKGP------------PNMAAYGTSKGAIIALTETA 171 (262)
T ss_dssp HHHHHTCEEEEEECCHHHHSCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcchhhccCC------------CCCchHHHHHHHHHHHHHHH
Confidence 3 124799999997654221 12456788887766665543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.7e-05 Score=72.06 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=68.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----c
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----M 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~ 370 (422)
..+..+.+|+++++ +.+++. .++|++||+||.... .+.++..+++|+.|+.++.+++.. .
T Consensus 61 ~~~~~~~~D~~~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 134 (267)
T 3t4x_A 61 AILQPVVADLGTEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER 134 (267)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEecCCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 46788999999863 334444 378999999997542 134556699999998887776643 3
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 135 ~-~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 171 (267)
T 3t4x_A 135 K-EGRVIFIASEAAIM------------PSQEMAHYSATKTMQLSLSRSL 171 (267)
T ss_dssp T-EEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred C-CCEEEEEcchhhcc------------CCCcchHHHHHHHHHHHHHHHH
Confidence 3 57999999986542 2224567888888877776654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.89 E-value=1.7e-05 Score=73.92 Aligned_cols=98 Identities=10% Similarity=0.132 Sum_probs=69.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (255)
T 4eso_A 54 PRVHALRSDIADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPL 127 (255)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CcceEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999873 33333 2378999999997642 2345667999999999999999763
Q ss_pred C-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- .-.++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 128 ~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 166 (255)
T 4eso_A 128 IREGGSIVFTSSVADEGG------------HPGMSVYSASKAALVSFASVL 166 (255)
T ss_dssp EEEEEEEEEECCGGGSSB------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEECChhhcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 1 1258999999865422 224567888888777776554
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=3.8e-05 Score=71.87 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=69.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (265)
T 3lf2_A 59 ARLFASVCDVLDAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQ 132 (265)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35899999999973 333332 378999999997542 2345667999999999999998542
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.. |......|+.+|...+.+.+.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 173 (265)
T 3lf2_A 133 LESRADAAIVCVNSLLASQ------------PEPHMVATSAARAGVKNLVRSM 173 (265)
T ss_dssp HTTSTTEEEEEEEEGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred hhccCCeEEEEECCcccCC------------CCCCchhhHHHHHHHHHHHHHH
Confidence 1246899999976542 2223567888888777776554
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.7e-05 Score=72.75 Aligned_cols=97 Identities=13% Similarity=0.007 Sum_probs=67.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh---------cCccEEEEcccccC---h-----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK---------QNVSVVFHSAATVK---F-----DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~---------~~~d~ViH~Aa~~~---~-----~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
...++.+|++|++ +++.+. .++|+|||+||... + .+.++..+++|+.|+.++++++.
T Consensus 43 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 116 (236)
T 1ooe_A 43 SNILVDGNKNWTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLAT 116 (236)
T ss_dssp EEEECCTTSCHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEeCCCCCHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4567789998863 333332 37899999999643 1 13445678999999999999987
Q ss_pred hcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- ...++|++||..++. |..+...|+.+|...|.+.+.+
T Consensus 117 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 157 (236)
T 1ooe_A 117 THLKPGGLLQLTGAAAAMG------------PTPSMIGYGMAKAAVHHLTSSL 157 (236)
T ss_dssp HHEEEEEEEEEECCGGGGS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCEEEEECchhhcc------------CCCCcHHHHHHHHHHHHHHHHH
Confidence 631 125899999986542 2234567888888888777654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1.4e-05 Score=76.63 Aligned_cols=87 Identities=14% Similarity=0.195 Sum_probs=64.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++++++++|++.+++++||+ |.++
T Consensus 58 ~~v~~v~~Dl~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~--S~~g 117 (318)
T 2r6j_A 58 LGAIIVKGELDEH------EKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP--SDFG 117 (318)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC--SCCS
T ss_pred CCCEEEEecCCCH------HHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe--eccc
Confidence 4689999999986 467888899999999998642 5678999999998755889985 3333
Q ss_pred ccCCCcccccccCCCCCH-HHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDP-QKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p-~~~y~~~K~~~E~~~~~ 419 (422)
. . .+| ..+..| ...| .+|...|+++++
T Consensus 118 ~--~--~~~---~~~~~p~~~~y-~sK~~~e~~~~~ 145 (318)
T 2r6j_A 118 V--E--EDR---INALPPFEALI-ERKRMIRRAIEE 145 (318)
T ss_dssp S--C--TTT---CCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred c--C--ccc---ccCCCCcchhH-HHHHHHHHHHHh
Confidence 2 1 122 234444 4577 899999988865
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=3.8e-05 Score=73.16 Aligned_cols=97 Identities=5% Similarity=0.038 Sum_probs=68.6
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 82 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 155 (293)
T 3grk_A 82 AFVAGHCDVADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRA 155 (293)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999973 334333 378999999997641 1345567999999999999998
Q ss_pred HhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...- +-.++|++||..+... ...+..|+.+|...+.+.+.+
T Consensus 156 ~~~m~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 197 (293)
T 3grk_A 156 EKLMADGGSILTLTYYGAEKV------------MPNYNVMGVAKAALEASVKYL 197 (293)
T ss_dssp HHHTTTCEEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCEEEEEeehhhccC------------CCchHHHHHHHHHHHHHHHHH
Confidence 7632 2358999999765421 123456778888777766554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.88 E-value=4.2e-05 Score=71.02 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=67.3
Q ss_pred CcEEEEeCcC--CCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDI--TEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl--~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
.++.++.+|+ +|+ ++.+++. .++|++||+||... + .+.++..+++|+.|+.++++++
T Consensus 62 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 135 (252)
T 3f1l_A 62 RQPQWFILDLLTCTS------ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQAL 135 (252)
T ss_dssp CCCEEEECCTTTCCH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEEEEecccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 3678899999 654 2333333 27899999999742 1 1344567999999999999998
Q ss_pred H----hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 H----EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +.+ ..++|++||..+.. +..+...|+.+|...+.+.+.+
T Consensus 136 ~~~m~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~l 179 (252)
T 3f1l_A 136 LPLLLKSD-AGSLVFTSSSVGRQ------------GRANWGAYAASKFATEGMMQVL 179 (252)
T ss_dssp HHHHHTSS-SCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCC-CCEEEEECChhhcc------------CCCCCchhHHHHHHHHHHHHHH
Confidence 4 333 57999999976542 1223457888888777776554
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=97.87 E-value=2.4e-05 Score=72.04 Aligned_cols=100 Identities=14% Similarity=0.039 Sum_probs=67.5
Q ss_pred EEEEeCcCCCCCCCCCHHHHHH---HhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH----hcCC
Q psy16526 307 IKPILGDITEPELGISQNDQKI---LKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH----EMTH 372 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~---~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~ 372 (422)
+.++.+|+++ +-. . ...+. ...++|++||+||.... .+.++..+++|+.|+.++++++. +.+
T Consensus 45 ~~~~~~D~~~-~~~-~-~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~- 120 (239)
T 2ekp_A 45 AVPLPTDLEK-DDP-K-GLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG- 120 (239)
T ss_dssp CEEEECCTTT-SCH-H-HHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred cEEEecCCch-HHH-H-HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence 6788999998 421 1 11122 23479999999997531 13456679999999999999884 334
Q ss_pred CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 373 LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 373 ~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..++|++||..++.... ..+...|+.+|...|.+.+.+
T Consensus 121 ~g~iv~isS~~~~~~~~----------~~~~~~Y~~sK~a~~~~~~~l 158 (239)
T 2ekp_A 121 WGRVLFIGSVTTFTAGG----------PVPIPAYTTAKTALLGLTRAL 158 (239)
T ss_dssp CEEEEEECCGGGTSCCT----------TSCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECchhhccCCC----------CCCCccHHHHHHHHHHHHHHH
Confidence 67999999986653321 123457888888877776554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.7e-05 Score=76.67 Aligned_cols=96 Identities=14% Similarity=0.119 Sum_probs=66.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|+++++ +++.+. .++|+|||+||.... .+..+..+++|+.|+.++++++...
T Consensus 59 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 132 (319)
T 3ioy_A 59 PEVMGVQLDVASRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPR 132 (319)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 37899999999973 334433 367999999997532 1345667999999999999988753
Q ss_pred C---------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 371 T---------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 371 ~---------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
. +..++|++||..+... ......|..+|...+.+.+
T Consensus 133 ~~~~~~~~~~~~g~iV~isS~a~~~~------------~~~~~~Y~aSKaal~~~~~ 177 (319)
T 3ioy_A 133 MVERVKAGEQKGGHVVNTASMAAFLA------------AGSPGIYNTTKFAVRGLSE 177 (319)
T ss_dssp HHHHHHTTSCCCCEEEEECCGGGTCC------------CSSSHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCCCcEEEEecccccccC------------CCCCHHHHHHHHHHHHHHH
Confidence 2 1347999999866532 1123578888885444444
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.4e-05 Score=74.60 Aligned_cols=99 Identities=10% Similarity=0.005 Sum_probs=69.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||... + .+.++..+++|+.|+.++++++..
T Consensus 58 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 131 (259)
T 3edm_A 58 RSALAIKADLTNAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALP 131 (259)
T ss_dssp SCCEEEECCTTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999973 334433 37899999998652 1 134466799999999999999987
Q ss_pred cC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.- +-.++|++||..+... +..+...|+.+|...+.+.+.+
T Consensus 132 ~~~~~g~iv~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 172 (259)
T 3edm_A 132 KMAKGGAIVTFSSQAGRDG-----------GGPGALAYATSKGAVMTFTRGL 172 (259)
T ss_dssp GEEEEEEEEEECCHHHHHC-----------CSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCEEEEEcCHHhccC-----------CCCCcHHHHHHHHHHHHHHHHH
Confidence 42 1238999999865411 2223457888888777776654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.87 E-value=4.9e-05 Score=70.04 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=66.9
Q ss_pred CcEEEEeCcC--CCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDI--TEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl--~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
.+..++.+|+ +++ ++++.+. .++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 64 ~~~~~~~~d~d~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 137 (247)
T 3i1j_A 64 PQPLIIALNLENATA------QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRAL 137 (247)
T ss_dssp CCCEEEECCTTTCCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEEEeccccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 4567788887 554 2333332 378999999997531 1345667999999999999998
Q ss_pred H----hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 H----EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +.+ ..++|++||..+.. +..+...|+.+|...|.+.+.+
T Consensus 138 ~~~~~~~~-~~~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 181 (247)
T 3i1j_A 138 LPLLKRSE-DASIAFTSSSVGRK------------GRANWGAYGVSKFATEGLMQTL 181 (247)
T ss_dssp HHHHTTSS-SEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCC-CCeEEEEcchhhcC------------CCCCcchhHHHHHHHHHHHHHH
Confidence 4 333 57999999976542 1223457888888887776654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=3e-05 Score=73.22 Aligned_cols=97 Identities=11% Similarity=0.084 Sum_probs=69.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
++.++.+|+++++ +++.+. .++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 76 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 149 (280)
T 3nrc_A 76 PAAVLPCDVISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKE 149 (280)
T ss_dssp CSEEEECCTTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999873 333332 367999999997642 133455689999999999999
Q ss_pred HHhc--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... .+..++|++||..+.. |..++..|+.+|...+.+.+.+
T Consensus 150 ~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaal~~~~~~l 193 (280)
T 3nrc_A 150 GRSMMKNRNASMVALTYIGAEK------------AMPSYNTMGVAKASLEATVRYT 193 (280)
T ss_dssp HHHHHTTTTCEEEEEECGGGTS------------CCTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCeEEEEecccccc------------CCCCchhhHHHHHHHHHHHHHH
Confidence 8753 1246899999976542 2234567888888887776654
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.87 E-value=2.6e-05 Score=73.89 Aligned_cols=100 Identities=12% Similarity=0.052 Sum_probs=70.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 56 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 129 (280)
T 3tox_A 56 GGEAAALAGDVGDEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQV 129 (280)
T ss_dssp TCCEEECCCCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 357889999999873 333333 378999999996521 13456679999999999999875
Q ss_pred hc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+..++|++||..++.. +..+...|+.+|...+.+.+.+
T Consensus 130 ~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 173 (280)
T 3tox_A 130 PAIAALGGGSLTFTSSFVGHTA-----------GFAGVAPYAASKAGLIGLVQAL 173 (280)
T ss_dssp HHHHHTTCEEEEEECCSBTTTB-----------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEcChhhCcC-----------CCCCchhHHHHHHHHHHHHHHH
Confidence 42 12469999999765411 2234567888888777776654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=2.3e-05 Score=73.96 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=68.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 77 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 150 (277)
T 4fc7_A 77 RRCLPLSMDVRAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEK 150 (277)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999973 333333 378999999996431 134566799999999999998843
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 151 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 191 (277)
T 4fc7_A 151 FFRDH-GGVIVNITATLGNRG------------QALQVHAGSAKAAVDAMTRHL 191 (277)
T ss_dssp THHHH-CEEEEEECCSHHHHT------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCEEEEECchhhCCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 22 468999999865421 112356778888777766544
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.87 E-value=2.2e-05 Score=73.45 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChhhhHHHHHHhhHHHHHHHH----HHHHhcC--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFDEALKLSVTINMLGTKRLV----ELCHEMT-- 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll----~~a~~~~-- 371 (422)
.++.++.+|++|++ +++.+. .++|+|||+||... .+.++..+++|+.|+.++. +.+++.+
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 2gdz_A 58 QKTLFIQCDVADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG 130 (267)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred CceEEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC
Confidence 46889999999873 334333 35799999999764 3456777899999765554 4444432
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+..++|++||.+++.. ..+...|+.+|...|.+.+.
T Consensus 131 ~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 166 (267)
T 2gdz_A 131 EGGIIINMSSLAGLMP------------VAQQPVYCASKHGIVGFTRS 166 (267)
T ss_dssp CCEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccccCC------------CCCCchHHHHHHHHHHHHHH
Confidence 1478999999876532 11234688888877777654
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=4.6e-05 Score=72.04 Aligned_cols=99 Identities=13% Similarity=0.047 Sum_probs=69.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 75 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 148 (286)
T 3uve_A 75 NRRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGV 148 (286)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357899999999973 334333 378999999997532 13455679999999999999886
Q ss_pred hc----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. ++-.++|++||..+.. +......|+.+|...+.+.+.+
T Consensus 149 ~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 192 (286)
T 3uve_A 149 PHMIAGGRGGSIILTSSVGGLK------------AYPHTGHYVAAKHGVVGLMRAF 192 (286)
T ss_dssp HHHHHHTSCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCcEEEEECchhhcc------------CCCCccHHHHHHHHHHHHHHHH
Confidence 42 2135899999986542 1223457888888777766554
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.2e-05 Score=73.94 Aligned_cols=97 Identities=9% Similarity=0.080 Sum_probs=68.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 77 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 150 (270)
T 3ftp_A 77 LEGRGAVLNVNDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRP 150 (270)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45788999999873 334333 378999999997542 234566799999999999998853
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 151 ~~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 191 (270)
T 3ftp_A 151 MMKAR-GGRIVNITSVVGSAG------------NPGQVNYAAAKAGVAGMTRAL 191 (270)
T ss_dssp HHHHT-CEEEEEECCHHHHHC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CCEEEEECchhhCCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 22 468999999765421 123457888888777666544
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.85 E-value=4.8e-05 Score=71.42 Aligned_cols=97 Identities=8% Similarity=0.107 Sum_probs=68.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++.+++..
T Consensus 53 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 126 (264)
T 3tfo_A 53 GTALAQVLDVTDRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126 (264)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 56889999999973 333332 378999999997542 134566799999999999888753
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 127 m~~~~-~g~IV~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 167 (264)
T 3tfo_A 127 MEAQR-SGQIINIGSIGALSV------------VPTAAVYCATKFAVRAISDGL 167 (264)
T ss_dssp HHHHT-CEEEEEECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCC-CeEEEEEcCHHHccc------------CCCChhHHHHHHHHHHHHHHH
Confidence 23 478999999865421 223457888888777766554
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=4.6e-05 Score=72.66 Aligned_cols=97 Identities=10% Similarity=0.043 Sum_probs=68.4
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 81 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 154 (296)
T 3k31_A 81 VKLTVPCDVSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKA 154 (296)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999973 333333 378999999997642 1345567999999999999999
Q ss_pred HhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...- .-.++|++||..+.. +...+..|+.+|...+.+.+.+
T Consensus 155 ~~~m~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~l 196 (296)
T 3k31_A 155 EPLMTNGGSILTLSYYGAEK------------VVPHYNVMGVCKAALEASVKYL 196 (296)
T ss_dssp GGGCTTCEEEEEEECGGGTS------------CCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCEEEEEEehhhcc------------CCCCchhhHHHHHHHHHHHHHH
Confidence 8642 135899999976542 1223456788888777776654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=3.5e-05 Score=70.56 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=68.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 51 ~~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 124 (235)
T 3l77_A 51 GVEVFYHHLDVSKAE------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD 124 (235)
T ss_dssp CCCEEEEECCTTCHH------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEEeccCCHH------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999973 4444443 78999999997542 234556799999999999999864
Q ss_pred c--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 125 ~~~~~~~~ii~~sS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l 165 (235)
T 3l77_A 125 SLKRTGGLALVTTSDVSARL------------IPYGGGYVSTKWAARALVRTF 165 (235)
T ss_dssp HHHHHTCEEEEECCGGGSSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCcEEEEecchhccc------------CCCcchHHHHHHHHHHHHHHH
Confidence 2 11246777777644311 112357888898888777654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.8e-05 Score=73.35 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=68.8
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
++.++.+|++|++ +++.+. .++|+|||+||... +. +.++..+++|+.|+.++++++..
T Consensus 79 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 152 (297)
T 1xhl_A 79 KINAVVADVTEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE 152 (297)
T ss_dssp GEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eEEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 6889999999873 333333 37899999999643 11 34556799999999999998875
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+ .++|++||..+.... ..+...|+.+|...|.+.+.+
T Consensus 153 ~~~~~~-g~IV~isS~~~~~~~-----------~~~~~~Y~asKaa~~~l~~~l 194 (297)
T 1xhl_A 153 HLIKTK-GEIVNVSSIVAGPQA-----------HSGYPYYACAKAALDQYTRCT 194 (297)
T ss_dssp HHHHTT-CEEEEECCGGGSSSC-----------CTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CEEEEEcCchhccCC-----------CCCcchHHHHHHHHHHHHHHH
Confidence 3 22 699999998654321 023457888888877776654
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=2e-05 Score=80.76 Aligned_cols=73 Identities=29% Similarity=0.387 Sum_probs=57.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcC------ccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQN------VSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~------~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 371 (422)
.++.++.+|++|+ +++..++++ +|+|||+||.... .+..+..+++|+.|+.++.+++++.+
T Consensus 279 ~~v~~~~~Dv~d~------~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~ 352 (486)
T 2fr1_A 279 ARTTVAACDVTDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD 352 (486)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred CEEEEEEeCCCCH------HHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 5789999999987 345666554 4999999997642 13445668899999999999998875
Q ss_pred CCceEEEEeCCcc
Q psy16526 372 HLEALIHVSTAYC 384 (422)
Q Consensus 372 ~~~r~v~~SS~~~ 384 (422)
.++||++||..+
T Consensus 353 -~~~~V~~SS~a~ 364 (486)
T 2fr1_A 353 -LTAFVLFSSFAS 364 (486)
T ss_dssp -CSEEEEEEEHHH
T ss_pred -CCEEEEEcChHh
Confidence 889999999744
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.85 E-value=4.8e-05 Score=72.58 Aligned_cols=98 Identities=10% Similarity=0.025 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 89 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 162 (299)
T 3t7c_A 89 RRIIASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP 162 (299)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57899999999873 333333 378999999997532 134566799999999999998754
Q ss_pred c----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++..++|++||..+.. +......|+.+|...+.+.+.+
T Consensus 163 ~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 205 (299)
T 3t7c_A 163 HIMAGKRGGSIVFTSSIGGLR------------GAENIGNYIASKHGLHGLMRTM 205 (299)
T ss_dssp HHHHTTSCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcEEEEECChhhcc------------CCCCcchHHHHHHHHHHHHHHH
Confidence 2 2246899999976542 1223457888888777766554
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.85 E-value=3.2e-05 Score=73.29 Aligned_cols=99 Identities=12% Similarity=0.156 Sum_probs=69.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 65 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 138 (285)
T 3sc4_A 65 GQALPIVGDIRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH 138 (285)
T ss_dssp SEEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47889999999873 333333 379999999997542 1345567889999999999998764
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... ..+...|+.+|...+.+.+.+
T Consensus 139 m~~~~~g~iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~~~~~l 180 (285)
T 3sc4_A 139 MKGRDNPHILTLSPPIRLEPK-----------WLRPTPYMMAKYGMTLCALGI 180 (285)
T ss_dssp TTTSSSCEEEECCCCCCCSGG-----------GSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECChhhccCC-----------CCCCchHHHHHHHHHHHHHHH
Confidence 124689999997543211 012357888888777766544
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.84 E-value=3e-05 Score=72.08 Aligned_cols=97 Identities=10% Similarity=0.021 Sum_probs=67.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++.+++...
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 125 (253)
T 1hxh_A 52 ERSMFVRHDVSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125 (253)
T ss_dssp TTEEEECCCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 46889999999873 333333 357999999997542 1345667899999888777665321
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ .++|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 126 ~~~~~-g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 165 (253)
T 1hxh_A 126 MKETG-GSIINMASVSSWLP------------IEQYAGYSASKAAVSALTRAA 165 (253)
T ss_dssp HTTTC-EEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CEEEEEcchhhcCC------------CCCCccHHHHHHHHHHHHHHH
Confidence 22 79999999866422 223567888888888777654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.4e-05 Score=72.04 Aligned_cols=97 Identities=9% Similarity=-0.103 Sum_probs=67.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh---------cCccEEEEcccccC---h-----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK---------QNVSVVFHSAATVK---F-----DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~---------~~~d~ViH~Aa~~~---~-----~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
...++.+|++|++ +++.+. .++|++||+||... + .+.++..+++|+.|+.++++++.
T Consensus 47 ~~~~~~~D~~~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~ 120 (241)
T 1dhr_A 47 ASVIVKMTDSFTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLAT 120 (241)
T ss_dssp EEEECCCCSCHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4567889998863 333332 37899999999643 1 13445668999999999999987
Q ss_pred hcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..- .-.++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 121 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 161 (241)
T 1dhr_A 121 KHLKEGGLLTLAGAKAALDG------------TPGMIGYGMAKGAVHQLCQSL 161 (241)
T ss_dssp HHEEEEEEEEEECCGGGGSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCEEEEECCHHHccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 631 1258999999866421 223467888888888777665
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=6e-05 Score=71.60 Aligned_cols=104 Identities=13% Similarity=0.018 Sum_probs=69.1
Q ss_pred CcEEEEeCcCCCCCCCC-----------CHHHHHHHh-------cCccEEEEcccccCh---------------------
Q psy16526 305 AKIKPILGDITEPELGI-----------SQNDQKILK-------QNVSVVFHSAATVKF--------------------- 345 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l-----------~~~~~~~~~-------~~~d~ViH~Aa~~~~--------------------- 345 (422)
.++.++.+|+++++..- ..++++.+. .++|++||+||....
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (291)
T 1e7w_A 60 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 139 (291)
T ss_dssp TCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred CeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 56889999999975000 000223332 378999999997531
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHHhc---CC------CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 346 DEALKLSVTINMLGTKRLVELCHEM---TH------LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 346 ~~~~~~~~~~Nv~gt~~ll~~a~~~---~~------~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
.+.++..+++|+.|+.++++++... .+ ..++|++||..+... ......|+.+|...+.+
T Consensus 140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l 207 (291)
T 1e7w_A 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAKGALEGL 207 (291)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC------------CCCCchhHHHHHHHHHH
Confidence 2334566899999999999988642 12 368999999865421 22345788888877776
Q ss_pred hhhc
Q psy16526 417 VNTL 420 (422)
Q Consensus 417 ~~~~ 420 (422)
.+.+
T Consensus 208 ~~~l 211 (291)
T 1e7w_A 208 TRSA 211 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.4e-05 Score=73.86 Aligned_cols=97 Identities=10% Similarity=0.059 Sum_probs=66.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
++.++.+|++|++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 78 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 151 (276)
T 2b4q_A 78 DCQAIPADLSSEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLL 151 (276)
T ss_dssp CEEECCCCTTSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6888999999873 333333 378999999996532 134567799999999888887753
Q ss_pred --cCC---CceEEEEeCCccccCCCcccccccCCCCCHHH-HHHHHhhCCHHHhhhc
Q psy16526 370 --MTH---LEALIHVSTAYCNCDREEVREIIYSPPYDPQK-IIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~---~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~-~y~~~K~~~E~~~~~~ 420 (422)
.+. ..++|++||..++.... . .. .|+.+|...|.+.+.+
T Consensus 152 ~~~~~~~~~g~iV~isS~~~~~~~~---------~---~~~~Y~asK~a~~~~~~~l 196 (276)
T 2b4q_A 152 RRSASAENPARVINIGSVAGISAMG---------E---QAYAYGPSKAALHQLSRML 196 (276)
T ss_dssp HHHCCSSSCEEEEEECCGGGTCCCC---------C---SCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCEEEEECCHHHcCCCC---------C---CccccHHHHHHHHHHHHHH
Confidence 231 27999999986643211 1 12 5777787777766544
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.83 E-value=5.3e-05 Score=73.43 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=69.6
Q ss_pred CcEEEEeCcCCCCCCCC-----------CHHHHHHHh-------cCccEEEEcccccCh---------------------
Q psy16526 305 AKIKPILGDITEPELGI-----------SQNDQKILK-------QNVSVVFHSAATVKF--------------------- 345 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l-----------~~~~~~~~~-------~~~d~ViH~Aa~~~~--------------------- 345 (422)
.++.++.+|++|++..- +..+++.+. .++|++||+||....
T Consensus 97 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~ 176 (328)
T 2qhx_A 97 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 176 (328)
T ss_dssp TCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHH
T ss_pred CeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 46889999999975000 000233332 378999999997531
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHHhc---CC------CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 346 DEALKLSVTINMLGTKRLVELCHEM---TH------LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 346 ~~~~~~~~~~Nv~gt~~ll~~a~~~---~~------~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
.+.++..+++|+.|+.++++++... .+ ..++|++||..+.. |..+...|+.+|...+.+
T Consensus 177 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaal~~l 244 (328)
T 2qhx_A 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ------------PLLGYTIYTMAKGALEGL 244 (328)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhcc------------CCCCcHHHHHHHHHHHHH
Confidence 2334566899999999999988642 12 46899999986542 222356788888887777
Q ss_pred hhhc
Q psy16526 417 VNTL 420 (422)
Q Consensus 417 ~~~~ 420 (422)
.+.+
T Consensus 245 ~~~l 248 (328)
T 2qhx_A 245 TRSA 248 (328)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.4e-05 Score=81.62 Aligned_cols=100 Identities=18% Similarity=0.375 Sum_probs=69.3
Q ss_pred CCCEEEEccceeeeccC----CCccccccCCCCccccccccccceee-EEeec------CCcccccchhHHHHHHHHHHH
Q psy16526 8 NLPVAIVRPSIVISSVN----EPVAGWVDNYNGPTGIIAAAGKGFFR-TMLCH------ENKVADLVPVDIVINLMICAA 76 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~----eP~pGWidn~~g~~g~~~~~g~G~lr-~~~~~------~~~~~DiVPvD~vvn~~i~aa 76 (422)
++|++|+||+.|.+..+ .+..+|+..+ +......|... .++++ .+...|.||||.|+++++.++
T Consensus 268 gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l-----~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~ 342 (478)
T 4dqv_A 268 ALPVAVFRCGMILADTSYAGQLNMSDWVTRM-----VLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLG 342 (478)
T ss_dssp CCCEEEEEECEEECCSSSSSCCCTTBHHHHH-----HHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHH
T ss_pred CCCeEEEECceeeCCCccCCcCCHHHHHHHH-----HHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHH
Confidence 79999999999988533 2344555433 11122345442 33333 278899999999999998887
Q ss_pred HHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHH
Q psy16526 77 WKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFES 117 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~ 117 (422)
...... ......+||++++..+|+||.++.+.+.++
T Consensus 343 ~~~~~~-----~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 343 ARVAGS-----SLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp HTTC-C-----CCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred hhcccC-----CCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 653321 123467999999877889999999999885
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.3e-05 Score=71.77 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=64.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh---h---hhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF---D---EALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~---~---~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... . +.++..+++|+.|+.++++++..
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 132 (250)
T 3nyw_A 59 QEPIVLPLDITDCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIM 132 (250)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcceEEeccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999873 333332 378999999997532 1 34556799999999999998843
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ..+ ...|+.+|...+.+.+.+
T Consensus 133 ~~~~-~g~iv~isS~~~~~~---------~~~---~~~Y~asKaa~~~l~~~l 172 (250)
T 3nyw_A 133 KVQK-NGYIFNVASRAAKYG---------FAD---GGIYGSTKFALLGLAESL 172 (250)
T ss_dssp HHHT-CEEEEEECC----------------CC---TTHHHHHHHHHHHHHHHH
T ss_pred HhCC-CeEEEEEccHHhcCC---------CCC---CcchHHHHHHHHHHHHHH
Confidence 33 579999999754321 112 446777887776666543
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=4.6e-05 Score=70.94 Aligned_cols=102 Identities=14% Similarity=0.075 Sum_probs=68.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-----Ccc--EEEEcccccCh----------hhhHHHHHHhhHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-----NVS--VVFHSAATVKF----------DEALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-----~~d--~ViH~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a 367 (422)
.++.++.+|++|++-. ++-.+.+.+ ++| ++||+||.... .+.++..+++|+.|+.++++++
T Consensus 60 ~~~~~~~~Dv~~~~~v--~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 137 (259)
T 1oaa_A 60 LKVVLAAADLGTEAGV--QRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGT 137 (259)
T ss_dssp SEEEEEECCTTSHHHH--HHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CeEEEEecCCCCHHHH--HHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999987311 011222222 467 99999997421 1345567999999999999998
Q ss_pred HhcC-----CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMT-----HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~-----~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...- +..++|++||..+.. |..+...|+.+|...|.+.+.+
T Consensus 138 ~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 183 (259)
T 1oaa_A 138 LNAFQDSPGLSKTVVNISSLCALQ------------PYKGWGLYCAGKAARDMLYQVL 183 (259)
T ss_dssp HHTSCCCTTCEEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCceEEEEcCchhcC------------CCCCccHHHHHHHHHHHHHHHH
Confidence 7531 135799999986642 2223567888888888776654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.82 E-value=3.5e-05 Score=72.17 Aligned_cols=97 Identities=15% Similarity=0.087 Sum_probs=68.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 125 (263)
T 2a4k_A 52 AEAIAVVADVSDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV 125 (263)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999873 333333 367999999997542 1334567899999999999998764
Q ss_pred C-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- +..++|++||..+++. .+...|+.+|...+.+.+.+
T Consensus 126 ~~~~g~iv~isS~~~~~~-------------~~~~~Y~asK~a~~~~~~~l 163 (263)
T 2a4k_A 126 LEEGGSLVLTGSVAGLGA-------------FGLAHYAAGKLGVVGLARTL 163 (263)
T ss_dssp CCTTCEEEEECCCTTCCH-------------HHHHHHHHCSSHHHHHHHHH
T ss_pred HhcCCEEEEEecchhcCC-------------CCcHHHHHHHHHHHHHHHHH
Confidence 1 1358999999876511 13567888888776665543
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=97.80 E-value=4.2e-05 Score=70.82 Aligned_cols=93 Identities=12% Similarity=0.095 Sum_probs=63.2
Q ss_pred EEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----c
Q psy16526 309 PILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----M 370 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~ 370 (422)
.+.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++.. .
T Consensus 57 ~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 130 (247)
T 1uzm_A 57 GVEVDVTDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 130 (247)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred CeeccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 4789999863 333333 368999999997542 134566799999999999998864 3
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ ..++|++||..+... ..+...|+.+|...|.+.+.+
T Consensus 131 ~-~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 167 (247)
T 1uzm_A 131 K-FGRMIFIGSVSGLWG------------IGNQANYAASKAGVIGMARSI 167 (247)
T ss_dssp T-CEEEEEECCCCC-----------------CCHHHHHHHHHHHHHHHHH
T ss_pred C-CCEEEEECCHhhccC------------CCCChhHHHHHHHHHHHHHHH
Confidence 3 679999999855321 112456788888777666543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.80 E-value=6.3e-05 Score=71.22 Aligned_cols=102 Identities=10% Similarity=0.065 Sum_probs=67.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC---h------h--------hhHHHHHHhhHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK---F------D--------EALKLSVTINMLGT 360 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~---~------~--------~~~~~~~~~Nv~gt 360 (422)
.++.++.+|++|++.. +++++.+. .++|++||+||... + . +.++..+++|+.|+
T Consensus 74 ~~~~~~~~Dv~~~~~~--~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 151 (288)
T 2x9g_A 74 NTAVVCQADLTNSNVL--PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAP 151 (288)
T ss_dssp TCEEEEECCCSCSTTH--HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHH
T ss_pred CceEEEEeecCCccCC--HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHH
Confidence 5688999999993210 12333333 37899999999643 1 1 23345689999999
Q ss_pred HHHHHHHHhcC---C------CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 361 KRLVELCHEMT---H------LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 361 ~~ll~~a~~~~---~------~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++++++...- + ..++|++||..+.. |..+...|+.+|...+.+.+.+
T Consensus 152 ~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 208 (288)
T 2x9g_A 152 FLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQ------------PCMAFSLYNMGKHALVGLTQSA 208 (288)
T ss_dssp HHHHHHHHHHC--------CCCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccC------------CCCCCchHHHHHHHHHHHHHHH
Confidence 99999886531 1 35899999986542 2223457888887777666543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.9e-05 Score=72.54 Aligned_cols=97 Identities=12% Similarity=0.060 Sum_probs=68.0
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh------------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF------------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
++.++.+|++|++ +.+.++ .++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 65 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 138 (271)
T 3ek2_A 65 SELVFPCDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKA 138 (271)
T ss_dssp CCCEEECCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred CcEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHH
Confidence 4788999999873 334443 268999999997542 134556799999999999999
Q ss_pred HHhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+...- +-.++|++||..+... ..+...|+.+|...+.+.+.+
T Consensus 139 ~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 181 (271)
T 3ek2_A 139 ALPMLSDDASLLTLSYLGAERA------------IPNYNTMGLAKAALEASVRYL 181 (271)
T ss_dssp HGGGEEEEEEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCceEEEEeccccccC------------CCCccchhHHHHHHHHHHHHH
Confidence 97641 1248999999765421 223456778888777776654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=97.79 E-value=3.9e-05 Score=71.97 Aligned_cols=97 Identities=11% Similarity=0.074 Sum_probs=68.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc----------CccEEEEcccccC--------h----hhhHHHHHHhhHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ----------NVSVVFHSAATVK--------F----DEALKLSVTINMLGTKR 362 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~----------~~d~ViH~Aa~~~--------~----~~~~~~~~~~Nv~gt~~ 362 (422)
.++.++.+|++|++ +++.+.+ ++|++||+||... + .+.++..+++|+.|+.+
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 129 (269)
T 2h7i_A 56 AKAPLLELDVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYAS 129 (269)
T ss_dssp SCCCEEECCTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred CCceEEEccCCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHH
Confidence 45788999999873 3343332 7999999999754 1 13445668999999999
Q ss_pred HHHHHHhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 363 LVELCHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 363 ll~~a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++++...- .-.++|++||..+. +...+..|+.+|...+.+.+.+
T Consensus 130 l~~~~~~~~~~~g~iv~iss~~~~-------------~~~~~~~Y~asKaa~~~l~~~l 175 (269)
T 2h7i_A 130 MAKALLPIMNPGGSIVGMDFDPSR-------------AMPAYNWMTVAKSALESVNRFV 175 (269)
T ss_dssp HHHHHGGGEEEEEEEEEEECCCSS-------------CCTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCeEEEEcCcccc-------------ccCchHHHHHHHHHHHHHHHHH
Confidence 999997631 12589999986432 1223567888888887776654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.79 E-value=5e-05 Score=71.53 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=69.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 72 ~~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 145 (277)
T 3tsc_A 72 NRRIVAAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAP 145 (277)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 357889999999873 333333 368999999997642 134566799999999999998654
Q ss_pred c----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++-.++|++||..+... ......|+.+|...+.+.+.+
T Consensus 146 ~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 188 (277)
T 3tsc_A 146 RIIEGGRGGSIILISSAAGMKM------------QPFMIHYTASKHAVTGLARAF 188 (277)
T ss_dssp HHHHHTSCEEEEEECCGGGTSC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEEccHhhCCC------------CCCchhhHHHHHHHHHHHHHH
Confidence 2 21358999999865421 122456888888777776654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.79 E-value=3e-05 Score=72.27 Aligned_cols=97 Identities=19% Similarity=0.131 Sum_probs=68.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
+.+.++.+|++|++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 59 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 132 (253)
T 2nm0_A 59 EGFLAVKCDITDTE------QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRA 132 (253)
T ss_dssp TTSEEEECCTTSHH------HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34788999999873 333333 357999999997532 134567789999999999988754
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ ..++|++||..+... ......|+.+|...|.+.+.+
T Consensus 133 m~~~~-~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 173 (253)
T 2nm0_A 133 MLRAK-KGRVVLISSVVGLLG------------SAGQANYAASKAGLVGFARSL 173 (253)
T ss_dssp HHHHT-CEEEEEECCCCCCCC------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCEEEEECchhhCCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 23 579999999765321 123567888888877776654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.78 E-value=2e-05 Score=76.10 Aligned_cols=98 Identities=10% Similarity=-0.010 Sum_probs=68.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 86 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 159 (322)
T 3qlj_A 86 GEAVADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAY 159 (322)
T ss_dssp CEEEEECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56889999999873 333333 278999999997642 1345667999999999999988642
Q ss_pred C---------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T---------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~---------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
- .-.++|++||..+... ......|+.+|...+.+.+.+
T Consensus 160 ~~~~~~~~~~~~g~IV~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 206 (322)
T 3qlj_A 160 WRGLSKAGKAVDGRIINTSSGAGLQG------------SVGQGNYSAAKAGIATLTLVG 206 (322)
T ss_dssp HHHHHHTTCCCCEEEEEECCHHHHHC------------BTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHccccCCCCCcEEEEEcCHHHccC------------CCCCccHHHHHHHHHHHHHHH
Confidence 1 0148999999755421 113457888888877776654
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.77 E-value=4.6e-05 Score=71.59 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=69.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 77 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 150 (267)
T 3u5t_A 77 GKALTAQADVSDPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR 150 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999873 333333 378999999997542 1335567889999999999988753
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-.++|++||..+... ......|+.+|...+.+.+.+
T Consensus 151 ~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 189 (267)
T 3u5t_A 151 LRVGGRIINMSTSQVGLL------------HPSYGIYAAAKAGVEAMTHVL 189 (267)
T ss_dssp EEEEEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCeEEEEeChhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 11258999999755321 113457888888887776654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.77 E-value=7e-05 Score=70.86 Aligned_cols=97 Identities=13% Similarity=0.145 Sum_probs=67.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.+.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++.+++...
T Consensus 84 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 157 (281)
T 4dry_A 84 IVRAVVCDVGDPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRM 157 (281)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4689999999973 333333 368999999997432 1345567999999998888877542
Q ss_pred ----C-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ----T-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ----~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+ +..++|++||..+.. +..+...|+.+|...+.+.+.+
T Consensus 158 ~~~~~~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 200 (281)
T 4dry_A 158 MKAQTPRGGRIINNGSISAQT------------PRPNSAPYTATKHAITGLTKST 200 (281)
T ss_dssp HHHSSSCCEEEEEECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcEEEEECCHHhCC------------CCCCChhHHHHHHHHHHHHHHH
Confidence 1 135899999976531 2234567888888877776654
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.77 E-value=4.8e-05 Score=72.43 Aligned_cols=74 Identities=14% Similarity=0.226 Sum_probs=54.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc-------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ-------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~-------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 71 ~~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 144 (303)
T 1yxm_A 71 QARVIPIQCNIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS 144 (303)
T ss_dssp CCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CccEEEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357899999999873 3344332 68999999995431 134556789999999999999865
Q ss_pred c---CCCceEEEEeCCc
Q psy16526 370 M---THLEALIHVSTAY 383 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~ 383 (422)
. .+..++|++||..
T Consensus 145 ~~~~~~~~~iv~isS~~ 161 (303)
T 1yxm_A 145 SWMKEHGGSIVNIIVPT 161 (303)
T ss_dssp HTHHHHCEEEEEECCCC
T ss_pred HHHHhcCCeEEEEEeec
Confidence 2 1146899999976
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.75 E-value=4.6e-05 Score=71.63 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=67.1
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
++.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 55 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 128 (270)
T 1yde_A 55 GAVFILCDVTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY 128 (270)
T ss_dssp TEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4788999999873 334433 378999999997531 1335667899999999999998641
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... .....|+.+|...|.+.+.+
T Consensus 129 ~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~l 168 (270)
T 1yde_A 129 LRKSQGNVINISSLVGAIGQ------------AQAVPYVATKGAVTAMTKAL 168 (270)
T ss_dssp HHHHTCEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEcCccccCCC------------CCCcccHHHHHHHHHHHHHH
Confidence 013699999997543111 12356888888887776654
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=4e-05 Score=72.51 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=68.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChh------------hhHHHHHHhhHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFD------------EALKLSVTINMLGTKRLV 364 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll 364 (422)
..++.++.+|+++++ +.+.+. .++|++||+||..... +.++..+++|+.|+.+++
T Consensus 50 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~ 123 (281)
T 3zv4_A 50 GGNAVGVVGDVRSLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAV 123 (281)
T ss_dssp BTTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHH
T ss_pred CCcEEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHH
Confidence 357899999999873 333332 3789999999975321 124566889999999999
Q ss_pred HHHHhcC--CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHEMT--HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~~~--~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++...- +-.++|++||..+.. |......|+.+|...+.+.+.+
T Consensus 124 ~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~l 169 (281)
T 3zv4_A 124 KACLPALVSSRGSVVFTISNAGFY------------PNGGGPLYTATKHAVVGLVRQM 169 (281)
T ss_dssp HHHHHHHHHHTCEEEEECCGGGTS------------SSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEecchhcc------------CCCCCchhHHHHHHHHHHHHHH
Confidence 9986421 125899999976542 1223456888888877776654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=5.5e-06 Score=80.39 Aligned_cols=92 Identities=9% Similarity=0.012 Sum_probs=62.3
Q ss_pred HHHHhcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCC-ceEEEEeCCccccCCCcccccccCCCCCHH
Q psy16526 326 QKILKQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHL-EALIHVSTAYCNCDREEVREIIYSPPYDPQ 403 (422)
Q Consensus 326 ~~~~~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~ 403 (422)
+...++++|+|||+||..+.. .+..+.++.|+.+|+++++++++.++. .+++++|+.... ..++.++. ..+..|.
T Consensus 74 ~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~--~~~~~~~~-~~~~~p~ 150 (327)
T 1y7t_A 74 PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT--NALIAYKN-APGLNPR 150 (327)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH--HHHHHHHT-CTTSCGG
T ss_pred hHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhh--hHHHHHHH-cCCCChh
Confidence 356678999999999987643 456678999999999999999986313 377777764210 01222221 1134556
Q ss_pred HHHHHHhhCCHHHhhhc
Q psy16526 404 KIIETMEWMDDSLVNTL 420 (422)
Q Consensus 404 ~~y~~~K~~~E~~~~~~ 420 (422)
..|+.+|+..|+++..+
T Consensus 151 ~~yg~tkl~~er~~~~~ 167 (327)
T 1y7t_A 151 NFTAMTRLDHNRAKAQL 167 (327)
T ss_dssp GEEECCHHHHHHHHHHH
T ss_pred heeccchHHHHHHHHHH
Confidence 66778888888876543
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.74 E-value=6.4e-05 Score=69.49 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=64.5
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc--
Q psy16526 307 IKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM-- 370 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 370 (422)
+.++.+|++|++ +++.+. .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 51 ~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 124 (245)
T 1uls_A 51 AHPVVMDVADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR 124 (245)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 678899999873 333333 358999999997542 1345667899999999999888652
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+..++|++||....+. | ....|..+|...+.+.+.
T Consensus 125 ~~~~g~iv~isS~~~~~~-----------~--~~~~Y~asK~a~~~~~~~ 161 (245)
T 1uls_A 125 EKNPGSIVLTASRVYLGN-----------L--GQANYAASMAGVVGLTRT 161 (245)
T ss_dssp TTCCEEEEEECCGGGGCC-----------T--TCHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEccchhcCC-----------C--CchhHHHHHHHHHHHHHH
Confidence 22579999999762211 1 234677777766665544
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=97.71 E-value=4.9e-05 Score=70.54 Aligned_cols=96 Identities=7% Similarity=0.022 Sum_probs=66.4
Q ss_pred EEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC--------hhhhHHHHHHhhHHHHHHHHHHHHhcC-
Q psy16526 308 KPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK--------FDEALKLSVTINMLGTKRLVELCHEMT- 371 (422)
Q Consensus 308 ~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~~- 371 (422)
..+..|++|+ ++++.+. .++|+|||+||... ..+.++..+++|+.|+.++++++...-
T Consensus 62 ~~~~~d~~d~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 135 (251)
T 3orf_A 62 HSFTIKDSGE------EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLN 135 (251)
T ss_dssp EEEECSCSSH------HHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cceEEEeCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence 3567787775 3334433 25799999999642 123455678999999999999997642
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhcC
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~~ 421 (422)
.-.++|++||..+.. |..+...|+.+|...|.+.+.+.
T Consensus 136 ~~g~iv~isS~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la 173 (251)
T 3orf_A 136 QGGLFVLTGASAALN------------RTSGMIAYGATKAATHHIIKDLA 173 (251)
T ss_dssp EEEEEEEECCGGGGS------------CCTTBHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEEechhhcc------------CCCCCchhHHHHHHHHHHHHHHH
Confidence 124899999986542 22345678889988888877653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00012 Score=67.85 Aligned_cols=96 Identities=11% Similarity=0.085 Sum_probs=62.1
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHH----HHhcCCCc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVEL----CHEMTHLE 374 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~ 374 (422)
++.++ +|+ ..+ -+.+.+...++|+|||+||.... .+.++..+++|+.|+.++.++ +++.+ ..
T Consensus 61 ~~~~~-~D~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g 133 (249)
T 1o5i_A 61 HRYVV-CDL-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WG 133 (249)
T ss_dssp SEEEE-CCT-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred CeEEE-eeH-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-Cc
Confidence 46677 999 221 12222333489999999996542 134556789999997766554 44444 68
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|++||..++.. ..+...|+.+|...+.+.+.+
T Consensus 134 ~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 167 (249)
T 1o5i_A 134 RIVAITSFSVISP------------IENLYTSNSARMALTGFLKTL 167 (249)
T ss_dssp EEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcchHhcCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 9999999876532 123457778888777666543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.69 E-value=6.5e-05 Score=68.31 Aligned_cols=91 Identities=8% Similarity=-0.031 Sum_probs=63.1
Q ss_pred CcCCCCCCCCCHHHHHHHh---cCccEEEEcccccC--------hhhhHHHHHHhhHHHHHHHHHHHHhcC-CCceEEEE
Q psy16526 312 GDITEPELGISQNDQKILK---QNVSVVFHSAATVK--------FDEALKLSVTINMLGTKRLVELCHEMT-HLEALIHV 379 (422)
Q Consensus 312 gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v~~ 379 (422)
+|++|+ ++++++. .++|++||+||... ..+.++..+++|+.|+.++++++...- +-.++|++
T Consensus 42 ~D~~~~------~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~ 115 (223)
T 3uce_A 42 LDISDE------KSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT 115 (223)
T ss_dssp CCTTCH------HHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCH------HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence 677765 3444444 47899999999752 113455679999999999999998642 12489999
Q ss_pred eCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||..+.. |..+...|+.+|...|.+.+.+
T Consensus 116 sS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l 144 (223)
T 3uce_A 116 SGMLSRK------------VVANTYVKAAINAAIEATTKVL 144 (223)
T ss_dssp CCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred cchhhcc------------CCCCchHHHHHHHHHHHHHHHH
Confidence 9976542 2223457888888777776654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.67 E-value=4.9e-05 Score=71.57 Aligned_cols=100 Identities=9% Similarity=0.068 Sum_probs=69.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++.+++...
T Consensus 62 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 135 (274)
T 3e03_A 62 GQGLALKCDIREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH 135 (274)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence 57889999999873 333332 378999999997531 1345567899999999999998541
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+..++|++||..+.... +..+...|+.+|...+.+.+.+
T Consensus 136 m~~~~~g~iv~isS~~~~~~~----------~~~~~~~Y~asKaal~~l~~~l 178 (274)
T 3e03_A 136 LLQAPNPHILTLAPPPSLNPA----------WWGAHTGYTLAKMGMSLVTLGL 178 (274)
T ss_dssp HTTSSSCEEEECCCCCCCCHH----------HHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEECChHhcCCC----------CCCCCchHHHHHHHHHHHHHHH
Confidence 124689999997543210 0223457888888777776654
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.66 E-value=7.4e-05 Score=69.10 Aligned_cols=98 Identities=10% Similarity=0.057 Sum_probs=68.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc-------------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ-------------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLV 364 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~-------------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll 364 (422)
.++.++.+|+++.+ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.+++
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 130 (255)
T 3icc_A 57 GSAFSIGANLESLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFII 130 (255)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred CceEEEecCcCCHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHH
Confidence 56889999999863 2222221 38999999997532 1334566899999999999
Q ss_pred HHHHhc-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++... .+..++|++||..+... ......|+.+|...+.+.+.+
T Consensus 131 ~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 175 (255)
T 3icc_A 131 QQALSRLRDNSRIINISSAATRIS------------LPDFIAYSMTKGAINTMTFTL 175 (255)
T ss_dssp HHHTTTEEEEEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEeCChhhccC------------CCCcchhHHhHHHHHHHHHHH
Confidence 999764 11358999999765422 223467888888877776654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.64 E-value=3.5e-05 Score=72.12 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=63.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 62 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 135 (262)
T 3ksu_A 62 GAKVALYQSDLSNEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAK 135 (262)
T ss_dssp TCEEEEEECCCCSHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 357899999999973 334433 378999999997532 134556789999999999999986
Q ss_pred c-CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M-THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+..++|++||..+..... . ...|+.+|...+.+.+.+
T Consensus 136 ~m~~~g~iv~isS~~~~~~~~---------~---~~~Y~asKaa~~~l~~~l 175 (262)
T 3ksu_A 136 HMNPNGHIITIATSLLAAYTG---------F---YSTYAGNKAPVEHYTRAA 175 (262)
T ss_dssp TEEEEEEEEEECCCHHHHHHC---------C---CCC-----CHHHHHHHHH
T ss_pred hhcCCCEEEEEechhhccCCC---------C---CchhHHHHHHHHHHHHHH
Confidence 4 1136899999985543210 1 124666666666555443
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=97.58 E-value=5.3e-07 Score=88.69 Aligned_cols=171 Identities=12% Similarity=0.028 Sum_probs=100.0
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccc-cccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAA-AGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~-~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.+....|. .++....++. ...|. .....+++...+.|+||-|+++++.++....
T Consensus 121 ~g~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~----- 188 (369)
T 3st7_A 121 YGNTVYIYRWPNLFGKWCKPN------YNSVIATFCYKIARNE-EIQVNDRNVELTLNYVDDIVAEIKRAIEGTP----- 188 (369)
T ss_dssp HCCCEEEEEECEEECTTCCTT------SSCHHHHHHHHHHTTC-CCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC-----
T ss_pred hCCCEEEEECCceeCCCCCCC------cchHHHHHHHHHHcCC-CeEecCCCeEEEEEEHHHHHHHHHHHHhCCc-----
Confidence 469999999999999877652 2233222221 22232 2223578899999999999999888773221
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCCCCCccccCccccccCHHHHHHHHHHHhhhhHHHHHHHHHHcCC
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNPLSHITWYPDGQCRSNPISNAMCVFLLHRLPAHVLDLFSLLTGK 165 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~~d~~~~l~g~ 165 (422)
.....+||++++ .++||+|+.+.+.+...... .+..|.. .......+...++.++|..-++..+...+.
T Consensus 189 ---~~~~~~~~i~~~--~~~s~~e~~~~~~~~~g~~~---~~~~~~~---~~~~~~~l~~~~l~~~p~~~~~~~l~~~~D 257 (369)
T 3st7_A 189 ---TIENGVPTVPNV--FKVTLGEIVDLLYKFKQSRL---DRTLPKL---DNLFEKDLYSTYLSYLPSTDFSYPLLMNVD 257 (369)
T ss_dssp ---CEETTEECCSCC--EEEEHHHHHHHHHHHHHHHH---HTCCCCT---TSHHHHHHHHHHHHTSCTTCSCCCCCEEEE
T ss_pred ---ccCCceEEeCCC--CceeHHHHHHHHHHHhCCCc---ccccCCC---CCHHHHHHHHHHhcccCCcceeechhhccC
Confidence 111569999887 78999999999988654321 1222222 233333444444566675543333322222
Q ss_pred c----hHHHHHHHHHHHHHHhhhccccceEEEecccHHH
Q psy16526 166 K----PFMVRIQNKLDKAAKCLEYFSTQEWRFLDDNVRE 200 (422)
Q Consensus 166 k----p~~~k~~~ki~~~~~~~~~F~~~~w~F~~~n~~~ 200 (422)
. ..+.+...+........++++.+.|+|.+.|.+.
T Consensus 258 ~rg~f~e~~~~~~~~q~~ls~~~~g~~rg~h~h~~~~e~ 296 (369)
T 3st7_A 258 DRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEK 296 (369)
T ss_dssp TTEEEEEEEECSSSCEEEEEEECTTCEEEEEECSSCCEE
T ss_pred CCcceeEEEecCCCceEEEEEecCCceeccccccCcceE
Confidence 1 1111111122222345678899999998876543
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=69.21 Aligned_cols=99 Identities=8% Similarity=-0.060 Sum_probs=67.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEccc-ccCh------------hhhHHHHHHhhHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAA-TVKF------------DEALKLSVTINMLGTKRLV 364 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa-~~~~------------~~~~~~~~~~Nv~gt~~ll 364 (422)
..++.++.+|++|++ +++.+.+ ++|++||+|| .... .+.++..+++|+.|+.+++
T Consensus 75 ~~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 148 (281)
T 3ppi_A 75 GNRAEFVSTNVTSED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVA 148 (281)
T ss_dssp CTTEEEEECCTTCHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHH
T ss_pred CCceEEEEcCCCCHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHH
Confidence 357899999999873 3343332 6799999954 3211 1235667999999999999
Q ss_pred HHHHhc---------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHEM---------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~~---------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++... ++-.++|++||..+.. +......|+.+|...+.+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 201 (281)
T 3ppi_A 149 RLVAASIAAAEPRENGERGALVLTASIAGYE------------GQIGQTAYAAAKAGVIGLTIAA 201 (281)
T ss_dssp HHHHHHHHTSCCCTTSCCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccCCCeEEEEEecccccC------------CCCCCcccHHHHHHHHHHHHHH
Confidence 988631 1235899999986542 1223567888888777666543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00017 Score=73.83 Aligned_cols=95 Identities=19% Similarity=0.199 Sum_probs=68.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEccccc-Ch-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATV-KF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +++.+++ .+|+|||+||.. .. .+..+..+++|+.|+.++.++++..
T Consensus 292 ~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~ 365 (496)
T 3mje_A 292 VRVTIAACDAADRE------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL 365 (496)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 57899999999973 4455543 479999999976 21 1345567999999999999999887
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
+ ..+||++||..+.-.. .....|+.+|...+.+.+
T Consensus 366 ~-~~~iV~~SS~a~~~g~------------~g~~~YaAaKa~ldala~ 400 (496)
T 3mje_A 366 D-LDAFVLFSSGAAVWGS------------GGQPGYAAANAYLDALAE 400 (496)
T ss_dssp C-CSEEEEEEEHHHHTTC------------TTCHHHHHHHHHHHHHHH
T ss_pred C-CCEEEEEeChHhcCCC------------CCcHHHHHHHHHHHHHHH
Confidence 5 7899999997543111 123567777776666554
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.49 E-value=4.1e-05 Score=70.61 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=58.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhcC--CCce
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEMT--HLEA 375 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~r 375 (422)
.++.++.+|++++...-...+......++|++||+||..... +.++..+++|+.|+.++++++...- +-.+
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~ 127 (245)
T 3e9n_A 48 EGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGC 127 (245)
T ss_dssp TTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe
Confidence 468899999977521000000011123789999999976422 2345668999999888888775310 0158
Q ss_pred EEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+|++||..++.. ..+...|+.+|...|.+.+.+
T Consensus 128 iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 160 (245)
T 3e9n_A 128 VIYINSGAGNGP------------HPGNTIYAASKHALRGLADAF 160 (245)
T ss_dssp EEEEC----------------------CHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCcccccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 999999866532 223467888888888777654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00033 Score=72.30 Aligned_cols=98 Identities=21% Similarity=0.146 Sum_probs=69.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 371 (422)
.++.++.+|++|+ ++++.+++ .+|+|||+||.... .+..+..+++|+.|+.++.+++....
T Consensus 315 ~~v~~~~~Dvtd~------~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~ 388 (525)
T 3qp9_A 315 ATATVVTCDLTDA------EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAA 388 (525)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCCCH------HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5789999999997 34555554 46999999997542 13455678999999999999998753
Q ss_pred C----CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 H----LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~----~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ..+||++||..+.... .....|+.+|...+.+...+
T Consensus 389 ~~~~~~~~iV~~SS~a~~~g~------------~g~~~YaaaKa~l~~lA~~~ 429 (525)
T 3qp9_A 389 AAGGRPPVLVLFSSVAAIWGG------------AGQGAYAAGTAFLDALAGQH 429 (525)
T ss_dssp ----CCCEEEEEEEGGGTTCC------------TTCHHHHHHHHHHHHHHTSC
T ss_pred ccCCCCCEEEEECCHHHcCCC------------CCCHHHHHHHHHHHHHHHHH
Confidence 1 5789999997553211 12456888888777665543
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00022 Score=66.35 Aligned_cols=100 Identities=9% Similarity=-0.029 Sum_probs=65.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH----hcCccEEEEccc--cc--------Ch----hhhHHHHHHhhHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL----KQNVSVVFHSAA--TV--------KF----DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~----~~~~d~ViH~Aa--~~--------~~----~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++.++.+|++|++-. +.-.+.+ ..++|++||+|| .. .+ .+.++..+++|+.|+.++.++
T Consensus 54 ~~~~~~~~Dv~~~~~v--~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 131 (260)
T 2qq5_A 54 GQCVPVVCDSSQESEV--RSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVY 131 (260)
T ss_dssp SEEEEEECCTTSHHHH--HHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHH
T ss_pred CceEEEECCCCCHHHH--HHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHH
Confidence 4688999999987311 0011222 236799999994 22 11 134556789999999888777
Q ss_pred HH----hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CH----EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+. +.+ ..++|++||..+... . +...|+.+|...|.+.+.+
T Consensus 132 ~~~~~~~~~-~g~iv~isS~~~~~~----------~---~~~~Y~asK~a~~~~~~~l 175 (260)
T 2qq5_A 132 GARLMVPAG-QGLIVVISSPGSLQY----------M---FNVPYGVGKAACDKLAADC 175 (260)
T ss_dssp HHHHHGGGT-CCEEEEECCGGGTSC----------C---SSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcC-CcEEEEEcChhhcCC----------C---CCCchHHHHHHHHHHHHHH
Confidence 64 333 579999999865421 1 2357888888888776654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00023 Score=72.09 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=66.7
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHh-------cC-ccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 306 KIKPILGDITEPELGISQNDQKILK-------QN-VSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~-------~~-~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
+++++.+|++|++ +.+.++ .+ +|+|||+||.... .+.++..+++|+.|+.++.+++...
T Consensus 260 ~~~~~~~Dvtd~~------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~ 333 (454)
T 3u0b_A 260 GGTALTLDVTADD------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGN 333 (454)
T ss_dssp TCEEEECCTTSTT------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCHH------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3568999999985 223222 23 9999999997642 1345567999999999999999864
Q ss_pred C---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 T---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. +..+||++||..+.... .....|+.+|...+.+.+.+
T Consensus 334 ~~~~~~g~iV~iSS~a~~~g~------------~g~~~YaasKaal~~l~~~l 374 (454)
T 3u0b_A 334 GTIGEGGRVIGLSSMAGIAGN------------RGQTNYATTKAGMIGLAEAL 374 (454)
T ss_dssp TSSCTTCEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEEEeChHhCCCC------------CCCHHHHHHHHHHHHHHHHH
Confidence 1 25689999997553211 12457888888666555543
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00025 Score=65.35 Aligned_cols=76 Identities=5% Similarity=0.004 Sum_probs=54.0
Q ss_pred CccEEEEcccccCh----------hhhHHHHHHhhHHHHHHHHHHHH----hcCCCceEEEEeCCccccCCCcccccccC
Q psy16526 332 NVSVVFHSAATVKF----------DEALKLSVTINMLGTKRLVELCH----EMTHLEALIHVSTAYCNCDREEVREIIYS 397 (422)
Q Consensus 332 ~~d~ViH~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~ 397 (422)
++|++||+||.... .+.++..+++|+.|+.++++++. +.+ ..++|++||..+...
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~---------- 140 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKP---------- 140 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC----------
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCC----------
Confidence 68999999997543 13455679999999999999885 333 579999999865432
Q ss_pred CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 398 PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 398 ~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
......|+.+|...+.+.+.+
T Consensus 141 --~~~~~~Y~asK~a~~~~~~~l 161 (244)
T 1zmo_A 141 --LAYNPLYGPARAATVALVESA 161 (244)
T ss_dssp --CTTCTTHHHHHHHHHHHHHHH
T ss_pred --CCCchHHHHHHHHHHHHHHHH
Confidence 112335777787777766544
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0007 Score=62.67 Aligned_cols=77 Identities=14% Similarity=0.073 Sum_probs=55.4
Q ss_pred cCccEEEEccccc-C---h----hhhHHHHHHhhHHHHHHHHHHHHh----cCCCceEEEEeCCccccCCCcccccccCC
Q psy16526 331 QNVSVVFHSAATV-K---F----DEALKLSVTINMLGTKRLVELCHE----MTHLEALIHVSTAYCNCDREEVREIIYSP 398 (422)
Q Consensus 331 ~~~d~ViH~Aa~~-~---~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~ 398 (422)
.++|++||+||.. . + .+.++..+++|+.|+.++++++.. .+ ..++|++||..+...
T Consensus 71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------- 138 (254)
T 1zmt_A 71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP----------- 138 (254)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC-----------
T ss_pred CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC-----------
Confidence 4789999999976 2 1 134556799999999999998852 23 469999999865421
Q ss_pred CCCHHHHHHHHhhCCHHHhhhc
Q psy16526 399 PYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 399 p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..+...|+.+|...+.+.+.+
T Consensus 139 -~~~~~~Y~~sK~a~~~~~~~l 159 (254)
T 1zmt_A 139 -WKELSTYTSARAGACTLANAL 159 (254)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHH
T ss_pred -CCCchHHHHHHHHHHHHHHHH
Confidence 123457888888877776654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00044 Score=66.65 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=61.4
Q ss_pred eCcCCCCCCCCCHHHHHH---HhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH----hcCCCceE
Q psy16526 311 LGDITEPELGISQNDQKI---LKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH----EMTHLEAL 376 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~---~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~r~ 376 (422)
.+|+++.+-. ....+. ...++|++||+||.... .+.++..+++|+.|+.++++++. +.+ ..++
T Consensus 70 ~~D~~~~~~~--~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grI 146 (319)
T 1gz6_A 70 VANYDSVEAG--EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRI 146 (319)
T ss_dssp EEECCCGGGH--HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred EEeCCCHHHH--HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEE
Confidence 4788886411 011111 12478999999997542 13455679999999999988874 333 5799
Q ss_pred EEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|++||..+.... | +...|+.+|...+.+.+.+
T Consensus 147 V~vsS~~~~~~~----------~--~~~~Y~aSK~a~~~~~~~l 178 (319)
T 1gz6_A 147 IMTASASGIYGN----------F--GQANYSAAKLGLLGLANTL 178 (319)
T ss_dssp EEECCHHHHHCC----------T--TCHHHHHHHHHHHHHHHHH
T ss_pred EEECChhhccCC----------C--CCHHHHHHHHHHHHHHHHH
Confidence 999997442111 1 2457888888777766544
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0012 Score=63.44 Aligned_cols=106 Identities=16% Similarity=-0.000 Sum_probs=71.4
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCC--CCccccccccccc--eeeEEee------cCCcccccchhHHHHHHHHHH
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNY--NGPTGIIAAAGKG--FFRTMLC------HENKVADLVPVDIVINLMICA 75 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~--~g~~g~~~~~g~G--~lr~~~~------~~~~~~DiVPvD~vvn~~i~a 75 (422)
.++++++|+||+.|.+.....+.|.-.+- ......+.....| ..-.+++ +++...|.|.||-|+++++.+
T Consensus 171 ~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~ 250 (341)
T 3enk_A 171 DPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAA 250 (341)
T ss_dssp CTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHH
T ss_pred CCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHH
Confidence 34699999999999997655554543221 1112222222222 2223445 788899999999999998887
Q ss_pred HHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 76 AWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 76 a~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+...... ....+||++++ .++|+.++.+.+.+....
T Consensus 251 ~~~~~~~-------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 286 (341)
T 3enk_A 251 LDALERR-------DASLTVNLGTG--RGYSVLEVVRAFEKASGR 286 (341)
T ss_dssp HHHHHHH-------TSCEEEEESCS--CCEEHHHHHHHHHHHHCS
T ss_pred HHhhhcC-------CcceEEEeCCC--CceeHHHHHHHHHHHhCC
Confidence 7543221 23579999987 689999999999887654
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00082 Score=65.53 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=75.4
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccc-cccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTG-IIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g-~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
++|++|+||+.|.+....+..++-....+... ++.....|..-.++++++...+.|.||-|+++++.++-....
T Consensus 190 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~----- 264 (372)
T 3slg_A 190 GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNG----- 264 (372)
T ss_dssp TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG-----
T ss_pred CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccC-----
Confidence 89999999999999877665444333333322 222333455556788889999999999999998877633221
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcC
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQN 121 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~ 121 (422)
.....+||++++ ..++|+.++.+.+.+.....
T Consensus 265 --~~~~~~~ni~~~-~~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 265 --VATGKIYNIGNP-NNNFSVRELANKMLELAAEF 296 (372)
T ss_dssp --TTTTEEEEECCT-TCEEEHHHHHHHHHHHHHHC
T ss_pred --cCCCceEEeCCC-CCCccHHHHHHHHHHHhCCC
Confidence 024579999984 25899999999999877653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00094 Score=63.45 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=69.5
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+....|. ++ ...++.....|..-.++++++...+.|.||-|+++++.++ .+
T Consensus 151 ~g~~~~ilRp~~v~G~~~~~~-~~------~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~----~~---- 215 (311)
T 3m2p_A 151 KGLCIKNLRFAHLYGFNEKNN-YM------INRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYAL----KQ---- 215 (311)
T ss_dssp SCCEEEEEEECEEECSCC--C-CH------HHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHT----TC----
T ss_pred cCCCEEEEeeCceeCcCCCCC-CH------HHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHH----hc----
Confidence 589999999999998665432 11 1223333344555667789999999999999999987765 21
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+....+||++++ .++|+.++.+.+.+....
T Consensus 216 --~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 245 (311)
T 3m2p_A 216 --EKVSGTFNIGSG--DALTNYEVANTINNAFGN 245 (311)
T ss_dssp --TTCCEEEEECCS--CEECHHHHHHHHHHHTTC
T ss_pred --CCCCCeEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 124679999987 589999999999887654
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0034 Score=58.00 Aligned_cols=77 Identities=13% Similarity=0.227 Sum_probs=56.1
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChh-----hhHHHHHHhhHHHHHHHHHHHHhc--CC
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFD-----EALKLSVTINMLGTKRLVELCHEM--TH 372 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 372 (422)
...++..+.+|++|++ +++++ ..++|+++|+||..... +.++..+++|+.|+..+.+++... .+
T Consensus 52 ~~~~~~~~~~Dv~~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~ 125 (242)
T 4b79_A 52 RHPRIRREELDITDSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR 125 (242)
T ss_dssp CCTTEEEEECCTTCHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 3467889999999873 34444 34789999999976522 345667999999999998887542 01
Q ss_pred CceEEEEeCCccc
Q psy16526 373 LEALIHVSTAYCN 385 (422)
Q Consensus 373 ~~r~v~~SS~~~~ 385 (422)
-.++|.+||..+.
T Consensus 126 ~G~IVnisS~~~~ 138 (242)
T 4b79_A 126 GGSILNIASMYST 138 (242)
T ss_dssp CEEEEEECCGGGT
T ss_pred CCeEEEEeecccc
Confidence 2589999998653
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0011 Score=64.00 Aligned_cols=100 Identities=17% Similarity=0.187 Sum_probs=70.9
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
++|++|+||+.|.+....|...|.. -...++.....|..-.++++++...|.|.||-|+++++.++-...
T Consensus 194 g~~~~ilRp~~v~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~------- 263 (351)
T 3ruf_A 194 GFKTIGLRYFNVFGRRQDPNGAYAA---VIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD------- 263 (351)
T ss_dssp CCCCEEEEECSEESTTCCCCSTTCC---HHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG-------
T ss_pred CCCEEEEeeCceeCcCCCCCcchhh---HHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc-------
Confidence 7999999999999966544321110 011222233345555678899999999999999999887763211
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++||.++.+.+.+....
T Consensus 264 -~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 264 -SAKDNIYNVAVG--DRTTLNELSGYIYDELNL 293 (351)
T ss_dssp -GGCSEEEEESCS--CCEEHHHHHHHHHHHHHT
T ss_pred -ccCCCEEEeCCC--CcccHHHHHHHHHHHhCc
Confidence 124579999997 589999999999987765
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0009 Score=65.92 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=70.2
Q ss_pred CCCEEEEccceeeeccCCC---ccccccCCC--C-----ccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHH
Q psy16526 8 NLPVAIVRPSIVISSVNEP---VAGWVDNYN--G-----PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAW 77 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP---~pGWidn~~--g-----~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~ 77 (422)
+++++|+||+.|.+....| -|+|++... | ...++.....|-.-.++++++...|.|.||-|+++++.++-
T Consensus 211 gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~ 290 (404)
T 1i24_A 211 GIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIA 290 (404)
T ss_dssp CCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHh
Confidence 7999999999999977655 456666553 1 12233333345444567888899999999999999887762
Q ss_pred HHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHH
Q psy16526 78 KTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFES 117 (422)
Q Consensus 78 ~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~ 117 (422)
... ......+||+++ .++|+.++.+.+.+.
T Consensus 291 ~~~-------~~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 291 NPA-------KAGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp SCC-------CTTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred Ccc-------cCCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 111 011126999976 479999999999886
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0039 Score=57.99 Aligned_cols=74 Identities=8% Similarity=0.125 Sum_probs=54.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++.++.+|++|++ +.+.+ ..++|+++|.||... +. +.++..+++|+.|+..+.+++..
T Consensus 56 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 129 (254)
T 4fn4_A 56 KEVLGVKADVSKKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP 129 (254)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56889999999974 33333 247899999999643 22 34566799999999999888764
Q ss_pred ----cCCCceEEEEeCCccc
Q psy16526 370 ----MTHLEALIHVSTAYCN 385 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~ 385 (422)
.+ -.++|.+||..+.
T Consensus 130 ~m~~~~-~G~IVnisS~~g~ 148 (254)
T 4fn4_A 130 IMLKQG-KGVIVNTASIAGI 148 (254)
T ss_dssp HHHHHT-CEEEEEECCGGGT
T ss_pred HHHHcC-CcEEEEEechhhc
Confidence 23 3689999998654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=61.87 Aligned_cols=101 Identities=14% Similarity=0.031 Sum_probs=69.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccc----cccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhh
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAA----AGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVK 82 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~----~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~ 82 (422)
.++|++|+||+.|.+....|-.+.- .....++.. ...|-.-.++++++...|+|.||-|+.+++.++-...
T Consensus 160 ~~~~~~ilRp~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-- 234 (319)
T 4b8w_A 160 YGCTFTAVIPTNVFGPHDNFNIEDG---HVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYN-- 234 (319)
T ss_dssp HCCEEEEEEECEEECTTCCCCTTTS---CHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCC--
T ss_pred hCCCEEEEeeccccCCCCCCCCccc---cccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccc--
Confidence 4799999999999986654322100 000111111 3345455677899999999999999999887763211
Q ss_pred hccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 83 YKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 83 ~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++|+.++.+.+.+....
T Consensus 235 ------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 264 (319)
T 4b8w_A 235 ------EVEPIILSVGEE--DEVSIKEAAEAVVEAMDF 264 (319)
T ss_dssp ------CSSCEEECCCGG--GCEEHHHHHHHHHHHTTC
T ss_pred ------cCCceEEEecCC--CceeHHHHHHHHHHHhCC
Confidence 124569999986 689999999999887653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0033 Score=61.74 Aligned_cols=106 Identities=13% Similarity=-0.020 Sum_probs=68.6
Q ss_pred CCCEEEEccceeeeccCCCccccccC-CCCcccccc-----ccccce------------eeEEee------cCCcccccc
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDN-YNGPTGIIA-----AAGKGF------------FRTMLC------HENKVADLV 63 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn-~~g~~g~~~-----~~g~G~------------lr~~~~------~~~~~~DiV 63 (422)
+++++|+||+.|.+....+..|+.++ -......+. ....|. .-.+++ +++...|+|
T Consensus 194 gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v 273 (397)
T 1gy8_A 194 GIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV 273 (397)
T ss_dssp CCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEE
T ss_pred CCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeE
Confidence 79999999999998766555555432 122222222 222232 123445 677888999
Q ss_pred hhHHHHHHHHHHHHHHhhhhccCCCCCCc---eEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 64 PVDIVINLMICAAWKTAVKYKNSNGAQGI---TVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 64 PvD~vvn~~i~aa~~~~~~~~~~~~~~~~---~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
.||-|+++++.++...... ...... .+||++++ .++||.++.+.+.+...
T Consensus 274 ~v~Dva~a~~~~l~~~~~~----~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 326 (397)
T 1gy8_A 274 HVCDLASAHILALDYVEKL----GPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTG 326 (397)
T ss_dssp EHHHHHHHHHHHHHHHHTC----CTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred eHHHHHHHHHHHHhccccc----ccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 9999999988776432210 000013 79999886 68999999999988654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0017 Score=63.52 Aligned_cols=100 Identities=25% Similarity=0.210 Sum_probs=67.9
Q ss_pred CCCEEEEccceeeeccCCCccc-cccCC----CC-ccccccccccceeeEEeecCCcccccchhHHHHHH-HHHHHHHHh
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAG-WVDNY----NG-PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINL-MICAAWKTA 80 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pG-Widn~----~g-~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~-~i~aa~~~~ 80 (422)
+++++|+||+.|.+....+.+| |..+. .+ ...++..+..|..-.++++++...+.|.||-|+++ ++.++-
T Consensus 200 gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~--- 276 (377)
T 2q1s_A 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAAD--- 276 (377)
T ss_dssp CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHH---
T ss_pred CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHh---
Confidence 7999999999999976644344 22221 11 11222223344333456788899999999999999 666552
Q ss_pred hhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 81 VKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 81 ~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+ +... +||++++ .++|+.++.+.+.+....
T Consensus 277 -~------~~~g-~~~i~~~--~~~s~~e~~~~i~~~~g~ 306 (377)
T 2q1s_A 277 -G------TPGG-VYNIASG--KETSIADLATKINEITGN 306 (377)
T ss_dssp -C------CTTE-EEECCCC--CCEEHHHHHHHHHHHHTC
T ss_pred -c------CCCC-eEEecCC--CceeHHHHHHHHHHHhCC
Confidence 1 1234 9999987 589999999999887653
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.006 Score=56.47 Aligned_cols=76 Identities=16% Similarity=0.275 Sum_probs=54.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++..+.+|++|++ +.+.+ ..++|+++|.||.... .+.++..+++|+.|+..+.+++..
T Consensus 46 ~~~~~~~~~Dv~~~~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~ 119 (247)
T 3ged_A 46 RPNLFYFHGDVADPL------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRD 119 (247)
T ss_dssp CTTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCCEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 356889999999974 33333 2478999999987542 145667799999999999888754
Q ss_pred c--CCCceEEEEeCCccc
Q psy16526 370 M--THLEALIHVSTAYCN 385 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~ 385 (422)
. .+-.++|.+||..+.
T Consensus 120 ~m~~~~G~IInisS~~~~ 137 (247)
T 3ged_A 120 ELIKNKGRIINIASTRAF 137 (247)
T ss_dssp HHHHTTCEEEEECCGGGT
T ss_pred HHhhcCCcEEEEeecccc
Confidence 2 012589999997653
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.005 Score=57.33 Aligned_cols=75 Identities=9% Similarity=0.035 Sum_probs=54.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++..+.+|++|++ +.+.+. .++|+++|+||.... .+.++..+++|+.|+..+.+++..
T Consensus 58 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 131 (255)
T 4g81_D 58 YDAHGVAFDVTDEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR 131 (255)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46888999999974 333332 368999999997542 145667799999999999887643
Q ss_pred ---cCCCceEEEEeCCccc
Q psy16526 370 ---MTHLEALIHVSTAYCN 385 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~ 385 (422)
.++-.++|.+||..+.
T Consensus 132 m~~~~~~G~IVnisS~~~~ 150 (255)
T 4g81_D 132 MIARNSGGKIINIGSLTSQ 150 (255)
T ss_dssp HHHHTCCEEEEEECCGGGT
T ss_pred HHHccCCCEEEEEeehhhc
Confidence 1224689999998654
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0031 Score=60.39 Aligned_cols=106 Identities=10% Similarity=0.002 Sum_probs=70.5
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCC-ccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNG-PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g-~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....+...+-.+..+ ...++.....|..-.++++++...+.|.||-|+++++.++-....
T Consensus 167 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~----- 241 (345)
T 2bll_A 167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN----- 241 (345)
T ss_dssp CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-----
T ss_pred CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccc-----
Confidence 79999999999998765543222111111 122232333444445678888889999999999998877632211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcC
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQN 121 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~ 121 (422)
.....+||++++ .+++|+.++.+.+.+.....
T Consensus 242 --~~~g~~~~i~~~-~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 242 --RCDGEIINIGNP-ENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp --TTTTEEEEECCT-TSEEEHHHHHHHHHHHHHTC
T ss_pred --cCCCceEEeCCC-CCCCCHHHHHHHHHHHhCCC
Confidence 013479999875 24899999999998876543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0017 Score=63.09 Aligned_cols=99 Identities=15% Similarity=-0.001 Sum_probs=68.5
Q ss_pred ccCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 5 ESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 5 ~~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.+.+++++|+||+.|.+....|...|. .....++.....|..-.++++++...|.|.||-|+++++.++ .+
T Consensus 175 ~~~~~~~~~lR~~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~----~~-- 245 (362)
T 3sxp_A 175 HSNDNVQVGLRYFNVYGPREFYKEKTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAM----KA-- 245 (362)
T ss_dssp TTTTSCEEEEEECSEESTTCGGGGGGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHT----TC--
T ss_pred HhccCCEEEEEeCceeCcCCCCCCcch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHH----hc--
Confidence 344599999999998885544322110 111223333344555556788889999999999999987775 11
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+... +||++++ .++||.++.+.+.+...
T Consensus 246 ----~~~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 246 ----QKSG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp ----SSCE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred ----CCCC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 1233 9999987 58999999999988766
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0027 Score=61.13 Aligned_cols=95 Identities=18% Similarity=0.051 Sum_probs=67.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.|.+....|- + ....++...-.|..-.++++++...|.|.||-|+++++.++-..
T Consensus 192 ~g~~~~ilRp~~v~G~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~------- 257 (346)
T 4egb_A 192 YQLPVIVTRCSNNYGPYQYPE-K------LIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKG------- 257 (346)
T ss_dssp HCCCEEEEEECEEESTTCCTT-S------HHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHC-------
T ss_pred hCCCEEEEeecceeCcCCCcc-c------hHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcC-------
Confidence 379999999999998554321 1 11222333334444456788999999999999999987776221
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 258 ---~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 286 (346)
T 4egb_A 258 ---RVGEVYNIGGN--NEKTNVEVVEQIITLLGK 286 (346)
T ss_dssp ---CTTCEEEECCS--CCEEHHHHHHHHHHHHTC
T ss_pred ---CCCCEEEECCC--CceeHHHHHHHHHHHhCC
Confidence 23469999997 679999999999887654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.011 Score=56.24 Aligned_cols=103 Identities=17% Similarity=0.106 Sum_probs=66.2
Q ss_pred CCCEEEEccceeeeccCCCccccccC-CCCccccccc--cccceeeEEee------cCCcccccchhHHHHHHHHHHHHH
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDN-YNGPTGIIAA--AGKGFFRTMLC------HENKVADLVPVDIVINLMICAAWK 78 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn-~~g~~g~~~~--~g~G~lr~~~~------~~~~~~DiVPvD~vvn~~i~aa~~ 78 (422)
+++++|+||+.|.+.......|.-++ .......+.. .+.+-.-.+++ +++...|.|.||-|+++++.++-.
T Consensus 161 ~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~ 240 (330)
T 2c20_A 161 NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKD 240 (330)
T ss_dssp SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhc
Confidence 79999999999998653333232211 1111222222 22232223444 677888999999999998877643
Q ss_pred HhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 79 TAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 79 ~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
... .....+||++++ .++|+.++.+.+.+...
T Consensus 241 ~~~-------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 272 (330)
T 2c20_A 241 LQN-------GGESDFYNLGNG--NGFSVKEIVDAVREVTN 272 (330)
T ss_dssp HHT-------TCCCEEEECCCT--TCBCHHHHHHHHHHHTT
T ss_pred ccc-------CCCCCeEEeCCC--CCccHHHHHHHHHHHhC
Confidence 221 112479999986 68999999999988654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.002 Score=65.97 Aligned_cols=95 Identities=16% Similarity=0.105 Sum_probs=63.0
Q ss_pred CCCCEEEEccceeeeccCCCccccc-cCCCC--ccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhh
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWV-DNYNG--PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKY 83 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWi-dn~~g--~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~ 83 (422)
.++|++|+||+.|.+.... ||. .|... ...++.....+- ..-.++++...|++|||.|+.+++.++. .
T Consensus 326 ~gi~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~g~~~~~~v~v~DvA~ai~~~~~----~- 396 (508)
T 4f6l_B 326 NGLDGRIVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQLD-CIGVSMAEMPVDFSFVDTTARQIVALAQ----V- 396 (508)
T ss_dssp TTCEEEEEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTCS-EEETTGGGSEEECEEHHHHHHHHHHHTT----B-
T ss_pred cCCCEEEEecceeccCCCC---CcccCCcchHHHHHHHHHHHHcC-CCCCCccCceEEEEcHHHHHHHHHHHHh----C-
Confidence 5899999999999996643 332 22111 122222222211 1112346788999999999999888762 1
Q ss_pred ccCCCCCCceEEEccCCCCCCccHhhHHHHHHHH
Q psy16526 84 KNSNGAQGITVYNCCTGQRNPISWKQFVNYSFES 117 (422)
Q Consensus 84 ~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~ 117 (422)
+....+||++++ ++++|.++.+.+.+.
T Consensus 397 -----~~~~~~~nl~~~--~~~s~~el~~~i~~~ 423 (508)
T 4f6l_B 397 -----NTPQIIYHVLSP--NKMPVKSLLECVKRK 423 (508)
T ss_dssp -----CCSCSEEEESCS--CEEEHHHHHHHHHSS
T ss_pred -----CCCCCEEEeCCC--CCCCHHHHHHHHHHc
Confidence 124579999997 689999999988764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0032 Score=60.41 Aligned_cols=99 Identities=16% Similarity=0.104 Sum_probs=67.6
Q ss_pred CCCEEEEccceeeeccCCCc--cccccCCCCccccccccccce-----eeEEeecCCcccccchhHHHHHHHHHHHHHHh
Q psy16526 8 NLPVAIVRPSIVISSVNEPV--AGWVDNYNGPTGIIAAAGKGF-----FRTMLCHENKVADLVPVDIVINLMICAAWKTA 80 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~--pGWidn~~g~~g~~~~~g~G~-----lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~ 80 (422)
+++++|+||+.|.+....+. .|++.. ++.....|. .-.++++++...|.|.||-|+++++.++-...
T Consensus 184 gi~~~ilrp~~v~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~ 257 (347)
T 1orr_A 184 GLNTVVFRHSSMYGGRQFATYDQGWVGW------FCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVS 257 (347)
T ss_dssp CCEEEEEEECCEECTTCCCBTTBCHHHH------HHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHH
T ss_pred CCcEEEEccCceeCcCCCCCCcCcHHHH------HHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccc
Confidence 69999999999998654432 122211 111112222 23356888899999999999999888764311
Q ss_pred hhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 81 VKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 81 ~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
. ....+||++++..+++||.++.+.+.+....
T Consensus 258 ~--------~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~ 289 (347)
T 1orr_A 258 K--------IRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 289 (347)
T ss_dssp H--------HTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred c--------CCCCEEEeCCCCCCCccHHHHHHHHHHHhCC
Confidence 1 1245999999866789999999999887653
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0052 Score=57.79 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=64.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.+...+.+|++|++ +.+++ ..++|+++|.||.... .+.++..+++|+.|+..+.+++...
T Consensus 75 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~ 148 (273)
T 4fgs_A 75 GGAVGIQADSANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148 (273)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred CCeEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46788999999973 33333 2368999999997542 2456677999999999999988753
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+-.++|.+||..+... .| ....|..+|..-+.+.+.
T Consensus 149 m~~~G~IInisS~~~~~~----------~~--~~~~Y~asKaav~~ltr~ 186 (273)
T 4fgs_A 149 LARGSSVVLTGSTAGSTG----------TP--AFSVYAASKAALRSFARN 186 (273)
T ss_dssp EEEEEEEEEECCGGGGSC----------CT--TCHHHHHHHHHHHHHHHH
T ss_pred HhhCCeEEEEeehhhccC----------CC--CchHHHHHHHHHHHHHHH
Confidence 11247999998765321 11 133566666655554443
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0033 Score=60.78 Aligned_cols=101 Identities=17% Similarity=0.066 Sum_probs=64.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+....+-.+++ ..++-....|..-. ..+++...|.|.||-|+++++.++-.....
T Consensus 184 ~gi~~~~lrp~~v~G~~~~~~~~~~------~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~---- 252 (357)
T 1rkx_A 184 HGTAVATVRAGNVIGGGDWALDRIV------PDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYLLLAQKLYTD---- 252 (357)
T ss_dssp HCCEEEEEECCCEECTTCCCSSCHH------HHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHHHHHHHHHHT----
T ss_pred CCceEEEEeeceeeCCCCCccccHH------HHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHHHHHHhhhhc----
Confidence 3799999999999985332111111 11222222232222 345677889999999999988776432111
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
......+||++++...++|+.++.+.+.+...
T Consensus 253 -~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g 284 (357)
T 1rkx_A 253 -GAEYAEGWNFGPNDADATPVKNIVEQMVKYWG 284 (357)
T ss_dssp -CGGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred -CCCCCceEEECCCCCCcccHHHHHHHHHHHhC
Confidence 00124599999865578999999999988654
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.004 Score=59.02 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=66.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccc-eeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKG-FFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G-~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.+++++|+||+.|.+....+ |++.. ++.....| ..-.++++++...|.|.||-|+++++.++- .
T Consensus 156 ~g~~~~ilRp~~v~G~~~~~--~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~----~--- 220 (313)
T 3ehe_A 156 FDMQAWIYRFANVIGRRSTH--GVIYD------FIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR----G--- 220 (313)
T ss_dssp TTCEEEEEECSCEESTTCCC--SHHHH------HHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT----C---
T ss_pred cCCCEEEEeeccccCcCCCc--ChHHH------HHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc----c---
Confidence 37999999999999854432 22211 12222222 223467888999999999999999887762 1
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++|+.++.+.+.+....
T Consensus 221 ---~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 250 (313)
T 3ehe_A 221 ---DERVNIFNIGSE--DQIKVKRIAEIVCEELGL 250 (313)
T ss_dssp ---CSSEEEEECCCS--CCEEHHHHHHHHHHHTTC
T ss_pred ---CCCCceEEECCC--CCeeHHHHHHHHHHHhCC
Confidence 134579999997 689999999999887654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.005 Score=58.16 Aligned_cols=79 Identities=11% Similarity=-0.003 Sum_probs=52.7
Q ss_pred cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHhcC-CCceEEEEeCCccccCCCcccccccCCCC
Q psy16526 331 QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPY 400 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~ 400 (422)
.++|++||+||... +. +.++..+++|+.|+.++++++...- .-.++|++||..+... .|.
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~----------~~~ 187 (297)
T 1d7o_A 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI----------IPG 187 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CTT
T ss_pred CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccC----------CCC
Confidence 37899999998531 11 3455679999999999999997641 1258999999765321 111
Q ss_pred CHHHHHHHHhhCCHHHhhhc
Q psy16526 401 DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 401 ~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ...|+.+|...+.+.+.+
T Consensus 188 ~-~~~Y~asKaa~~~~~~~l 206 (297)
T 1d7o_A 188 Y-GGGMSSAKAALESDTRVL 206 (297)
T ss_dssp C-TTTHHHHHHHHHHHHHHH
T ss_pred c-chHHHHHHHHHHHHHHHH
Confidence 0 025777777777666544
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.013 Score=54.56 Aligned_cols=87 Identities=21% Similarity=0.356 Sum_probs=62.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+....++ . ....|....+.++ +...+.|.||-++++++.++- +
T Consensus 142 ~~~~~~ilRp~~v~G~~~~~~----~----------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~----~---- 198 (286)
T 3ius_A 142 PNLPLHVFRLAGIYGPGRGPF----S----------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMA----R---- 198 (286)
T ss_dssp TTCCEEEEEECEEEBTTBSSS----T----------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHH----S----
T ss_pred cCCCEEEEeccceECCCchHH----H----------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHh----C----
Confidence 589999999999998654432 1 1122433344444 577899999999999877762 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+....+||++++ .++|+.++.+.+.+....
T Consensus 199 --~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 228 (286)
T 3ius_A 199 --PDPGAVYNVCDD--EPVPPQDVIAYAAELQGL 228 (286)
T ss_dssp --CCTTCEEEECCS--CCBCHHHHHHHHHHHHTC
T ss_pred --CCCCCEEEEeCC--CCccHHHHHHHHHHHcCC
Confidence 123469999987 679999999999887654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0021 Score=64.13 Aligned_cols=95 Identities=15% Similarity=0.061 Sum_probs=62.4
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCC--CccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYN--GPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~--g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.++|++|+||+.|.+....+. |..|.. ....++.....+- ..-.++++...+++|||.|+++++.++ ..
T Consensus 245 ~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~DvA~ai~~~~----~~-- 315 (427)
T 4f6c_A 245 NGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLD-CIGVSMAEMPVDFSFVDTTARQIVALA----QV-- 315 (427)
T ss_dssp TTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSS-EEEHHHHTCEECCEEHHHHHHHHHHHT----TS--
T ss_pred cCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcC-CCCCccccceEEEeeHHHHHHHHHHHH----cC--
Confidence 579999999999999665421 222211 0112222222211 111244688899999999999988776 11
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHH
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFE 116 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~ 116 (422)
+....+||++++ .|++|.++.+.+.+
T Consensus 316 ----~~~g~~~~l~~~--~~~s~~el~~~i~~ 341 (427)
T 4f6c_A 316 ----NTPQIIYHVLSP--NKMPVKSLLECVKR 341 (427)
T ss_dssp ----CCCCSEEEESCS--CCEEHHHHHHHHHS
T ss_pred ----CCCCCEEEecCC--CCCcHHHHHHHHHH
Confidence 124579999987 68999999998876
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0046 Score=64.95 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=51.8
Q ss_pred CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHH----HhcCCCceEEEEeCCccccCCCcccccccCCCC
Q psy16526 332 NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELC----HEMTHLEALIHVSTAYCNCDREEVREIIYSPPY 400 (422)
Q Consensus 332 ~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~ 400 (422)
++|++||+||.... .+.++..+++|+.|+.++++++ ++.+ ..++|++||..+... .
T Consensus 102 ~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~------------~ 168 (613)
T 3oml_A 102 RVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYG------------N 168 (613)
T ss_dssp ---CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHC------------C
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC------------C
Confidence 68999999997542 1345667999999999999998 3333 579999999754321 1
Q ss_pred CHHHHHHHHhhCCHHHhhhc
Q psy16526 401 DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 401 ~p~~~y~~~K~~~E~~~~~~ 420 (422)
.....|+.+|...+.+.+.+
T Consensus 169 ~~~~~Y~asKaal~~lt~~l 188 (613)
T 3oml_A 169 FGQVNYTAAKMGLIGLANTV 188 (613)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 13456788887777666554
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.013 Score=54.10 Aligned_cols=75 Identities=8% Similarity=0.099 Sum_probs=54.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~ 371 (422)
.++..+.+|++|++.. +.+. .++|+++|.||.... .+.++..+++|+.|+..+.+++.. .+
T Consensus 56 ~~~~~~~~Dv~d~~~v------~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g 129 (247)
T 4hp8_A 56 GNASALLIDFADPLAA------KDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG 129 (247)
T ss_dssp CCEEEEECCTTSTTTT------TTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEccCCCHHHH------HHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC
Confidence 4678999999998532 2222 368999999997542 245667799999999999887543 22
Q ss_pred CCceEEEEeCCccc
Q psy16526 372 HLEALIHVSTAYCN 385 (422)
Q Consensus 372 ~~~r~v~~SS~~~~ 385 (422)
+-.++|.+||..+.
T Consensus 130 ~~G~IVnisS~~~~ 143 (247)
T 4hp8_A 130 RSGKVVNIASLLSF 143 (247)
T ss_dssp CCEEEEEECCGGGT
T ss_pred CCcEEEEEechhhC
Confidence 23689999997653
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0051 Score=59.13 Aligned_cols=95 Identities=12% Similarity=-0.001 Sum_probs=64.8
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
+++++|+||+.|.+....|..|. ....++...-.|-.-.++++++...+.|.||-|+++++.++ ..
T Consensus 189 ~~~~~ilrp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~----~~----- 254 (343)
T 2b69_A 189 GVEVRVARIFNTFGPRMHMNDGR-----VVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM----NS----- 254 (343)
T ss_dssp CCCEEEEEECCEECTTCCTTCCC-----HHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH----TS-----
T ss_pred CCcEEEEEEcceeCcCCCCCccc-----HHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHH----hc-----
Confidence 79999999999988654432110 01112222223333346788888999999999999987664 11
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+...+||++++ .++|+.++.+.+.+....
T Consensus 255 --~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 283 (343)
T 2b69_A 255 --NVSSPVNLGNP--EEHTILEFAQLIKNLVGS 283 (343)
T ss_dssp --SCCSCEEESCC--CEEEHHHHHHHHHHHHTC
T ss_pred --CCCCeEEecCC--CCCcHHHHHHHHHHHhCC
Confidence 12358999987 589999999999887653
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0069 Score=57.19 Aligned_cols=99 Identities=12% Similarity=0.052 Sum_probs=64.7
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccc-eeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKG-FFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G-~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....+ |++. .++.....| ..-.+.++++...|.|.||=|+++++.++-.....
T Consensus 156 g~~~~~lrp~~v~g~~~~~--~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~---- 223 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRH--GVIY------DFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM---- 223 (312)
T ss_dssp CCEEEEEEECEEECTTCCS--SHHH------HHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS----
T ss_pred CCCEEEEeeccccCcCCCC--ChHH------HHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc----
Confidence 7999999999999854332 2211 112111222 22346788888999999999999988877442211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCC
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNP 122 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p 122 (422)
.....+||++++ .++|+.++.+.+.+.....|
T Consensus 224 --~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 224 --DAPFLALNVGNV--DAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp --CCSEEEEEESCS--SCEEHHHHHHHHHHHHTCCC
T ss_pred --CCCCcEEEEcCC--CceeHHHHHHHHHHHhCCCC
Confidence 134679999987 68999999999998766543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0079 Score=56.04 Aligned_cols=75 Identities=9% Similarity=0.143 Sum_probs=53.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC---h---hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK---F---DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~---~---~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++.+|++|++ +.+++ ..++|+++|.||... + .+.++..+++|+.|+..+.+++...
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m 128 (258)
T 4gkb_A 55 PRATYLPVELQDDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHL 128 (258)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCEEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46788999999873 32332 247899999999743 1 2445667999999999998887532
Q ss_pred -CCCceEEEEeCCccc
Q psy16526 371 -THLEALIHVSTAYCN 385 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~ 385 (422)
.+-.++|.+||..+.
T Consensus 129 ~~~~G~IVnisS~~~~ 144 (258)
T 4gkb_A 129 KATRGAIVNISSKTAV 144 (258)
T ss_dssp HHHTCEEEEECCTHHH
T ss_pred HhcCCeEEEEeehhhc
Confidence 012589999998654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0074 Score=58.24 Aligned_cols=97 Identities=13% Similarity=0.072 Sum_probs=66.4
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCc-cccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGP-TGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~-~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....|...| .+. ..++.....|..-.++++++...+.|.||-|+++++.++....
T Consensus 196 g~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~------ 265 (352)
T 1sb8_A 196 GFSTIGLRYFNVFGRRQDPNGAY----AAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL------ 265 (352)
T ss_dssp CCCCEEEEECCEECTTCCCCSTT----CCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG------
T ss_pred CCCEEEEEECceeCcCCCCCcch----hhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccc------
Confidence 69999999999998654432101 111 1122222334444567888999999999999999877663211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
.....+||++++ .++|+.++.+.+.+..
T Consensus 266 --~~~~~~~ni~~~--~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 266 --DARNQVYNIAVG--GRTSLNQLFFALRDGL 293 (352)
T ss_dssp --GGCSEEEEESCS--CCEEHHHHHHHHHHHH
T ss_pred --cCCCceEEeCCC--CCccHHHHHHHHHHHH
Confidence 113579999987 5899999999998876
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0087 Score=57.58 Aligned_cols=102 Identities=10% Similarity=0.031 Sum_probs=64.0
Q ss_pred CcEEEEeCcCCCC--CCCCCHH-------------HHHHH-------hcCccEEEEcccccC-----h----hhhHHHHH
Q psy16526 305 AKIKPILGDITEP--ELGISQN-------------DQKIL-------KQNVSVVFHSAATVK-----F----DEALKLSV 353 (422)
Q Consensus 305 ~~v~~v~gDl~~~--~~~l~~~-------------~~~~~-------~~~~d~ViH~Aa~~~-----~----~~~~~~~~ 353 (422)
..+.++.+|+++. +. ++++ +++.+ ..++|++||+||... + .+.++..+
T Consensus 65 ~~~~~~~~Dv~~~~~~~-~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~ 143 (329)
T 3lt0_A 65 NILDMLPFDASFDTAND-IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDAL 143 (329)
T ss_dssp CEEEEEECCTTCSSGGG-CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHH
T ss_pred cccccccccccccchhh-hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHH
Confidence 4578899999887 31 1111 22222 236899999998631 1 13455679
Q ss_pred HhhHHHHHHHHHHHHhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHH-HHHHHhhCCHHHhhh
Q psy16526 354 TINMLGTKRLVELCHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQK-IIETMEWMDDSLVNT 419 (422)
Q Consensus 354 ~~Nv~gt~~ll~~a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~-~y~~~K~~~E~~~~~ 419 (422)
++|+.|+..+.+++...- .-.++|++||..+... .| .+. .|..+|...+.+.+.
T Consensus 144 ~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~----------~~--~~~~~Y~asKaal~~~~~~ 199 (329)
T 3lt0_A 144 SKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV----------VP--GYGGGMSSAKAALESDTRV 199 (329)
T ss_dssp HHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CT--TCTTTHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCC----------CC--cchHHHHHHHHHHHHHHHH
Confidence 999999999999987631 0148999999765321 11 121 567777666655544
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.01 E-value=0.046 Score=50.50 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=63.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-----------hhHHHHHHhhHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-----------EALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-----------~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++.++++|+++++ +.+.+ ..++|+++|+||..... +.+...+++|+.++..+..+
T Consensus 58 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 131 (256)
T 4fs3_A 58 PEAHLYQIDVQSDE------EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHE 131 (256)
T ss_dssp SSCEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999873 32332 34789999999975321 22334578899999988888
Q ss_pred HHhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 367 CHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 367 a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+.... +-.++|.+||..+.. |...+..|+.+|..-+.+.+.
T Consensus 132 ~~~~~~~~G~IVnisS~~~~~------------~~~~~~~Y~asKaal~~ltr~ 173 (256)
T 4fs3_A 132 AKKLMPEGGSIVATTYLGGEF------------AVQNYNVMGVAKASLEANVKY 173 (256)
T ss_dssp HHTTCTTCEEEEEEECGGGTS------------CCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCEEEEEecccccc------------CcccchhhHHHHHHHHHHHHH
Confidence 76532 235899999975531 122345677777765555443
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0063 Score=57.54 Aligned_cols=92 Identities=15% Similarity=0.079 Sum_probs=65.5
Q ss_pred CCC-CEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNL-PVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~l-Pi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++ +++|+||+.|.+....+ .+. ...++.....|..-.++++++...+.|.||-|+++++.++ .+
T Consensus 161 ~~~~~~~ilRp~~v~G~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~----~~--- 226 (321)
T 3vps_A 161 SVAPEVGIVRFFNVYGPGERP-DAL------VPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALA----NR--- 226 (321)
T ss_dssp SSSCEEEEEEECEEECTTCCT-TSH------HHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGG----GS---
T ss_pred cCCCceEEEEeccccCcCCCC-CCh------HHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHH----hc---
Confidence 467 99999999999865443 111 1223333334555567788999999999999999877665 22
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+... +||++++ .++||.++.+.+. ...
T Consensus 227 ---~~~g-~~~i~~~--~~~s~~e~~~~i~-~~g 253 (321)
T 3vps_A 227 ---PLPS-VVNFGSG--QSLSVNDVIRILQ-ATS 253 (321)
T ss_dssp ---CCCS-EEEESCS--CCEEHHHHHHHHH-TTC
T ss_pred ---CCCC-eEEecCC--CcccHHHHHHHHH-HhC
Confidence 1224 9999987 6899999999988 543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.012 Score=56.18 Aligned_cols=78 Identities=12% Similarity=0.005 Sum_probs=45.3
Q ss_pred cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHhcC-CCceEEEEeCCccccCCCcccccccCCCC
Q psy16526 331 QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPY 400 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~ 400 (422)
.++|++||+||... +. +.++..+++|+.|+.++++++...- .-.++|++||..+... .
T Consensus 132 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~------------~ 199 (319)
T 2ptg_A 132 GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV------------I 199 (319)
T ss_dssp SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------
T ss_pred CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccc------------c
Confidence 37899999998531 11 3455678999999999999997641 0158999999765321 1
Q ss_pred CHH-HHHHHHhhCCHHHhhhc
Q psy16526 401 DPQ-KIIETMEWMDDSLVNTL 420 (422)
Q Consensus 401 ~p~-~~y~~~K~~~E~~~~~~ 420 (422)
... ..|+.+|...+.+.+.+
T Consensus 200 ~~~~~~Y~asKaal~~l~~~l 220 (319)
T 2ptg_A 200 PGYGGGMSSAKAALESDCRTL 220 (319)
T ss_dssp -------------THHHHHHH
T ss_pred CccchhhHHHHHHHHHHHHHH
Confidence 112 36888888888777654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.022 Score=53.12 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=61.0
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
+..++++|+++++ +.+.+ ..++|+++|+||... +. +.++..+++|+.|+.++.+++..
T Consensus 51 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 124 (261)
T 4h15_A 51 EELFVEADLTTKE------GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVP 124 (261)
T ss_dssp TTTEEECCTTSHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhch
Confidence 3457889999874 22222 246899999998532 21 34566799999999998887753
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+ -.++|++||..+.-. .|. ....|+.+|..-+.+.+.
T Consensus 125 ~m~~~~-~G~Iv~isS~~~~~~----------~~~-~~~~Y~asKaal~~lt~~ 166 (261)
T 4h15_A 125 DMVARG-SGVVVHVTSIQRVLP----------LPE-STTAYAAAKAALSTYSKA 166 (261)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC----------CTT-TCHHHHHHHHHHHHHHHH
T ss_pred hhhhcC-CceEEEEEehhhccC----------CCC-ccHHHHHHHHHHHHHHHH
Confidence 23 368999999754311 111 134566666655555443
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.018 Score=55.17 Aligned_cols=104 Identities=17% Similarity=0.069 Sum_probs=64.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccC--CCCcccccccc--ccceeeEEee------cCCcccccchhHHHHHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDN--YNGPTGIIAAA--GKGFFRTMLC------HENKVADLVPVDIVINLMICAA 76 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn--~~g~~g~~~~~--g~G~lr~~~~------~~~~~~DiVPvD~vvn~~i~aa 76 (422)
.+++++|+||+.|.+.......|.-+. .......+... |.|-.-.+++ +++...|+|.||-|+++++.++
T Consensus 176 ~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 255 (348)
T 1ek6_A 176 KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAAL 255 (348)
T ss_dssp TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred CCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHH
Confidence 359999999999988543222222111 01111222221 2332223444 5678889999999999988776
Q ss_pred HHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 77 WKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
-..... ....+||++++ .++|+.++.+.+.+...
T Consensus 256 ~~~~~~-------~g~~~~ni~~~--~~~s~~e~~~~i~~~~g 289 (348)
T 1ek6_A 256 RKLKEQ-------CGCRIYNLGTG--TGYSVLQMVQAMEKASG 289 (348)
T ss_dssp HHHTTT-------CCEEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred hccccc-------CCceEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 332101 12369999886 68999999999988654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0079 Score=58.83 Aligned_cols=96 Identities=9% Similarity=-0.002 Sum_probs=65.3
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcccccccccccee-eEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFF-RTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~l-r~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....+..|+.. ....++.....|.- -.++++++...+.|.||-|+++++.++- +
T Consensus 195 gi~~~ilrp~~v~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~----~---- 263 (379)
T 2c5a_A 195 GIECRIGRFHNIYGPFGTWKGGREK---APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK----S---- 263 (379)
T ss_dssp CCEEEEEEECCEECTTSCCSSSCCC---HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH----S----
T ss_pred CCCEEEEEeCceeCcCCCccccccc---HHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhh----c----
Confidence 6999999999999866554333211 11122222222321 2356788888999999999999877762 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
. ...+||++++ .++|+.++.+.+.+...
T Consensus 264 -~--~~~~~ni~~~--~~~s~~e~~~~i~~~~g 291 (379)
T 2c5a_A 264 -D--FREPVNIGSD--EMVSMNEMAEMVLSFEE 291 (379)
T ss_dssp -S--CCSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred -c--CCCeEEeCCC--CccCHHHHHHHHHHHhC
Confidence 1 2358999987 68999999999988654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0067 Score=57.54 Aligned_cols=106 Identities=8% Similarity=-0.012 Sum_probs=66.0
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCc-cccccccc----cc-eeeEEeecCCcccccchhHHHHHHHHHHHHHHhh
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGP-TGIIAAAG----KG-FFRTMLCHENKVADLVPVDIVINLMICAAWKTAV 81 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~-~g~~~~~g----~G-~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~ 81 (422)
+++++|+||+.|.+....+.++ ..+. ..++..+- .| .--.++++++...|.|.||-|+++++.++-....
T Consensus 155 ~~~~~ilrp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~ 230 (321)
T 1e6u_A 155 GRDYRSVMPTNLYGPHDNFHPS----NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHE 230 (321)
T ss_dssp CCEEEEEEECEEESTTCCCCTT----CSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHH
T ss_pred CCCEEEEEeCCcCCcCCCCCCC----CCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccc
Confidence 7999999999999865543221 0111 11111111 12 1223578889999999999999998877632211
Q ss_pred hhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 82 KYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 82 ~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
... ........+||++++ .++||.++.+.+.+....
T Consensus 231 ~~~-~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 266 (321)
T 1e6u_A 231 VWL-ENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGY 266 (321)
T ss_dssp HHH-HTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred ccc-cccccCCceEEeCCC--CCccHHHHHHHHHHHhCC
Confidence 000 000012369999886 689999999999886543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=95.75 E-value=0.0064 Score=58.72 Aligned_cols=98 Identities=18% Similarity=0.230 Sum_probs=63.8
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcccccccc--ccceeeEEeecC---CcccccchhHHHHHHHHHHHHHHhhh
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAA--GKGFFRTMLCHE---NKVADLVPVDIVINLMICAAWKTAVK 82 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~--g~G~lr~~~~~~---~~~~DiVPvD~vvn~~i~aa~~~~~~ 82 (422)
+++++|+||+.|.+....+.... ..+..++... ..|..-.+++++ ....+++.||-|+++++.++-+..
T Consensus 170 ~~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-- 243 (364)
T 2v6g_A 170 GLTWSVHRPGNIFGFSPYSMMNL----VGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY-- 243 (364)
T ss_dssp TCEEEEEEESSEECCCTTCSSCH----HHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--
T ss_pred CceEEEECCCceeCCCCCcccch----HHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC--
Confidence 49999999999998654322111 0111122222 134333456666 455889999999999887763211
Q ss_pred hccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 83 YKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 83 ~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 244 -------~~g~~~ni~~~--~~~s~~e~~~~i~~~~g~ 272 (364)
T 2v6g_A 244 -------AKNEAFNVSNG--DVFKWKHFWKVLAEQFGV 272 (364)
T ss_dssp -------GTTEEEEECCS--CCBCHHHHHHHHHHHHTC
T ss_pred -------CCCceEEecCC--CcCCHHHHHHHHHHHhCC
Confidence 12469999986 579999999999887654
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0035 Score=60.34 Aligned_cols=103 Identities=10% Similarity=0.076 Sum_probs=66.8
Q ss_pred CCCCEEEEccceeeeccC-CCccccccCC---------------CC-ccccccccccceeeEEeecCCccccc----chh
Q psy16526 7 GNLPVAIVRPSIVISSVN-EPVAGWVDNY---------------NG-PTGIIAAAGKGFFRTMLCHENKVADL----VPV 65 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~-eP~pGWidn~---------------~g-~~g~~~~~g~G~lr~~~~~~~~~~Di----VPv 65 (422)
.+++++|+||+.|.+... ...+|+..+- .+ ...++.....|..-.++++++...|. |.|
T Consensus 170 ~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v 249 (347)
T 4id9_A 170 GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDT 249 (347)
T ss_dssp SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEH
T ss_pred cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeH
Confidence 479999999999982111 1111111100 00 01122233345444677888888899 999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 66 DIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 66 D~vvn~~i~aa~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
|-|+++++.++-... ....+||++++ .++||.++.+.+.+....
T Consensus 250 ~Dva~ai~~~~~~~~---------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 293 (347)
T 4id9_A 250 RDMVAGILLALDHPE---------AAGGTFNLGAD--EPADFAALLPKIAALTGL 293 (347)
T ss_dssp HHHHHHHHHHHHCGG---------GTTEEEEESCS--SCEEHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCcc---------cCCCeEEECCC--CcccHHHHHHHHHHHhCC
Confidence 999999888763221 12569999987 689999999999887653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0067 Score=57.93 Aligned_cols=95 Identities=15% Similarity=0.028 Sum_probs=63.0
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
++|++|+||+.|.+....+ ++..+ ....++.....|. .....++++...|.|.||-|+++++.++- +
T Consensus 181 ~~~~~i~r~~~v~Gp~~~~--~~~~~--~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~----~---- 248 (335)
T 1rpn_A 181 GLHASSGILFNHESPLRGI--EFVTR--KVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ----Q---- 248 (335)
T ss_dssp CCCEEEEEECCEECTTSCT--TSHHH--HHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH----S----
T ss_pred CCcEEEEeeCcccCCCCCC--CcchH--HHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHh----c----
Confidence 6999999999988743211 11100 0111222223342 22356888899999999999999877762 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+ ...+||++++ .++||.++.+.+.+...
T Consensus 249 --~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g 276 (335)
T 1rpn_A 249 --D-KADDYVVATG--VTTTVRDMCQIAFEHVG 276 (335)
T ss_dssp --S-SCCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred --C-CCCEEEEeCC--CCccHHHHHHHHHHHhC
Confidence 1 1368999986 58999999999887654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.01 Score=64.28 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=54.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhcC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 371 (422)
.++.++.+|++|+ ++++.+++ .+|.|||+|+.... .+.++..+++|+.|+.++.+++..
T Consensus 584 ~~v~~~~~Dvsd~------~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-- 655 (795)
T 3slk_A 584 AEVSLQACDVADR------ETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-- 655 (795)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--
T ss_pred CcEEEEEeecCCH------HHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 5688999999997 34455543 46999999997541 134566799999999999998833
Q ss_pred CCceEEEEeCCccc
Q psy16526 372 HLEALIHVSTAYCN 385 (422)
Q Consensus 372 ~~~r~v~~SS~~~~ 385 (422)
.. +||.+||..+.
T Consensus 656 ~l-~iV~~SS~ag~ 668 (795)
T 3slk_A 656 DV-ALVLFSSVSGV 668 (795)
T ss_dssp TS-EEEEEEETHHH
T ss_pred CC-EEEEEccHHhc
Confidence 25 89999998553
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.015 Score=55.39 Aligned_cols=79 Identities=13% Similarity=0.016 Sum_probs=51.9
Q ss_pred cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHhcC-CCceEEEEeCCccccCCCcccccccCCCC
Q psy16526 331 QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHEMT-HLEALIHVSTAYCNCDREEVREIIYSPPY 400 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~ 400 (422)
.++|++||+||... +. +.++..+++|+.|+.++++++...- .-.++|++||..+.... |.
T Consensus 119 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~~ 188 (315)
T 2o2s_A 119 GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV----------PG 188 (315)
T ss_dssp CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC----------TT
T ss_pred CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC----------CC
Confidence 37899999998542 11 3455679999999999999997531 01589999997653211 11
Q ss_pred CHHHHHHHHhhCCHHHhhhc
Q psy16526 401 DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 401 ~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ...|+.+|...+.+.+.+
T Consensus 189 ~-~~~Y~asKaal~~l~~~l 207 (315)
T 2o2s_A 189 Y-GGGMSSAKAALESDTRTL 207 (315)
T ss_dssp C-CTTHHHHHHHHHHHHHHH
T ss_pred c-cHHHHHHHHHHHHHHHHH
Confidence 0 024677777666665543
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.025 Score=65.74 Aligned_cols=92 Identities=11% Similarity=0.055 Sum_probs=63.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh----c---------CccEEEEcccccChh----------hhHHHHHHhhHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK----Q---------NVSVVFHSAATVKFD----------EALKLSVTINMLGTK 361 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~----~---------~~d~ViH~Aa~~~~~----------~~~~~~~~~Nv~gt~ 361 (422)
.++.++.+|++|++ +++.++ + ++|++||+||..... +.++..+++|+.|+.
T Consensus 730 ~~v~~v~~DVsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~ 803 (1887)
T 2uv8_A 730 STLIVVPFNQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM 803 (1887)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHH
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHH
Confidence 46889999999873 333332 1 489999999975321 234567999999999
Q ss_pred HHHHHHHhcCC-----CceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 362 RLVELCHEMTH-----LEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 362 ~ll~~a~~~~~-----~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
+++++++..+. -.++|++||..+... ....|+.+|...+.+
T Consensus 804 ~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--------------g~~aYaASKAAL~~L 849 (1887)
T 2uv8_A 804 GCVKKQKSARGIETRPAQVILPMSPNHGTFG--------------GDGMYSESKLSLETL 849 (1887)
T ss_dssp HHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--------------CBTTHHHHHHHGGGH
T ss_pred HHHHHHHhhhhhhhCCCCEEEEEcChHhccC--------------CCchHHHHHHHHHHH
Confidence 99998854321 258999999754321 123578888777766
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.021 Score=53.25 Aligned_cols=87 Identities=9% Similarity=0.032 Sum_probs=62.1
Q ss_pred CCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCCC
Q psy16526 9 LPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSNG 88 (422)
Q Consensus 9 lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~ 88 (422)
++++|+||+.|.+.... .++..+.. . . ..++++...|.|.||-|+++++.++-....
T Consensus 147 ~~~~ilR~~~v~G~~~~---~~~~~~~~--~------~-----~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~------- 203 (286)
T 3gpi_A 147 YSSTILRFSGIYGPGRL---RMIRQAQT--P------E-----QWPARNAWTNRIHRDDGAAFIAYLIQQRSH------- 203 (286)
T ss_dssp SSEEEEEECEEEBTTBC---HHHHHTTC--G------G-----GSCSSBCEECEEEHHHHHHHHHHHHHHHTT-------
T ss_pred CCeEEEecccccCCCch---hHHHHHHh--c------c-----cCCCcCceeEEEEHHHHHHHHHHHHhhhcc-------
Confidence 89999999999985543 22222222 1 1 136677888999999999998877644310
Q ss_pred CCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 89 AQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 89 ~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++|+.++.+.+.+....
T Consensus 204 ~~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~ 233 (286)
T 3gpi_A 204 AVPERLYIVTDN--QPLPVHDLLRWLADRQGI 233 (286)
T ss_dssp SCCCSEEEECCS--CCEEHHHHHHHHHHHTTC
T ss_pred CCCCceEEEeCC--CCCCHHHHHHHHHHHcCC
Confidence 123569999886 689999999999887654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.015 Score=56.09 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=46.0
Q ss_pred HHHHHHhcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 324 NDQKILKQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 324 ~~~~~~~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.++.+.++++|+|||+|+...-. .+..+....|+.+++++++.+++.+ .+.+|+++|.
T Consensus 68 ~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SN 126 (326)
T 1smk_A 68 QQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISN 126 (326)
T ss_dssp HHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCS
T ss_pred CCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence 35667789999999999976432 2334568899999999999999976 6788888885
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.0089 Score=56.24 Aligned_cols=96 Identities=14% Similarity=0.098 Sum_probs=54.1
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCcc-ccccccccceeeEEeecCCc-ccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPT-GIIAAAGKGFFRTMLCHENK-VADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~-g~~~~~g~G~lr~~~~~~~~-~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.+++++|+||+.|.+....+.. +..+.. .++-....|..-.++++++. ..+.|.||-|+++++.++- +
T Consensus 158 ~g~~~~~lrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~----~-- 227 (310)
T 1eq2_A 158 ANSQIVGFRYFNVYGPREGHKG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE----N-- 227 (310)
T ss_dssp CSSCEEEEEECEEESSSCGGGG----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHH----H--
T ss_pred cCCCEEEEeCCcEECcCCCCCC----ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHh----c--
Confidence 3799999999999886543211 111111 11222223333345677788 8899999999999877662 2
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
. . ..+||++++ .++|+.++.+.+.+...
T Consensus 228 ---~-~-~~~~~i~~~--~~~s~~e~~~~i~~~~g 255 (310)
T 1eq2_A 228 ---G-V-SGIFNLGTG--RAESFQAVADATLAYHK 255 (310)
T ss_dssp ---C-C-CEEEEESCS--CCBCHHHHHHHC-----
T ss_pred ---C-C-CCeEEEeCC--CccCHHHHHHHHHHHcC
Confidence 1 2 569999986 58999999998876543
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.017 Score=55.11 Aligned_cols=94 Identities=13% Similarity=0.096 Sum_probs=64.4
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
+++++|+||+.|.+....| .+++ ..++.....|..-.++++++...+.+.||-|+++++.++-+ .
T Consensus 170 g~~~~ilrp~~v~G~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~------- 234 (337)
T 1r6d_A 170 GLDVRITRCCNNYGPYQHP-EKLI------PLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG-G------- 234 (337)
T ss_dssp CCCEEEEEECEEECTTCCT-TSHH------HHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH-C-------
T ss_pred CCCEEEEEeeeeECCCCCC-CChH------HHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC-C-------
Confidence 6999999999998865432 1111 11222222333234567888888999999999998776521 1
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++||.++.+.+.+....
T Consensus 235 --~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 263 (337)
T 1r6d_A 235 --RAGEIYHIGGG--LELTNRELTGILLDSLGA 263 (337)
T ss_dssp --CTTCEEEECCC--CEEEHHHHHHHHHHHHTC
T ss_pred --CCCCEEEeCCC--CCccHHHHHHHHHHHhCC
Confidence 13469999986 689999999998886653
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.02 Score=53.74 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=64.8
Q ss_pred ccCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 5 ESGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 5 ~~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
...+++++|+||++|.+.. .|++..+.- ....|.+ ...++++...+.|=||=++++++.++-+
T Consensus 146 ~~~~~~~~~~r~~~v~g~~----~~~~~~~~~----~~~~~~~---~~~g~g~~~~~~ihv~Dva~a~~~~~~~------ 208 (298)
T 4b4o_A 146 PGDSTRQVVVRSGVVLGRG----GGAMGHMLL----PFRLGLG---GPIGSGHQFFPWIHIGDLAGILTHALEA------ 208 (298)
T ss_dssp SSSSSEEEEEEECEEECTT----SHHHHHHHH----HHHTTCC---CCBTTSCSBCCEEEHHHHHHHHHHHHHC------
T ss_pred hccCCceeeeeeeeEEcCC----CCchhHHHH----HHhcCCc---ceecccCceeecCcHHHHHHHHHHHHhC------
Confidence 3567899999999998843 233322211 1112222 2358889999999999999988776521
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
++...+||++++ +|+|+.++.+.+.+...+
T Consensus 209 ----~~~~g~yn~~~~--~~~t~~e~~~~ia~~lgr 238 (298)
T 4b4o_A 209 ----NHVHGVLNGVAP--SSATNAEFAQTFGAALGR 238 (298)
T ss_dssp ----TTCCEEEEESCS--CCCBHHHHHHHHHHHHTC
T ss_pred ----CCCCCeEEEECC--CccCHHHHHHHHHHHhCc
Confidence 123459999987 799999999999887664
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.011 Score=66.84 Aligned_cols=92 Identities=11% Similarity=0.058 Sum_probs=62.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh----c---------CccEEEEcccccCh----------hhhHHHHHHhhHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK----Q---------NVSVVFHSAATVKF----------DEALKLSVTINMLGTK 361 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~----~---------~~d~ViH~Aa~~~~----------~~~~~~~~~~Nv~gt~ 361 (422)
.++.++.+|++|++ +++.++ + ++|++||+||.... .+.++..+++|+.|+.
T Consensus 531 a~V~vV~~DVTD~e------sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~ 604 (1688)
T 2pff_A 531 STLIVVPFNQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM 604 (1688)
T ss_dssp CEEEEEECCSSSTT------HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHH
T ss_pred CeEEEEEeCCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHH
Confidence 46889999999985 223322 1 48999999996532 1334567899999999
Q ss_pred HHHHHHHhcC-----CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 362 RLVELCHEMT-----HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 362 ~ll~~a~~~~-----~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
+++++++..+ +-.++|++||..+... ....|+.+|...+.+
T Consensus 605 ~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--------------g~saYaASKAAL~aL 650 (1688)
T 2pff_A 605 GCVKKQKSARGIETRPAQVILPMSPNHGTFG--------------GDGMYSESKLSLETL 650 (1688)
T ss_dssp HHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--------------CBTTHHHHHHHHTHH
T ss_pred HHHHHHHhChHHHhCCCCEEEEEEChHhccC--------------CchHHHHHHHHHHHH
Confidence 9999884321 1258999999754321 123577777766665
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.014 Score=67.66 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=61.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-----c------CccEEEEcccccChh----------hhHHHHHHhhHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-----Q------NVSVVFHSAATVKFD----------EALKLSVTINMLGTKRL 363 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-----~------~~d~ViH~Aa~~~~~----------~~~~~~~~~Nv~gt~~l 363 (422)
.++.++.+|++|++ +++.++ . ++|+|||+||..... +.++..+++|+.|+.++
T Consensus 707 ~~v~~v~~DVsd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l 780 (1878)
T 2uv9_A 707 SQLVVVPFNQGSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGA 780 (1878)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHH
Confidence 46889999999873 333332 1 489999999975321 33456799999999999
Q ss_pred HHHHHhcC-----CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHh
Q psy16526 364 VELCHEMT-----HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLV 417 (422)
Q Consensus 364 l~~a~~~~-----~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~ 417 (422)
+++++... +..++|++||..+... . .+.|+.+|...+.+.
T Consensus 781 ~~a~~~lp~M~~~~~G~IVnISS~ag~~g-----------g---~~aYaASKAAL~aLt 825 (1878)
T 2uv9_A 781 IKTQKKERGYETRPAQVILPLSPNHGTFG-----------N---DGLYSESKLALETLF 825 (1878)
T ss_dssp HHHHHHHHTCCSCCEEECCEECSCSSSSS-----------C---CSSHHHHHHHHTTHH
T ss_pred HHHHHHhHHHHhCCCCEEEEEcchhhccC-----------C---chHHHHHHHHHHHHH
Confidence 88743221 1258999999754321 0 235777777666553
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.013 Score=56.12 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=43.1
Q ss_pred HHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 327 KILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 327 ~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.+.++++|+|||+||...- ..+..+.++.|+.+++++++++++.+ +++++++|.
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SN 123 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITN 123 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSS
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecC
Confidence 3456899999999997653 23445678999999999999999976 678888775
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.017 Score=55.27 Aligned_cols=94 Identities=13% Similarity=0.040 Sum_probs=64.7
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
+++++|+||+.|.+....| .+++ ..++.....|..-.++++++...+.+.||-|+++++.++-. .
T Consensus 180 gi~~~ilrp~~v~G~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~------- 244 (348)
T 1oc2_A 180 GVKATISNCSNNYGPYQHI-EKFI------PRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK-G------- 244 (348)
T ss_dssp CCEEEEEEECCEESTTCCT-TSHH------HHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH-C-------
T ss_pred CCCEEEEeeceeeCCCCCc-cchH------HHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhC-C-------
Confidence 6999999999998865432 1111 11122222333334567888888999999999998877621 1
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 245 --~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 273 (348)
T 1oc2_A 245 --RMGETYLIGAD--GEKNNKEVLELILEKMGQ 273 (348)
T ss_dssp --CTTCEEEECCS--CEEEHHHHHHHHHHHTTC
T ss_pred --CCCCeEEeCCC--CCCCHHHHHHHHHHHhCC
Confidence 13469999886 689999999999887654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.019 Score=55.42 Aligned_cols=97 Identities=14% Similarity=0.109 Sum_probs=64.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCcc-ccccccccceeeEEeecCCc-ccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPT-GIIAAAGKGFFRTMLCHENK-VADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~-g~~~~~g~G~lr~~~~~~~~-~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.+++++|+||+.|.+....+. +. ..+.. .++.....|-.-.++++++. ..+.|.||-|+++++.++- +
T Consensus 205 ~g~~~~ilRp~~v~Gp~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~----~-- 274 (357)
T 2x6t_A 205 ANSQIVGFRYFNVYGPREGHK-GS---MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE----N-- 274 (357)
T ss_dssp CSSCEEEEEECEEESSSCTTC-GG---GSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH----H--
T ss_pred cCCCEEEEecCeEECCCCCCC-cc---cchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh----c--
Confidence 369999999999988654321 11 11111 11122223333345677777 8899999999999877762 2
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
. . ..+||++++ .++||.++.+.+.+....
T Consensus 275 ---~-~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 303 (357)
T 2x6t_A 275 ---G-V-SGIFNLGTG--RAESFQAVADATLAYHKK 303 (357)
T ss_dssp ---C-C-CEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred ---C-C-CCeEEecCC--CcccHHHHHHHHHHHcCC
Confidence 1 1 569999986 589999999999887653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.031 Score=53.30 Aligned_cols=104 Identities=19% Similarity=0.092 Sum_probs=62.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccCC--CCcccccccc--ccceeeEEee------cCCcccccchhHHHHHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNY--NGPTGIIAAA--GKGFFRTMLC------HENKVADLVPVDIVINLMICAA 76 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~--~g~~g~~~~~--g~G~lr~~~~------~~~~~~DiVPvD~vvn~~i~aa 76 (422)
.+++++|+||+.|.+.....+.|--+.. ......+... |.+-.-.+.+ +++...|+|.||-|+++++.++
T Consensus 168 ~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l 247 (338)
T 1udb_A 168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAM 247 (338)
T ss_dssp TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHH
Confidence 3799999999999875432222211110 1111122111 1221112333 4566779999999999988776
Q ss_pred HHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 77 WKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
-.... .....+||++++ .++|+.++.+.+.+...
T Consensus 248 ~~~~~-------~~~~~~yni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T 1udb_A 248 EKLAN-------KPGVHIYNLGAG--VGNSVLDVVNAFSKACG 281 (338)
T ss_dssp HHHTT-------CCEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred hhhhc-------cCCCcEEEecCC--CceeHHHHHHHHHHHhC
Confidence 32210 112369999886 68999999999887654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=95.07 E-value=0.021 Score=60.38 Aligned_cols=105 Identities=10% Similarity=-0.002 Sum_probs=69.3
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCC-ccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNG-PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g-~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....+..++.-+..+ ...++..+..|..-.++++++...+++.||-|+++++.++.....
T Consensus 482 gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~----- 556 (660)
T 1z7e_A 482 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN----- 556 (660)
T ss_dssp CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGG-----
T ss_pred CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccc-----
Confidence 79999999999998765543221111111 112222233344445677888899999999999998877632211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .+++||.++.+.+.+....
T Consensus 557 --~~~g~~~ni~~~-~~~~s~~el~~~i~~~~g~ 587 (660)
T 1z7e_A 557 --RCDGEIINIGNP-ENEASIEELGEMLLASFEK 587 (660)
T ss_dssp --TTTTEEEEECCG-GGEEEHHHHHHHHHHHHHH
T ss_pred --cCCCeEEEECCC-CCCcCHHHHHHHHHHHhcC
Confidence 013479999875 2489999999998887654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.024 Score=53.99 Aligned_cols=95 Identities=18% Similarity=0.164 Sum_probs=62.1
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+....|- +.+ ..++...-.|..-.++++++...+.+.||-|+++++.++-. .
T Consensus 169 ~~~~~~ilrp~~v~g~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~------ 234 (336)
T 2hun_A 169 YNLNASITRCTNNYGPYQFPE-KLI------PKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK-G------ 234 (336)
T ss_dssp TTCEEEEEEECEEESTTCCTT-SHH------HHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHH-C------
T ss_pred hCCCEEEEeeeeeeCcCCCcC-chH------HHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhC-C------
Confidence 369999999999988654320 111 11111222233234567788888999999999998776521 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 235 ---~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 263 (336)
T 2hun_A 235 ---ESREIYNISAG--EEKTNLEVVKIILRLMGK 263 (336)
T ss_dssp ---CTTCEEEECCS--CEECHHHHHHHHHHHTTC
T ss_pred ---CCCCEEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 13469999886 689999999998887654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.039 Score=52.99 Aligned_cols=94 Identities=9% Similarity=-0.046 Sum_probs=62.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|.+|+||+.+.+... |++ ..+. .....+-.-.++++++...+.|.+|-|+.+++.++-+..
T Consensus 150 ~g~~~tivrpg~~~g~~~---~~~----~~~~---~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~------ 213 (346)
T 3i6i_A 150 SGIPFTYICCNSIASWPY---YNN----IHPS---EVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR------ 213 (346)
T ss_dssp TTCCBEEEECCEESSCCC---SCC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG------
T ss_pred cCCCEEEEEecccccccC---ccc----cccc---cccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc------
Confidence 579999999999877331 221 1111 111122234578899999999999999999877763211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++. ..+++||.|+.+...+...+
T Consensus 214 ---~~~~~~~i~g-~~~~~s~~e~~~~~~~~~g~ 243 (346)
T 3i6i_A 214 ---TLNKSVHFRP-SCNCLNINELASVWEKKIGR 243 (346)
T ss_dssp ---GTTEEEECCC-GGGEECHHHHHHHHHHHHTS
T ss_pred ---ccCeEEEEeC-CCCCCCHHHHHHHHHHHHCC
Confidence 1246888873 34789999999999886553
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.033 Score=53.03 Aligned_cols=53 Identities=9% Similarity=-0.091 Sum_probs=43.2
Q ss_pred HhcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 329 LKQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 329 ~~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
.++++|+|||+|+...-. .+..+.++.|+.+++++++++++.+ .+.+++++|.
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SN 120 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSN 120 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCS
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCC
Confidence 467999999999976532 3445668999999999999999986 7888888875
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.012 Score=60.31 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=60.2
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
..+++++|+||+.|.+... |.+..+ +..+..|.. ...++++...+.|.||-|+++++.++-+
T Consensus 294 ~~gi~~~ilRp~~v~Gp~~----~~~~~~------~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~------- 355 (516)
T 3oh8_A 294 DAGKRVAFIRTGVALSGRG----GMLPLL------KTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVD------- 355 (516)
T ss_dssp HTTCEEEEEEECEEEBTTB----SHHHHH------HHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHC-------
T ss_pred hCCCCEEEEEeeEEECCCC----ChHHHH------HHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhC-------
Confidence 4579999999999988432 222111 111122222 2568888999999999999998777622
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+....+||++++ +++||.++.+.+.+...
T Consensus 356 ---~~~~g~~ni~~~--~~~s~~el~~~i~~~~g 384 (516)
T 3oh8_A 356 ---AQISGPINAVAP--NPVSNADMTKILATSMH 384 (516)
T ss_dssp ---TTCCEEEEESCS--CCEEHHHHHHHTTC---
T ss_pred ---cccCCcEEEECC--CCCCHHHHHHHHHHHhC
Confidence 122358999987 78999999998766443
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.027 Score=54.23 Aligned_cols=94 Identities=14% Similarity=0.067 Sum_probs=64.6
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
+++++|+||+.|.+....| .+++ ..++.....|..-.++++++...+.+.||-|+++++.++-. .
T Consensus 186 gi~~~~vrp~~v~G~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~------- 250 (361)
T 1kew_A 186 GLPTIVTNCSNNYGPYHFP-EKLI------PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE-G------- 250 (361)
T ss_dssp CCCEEEEEECEEESTTCCT-TSHH------HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH-C-------
T ss_pred CCcEEEEeeceeECCCCCc-ccHH------HHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhC-C-------
Confidence 6999999999998865432 1111 11222222333234567888888999999999998877622 1
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 251 --~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 279 (361)
T 1kew_A 251 --KAGETYNIGGH--NEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp --CTTCEEEECCC--CEEEHHHHHHHHHHHHHH
T ss_pred --CCCCEEEecCC--CeeeHHHHHHHHHHHhCC
Confidence 23469999987 589999999998886554
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=94.57 E-value=0.17 Score=47.48 Aligned_cols=97 Identities=12% Similarity=0.018 Sum_probs=62.6
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccc-cceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAG-KGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g-~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++++|+||+.|.+....|-.+++..+ +-... .|..-.+ .++...+.+.+|-|+++++.++-+....
T Consensus 148 ~~~~~~lR~~~v~G~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~~~~~---- 215 (315)
T 2ydy_A 148 NLGAAVLRIPILYGEVEKLEESAVTVM------FDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEKRMLD---- 215 (315)
T ss_dssp CTTCEEEEECSEECSCSSGGGSTTGGG------HHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHHHHTC----
T ss_pred CCCeEEEeeeeeeCCCCcccccHHHHH------HHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHhhccc----
Confidence 468899999999976654332333221 11111 2221122 3456789999999999988776443111
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++||.++.+.+.+....
T Consensus 216 --~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 245 (315)
T 2ydy_A 216 --PSIKGTFHWSGN--EQMTKYEMACAIADAFNL 245 (315)
T ss_dssp --TTCCEEEECCCS--CCBCHHHHHHHHHHHTTC
T ss_pred --cCCCCeEEEcCC--CcccHHHHHHHHHHHhCC
Confidence 123579999987 589999999999886654
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=94.53 E-value=0.04 Score=53.04 Aligned_cols=56 Identities=9% Similarity=-0.096 Sum_probs=44.6
Q ss_pred HHHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcC-CCceEEEEeC
Q psy16526 326 QKILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMT-HLEALIHVST 381 (422)
Q Consensus 326 ~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~r~v~~SS 381 (422)
..+.++++|+|||+||...- ..+..+.++.|+.+++++++++++.+ .-.+++++|.
T Consensus 77 ~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 77 PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 46677899999999997653 33455678999999999999999873 3348998886
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.28 E-value=0.087 Score=48.83 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=58.3
Q ss_pred CEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCCCC
Q psy16526 10 PVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSNGA 89 (422)
Q Consensus 10 Pi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~~ 89 (422)
+.+|+||+.|.+.... +++. .++-....|..-.+.+ +...+.|.+|-++++++.++ .+ +
T Consensus 147 ~~~ilR~~~v~G~~~~---~~~~------~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~----~~------~ 205 (287)
T 3sc6_A 147 KYFIVRTSWLYGKYGN---NFVK------TMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLI----HT------S 205 (287)
T ss_dssp SEEEEEECSEECSSSC---CHHH------HHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHH----TS------C
T ss_pred CcEEEeeeeecCCCCC---cHHH------HHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHH----hC------C
Confidence 7899999999884332 1111 1121222233233344 37779999999999987765 21 1
Q ss_pred CCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 90 QGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 90 ~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
...+||++++ .++||.++.+.+.+....
T Consensus 206 -~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 233 (287)
T 3sc6_A 206 -LYGTYHVSNT--GSCSWFEFAKKIFSYANM 233 (287)
T ss_dssp -CCEEEECCCB--SCEEHHHHHHHHHHHHTC
T ss_pred -CCCeEEEcCC--CcccHHHHHHHHHHHcCC
Confidence 2569999997 589999999999887654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=94.27 E-value=0.044 Score=51.78 Aligned_cols=93 Identities=11% Similarity=0.030 Sum_probs=62.8
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcccccccccc---c--eeeEEeecCCcccccchhHHHHHHHHHHHHHHhhh
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGK---G--FFRTMLCHENKVADLVPVDIVINLMICAAWKTAVK 82 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~---G--~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~ 82 (422)
+++++|+||+.|.+....+ .+++. .++..... | ..-...++++...+.+.||-|+++++.++-..
T Consensus 171 gi~~~ilrp~~v~g~~~~~-~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--- 240 (321)
T 2pk3_A 171 GMDIIHTRTFNHIGPGQSL-GFVTQ------DFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG--- 240 (321)
T ss_dssp CCEEEEEEECEEECTTCCT-TSHHH------HHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC---
T ss_pred CCCEEEEEeCcccCcCCCC-CchHH------HHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC---
Confidence 7999999999998855432 11111 11111111 3 12245677788889999999999987776321
Q ss_pred hccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 83 YKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 83 ~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ .++||.++.+.+.+...
T Consensus 241 -------~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 268 (321)
T 2pk3_A 241 -------KTGDVYNVCSG--IGTRIQDVLDLLLAMAN 268 (321)
T ss_dssp -------CTTCEEEESCS--CEEEHHHHHHHHHHHSS
T ss_pred -------CCCCeEEeCCC--CCeeHHHHHHHHHHHhC
Confidence 12469999886 58999999999988654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=94.16 E-value=0.073 Score=56.45 Aligned_cols=109 Identities=13% Similarity=-0.033 Sum_probs=64.4
Q ss_pred CCCCEEEEccceeeeccCCCccccccC--CCCcccccccc--ccceeeEEee------cCCcccccchhHHHHHHHHHHH
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDN--YNGPTGIIAAA--GKGFFRTMLC------HENKVADLVPVDIVINLMICAA 76 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn--~~g~~g~~~~~--g~G~lr~~~~------~~~~~~DiVPvD~vvn~~i~aa 76 (422)
.+++++|+||+.|.+.....+.|--+. .......+... +.+..-.+++ +++...|.|.||-|+++++.++
T Consensus 183 ~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~ 262 (699)
T 1z45_A 183 KSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAAL 262 (699)
T ss_dssp TSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHH
T ss_pred CCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHH
Confidence 579999999999988432111111000 01111122221 2211112333 6778899999999999988877
Q ss_pred HHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 77 WKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....... .......+||++++ .++|+.++.+.+.+....
T Consensus 263 ~~~~~~~---~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~ 301 (699)
T 1z45_A 263 QYLEAYN---ENEGLCREWNLGSG--KGSTVFEVYHAFCKASGI 301 (699)
T ss_dssp HHHHHSC---TTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred hhhhccc---cccCCceEEEECCC--CCCcHHHHHHHHHHHhCC
Confidence 5432100 00122469999987 579999999998886553
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=93.90 E-value=0.029 Score=52.78 Aligned_cols=98 Identities=14% Similarity=0.062 Sum_probs=62.7
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccc-cccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAA-AGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~-~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....|-.+.. +.....+.. ...|- ...+++++...|.|.||-|+++++.++-.....
T Consensus 162 ~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~---- 233 (312)
T 2yy7_A 162 GVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKK-YECFLSSETKMPMMYMDDAIDATINIMKAPVEK---- 233 (312)
T ss_dssp CCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSE-EEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG----
T ss_pred CCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCC-eEEecCCCceeeeeeHHHHHHHHHHHHhCcccc----
Confidence 699999999999986554432211 111122221 12233 235677888899999999999988776321110
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
.....+||+++ .++|+.++.+.+.+..
T Consensus 234 --~~~~~~~ni~~---~~~s~~e~~~~i~~~~ 260 (312)
T 2yy7_A 234 --IKIHSSYNLAA---MSFTPTEIANEIKKHI 260 (312)
T ss_dssp --CCCSSCEECCS---EEECHHHHHHHHHTTC
T ss_pred --cccCceEEeCC---CccCHHHHHHHHHHHC
Confidence 00126999974 4799999999887654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=93.89 E-value=0.13 Score=49.82 Aligned_cols=95 Identities=11% Similarity=-0.052 Sum_probs=61.3
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceee-EEeecCCcccccchh-HHHHHHHHHHHHHHhhhhcc
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFR-TMLCHENKVADLVPV-DIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr-~~~~~~~~~~DiVPv-D~vvn~~i~aa~~~~~~~~~ 85 (422)
+++++|+||++++.... .++..... ......|.+. .++++++...+.|.| |-|+++++.++-+....
T Consensus 142 gi~~~ivrpg~~g~~~~-------~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~--- 210 (352)
T 1xgk_A 142 GLPSTFVYAGIYNNNFT-------SLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK--- 210 (352)
T ss_dssp SSCEEEEEECEEGGGCB-------SSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH---
T ss_pred CCCEEEEecceecCCch-------hccccccc-ccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh---
Confidence 79999999998764321 11111100 1112345443 457778889999999 89999987776432110
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||+++ .++||.++.+...+...+
T Consensus 211 ----~~g~~~~l~~---~~~s~~e~~~~i~~~~G~ 238 (352)
T 1xgk_A 211 ----WNGHRIALTF---ETLSPVQVCAAFSRALNR 238 (352)
T ss_dssp ----HTTCEEEECS---EEECHHHHHHHHHHHHTS
T ss_pred ----hCCeEEEEec---CCCCHHHHHHHHHHHHCC
Confidence 0246999984 369999999999886654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=93.81 E-value=0.043 Score=53.22 Aligned_cols=95 Identities=18% Similarity=-0.002 Sum_probs=62.2
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.+.+.... ++|+.+. ...++.....|. .....++++...|.|.||-|+++++.++- +
T Consensus 199 ~~~~~i~r~~~~~gp~~~--~~~~~~~--~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~----~---- 266 (375)
T 1t2a_A 199 NLFAVNGILFNHESPRRG--ANFVTRK--ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ----N---- 266 (375)
T ss_dssp CCEEEEEEECCEECTTSC--TTSHHHH--HHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHH----S----
T ss_pred CCCEEEEecccccCCCCC--CCcchHH--HHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHh----c----
Confidence 689999999988763321 1221110 011111122232 22456888899999999999999877751 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ .++||.++.+.+.+...
T Consensus 267 ---~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 294 (375)
T 1t2a_A 267 ---DEPEDFVIATG--EVHSVREFVEKSFLHIG 294 (375)
T ss_dssp ---SSCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred ---CCCceEEEeCC--CcccHHHHHHHHHHHhC
Confidence 11368999886 58999999999988654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=93.44 E-value=0.077 Score=50.57 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=57.1
Q ss_pred CEEEEccceeeeccC--CCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 10 PVAIVRPSIVISSVN--EPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 10 Pi~IvRPsIV~~~~~--eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
+++|+||+.|.+... ..+|+++. ....|. .+++ ++...+.+.+|-|+++++.++ .+
T Consensus 180 ~~~ilR~~~v~gp~~~~~~~~~~~~----------~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~----~~----- 237 (333)
T 2q1w_A 180 DFVTFRLANVVGPRNVSGPLPIFFQ----------RLSEGK--KCFV-TKARRDFVFVKDLARATVRAV----DG----- 237 (333)
T ss_dssp CEEEEEESEEESTTCCSSHHHHHHH----------HHHTTC--CCEE-EECEECEEEHHHHHHHHHHHH----TT-----
T ss_pred CeEEEeeceEECcCCcCcHHHHHHH----------HHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHH----hc-----
Confidence 899999998877441 11122221 111232 2344 566789999999999987765 11
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+. ..+||++++ .++||.++.+.+.+....
T Consensus 238 -~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 266 (333)
T 2q1w_A 238 -VG-HGAYHFSSG--TDVAIKELYDAVVEAMAL 266 (333)
T ss_dssp -CC-CEEEECSCS--CCEEHHHHHHHHHHHTTC
T ss_pred -CC-CCEEEeCCC--CCccHHHHHHHHHHHhCC
Confidence 12 579999886 589999999999886543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=93.41 E-value=0.062 Score=50.59 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=61.5
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccc-cccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAA-AGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~-~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+....|-.++.+. ....+.. ...|.. ..+++++...|.|.||-++++++.++-.....
T Consensus 156 ~~~~~~lR~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~---- 227 (317)
T 3ajr_A 156 GLDVRSLRYPGIISYKAEPTAGTTDY---AVEIFYYAVKREKY-KCYLAPNRALPMMYMPDALKALVDLYEADRDK---- 227 (317)
T ss_dssp CCEEEEEEECEEECSSSCCCSCSSTH---HHHHHHHHHTTCCE-EECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG----
T ss_pred CCeEEEEecCcEeccCCCCCCcchhH---HHHHHHHHHhCCCc-eeecCccceeeeeEHHHHHHHHHHHHhCCccc----
Confidence 69999999888888665554333221 1111211 122322 34567788899999999999987766321110
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHH
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFES 117 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~ 117 (422)
.....+||+++ .++|+.++.+.+.+.
T Consensus 228 --~~~g~~~~i~~---~~~s~~e~~~~i~~~ 253 (317)
T 3ajr_A 228 --LVLRNGYNVTA---YTFTPSELYSKIKER 253 (317)
T ss_dssp --CSSCSCEECCS---EEECHHHHHHHHHTT
T ss_pred --cccCceEecCC---ccccHHHHHHHHHHH
Confidence 01236999985 379999999888764
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=93.33 E-value=0.2 Score=46.33 Aligned_cols=89 Identities=11% Similarity=0.150 Sum_probs=59.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.+.+.. +++++.. ....|.. ....++...+.+.+|-|+++++.++-+
T Consensus 131 ~~~~~~ilrp~~~~~~~---~~~~~~~---------~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~-------- 188 (287)
T 2jl1_A 131 TNIPYTFLRNALYTDFF---VNEGLRA---------STESGAI--VTNAGSGIVNSVTRNELALAAATVLTE-------- 188 (287)
T ss_dssp TTCCEEEEEECCBHHHH---SSGGGHH---------HHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTS--------
T ss_pred cCCCeEEEECCEecccc---chhhHHH---------HhhCCce--eccCCCCccCccCHHHHHHHHHHHhcC--------
Confidence 57999999999887632 1222211 1112322 244566788999999999998776521
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
......+||++++ .++|+.++.+.+.+...+
T Consensus 189 -~~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 219 (287)
T 2jl1_A 189 -EGHENKTYNLVSN--QPWTFDELAQILSEVSGK 219 (287)
T ss_dssp -SSCTTEEEEECCS--SCBCHHHHHHHHHHHHSS
T ss_pred -CCCCCcEEEecCC--CcCCHHHHHHHHHHHHCC
Confidence 1123569999886 589999999999886543
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=93.30 E-value=0.075 Score=51.63 Aligned_cols=93 Identities=14% Similarity=0.020 Sum_probs=61.7
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCC--ccccccccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNG--PTGIIAAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g--~~g~~~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
+++++|+||+.+.+ ||..+++.. ...++.....|. .....++++...+.|.||-|+++++.++ .+
T Consensus 204 ~~~~~~~r~~~~~g------p~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~----~~-- 271 (381)
T 1n7h_A 204 GLFACNGILFNHES------PRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLML----QQ-- 271 (381)
T ss_dssp CCEEEEEEECCEEC------TTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHH----TS--
T ss_pred CCcEEEEEeCceeC------CCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHH----hC--
Confidence 68899999988776 333222211 011122222332 2235678888899999999999987765 11
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ .++||.++.+.+.+...
T Consensus 272 -----~~~~~~~i~~~--~~~s~~e~~~~i~~~~g 299 (381)
T 1n7h_A 272 -----EKPDDYVVATE--EGHTVEEFLDVSFGYLG 299 (381)
T ss_dssp -----SSCCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred -----CCCCeEEeeCC--CCCcHHHHHHHHHHHcC
Confidence 12369999987 58999999999988654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=93.27 E-value=0.092 Score=49.97 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=58.9
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHH-HHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVIN-LMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn-~~i~aa~~~~~~~~~~ 86 (422)
+++.+|+||+.|.+. |.-.++ ...++.....|. .++++.+ ..+.+.+|-|++ +++.++ .+
T Consensus 175 ~~~~~~iR~~~v~gp------~~~~~~--~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~----~~---- 235 (330)
T 2pzm_A 175 DVPVVSLRLANVTGP------RLAIGP--IPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQ----EG---- 235 (330)
T ss_dssp SSCEEEEEECEEECT------TCCSSH--HHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTS----TT----
T ss_pred CCCEEEEeeeeeECc------CCCCCH--HHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHh----hc----
Confidence 799999999888873 320011 011111112232 3456666 789999999999 877665 11
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+. ..+||++++ .++|+.++.+.+.+....
T Consensus 236 --~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 264 (330)
T 2pzm_A 236 --RP-TGVFNVSTG--EGHSIKEVFDVVLDYVGA 264 (330)
T ss_dssp --CC-CEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred --CC-CCEEEeCCC--CCCCHHHHHHHHHHHhCC
Confidence 12 579999886 589999999999886554
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=93.18 E-value=0.12 Score=48.16 Aligned_cols=92 Identities=13% Similarity=0.244 Sum_probs=59.5
Q ss_pred CEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCCCC
Q psy16526 10 PVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSNGA 89 (422)
Q Consensus 10 Pi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~~ 89 (422)
+++|+||+.|.+.... +++. .++.....|..-.+.+ +...+.+.+|-++++++.++-+.... .
T Consensus 145 ~~~ilRp~~v~G~~~~---~~~~------~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~------~ 207 (299)
T 1n2s_A 145 KHLIFRTSWVYAGKGN---NFAK------TMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNK------P 207 (299)
T ss_dssp SEEEEEECSEECSSSC---CHHH------HHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHC------G
T ss_pred CeEEEeeeeecCCCcC---cHHH------HHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccc------c
Confidence 8999999999885432 2221 1111112232222344 36789999999999988776433210 0
Q ss_pred CCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 90 QGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 90 ~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 208 ~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 236 (299)
T 1n2s_A 208 EVAGLYHLVAG--GTTTWHDYAALVFDEARK 236 (299)
T ss_dssp GGCEEEECCCB--SCEEHHHHHHHHHHHHHH
T ss_pred ccCceEEEeCC--CCCCHHHHHHHHHHHhCC
Confidence 02469999987 589999999999887654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=93.10 E-value=0.09 Score=49.98 Aligned_cols=88 Identities=18% Similarity=0.196 Sum_probs=59.3
Q ss_pred CCCEEEEccceeeeccC-CCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVN-EPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~-eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+.|.+... .| + ...++.....|....+ ++...+.+.+|-|+++++.++-+.
T Consensus 173 g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~------- 233 (342)
T 2x4g_A 173 GLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERG------- 233 (342)
T ss_dssp TCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHS-------
T ss_pred CCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCC-------
Confidence 79999999999988654 21 1 1122222223322222 466788999999999987776211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ . +|+.++.+.+.+....
T Consensus 234 ---~~g~~~~v~~~--~-~s~~e~~~~i~~~~g~ 261 (342)
T 2x4g_A 234 ---RIGERYLLTGH--N-LEMADLTRRIAELLGQ 261 (342)
T ss_dssp ---CTTCEEEECCE--E-EEHHHHHHHHHHHHTC
T ss_pred ---CCCceEEEcCC--c-ccHHHHHHHHHHHhCC
Confidence 12469999987 3 9999999999887653
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=92.69 E-value=0.085 Score=50.88 Aligned_cols=95 Identities=15% Similarity=0.041 Sum_probs=62.0
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcccccccccccee-eEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFF-RTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~l-r~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++++|+||+-+.+....+ ++..++ ...++.....|.. ....++++...|.|.||-|+++++.++ .+
T Consensus 175 ~~~~~~~r~~~~~gp~~~~--~~~~~~--~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~----~~---- 242 (372)
T 1db3_A 175 GMYACNGILFNHESPRRGE--TFVTRK--ITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML----QQ---- 242 (372)
T ss_dssp CCCEEEEEECCEECTTSCT--TSHHHH--HHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT----SS----
T ss_pred CCCeEEEEECCccCCCCCC--cchhhH--HHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHH----hc----
Confidence 6899999998876643221 111100 1112222223432 235688899999999999999987665 11
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ .++|+.++.+.+.+...
T Consensus 243 ---~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 270 (372)
T 1db3_A 243 ---EQPEDFVIATG--VQYSVRQFVEMAAAQLG 270 (372)
T ss_dssp ---SSCCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred ---CCCceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 12368999886 68999999999988654
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=92.56 E-value=0.14 Score=48.61 Aligned_cols=94 Identities=15% Similarity=-0.037 Sum_probs=62.9
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCc--cccccccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGP--TGIIAAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~--~g~~~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
++++.+.||+.+.+ ||+.++.... ..++.....|. ...+.++.+...|.+.+|-|+++++.++ .+
T Consensus 170 ~~~~~~~r~~~~~g------pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~----~~-- 237 (345)
T 2z1m_A 170 NMFACSGILFNHES------PLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMM----QQ-- 237 (345)
T ss_dssp CCCEEEEEECCEEC------TTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHH----TS--
T ss_pred CCceEeeeeeeecC------CCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHH----hC--
Confidence 58899999988776 5655443210 11111112332 2335677788889999999999987765 11
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+....
T Consensus 238 -----~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 266 (345)
T 2z1m_A 238 -----PEPDDYVIATG--ETHTVREFVEKAAKIAGF 266 (345)
T ss_dssp -----SSCCCEEECCS--CCEEHHHHHHHHHHHTTC
T ss_pred -----CCCceEEEeCC--CCccHHHHHHHHHHHhCC
Confidence 12368999886 589999999999887653
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=92.56 E-value=0.19 Score=46.32 Aligned_cols=88 Identities=8% Similarity=-0.023 Sum_probs=59.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.+.+.. .+++.. ....|.+. .++++...+.+.+|-|+++++.++-+.
T Consensus 128 ~~~~~~ilrp~~~~~~~----~~~~~~---------~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~------- 185 (286)
T 2zcu_A 128 SGIVYTLLRNGWYSENY----LASAPA---------ALEHGVFI--GAAGDGKIASATRADYAAAAARVISEA------- 185 (286)
T ss_dssp HCSEEEEEEECCBHHHH----HTTHHH---------HHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHHSS-------
T ss_pred cCCCeEEEeChHHhhhh----HHHhHH---------hhcCCcee--ccCCCCccccccHHHHHHHHHHHhcCC-------
Confidence 47999999999877632 222211 11123332 456678889999999999987765221
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ .++|+.++.+...+...+
T Consensus 186 --~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 215 (286)
T 2zcu_A 186 --GHEGKVYELAGD--SAWTLTQLAAELTKQSGK 215 (286)
T ss_dssp --SCTTCEEEECCS--SCBCHHHHHHHHHHHHSS
T ss_pred --CCCCceEEEeCC--CcCCHHHHHHHHHHHHCC
Confidence 123469999876 589999999999886543
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=92.34 E-value=0.06 Score=50.08 Aligned_cols=87 Identities=9% Similarity=0.062 Sum_probs=59.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.+.+ |+.+|+..+.. .|. .....++...+.|.+|-|+++++.++-+..
T Consensus 131 ~g~~~~ilrp~~~~~----~~~~~~~~~~~---------~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~------ 189 (289)
T 3e48_A 131 SGIDYTYVRMAMYMD----PLKPYLPELMN---------MHK--LIYPAGDGRINYITRNDIARGVIAIIKNPD------ 189 (289)
T ss_dssp HCCEEEEEEECEEST----THHHHHHHHHH---------HTE--ECCCCTTCEEEEECHHHHHHHHHHHHHCGG------
T ss_pred cCCCEEEEecccccc----ccHHHHHHHHH---------CCC--EecCCCCceeeeEEHHHHHHHHHHHHcCCC------
Confidence 479999999998865 34444332211 121 223456778899999999998877663221
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++ + .++|+.|+.+.+.+...+
T Consensus 190 ---~~g~~~~~~-~--~~~s~~e~~~~~~~~~g~ 217 (289)
T 3e48_A 190 ---TWGKRYLLS-G--YSYDMKELAAILSEASGT 217 (289)
T ss_dssp ---GTTCEEEEC-C--EEEEHHHHHHHHHHHHTS
T ss_pred ---cCCceEEeC-C--CcCCHHHHHHHHHHHHCC
Confidence 114699999 5 689999999999887554
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=92.13 E-value=0.13 Score=62.40 Aligned_cols=96 Identities=15% Similarity=0.129 Sum_probs=62.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++.+|++|++ +.+.+ ...+|+|||+||..... +.++..+++|+.|+.++.++++..
T Consensus 1937 ~~v~~~~~Dvsd~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~ 2010 (2512)
T 2vz8_A 1937 VQVLVSTSNASSLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREAC 2010 (2512)
T ss_dssp CEEEEECCCSSSHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHC
T ss_pred CEEEEEecCCCCHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46788999999873 22222 23689999999975311 233455889999999998887653
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
....+||.+||..+.-. .| ....|+.+|..-+.+.+
T Consensus 2011 ~~~g~iV~iSS~ag~~g----------~~--g~~~Y~aaKaal~~l~~ 2046 (2512)
T 2vz8_A 2011 PELDYFVIFSSVSCGRG----------NA--GQANYGFANSAMERICE 2046 (2512)
T ss_dssp TTCCEEEEECCHHHHTT----------CT--TCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEecchhhcCC----------CC--CcHHHHHHHHHHHHHHH
Confidence 22468999999755311 11 23578888887777665
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=91.79 E-value=0.21 Score=46.81 Aligned_cols=93 Identities=22% Similarity=0.133 Sum_probs=61.3
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCcc-ccccccccceeeEEe-----ecCCcccccchhHHHHHHHHHHHHHHhh
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPT-GIIAAAGKGFFRTML-----CHENKVADLVPVDIVINLMICAAWKTAV 81 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~-g~~~~~g~G~lr~~~-----~~~~~~~DiVPvD~vvn~~i~aa~~~~~ 81 (422)
+++++|+||+.|.+....+.. ..+.. .++-..-.|..-.++ ++++...|.+-||=|+++++.++-
T Consensus 162 ~~~~~~lrp~~v~Gp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~---- 232 (311)
T 2p5y_A 162 GLKWVSLRYGNVYGPRQDPHG-----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALF---- 232 (311)
T ss_dssp CCCEEEEEECEEECTTCCSSS-----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHH----
T ss_pred CCCEEEEeeccccCcCCCCCC-----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHh----
Confidence 699999999999885433210 00110 111111123222344 777778899999999999877652
Q ss_pred hhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 82 KYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 82 ~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
. . ..+||++++ .++|+.++.+.+.+...
T Consensus 233 ~-----~---~~~~~i~~~--~~~s~~e~~~~i~~~~g 260 (311)
T 2p5y_A 233 S-----L---EGIYNVGTG--EGHTTREVLMAVAEAAG 260 (311)
T ss_dssp H-----C---CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred C-----C---CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 1 1 359999986 58999999999988664
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=91.09 E-value=0.39 Score=50.11 Aligned_cols=97 Identities=13% Similarity=0.119 Sum_probs=60.8
Q ss_pred cEEEEeCcC-CCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc---C
Q psy16526 306 KIKPILGDI-TEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM---T 371 (422)
Q Consensus 306 ~v~~v~gDl-~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 371 (422)
++..+.+|+ ++.+ .-.+.+ ..++|++||+||.... .+.++..+++|+.|+.++.+++... .
T Consensus 370 ~~~~~~~Dv~~~~~-----~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~ 444 (604)
T 2et6_A 370 EAWPDQHDVAKDSE-----AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK 444 (604)
T ss_dssp EEEEECCCHHHHHH-----HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcChHHHHH-----HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 466677888 4431 112222 3478999999997531 1345667999999999998887531 1
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+-.++|++||..+... .| ....|+.+|..-+.+.+.
T Consensus 445 ~~G~IVnisS~ag~~~----------~~--~~~~Y~asKaal~~lt~~ 480 (604)
T 2et6_A 445 QFGRIINITSTSGIYG----------NF--GQANYSSSKAGILGLSKT 480 (604)
T ss_dssp TCEEEEEECCHHHHSC----------CT--TBHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECChhhccC----------CC--CChhHHHHHHHHHHHHHH
Confidence 1368999999754311 11 234677777665555443
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=90.35 E-value=0.2 Score=46.87 Aligned_cols=95 Identities=13% Similarity=-0.013 Sum_probs=59.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.+.+..- .++....+. .....|.+ .++++++...+.|.+|-++++++.+.-+..
T Consensus 148 ~g~~~~ilrp~~~~~~~~-------~~~~~~~~~-~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~------ 212 (313)
T 1qyd_A 148 ASIPYTYVSSNMFAGYFA-------GSLAQLDGH-MMPPRDKV-LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ------ 212 (313)
T ss_dssp TTCCBCEEECCEEHHHHT-------TTSSCTTCC-SSCCSSEE-CCBTTSCSEEEEECHHHHHHHHHHHTTCGG------
T ss_pred cCCCeEEEEeceeccccc-------ccccccccc-ccCCCCeE-EEeCCCCceEEEEEHHHHHHHHHHHHhCcc------
Confidence 469999999999987432 121111100 11112222 356778888999999999998776652211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+|+++.+ .+++|+.++.+...+...+
T Consensus 213 ---~~~~~~~~~g~-~~~~s~~e~~~~~~~~~g~ 242 (313)
T 1qyd_A 213 ---TLNKTMYIRPP-MNILSQKEVIQIWERLSEQ 242 (313)
T ss_dssp ---GSSSEEECCCG-GGEEEHHHHHHHHHHHHTC
T ss_pred ---cCCceEEEeCC-CCccCHHHHHHHHHHhcCC
Confidence 11346665542 2579999999999886653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=90.28 E-value=0.32 Score=44.37 Aligned_cols=84 Identities=11% Similarity=-0.006 Sum_probs=55.5
Q ss_pred CCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCCC
Q psy16526 9 LPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSNG 88 (422)
Q Consensus 9 lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~ 88 (422)
++..|+||+.|.+ ..++..|+ +.....|....+.++ ..+.+.+|-|+++++.++-. .
T Consensus 144 ~~~~~iR~~~v~G--~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~---~------ 200 (273)
T 2ggs_A 144 DDSLIIRTSGIFR--NKGFPIYV---------YKTLKEGKTVFAFKG---YYSPISARKLASAILELLEL---R------ 200 (273)
T ss_dssp TTCEEEEECCCBS--SSSHHHHH---------HHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHH---T------
T ss_pred CCeEEEecccccc--ccHHHHHH---------HHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhc---C------
Confidence 7889999999986 23333222 111122322223333 67899999999998877622 1
Q ss_pred CCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 89 AQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 89 ~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
...+||+++ .++|+.++.+.+.+....
T Consensus 201 --~~g~~~i~~---~~~s~~e~~~~~~~~~g~ 227 (273)
T 2ggs_A 201 --KTGIIHVAG---ERISRFELALKIKEKFNL 227 (273)
T ss_dssp --CCEEEECCC---CCEEHHHHHHHHHHHTTC
T ss_pred --cCCeEEECC---CcccHHHHHHHHHHHhCC
Confidence 124999976 689999999999887653
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=89.78 E-value=0.27 Score=46.65 Aligned_cols=99 Identities=10% Similarity=-0.043 Sum_probs=61.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCC--ccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNG--PTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g--~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
.+++..++||+.|.+. ||+.++... ...++.....|....++++++...+++.||-|+++++.++-.....
T Consensus 183 ~~~~~~~ir~~~v~g~-----pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~-- 255 (342)
T 2hrz_A 183 GFFDGIGIRLPTICIR-----PGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEK-- 255 (342)
T ss_dssp TSCEEEEEEECEETTC-----CSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHH--
T ss_pred cCCCceeEEeeeEEec-----CCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccc--
Confidence 3689999999888751 454432211 1112222223443445666677788999999999987776322110
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
.....+||++ + .++|+.++.+.+.+...
T Consensus 256 ----~~~~~~~ni~-g--~~~s~~e~~~~i~~~~g 283 (342)
T 2hrz_A 256 ----VGPRRNLSMP-G--LSATVGEQIEALRKVAG 283 (342)
T ss_dssp ----HCSCCEEECC-C--EEEEHHHHHHHHHHHHC
T ss_pred ----cCCccEEEcC-C--CCCCHHHHHHHHHHHcC
Confidence 0124599994 4 47999999999887654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=89.68 E-value=0.47 Score=43.88 Aligned_cols=87 Identities=13% Similarity=0.152 Sum_probs=57.4
Q ss_pred CCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCCC
Q psy16526 9 LPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSNG 88 (422)
Q Consensus 9 lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~~ 88 (422)
.+.+|+||+.|.+. .. +++.. ++.....|..-.+.+ +...+.+.+|-|+++++.++-..
T Consensus 153 ~~~~~lR~~~v~G~-~~---~~~~~------~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--------- 211 (292)
T 1vl0_A 153 PKYYIVRTAWLYGD-GN---NFVKT------MINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--------- 211 (292)
T ss_dssp SSEEEEEECSEESS-SS---CHHHH------HHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT---------
T ss_pred CCeEEEeeeeeeCC-Cc---ChHHH------HHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC---------
Confidence 47999999999875 22 22211 111111232222333 46789999999999987766321
Q ss_pred CCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 89 AQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 89 ~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
...+||++++ .++|+.++.+.+.+....
T Consensus 212 --~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 239 (292)
T 1vl0_A 212 --NYGTFHCTCK--GICSWYDFAVEIFRLTGI 239 (292)
T ss_dssp --CCEEEECCCB--SCEEHHHHHHHHHHHHCC
T ss_pred --CCcEEEecCC--CCccHHHHHHHHHHHhCC
Confidence 2469999887 689999999999887653
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=89.35 E-value=0.76 Score=45.26 Aligned_cols=100 Identities=13% Similarity=-0.037 Sum_probs=58.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEccccc----------------Ch----------------
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATV----------------KF---------------- 345 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~----------------~~---------------- 345 (422)
.++..+.+|++|++ +.+.+ ..++|+++|.||.. .+
T Consensus 109 ~~a~~i~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~ 182 (405)
T 3zu3_A 109 LYAKSINGDAFSDE------IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVI 182 (405)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccc
Confidence 45778999999874 22322 24689999999863 11
Q ss_pred ---------hhhHHHHHHhhHHHHH-HHHHHHHhcC---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhC
Q psy16526 346 ---------DEALKLSVTINMLGTK-RLVELCHEMT---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWM 412 (422)
Q Consensus 346 ---------~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~ 412 (422)
.+.++..+++|..|+. .+++++.... +-.++|.+||..+.- +.|....+.|+.+|..
T Consensus 183 ~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~----------~~p~~~~~aY~AaKaa 252 (405)
T 3zu3_A 183 KESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI----------THDIYWNGSIGAAKKD 252 (405)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG----------GTTTTTTSHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC----------cCCCccchHHHHHHHH
Confidence 1234556778887775 5555543211 014799999875421 1122112567777776
Q ss_pred CHHHhhhc
Q psy16526 413 DDSLVNTL 420 (422)
Q Consensus 413 ~E~~~~~~ 420 (422)
-+.+.+.+
T Consensus 253 l~~ltrsL 260 (405)
T 3zu3_A 253 LDQKVLAI 260 (405)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=89.33 E-value=0.52 Score=49.12 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=50.6
Q ss_pred cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cCCCceEEEEeCCccccCCCcccccccCCC
Q psy16526 331 QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MTHLEALIHVSTAYCNCDREEVREIIYSPP 399 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p 399 (422)
.++|++||+||.... .+.++..+++|+.|+..+.+++.. .+ -.++|++||..+.-. .|
T Consensus 90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~----------~~ 158 (604)
T 2et6_A 90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYG----------NF 158 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC----------CT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC----------CC
Confidence 478999999997531 134566799999999999888753 22 358999999754311 11
Q ss_pred CCHHHHHHHHhhCCHHHhhh
Q psy16526 400 YDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 400 ~~p~~~y~~~K~~~E~~~~~ 419 (422)
....|+.+|..-+.+.+.
T Consensus 159 --~~~~Y~asKaal~~lt~~ 176 (604)
T 2et6_A 159 --GQANYASAKSALLGFAET 176 (604)
T ss_dssp --TBHHHHHHHHHHHHHHHH
T ss_pred --CchHHHHHHHHHHHHHHH
Confidence 134567777655554443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=89.19 E-value=0.47 Score=37.10 Aligned_cols=54 Identities=7% Similarity=-0.063 Sum_probs=38.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
.++.++.+|++++ +++.+++.++|+|||+++.. .+.+++++|.+.+ ++++...+
T Consensus 48 ~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~g-~~~~~~~~ 101 (118)
T 3ic5_A 48 MGVATKQVDAKDE------AGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAAG-AHYFDLTE 101 (118)
T ss_dssp TTCEEEECCTTCH------HHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHTT-CEEECCCS
T ss_pred CCCcEEEecCCCH------HHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHhC-CCEEEecC
Confidence 4567888999875 45677788999999998531 1467888888876 66555433
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=89.10 E-value=0.39 Score=43.09 Aligned_cols=84 Identities=14% Similarity=0.143 Sum_probs=53.0
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+... ++. .++.+....+ ++ ...+.+.+|-|+++++.++.+..
T Consensus 165 ~~i~~~~vrpg~v~~~~~----~~~-------~~~~~~~~~~----~~---~~~~~~~~~Dva~~~~~~~~~~~------ 220 (253)
T 1xq6_A 165 SGTPYTIIRAGGLLDKEG----GVR-------ELLVGKDDEL----LQ---TDTKTVPRADVAEVCIQALLFEE------ 220 (253)
T ss_dssp SSSCEEEEEECEEECSCS----SSS-------CEEEESTTGG----GG---SSCCEEEHHHHHHHHHHHTTCGG------
T ss_pred CCCceEEEecceeecCCc----chh-------hhhccCCcCC----cC---CCCcEEcHHHHHHHHHHHHcCcc------
Confidence 579999999999876432 111 1111111111 11 12357899999998877662211
Q ss_pred CCCCCceEEEccCCCC-CCccHhhHHHHHHHH
Q psy16526 87 NGAQGITVYNCCTGQR-NPISWKQFVNYSFES 117 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~-np~t~~~~~~~~~~~ 117 (422)
....+||++++.. .++|+.|+.+.+.+.
T Consensus 221 ---~~g~~~~i~~~~~~~~~s~~e~~~~~~~~ 249 (253)
T 1xq6_A 221 ---AKNKAFDLGSKPEGTSTPTKDFKALFSQV 249 (253)
T ss_dssp ---GTTEEEEEEECCTTTSCCCCCHHHHHHTC
T ss_pred ---ccCCEEEecCCCcCCCCCHHHHHHHHHHH
Confidence 1346999998763 689999999988764
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=89.08 E-value=0.95 Score=44.88 Aligned_cols=104 Identities=11% Similarity=-0.077 Sum_probs=57.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEccccc-------------C---h--------------------
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATV-------------K---F-------------------- 345 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~-------------~---~-------------------- 345 (422)
.++..+.+|+++++-. ++-++.+ ..++|++||+||.. . +
T Consensus 123 ~~~~~~~~Dvtd~~~v--~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~ 200 (418)
T 4eue_A 123 LVAKNFIEDAFSNETK--DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKK 200 (418)
T ss_dssp CCEEEEESCTTCHHHH--HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEeeCCCHHHH--HHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccccccc
Confidence 4678899999997311 0111222 23689999999863 0 1
Q ss_pred -----hhhHHHHHHhhHHHHH-HHHHHHHhcC---CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHH
Q psy16526 346 -----DEALKLSVTINMLGTK-RLVELCHEMT---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSL 416 (422)
Q Consensus 346 -----~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~ 416 (422)
.+..+..+++|..+.. .+++++.... +-.++|.+||..+.- +.|....+.|+.+|..-+.+
T Consensus 201 ~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~----------~~p~~~~~aY~ASKaAL~~l 270 (418)
T 4eue_A 201 VSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR----------TYKIYREGTIGIAKKDLEDK 270 (418)
T ss_dssp ECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG----------GTTTTTTSHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC----------CCCccccHHHHHHHHHHHHH
Confidence 1223344566665554 5555554322 114688888864321 12221126777787766666
Q ss_pred hhhc
Q psy16526 417 VNTL 420 (422)
Q Consensus 417 ~~~~ 420 (422)
.+.+
T Consensus 271 trsL 274 (418)
T 4eue_A 271 AKLI 274 (418)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=88.30 E-value=0.94 Score=40.00 Aligned_cols=75 Identities=9% Similarity=-0.048 Sum_probs=44.8
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
..+++++|+||+.|.+.... ++... .+.+ .....++ ..+.|.+|-|+++++.++-+
T Consensus 152 ~~~~~~~ilrp~~v~g~~~~--~~~~~-----------~~~~-~~~~~~~---~~~~i~~~Dva~ai~~~l~~------- 207 (227)
T 3dhn_A 152 EKEIDWVFFSPAADMRPGVR--TGRYR-----------LGKD-DMIVDIV---GNSHISVEDYAAAMIDELEH------- 207 (227)
T ss_dssp CCSSEEEEEECCSEEESCCC--CCCCE-----------EESS-BCCCCTT---SCCEEEHHHHHHHHHHHHHS-------
T ss_pred ccCccEEEEeCCcccCCCcc--cccee-----------ecCC-CcccCCC---CCcEEeHHHHHHHHHHHHhC-------
Confidence 45799999999999874322 11110 0111 1111122 26899999999998877621
Q ss_pred CCCCCCceEEEccCCCCCCccHh
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWK 108 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~ 108 (422)
......+||++++ .|.+|+
T Consensus 208 --~~~~g~~~~~~~~--~~~~~~ 226 (227)
T 3dhn_A 208 --PKHHQERFTIGYL--EHHHHH 226 (227)
T ss_dssp --CCCCSEEEEEECC--SCCC--
T ss_pred --ccccCcEEEEEee--hhcccC
Confidence 1224679999997 466665
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=86.92 E-value=0.34 Score=42.44 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=41.5
Q ss_pred CCC-EEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLP-VAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lP-i~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
+++ ++|+||+.|.+.... +.|++.+.+ .... + .+ ...+.+.+|-|+++++.++ .+
T Consensus 140 ~~~~~~~vrp~~v~g~~~~--~~~~~~~~~----------~~~~-~-~~--~~~~~i~~~Dva~~~~~~~----~~---- 195 (215)
T 2a35_A 140 GWPQLTIARPSLLFGPREE--FRLAEILAA----------PIAR-I-LP--GKYHGIEACDLARALWRLA----LE---- 195 (215)
T ss_dssp CCSEEEEEECCSEESTTSC--EEGGGGTTC----------CCC--------CHHHHHHHHHHHHHHHHHH----TC----
T ss_pred CCCeEEEEeCceeeCCCCc--chHHHHHHH----------hhhh-c-cC--CCcCcEeHHHHHHHHHHHH----hc----
Confidence 689 999999999875543 234443321 1111 1 11 2568899999999887765 21
Q ss_pred CCCCCceEEEccCC
Q psy16526 87 NGAQGITVYNCCTG 100 (422)
Q Consensus 87 ~~~~~~~vy~~~ss 100 (422)
+...+||++++
T Consensus 196 ---~~~~~~~i~~~ 206 (215)
T 2a35_A 196 ---EGKGVRFVESD 206 (215)
T ss_dssp ---CCSEEEEEEHH
T ss_pred ---CCCCceEEcHH
Confidence 12569999875
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=86.38 E-value=1.4 Score=43.68 Aligned_cols=104 Identities=13% Similarity=-0.030 Sum_probs=57.8
Q ss_pred CcEEEEeCcCCCCCCCCC-HHHHHHHh-cCccEEEEccccc----------------Ch---------------------
Q psy16526 305 AKIKPILGDITEPELGIS-QNDQKILK-QNVSVVFHSAATV----------------KF--------------------- 345 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~-~~~~~~~~-~~~d~ViH~Aa~~----------------~~--------------------- 345 (422)
.++..+.+|+++++..-. -+...+.. .++|++||.||.. .+
T Consensus 123 ~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~ 202 (422)
T 3s8m_A 123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASI 202 (422)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcccccccccccccccccccccccccccccccccccccccccc
Confidence 357789999999741100 00111223 4689999999862 11
Q ss_pred ----hhhHHHHHHhhHHHHH-HHHHHHHhcC---CCceEEEEeCCccccCCCcccccccCCCCCHH--HHHHHHhhCCHH
Q psy16526 346 ----DEALKLSVTINMLGTK-RLVELCHEMT---HLEALIHVSTAYCNCDREEVREIIYSPPYDPQ--KIIETMEWMDDS 415 (422)
Q Consensus 346 ----~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~--~~y~~~K~~~E~ 415 (422)
.+.++..+++|..|+. .+++++.... +-.++|.+||..+.- +...+ +.|+.+|..-+.
T Consensus 203 ~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~------------~~p~~~~~aY~ASKaAl~~ 270 (422)
T 3s8m_A 203 EPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI------------TWPIYWHGALGKAKVDLDR 270 (422)
T ss_dssp CCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG------------GHHHHTSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc------------cCCCccchHHHHHHHHHHH
Confidence 1233444566666554 5566554321 014799999875421 11124 678888887666
Q ss_pred Hhhhc
Q psy16526 416 LVNTL 420 (422)
Q Consensus 416 ~~~~~ 420 (422)
+.+.+
T Consensus 271 lTrsL 275 (422)
T 3s8m_A 271 TAQRL 275 (422)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=85.33 E-value=1.2 Score=41.23 Aligned_cols=94 Identities=10% Similarity=-0.020 Sum_probs=58.4
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|++|+||+.+.+... |++.. . +.. ....+.+ .++++++...+.+.+|-|+++++.+.-+..
T Consensus 143 ~~i~~~~lrp~~~~~~~~---~~~~~----~-~~~-~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~------ 206 (307)
T 2gas_A 143 EGVPYTYLCCHAFTGYFL---RNLAQ----L-DAT-DPPRDKV-VILGDGNVKGAYVTEADVGTFTIRAANDPN------ 206 (307)
T ss_dssp HTCCBEEEECCEETTTTG---GGTTC----T-TCS-SCCSSEE-EEETTSCSEEEEECHHHHHHHHHHHHTCGG------
T ss_pred cCCCeEEEEcceeecccc---ccccc----c-ccc-cCCCCeE-EEecCCCcceEEeeHHHHHHHHHHHHcCcc------
Confidence 369999999999876321 22111 0 000 0112222 356778888999999999998776652211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+|+++.+ .+++|+.|+.+.+.+...+
T Consensus 207 ---~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~ 236 (307)
T 2gas_A 207 ---TLNKAVHIRLP-KNYLTQNEVIALWEKKIGK 236 (307)
T ss_dssp ---GTTEEEECCCG-GGEEEHHHHHHHHHHHHTS
T ss_pred ---ccCceEEEeCC-CCcCCHHHHHHHHHHHhCC
Confidence 12346665532 2679999999999886553
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=84.40 E-value=0.81 Score=42.78 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=51.7
Q ss_pred CCCCEEEEccceeeeccCCC-ccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEP-VAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP-~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.+++++|+||+.|.+....+ +++++..+ ...+ .|... .+ .+ ...|++.||-|+++++.++-+ .
T Consensus 178 ~gi~~~~lrp~~v~g~~~~~~~~~~~~~~---~~~~--~g~~~--~~-~~--~~~~~i~v~Dva~a~~~~~~~---~--- 241 (322)
T 2p4h_X 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKA---LVLV--LGKKE--QI-GV--TRFHMVHVDDVARAHIYLLEN---S--- 241 (322)
T ss_dssp TTCCEEEEEECEEESCCCSSSCCHHHHHH---THHH--HSCGG--GC-CE--EEEEEEEHHHHHHHHHHHHHS---C---
T ss_pred cCCcEEEEcCCceECCCCCCCCCchHHHH---HHHH--hCCCc--cC-cC--CCcCEEEHHHHHHHHHHHhhC---c---
Confidence 47999999999998865432 22221100 0001 11111 11 11 223899999999998876621 1
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
.....|| +++ .++|+.++.+.+.+..
T Consensus 242 ----~~~g~~~-~~~--~~~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 242 ----VPGGRYN-CSP--FIVPIEEMSQLLSAKY 267 (322)
T ss_dssp ----CCCEEEE-CCC--EEEEHHHHHHHHHHHC
T ss_pred ----CCCCCEE-EcC--CCCCHHHHHHHHHHhC
Confidence 1123588 444 5799999999887643
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=84.23 E-value=0.62 Score=44.63 Aligned_cols=87 Identities=8% Similarity=0.014 Sum_probs=56.7
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.+.....+|.+++.+ ..|.......+++..-+.+.+|-++++++.++-. .
T Consensus 173 ~g~~~~~vRpg~v~g~~~~~i~~~~~~~----------~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~-~------ 235 (344)
T 2gn4_A 173 SQTQFSVVRYGNVVGSRGSVVPFFKKLV----------QNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR-M------ 235 (344)
T ss_dssp SCCEEEEECCCEETTCTTSHHHHHHHHH----------HHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH-C------
T ss_pred CCcEEEEEEeccEECCCCCHHHHHHHHH----------HcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh-c------
Confidence 5699999999999986544344433321 1222001123566677889999999998877632 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHH
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFE 116 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~ 116 (422)
....+||.++. ++|+.++.+.+.+
T Consensus 236 ---~~g~~~~~~~~---~~s~~el~~~i~~ 259 (344)
T 2gn4_A 236 ---HGGEIFVPKIP---SMKMTDLAKALAP 259 (344)
T ss_dssp ---CSSCEEEECCC---EEEHHHHHHHHCT
T ss_pred ---cCCCEEecCCC---cEEHHHHHHHHHH
Confidence 13458997653 5899999888764
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=84.21 E-value=0.73 Score=42.82 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=58.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|.+|+||+.+.+.... ++... +... ...+. -.++++++...+.+.+|-++++++.+.-+..
T Consensus 144 ~~~~~~~~r~~~~~~~~~~-------~~~~~-~~~~-~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~------ 207 (308)
T 1qyc_A 144 EGIPYTYVSSNCFAGYFLR-------SLAQA-GLTA-PPRDK-VVILGDGNARVVFVKEEDIGTFTIKAVDDPR------ 207 (308)
T ss_dssp HTCCBEEEECCEEHHHHTT-------TTTCT-TCSS-CCSSE-EEEETTSCCEEEEECHHHHHHHHHTTSSCGG------
T ss_pred cCCCeEEEEeceecccccc-------ccccc-cccC-CCCCc-eEEecCCCceEEEecHHHHHHHHHHHHhCcc------
Confidence 3699999999998764321 11110 1011 11222 2467788889999999999998766542111
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+|+++.+ .+++|+.|+.+...+...
T Consensus 208 ---~~~~~~~~~g~-~~~~s~~e~~~~~~~~~g 236 (308)
T 1qyc_A 208 ---TLNKTLYLRLP-ANTLSLNELVALWEKKID 236 (308)
T ss_dssp ---GTTEEEECCCG-GGEEEHHHHHHHHHHHTT
T ss_pred ---ccCeEEEEeCC-CCccCHHHHHHHHHHHhC
Confidence 12356776542 268999999999988654
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=83.93 E-value=1.3 Score=39.08 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=48.0
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
..+++++|+||+.|.+... .|. +. . ++...+.+.+|-|+++++.++-+..
T Consensus 140 ~~~i~~~ilrp~~v~g~~~---~~~------------------~~--~--~~~~~~~i~~~Dva~~i~~~l~~~~----- 189 (219)
T 3dqp_A 140 ETNLDYTIIQPGALTEEEA---TGL------------------ID--I--NDEVSASNTIGDVADTIKELVMTDH----- 189 (219)
T ss_dssp SCCCEEEEEEECSEECSCC---CSE------------------EE--E--SSSCCCCEEHHHHHHHHHHHHTCGG-----
T ss_pred ccCCcEEEEeCceEecCCC---CCc------------------cc--c--CCCcCCcccHHHHHHHHHHHHhCcc-----
Confidence 4679999999999976421 111 11 1 2677899999999999887763211
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHH
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVN 112 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~ 112 (422)
....+||++++ +.++.|+.+
T Consensus 190 ----~~g~~~~i~~g---~~~~~e~~~ 209 (219)
T 3dqp_A 190 ----SIGKVISMHNG---KTAIKEALE 209 (219)
T ss_dssp ----GTTEEEEEEEC---SEEHHHHHH
T ss_pred ----ccCcEEEeCCC---CccHHHHHH
Confidence 13569999887 467776644
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=83.73 E-value=0.88 Score=40.61 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=50.8
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
..++++.|+||+.|.+... .|.+.. ..+.+...+.+.+|-|+++++.++-+..
T Consensus 160 ~~gi~~~~lrpg~v~~~~~---------------------~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~----- 212 (236)
T 3e8x_A 160 RSSLDYTIVRPGPLSNEES---------------------TGKVTV-SPHFSEITRSITRHDVAKVIAELVDQQH----- 212 (236)
T ss_dssp HSSSEEEEEEECSEECSCC---------------------CSEEEE-ESSCSCCCCCEEHHHHHHHHHHHTTCGG-----
T ss_pred HCCCCEEEEeCCcccCCCC---------------------CCeEEe-ccCCCcccCcEeHHHHHHHHHHHhcCcc-----
Confidence 3579999999999877421 111111 2234446789999999999877762211
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHH
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYS 114 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~ 114 (422)
....+||++++ +.+|.++.+..
T Consensus 213 ----~~g~~~~v~~~---~~~~~e~~~~i 234 (236)
T 3e8x_A 213 ----TIGKTFEVLNG---DTPIAKVVEQL 234 (236)
T ss_dssp ----GTTEEEEEEEC---SEEHHHHHHTC
T ss_pred ----ccCCeEEEeCC---CcCHHHHHHHh
Confidence 23579999886 58999987653
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=82.59 E-value=0.84 Score=43.85 Aligned_cols=54 Identities=13% Similarity=0.002 Sum_probs=40.4
Q ss_pred HHHhcCccEEEEcccccCh-hhhHHHHHHhhHHHHHHHHHHHHhcCCCc--eEEEEeC
Q psy16526 327 KILKQNVSVVFHSAATVKF-DEALKLSVTINMLGTKRLVELCHEMTHLE--ALIHVST 381 (422)
Q Consensus 327 ~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~--r~v~~SS 381 (422)
.+.++++|+|||+||..+- ..+..+.++.|+..++++++++++.+ .+ +++.+|-
T Consensus 74 ~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvsN 130 (333)
T 5mdh_A 74 EIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA-KKSVKVIVVGN 130 (333)
T ss_dssp HHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECSS
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCC
Confidence 4557899999999987643 23444568899999999999999876 33 4666654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=81.42 E-value=1.1 Score=42.05 Aligned_cols=94 Identities=11% Similarity=-0.028 Sum_probs=59.5
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++.+|+||+++.+... .++...... ....|.+ .++++++...+.+.+|-|+++++.+.-+..
T Consensus 144 ~~~~~~~lrp~~~~~~~~-------~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~------ 207 (321)
T 3c1o_A 144 AALPYTYVSANCFGAYFV-------NYLLHPSPH--PNRNDDI-VIYGTGETKFVLNYEEDIAKYTIKVACDPR------ 207 (321)
T ss_dssp HTCCBEEEECCEEHHHHH-------HHHHCCCSS--CCTTSCE-EEETTSCCEEEEECHHHHHHHHHHHHHCGG------
T ss_pred cCCCeEEEEeceeccccc-------ccccccccc--ccccCce-EEecCCCcceeEeeHHHHHHHHHHHHhCcc------
Confidence 369999999999877431 111110000 0112222 356778888999999999998877663211
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+|+++.+ ..++|+.++.+.+.+...+
T Consensus 208 ---~~g~~~~~~g~-~~~~t~~e~~~~~~~~~g~ 237 (321)
T 3c1o_A 208 ---CCNRIVIYRPP-KNIISQNELISLWEAKSGL 237 (321)
T ss_dssp ---GTTEEEECCCG-GGEEEHHHHHHHHHHHHTS
T ss_pred ---ccCeEEEEeCC-CCcccHHHHHHHHHHHcCC
Confidence 12356776542 2589999999999887653
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=81.27 E-value=0.57 Score=44.17 Aligned_cols=97 Identities=11% Similarity=0.053 Sum_probs=55.5
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++++.|+||+.|.+....|.... +....++.....|....+.++. ...|.+.||-|+++++.++-..
T Consensus 196 ~~~~~~~~rp~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~------- 263 (342)
T 1y1p_A 196 PHFTLNAVLPNYTIGTIFDPETQS----GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLP------- 263 (342)
T ss_dssp CSSEEEEEEESEEECCCSCTTTCC----CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCT-------
T ss_pred CCceEEEEcCCceECCCCCCCCCC----ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCc-------
Confidence 478999999999988765543210 0111111111122111122332 4558899999999987776321
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
. .....| ++++ .++||.++.+.+.+....
T Consensus 264 -~-~~g~~~-~~~g--~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 264 -Q-IERRRV-YGTA--GTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp -T-CCSCEE-EECC--EEECHHHHHHHHHHHCTT
T ss_pred -c-cCCceE-EEeC--CCCCHHHHHHHHHHHCCC
Confidence 1 112223 3344 579999999999887543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=81.23 E-value=2.6 Score=38.85 Aligned_cols=91 Identities=11% Similarity=-0.014 Sum_probs=56.3
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCcccccccccccee-eEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFF-RTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~l-r~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.+.+.... +|+... . ..|.. ......++...+.|.+|-++++++.+.-+....
T Consensus 144 ~gi~~~ilrp~~~~~~~~~---~~~~~~-------~--~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~--- 208 (299)
T 2wm3_A 144 IGVPMTSVRLPCYFENLLS---HFLPQK-------A--PDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKY--- 208 (299)
T ss_dssp HTCCEEEEECCEEGGGGGT---TTCCEE-------C--TTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHH---
T ss_pred CCCCEEEEeecHHhhhchh---hcCCcc-------c--CCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhh---
Confidence 3799999999998764321 122110 1 11210 111223567788999999999877766322111
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
...+||+++ .++|+.|+.+...+...+
T Consensus 209 -----~g~~~~~~g---~~~s~~e~~~~~~~~~g~ 235 (299)
T 2wm3_A 209 -----VGQNIGLST---CRHTAEEYAALLTKHTRK 235 (299)
T ss_dssp -----TTCEEECCS---EEECHHHHHHHHHHHHSS
T ss_pred -----CCeEEEeee---ccCCHHHHHHHHHHHHCC
Confidence 235899874 369999999998876543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 422 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.46 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.38 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.38 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.26 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.25 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.24 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.24 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.22 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.15 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.11 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.1 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.09 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.09 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.08 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.04 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.96 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 98.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.81 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.8 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.71 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.65 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.51 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 97.88 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 97.83 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 97.7 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.33 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.3 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.21 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.14 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.14 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.13 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.11 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.09 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.07 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.04 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.03 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.03 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.02 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.95 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.92 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.91 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.89 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 96.87 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 96.82 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 96.82 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 96.78 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.78 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.74 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 96.68 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.67 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 96.67 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 96.65 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 96.62 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 96.52 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.52 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 96.49 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.45 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 96.42 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.41 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.35 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 96.34 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 96.26 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.22 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.2 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.15 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 96.12 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.05 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 95.93 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.9 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 95.78 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 95.77 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 95.57 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 95.47 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 95.47 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.45 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 95.38 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 95.2 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 94.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 94.82 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 94.8 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 94.67 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 94.58 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 94.48 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 94.23 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 94.22 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 94.2 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 94.2 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 94.18 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 94.1 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 93.62 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 93.49 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 93.13 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 92.83 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 92.44 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 92.15 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 92.13 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 91.23 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 89.73 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 89.63 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 89.4 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 88.14 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 87.78 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 87.51 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 84.76 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 83.18 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 81.91 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 81.82 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=2.9e-14 Score=138.45 Aligned_cols=109 Identities=14% Similarity=0.142 Sum_probs=85.1
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcC--CCce
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMT--HLEA 375 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~r 375 (422)
..+++++++||++|. ++++.+++ ++|+|||+||..+.. .++...+++|+.||.|||++|++.+ +.+|
T Consensus 53 ~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r 126 (357)
T d1db3a_ 53 CNPKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTR 126 (357)
T ss_dssp --CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCE
T ss_pred cCCCeEEEEeecCCH------HHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcE
Confidence 346899999999987 45566665 459999999987644 4566778999999999999999865 2457
Q ss_pred EEEEeCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|||+||+.+||. ..+++|+.+ .+|.+.|+.+|+++|.++..+
T Consensus 127 ~i~~SS~~vYG~~~~~~~~E~~~---~~P~~~Y~~sK~~~E~~~~~~ 170 (357)
T d1db3a_ 127 FYQASTSELYGLVQEIPQKETTP---FYPRSPYAVAKLYAYWITVNY 170 (357)
T ss_dssp EEEEEEGGGGTTCCSSSBCTTSC---CCCCSHHHHHHHHHHHHHHHH
T ss_pred EEEEEchhhhCCCCCCCcCCCCC---CCCCChHHHHHHHHHHHHHHH
Confidence 999999988875 457888654 445567889999999998765
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.38 E-value=2.9e-13 Score=130.03 Aligned_cols=106 Identities=20% Similarity=0.160 Sum_probs=83.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
+++++++||++|. +.+..+++ ++|+|||+||..+... ++.+.+++|+.||+++|++|++.+ +++|||+
T Consensus 50 ~~~~~~~~Dl~d~------~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~ 122 (338)
T d1udca_ 50 KHPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred CCCEEEEeecCCH------HHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEec
Confidence 5799999999987 34566655 7999999999877553 455779999999999999999987 9999999
Q ss_pred eCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 380 STAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 380 SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
||..+++.. .+..|+ .++.+|...|+.+|..+|+++.+
T Consensus 123 Ss~~vy~~~~~~~~~e~--~~~~~p~~~Y~~sK~~~e~~~~~ 162 (338)
T d1udca_ 123 SSATVYGDQPKIPYVES--FPTGTPQSPYGKSKLMVEQILTD 162 (338)
T ss_dssp EEGGGGCSCCSSSBCTT--SCCCCCSSHHHHHHHHHHHHHHH
T ss_pred CcceEEccccccccccc--cccCCCcchHHHHHhhhhHHHHH
Confidence 999887653 233442 23456777888899999988764
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.38 E-value=2.5e-13 Score=130.91 Aligned_cols=107 Identities=19% Similarity=0.199 Sum_probs=84.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
.++++++++|++|. ++++.+.. ++|+|||+||..+.. ..+....++|+.||.+++++|++.+ +++|||
T Consensus 50 ~~~v~~~~~Dl~d~------~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~ 122 (347)
T d1z45a2 50 KHHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVF 122 (347)
T ss_dssp TSCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEE
T ss_pred ccCCeEEEeecCCH------HHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEe
Confidence 35789999999987 34555544 799999999987644 3445678899999999999999986 999999
Q ss_pred EeCCccccCC------CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDR------EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~------~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||+.++|.. .+++|+ .|..|.+.|+.+|.++|+++..+
T Consensus 123 ~SS~~vyg~~~~~~~~~~~~e~---~~~~p~~~Y~~sK~~~E~~~~~~ 167 (347)
T d1z45a2 123 SSSATVYGDATRFPNMIPIPEE---CPLGPTNPYGHTKYAIENILNDL 167 (347)
T ss_dssp EEEGGGGCCGGGSTTCCSBCTT---SCCCCCSHHHHHHHHHHHHHHHH
T ss_pred ecceeeecCcccCCCCCccccc---cCCCCCChhHhHHHHHHHHHHHH
Confidence 9999888753 235553 45566678999999999988654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=7.9e-12 Score=118.63 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=82.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVST 381 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS 381 (422)
.++++..+|+.+.. ..++|+||||||.++.. .++.+.+++|+.||.+|+++|++.+ + ++||+||
T Consensus 49 ~~~d~~~~~~~~~~-----------~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS 115 (312)
T d2b69a1 49 ENFELINHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLAST 115 (312)
T ss_dssp TTEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEE
T ss_pred CceEEEehHHHHHH-----------HcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEC
Confidence 45677777776542 24799999999987754 3456678999999999999999976 4 8999999
Q ss_pred CccccC--CCccccccc--CCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 382 AYCNCD--REEVREIIY--SPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 382 ~~~~g~--~~~~~E~~~--~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+||. ..+.+|+.. ..|.+|.+.|+.+|.++|.++..+
T Consensus 116 ~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 158 (312)
T d2b69a1 116 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 158 (312)
T ss_dssp GGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred hheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 988875 346777643 358899999999999999999765
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.25 E-value=3.7e-12 Score=123.52 Aligned_cols=111 Identities=20% Similarity=0.188 Sum_probs=84.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcC-------
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMT------- 371 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~------- 371 (422)
.++++++++|++|+. .++.+++ ++|+||||||..+... ++...+++|+.||.+++++|++.+
T Consensus 49 ~~~~~~~~~Dl~d~~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~ 122 (361)
T d1kewa_ 49 SNRYNFEHADICDSA------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122 (361)
T ss_dssp CTTEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH
T ss_pred cCCcEEEEccCCCHH------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 468999999999973 4455543 6899999999877553 345678999999999999998764
Q ss_pred -CCceEEEEeCCccccCCC--cccccc-------cCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 -HLEALIHVSTAYCNCDRE--EVREII-------YSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 -~~~r~v~~SS~~~~g~~~--~~~E~~-------~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++++|||+||+.++|... +..|+. ...|..|.+.|+.+|.++|.++..+
T Consensus 123 ~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~ 181 (361)
T d1kewa_ 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181 (361)
T ss_dssp HHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 145899999998888632 222211 1356778889999999999999764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=7.5e-12 Score=119.88 Aligned_cols=108 Identities=14% Similarity=0.162 Sum_probs=82.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcC--CCceE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMT--HLEAL 376 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~--~~~r~ 376 (422)
..+++++.||++|++ .+..+. .++++|+|+||..+... +....+++|+.||.+++++|++++ +.++|
T Consensus 55 ~~~~~~~~~Dl~d~~------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~ 128 (347)
T d1t2aa_ 55 EGNMKLHYGDLTDST------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKF 128 (347)
T ss_dssp --CEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEE
T ss_pred cCCcEEEEeecCCch------hhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEE
Confidence 357899999999873 344444 36789999999877543 344567999999999999999875 23589
Q ss_pred EEEeCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+||+.+||. ..+++|+. |.+|.+.|+.+|.++|+++..+
T Consensus 129 i~~SS~~vyg~~~~~~~~E~~---~~~P~~~Yg~sK~~aE~~~~~~ 171 (347)
T d1t2aa_ 129 YQASTSELYGKVQEIPQKETT---PFYPRSPYGAAKLYAYWIVVNF 171 (347)
T ss_dssp EEEEEGGGTCSCSSSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred EEecchheecCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHH
Confidence 99999988876 34688865 4455567899999999998764
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.24 E-value=1e-11 Score=118.14 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=86.9
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
...+++++.+|+.+.. ........+|.|+|+|+...... +..+.+++|+.||.+++++|++.+ +++|||+
T Consensus 53 ~~~~~~~~~~d~~~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~ 125 (322)
T d1r6da_ 53 ADPRLRFVHGDIRDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHV 125 (322)
T ss_dssp TCTTEEEEECCTTCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEE
T ss_pred cCCCeEEEEeccccch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEe
Confidence 3468999999998873 44566788999999998876543 345568999999999999999987 8999999
Q ss_pred eCCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+.++|. ..+++|+. |.+|.+.|+.+|.++|.++..+
T Consensus 126 Ss~~~yg~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 165 (322)
T d1r6da_ 126 STNQVYGSIDSGSWTESS---PLEPNSPYAASKAGSDLVARAY 165 (322)
T ss_dssp EEGGGGCCCSSSCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred ecceeecCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHH
Confidence 99988876 34688854 5555667889999999998765
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.22 E-value=1.4e-11 Score=118.01 Aligned_cols=107 Identities=16% Similarity=0.133 Sum_probs=86.5
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
.++++++.+|+.|. ........+.+.|+|+|+..+.. .++...+++|+.||.+|+++|++++ +++|||+|
T Consensus 69 ~~~~~~~~~d~~d~------~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~S 141 (341)
T d1sb8a_ 69 WSNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAA 141 (341)
T ss_dssp HTTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred cCCeeEEeeccccc------cccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcc
Confidence 35789999999886 34466677899999999987755 3445568999999999999999987 89999999
Q ss_pred CCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|+.+||. ..+.+|+. |.+|.+.|+.+|+++|+++..+
T Consensus 142 S~~vyg~~~~~~~~E~~---~~~p~~~Y~~sK~~~E~~~~~~ 180 (341)
T d1sb8a_ 142 SSSTYGDHPGLPKVEDT---IGKPLSPYAVTKYVNELYADVF 180 (341)
T ss_dssp EGGGGTTCCCSSBCTTC---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceeeCCCCCCCccCCC---CCCCCCcchHHHHHHHHHHHHH
Confidence 9988876 34688865 4455567889999999998765
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.15 E-value=8.2e-11 Score=112.41 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=83.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
.++++++.||+++.+ +..+.+.+++|+|||+||.++... ++...+++|+.||.+++++|++.+ .+++|+|
T Consensus 44 ~~~~~~i~~Di~~~~-----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~s 116 (342)
T d2blla1 44 HPHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPS 116 (342)
T ss_dssp CTTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCeEEEECccCChH-----HHHHHHHhCCCccccccccccccccccCCcccccccccccccccccccccc--ccccccc
Confidence 468999999999864 223445678999999999987553 344668999999999999999976 4677889
Q ss_pred CCccccCC--Ccccccc----cCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREII----YSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~----~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|+.+++.. ...+|.. ..++..|...|+.+|.++|+++..+
T Consensus 117 s~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 162 (342)
T d2blla1 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162 (342)
T ss_dssp CGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCCcchhhhcccchhhhhhhh
Confidence 98777653 2233322 2345678999999999999998764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.11 E-value=3.2e-11 Score=117.71 Aligned_cols=111 Identities=14% Similarity=0.023 Sum_probs=80.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh------hHHHHHHhhHHHHHHHHHHHHhcCCCce
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE------ALKLSVTINMLGTKRLVELCHEMTHLEA 375 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~------~~~~~~~~Nv~gt~~ll~~a~~~~~~~r 375 (422)
.++++++.||++|.+ .++.+++ ++|+|||+||...... .+...+++|+.||.+++++|++.+..++
T Consensus 66 ~~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~ 139 (393)
T d1i24a_ 66 GKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECH 139 (393)
T ss_dssp CCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccc
Confidence 367899999999873 4556654 5699999999876442 2335688999999999999999874456
Q ss_pred EEEEeCCccccCC-Ccc-------cc----cccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 376 LIHVSTAYCNCDR-EEV-------RE----IIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 376 ~v~~SS~~~~g~~-~~~-------~E----~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++++||..+++.. .+. +| +..+.|.+|.+.|+.+|.++|.++..+
T Consensus 140 ~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~ 196 (393)
T d1i24a_ 140 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 196 (393)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccc
Confidence 7777777665531 111 11 122356778888999999999998654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.10 E-value=8.7e-11 Score=112.60 Aligned_cols=110 Identities=13% Similarity=0.063 Sum_probs=85.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
....++.||+.|... +..++.++|+|+|+|+......+....++.|+.||.++|++|++.+++++|||+||+.+
T Consensus 62 ~~~~~~~~Dl~~~~~------~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~ 135 (342)
T d1y1pa1 62 RFETAVVEDMLKQGA------YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVS 135 (342)
T ss_dssp TEEEEECSCTTSTTT------TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGG
T ss_pred cccEEEeccccchhh------hhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccccccee
Confidence 445678899998753 35667899999999999887777777889999999999999999766999999999744
Q ss_pred ccC-C-----Ccccccc-------------cCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 385 NCD-R-----EEVREII-------------YSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 385 ~g~-~-----~~~~E~~-------------~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+. . ...+|+. ...|.+|.+.|+.+|..+|.++..|
T Consensus 136 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~ 190 (342)
T d1y1pa1 136 ALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190 (342)
T ss_dssp TCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHh
Confidence 322 1 1122321 2357789999999999999877654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=2.8e-10 Score=107.25 Aligned_cols=96 Identities=10% Similarity=0.030 Sum_probs=74.8
Q ss_pred HHHHHHh--cCccEEEEcccccChh----hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccCC--Ccccccc
Q psy16526 324 NDQKILK--QNVSVVFHSAATVKFD----EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDR--EEVREII 395 (422)
Q Consensus 324 ~~~~~~~--~~~d~ViH~Aa~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~~--~~~~E~~ 395 (422)
..+..++ .++|.|+|+|+.++.. .+..+.+++|+.||.+++++|++.+ +++|||+||..+||.. .+++|+.
T Consensus 44 ~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~ 122 (315)
T d1e6ua_ 44 RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESE 122 (315)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGG
T ss_pred HHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCc
Confidence 4444444 3689999999876532 3445668899999999999999987 9999999999888863 4677765
Q ss_pred cC--CCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 396 YS--PPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 396 ~~--~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .|..|.+.|+.+|..+|+++..+
T Consensus 123 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 149 (315)
T d1e6ua_ 123 LLQGTLEPTNEPYAIAKIAGIKLCESY 149 (315)
T ss_dssp TTSSCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 43 35556788999999999998765
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=9.5e-11 Score=112.23 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=79.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
..+++++++|++|.+ .++... .++++|+|+||..+... ++.+.+++|+.||.+++++|++.+ +++|+|
T Consensus 57 ~~~~~~~~~Dl~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~ 129 (346)
T d1ek6a_ 57 GRSVEFEEMDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVF 129 (346)
T ss_dssp TCCCEEEECCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCcEEEEeeccccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccc
Confidence 467899999999873 344444 35678999999877543 345678999999999999999987 999999
Q ss_pred EeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||+.++|......++.......|.+.|+.+|..+|+.+.++
T Consensus 130 ~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~ 171 (346)
T d1ek6a_ 130 SSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 171 (346)
T ss_dssp EEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred cccceeeeccccccccccccccccCChHHHHHHHHHHHHHHH
Confidence 999977776432222111223334456788888888877654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.08 E-value=9.1e-11 Score=113.11 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=83.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh----hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD----EALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
...++..+|+++. +++..+.+++|+|||+|+..... .........|+.||.+++++|++.+ +++|||+|
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~S 130 (363)
T d2c5aa1 58 FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYAS 130 (363)
T ss_dssp TCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ccCcEEEeechhH------HHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhC-cccccccc
Confidence 4457888999876 34566778999999999876642 3455678899999999999999987 99999999
Q ss_pred CCccccCC--Ccccccc----cCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDR--EEVREII----YSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~--~~~~E~~----~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|+.++|.. .+.+|+. ...|.+|.+.|+.+|.++|+++..+
T Consensus 131 S~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~ 176 (363)
T d2c5aa1 131 SACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHY 176 (363)
T ss_dssp EGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 99877652 2333221 2356777778999999999988764
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.04 E-value=2.5e-10 Score=109.36 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=84.3
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEE
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHV 379 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~ 379 (422)
..++++++.||++|. ..+..+..+++.|+|+|+..... .++.+.+++|+.||.+++++|++.+ .++|++
T Consensus 50 ~~~~i~~~~~Di~d~------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ 121 (346)
T d1oc2a_ 50 LGDRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHV 121 (346)
T ss_dssp CSSSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEE
T ss_pred hcCCeEEEEccCCCH------HHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--cccccc
Confidence 346899999999987 45677888999999999987754 3345678999999999999999976 589999
Q ss_pred eCCccccCCC--------------cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 380 STAYCNCDRE--------------EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 380 SS~~~~g~~~--------------~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
||+.+||... ..+| ..|..|.+.|+.+|.++|.++..+
T Consensus 122 ss~~vyg~~~~~~~~~~~~~~~~~~~~e---~~~~~p~s~Y~~sK~~~E~~~~~~ 173 (346)
T d1oc2a_ 122 STDEVYGDLPLREDLPGHGEGPGEKFTA---ETNYNPSSPYSSTKAASDLIVKAW 173 (346)
T ss_dssp EEGGGGCCBCCGGGSTTTTCSTTSSBCT---TSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred ccceEecccCccccccccccCccccccc---CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9988876421 1222 346667788999999999988764
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.00 E-value=4.1e-10 Score=109.39 Aligned_cols=108 Identities=12% Similarity=0.088 Sum_probs=83.0
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceE
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEAL 376 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~ 376 (422)
...++.++.||++|++ .++.++ .++|+|||+||..... .......++|+.||.+++++|++.+ ++++
T Consensus 67 ~~~~~~~~~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~ 139 (383)
T d1gy8a_ 67 ADRYAALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKI 139 (383)
T ss_dssp TTCCCEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEE
T ss_pred cccceEEEECcccCHH------HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccc
Confidence 3456889999999973 344444 4679999999988755 2344568899999999999999987 8999
Q ss_pred EEEeCCccccCCC---------cccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 377 IHVSTAYCNCDRE---------EVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 377 v~~SS~~~~g~~~---------~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++.||..+++... +..| ..+.+|.+.|+.+|+.+|+++..+
T Consensus 140 ~~~~s~~~~~~~~~~~~~~~~~~~~e---~~~~~p~~~Y~~sK~~~e~~~~~~ 189 (383)
T d1gy8a_ 140 IFSSSAAIFGNPTMGSVSTNAEPIDI---NAKKSPESPYGESKLIAERMIRDC 189 (383)
T ss_dssp EEEEEGGGTBSCCC-----CCCCBCT---TSCCBCSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccc---ccCCCCCCHHHhhHhHHHHHHHHH
Confidence 9999987665422 2333 356677788999999999998765
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.96 E-value=7.4e-10 Score=104.45 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=81.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
.++++++.+|++|.. .+.... ...++++|+|+..+.. .+..+.++.|+.||.++|++|++.+..++|++
T Consensus 48 ~~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~ 121 (321)
T d1rpna_ 48 EGDIQYEDGDMADAC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121 (321)
T ss_dssp GGGEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCCcEEEEccccChH------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccccc
Confidence 367999999999873 333333 3568999999887654 34566789999999999999999875668999
Q ss_pred EeCCccccCC--CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 379 VSTAYCNCDR--EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 379 ~SS~~~~g~~--~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+||+.++|.. ...+|+ .|.+|.+.|+.+|.++|+++..+
T Consensus 122 ~Ss~~~~~~~~~~~~~E~---~~~~p~~~Y~~sK~~~E~~~~~~ 162 (321)
T d1rpna_ 122 ASTSEMFGLIQAERQDEN---TPFYPRSPYGVAKLYGHWITVNY 162 (321)
T ss_dssp EEEGGGGCSCSSSSBCTT---SCCCCCSHHHHHHHHHHHHHHHH
T ss_pred ccchhhcCcccCCCCCCC---CCccccChhHHHHHHHHHHHHHH
Confidence 9998777653 356674 45556667888999999988764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=98.96 E-value=6.1e-10 Score=105.30 Aligned_cols=109 Identities=22% Similarity=0.162 Sum_probs=76.9
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
.++++++.||+++. +++..+.+ ++|+|||+||.+.... ++....++|+.||.+||++|.+.+ ++++++
T Consensus 48 ~~~~~~i~~Di~~~------~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~ 120 (338)
T d1orra_ 48 LGNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNII 120 (338)
T ss_dssp TCCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred cCCcEEEEcccCCH------HHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccc-cccccc
Confidence 36789999999987 34556654 4699999999987553 456678999999999999999987 666666
Q ss_pred EeCC-ccccCC--Cccccc-------------ccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 379 VSTA-YCNCDR--EEVREI-------------IYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 379 ~SS~-~~~g~~--~~~~E~-------------~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.||+ ..++.. .+..+. ....+.+|...|+.+|...|.++..
T Consensus 121 ~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~ 177 (338)
T d1orra_ 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177 (338)
T ss_dssp EEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhh
Confidence 5554 333321 111110 1124667888999999998887654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.81 E-value=2.9e-09 Score=101.00 Aligned_cols=108 Identities=15% Similarity=0.138 Sum_probs=80.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh--cCccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcC----CCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK--QNVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMT----HLE 374 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~--~~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~----~~~ 374 (422)
...++++.+|+++.+ .+...+ .++|+|||+||..... +++....+.|+.|+.+++++|+.+. ...
T Consensus 55 ~~~~~~~~~Di~~~~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 128 (339)
T d1n7ha_ 55 KALMKLHYADLTDAS------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTV 128 (339)
T ss_dssp -CCEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccceEEEEccccCHH------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccce
Confidence 356789999999863 334433 4789999999987755 3455678999999999999998642 234
Q ss_pred eEEEEeCCccccCC-CcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDR-EEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~-~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++++.||+++++.. .+.+|+ .|.+|.+.|+.+|+.+|.++..+
T Consensus 129 ~~~~~ss~~~~~~~~~~~~E~---~~~~p~~~Y~~sK~~~E~~~~~~ 172 (339)
T d1n7ha_ 129 KYYQAGSSEMFGSTPPPQSET---TPFHPRSPYAASKCAAHWYTVNY 172 (339)
T ss_dssp EEEEEEEGGGGTTSCSSBCTT---SCCCCCSHHHHHHHHHHHHHHHH
T ss_pred eeeecccceecccCCCCCCCC---CCCCCcchhhHHHHHHHHHHHHH
Confidence 78888888877664 457774 45667778888999999988654
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.80 E-value=2.7e-09 Score=98.75 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=71.1
Q ss_pred eCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy16526 311 LGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 311 ~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~ 385 (422)
.+|++|+ +.++.+++ ++|+||||||.++.. ..+...++.|+.++.+|+++|++.+ .+++++||+.++
T Consensus 37 ~~Dl~~~------~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~ 108 (298)
T d1n2sa_ 37 CGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVF 108 (298)
T ss_dssp CCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGS
T ss_pred cCcCCCH------HHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhccc--cccccccccccc
Confidence 3566554 34555554 569999999987754 3455678999999999999999865 578888887665
Q ss_pred cC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 386 CD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 386 g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+. ..+.+|+..+ +|.+.|+.+|..+|..+...
T Consensus 109 ~~~~~~~~~E~~~~---~p~~~y~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 109 PGTGDIPWQETDAT---SPLNVYGKTKLAGEKALQDN 142 (298)
T ss_dssp CCCTTCCBCTTSCC---CCSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcccccc---CCCchHhhhhhhhhhhHHhh
Confidence 44 3467885544 45556777888888877653
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.71 E-value=1.3e-08 Score=97.03 Aligned_cols=106 Identities=16% Similarity=0.196 Sum_probs=72.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChh---hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEE
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFD---EALKLSVTINMLGTKRLVELCHEMTHLEALIH 378 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~ 378 (422)
.++++++.||++|++ .+.++.+ .+|+|+|+||..... ..+....++|+.||.+++++|++.+..+.+++
T Consensus 55 ~~~i~~~~~Dl~d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~ 128 (356)
T d1rkxa_ 55 ADGMQSEIGDIRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVN 128 (356)
T ss_dssp TTTSEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEE
T ss_pred ccCCeEEEeeccChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccc
Confidence 357999999999873 3344443 679999999987654 34556789999999999999999775566666
Q ss_pred EeCCccccCC---CcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 379 VSTAYCNCDR---EEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 379 ~SS~~~~g~~---~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
.||+++++.. .+.+|+. |..|.+.|+.+|..+|..+.
T Consensus 129 ~s~~~~~~~~~~~~~~~~~~---~~~p~~~y~~~k~~~e~~~~ 168 (356)
T d1rkxa_ 129 ITSDKCYDNKEWIWGYRENE---AMGGYDPYSNSKGCAELVTS 168 (356)
T ss_dssp ECCGGGBCCCCSSSCBCTTS---CBCCSSHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc---ccCCCCccccccccchhhhh
Confidence 6666554432 2455543 34444455566666665554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=1.4e-08 Score=91.59 Aligned_cols=97 Identities=12% Similarity=0.017 Sum_probs=76.8
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
..++++...+|+.+.+ ++...++++|+|||+||......+..++.++|+.++.+++++|++.+ +++|||+||.
T Consensus 57 ~~~~i~~~~~D~~~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~ 129 (232)
T d2bkaa1 57 AYKNVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSK 129 (232)
T ss_dssp GGGGCEEEECCGGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCT
T ss_pred ccceeeeeeecccccc------cccccccccccccccccccccccchhhhhhhcccccceeeecccccC-ccccccCCcc
Confidence 3456788889988753 45677789999999999876666667788999999999999999987 9999999998
Q ss_pred ccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 383 YCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 383 ~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++. + .+.|..+|+.+|..+..+
T Consensus 130 ~~~~~-----------~---~~~Y~~~K~~~E~~l~~~ 153 (232)
T d2bkaa1 130 GADKS-----------S---NFLYLQVKGEVEAKVEEL 153 (232)
T ss_dssp TCCTT-----------C---SSHHHHHHHHHHHHHHTT
T ss_pred ccccC-----------c---cchhHHHHHHhhhccccc
Confidence 65422 1 134778899889887654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.51 E-value=1e-07 Score=83.92 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=72.5
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTA 382 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~ 382 (422)
...+++++.||++|+ +++.++++++|+|||++|...... ..+++..+++++++++++.+ ++|||++||+
T Consensus 44 ~~~~~~~~~gD~~d~------~~l~~al~~~d~vi~~~g~~~~~~----~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~ 112 (205)
T d1hdoa_ 44 GPRPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKAHG-VDKVVACTSA 112 (205)
T ss_dssp SCCCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHHHT-CCEEEEECCG
T ss_pred cccccccccccccch------hhHHHHhcCCCEEEEEeccCCchh----hhhhhHHHHHHHHHHHHhcC-CCeEEEEeee
Confidence 346789999999987 467888899999999998653221 23567889999999999987 9999999998
Q ss_pred ccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 383 YCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 383 ~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.++++... .......+...|..+|+++++
T Consensus 113 ~~~~~~~~--------~~~~~~~~~~~~~~~e~~l~~ 141 (205)
T d1hdoa_ 113 FLLWDPTK--------VPPRLQAVTDDHIRMHKVLRE 141 (205)
T ss_dssp GGTSCTTC--------SCGGGHHHHHHHHHHHHHHHH
T ss_pred eccCCCcc--------ccccccccchHHHHHHHHHHh
Confidence 76544221 112234566677777887764
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.88 E-value=6.4e-06 Score=72.15 Aligned_cols=76 Identities=8% Similarity=-0.008 Sum_probs=58.8
Q ss_pred hcCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHH
Q psy16526 330 KQNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIET 408 (422)
Q Consensus 330 ~~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~ 408 (422)
...+|+||||+|..... ....+..+.|+.++.+++++|++.+ +++|+|+||..+++. +. +.|..
T Consensus 60 ~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~-----------~~---~~y~~ 124 (212)
T d2a35a1 60 DGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK-----------SS---IFYNR 124 (212)
T ss_dssp CSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-----------CS---SHHHH
T ss_pred ccchheeeeeeeeeccccccccccccchhhhhhhccccccccc-ccccccccccccccc-----------cc---cchhH
Confidence 35689999999876433 3445678899999999999999986 999999999866432 11 35778
Q ss_pred HhhCCHHHhhhc
Q psy16526 409 MEWMDDSLVNTL 420 (422)
Q Consensus 409 ~K~~~E~~~~~~ 420 (422)
+|..+|+.+.+.
T Consensus 125 ~K~~~E~~l~~~ 136 (212)
T d2a35a1 125 VKGELEQALQEQ 136 (212)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHhhhcccc
Confidence 899999887654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.83 E-value=4.4e-05 Score=69.01 Aligned_cols=109 Identities=20% Similarity=0.314 Sum_probs=73.9
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHHhc--CccEEEEcccccChhh---hHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy16526 306 KIKPILGDITEPELGISQNDQKILKQ--NVSVVFHSAATVKFDE---ALKLSVTINMLGTKRLVELCHEMTHLEALIHVS 380 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~~~--~~d~ViH~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~S 380 (422)
+.+++..|..+.++ .+..++++.++ ++|+|||+|+...... .+......|+.++.++++.++... ..++++|
T Consensus 25 g~~Vi~~~r~~~D~-~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~s 101 (281)
T d1vl0a_ 25 NVEVIPTDVQDLDI-TNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQIS 101 (281)
T ss_dssp SEEEEEECTTTCCT-TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEE
T ss_pred CCEEEEeechhccC-CCHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccccc--ccccccc
Confidence 34555555443321 12344555554 6799999999887543 345567889999999999998854 6788888
Q ss_pred CCccccC--CCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCD--REEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~--~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|..+++. ..+..|+. +.+|...|+.+|...|.++++.
T Consensus 102 s~~v~~~~~~~~~~e~~---~~~~~~~~~~~k~~~e~~~~~~ 140 (281)
T d1vl0a_ 102 TDYVFDGEAKEPITEFD---EVNPQSAYGKTKLEGENFVKAL 140 (281)
T ss_dssp EGGGSCSCCSSCBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceeeeccccccccccc---cccchhhhhhhhhHHHHHHHHh
Confidence 8766665 34567754 4445556778888888888764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.70 E-value=1.9e-05 Score=72.15 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=59.8
Q ss_pred cCccEEEEcccccChh-hhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCccccC-C-CcccccccCCCCCHHHHHH
Q psy16526 331 QNVSVVFHSAATVKFD-EALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYCNCD-R-EEVREIIYSPPYDPQKIIE 407 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~~g~-~-~~~~E~~~~~p~~p~~~y~ 407 (422)
..+++|+|+||..... .+.....+.|+.++.+++++++..+ + ++++.||+.+++. . ...+|+.... |.+.|+
T Consensus 67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~~~~~~~~~~~---~~~~Y~ 141 (307)
T d1eq2a_ 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEK---PLNVYG 141 (307)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCC---CSSHHH
T ss_pred cchhhhhhhccccccccccccccccccccccccccccccccc-c-cccccccccccccccccccccccccc---cccccc
Confidence 4678999999977654 3445567889999999999999976 5 4666666655443 2 2344443334 445678
Q ss_pred HHhhCCHHHhhhc
Q psy16526 408 TMEWMDDSLVNTL 420 (422)
Q Consensus 408 ~~K~~~E~~~~~~ 420 (422)
.+|.++|.++..+
T Consensus 142 ~~K~~~e~~~~~~ 154 (307)
T d1eq2a_ 142 YSKFLFDEYVRQI 154 (307)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cccchhhhhcccc
Confidence 8888888888765
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.33 E-value=0.00025 Score=63.54 Aligned_cols=98 Identities=11% Similarity=0.079 Sum_probs=66.8
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++..++.+|++|++ +.+++ ..++|++||+||.... .+.+++.+++|+.|+..+.+.+..
T Consensus 51 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~ 124 (244)
T d1nffa_ 51 ADAARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK 124 (244)
T ss_dssp GGGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hCcceEEEeecCCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHh
Confidence 356888999999974 32332 2468999999997642 145667799999999999886643
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+... ......|..+|..-+.+.+.+
T Consensus 125 ~m~~~~-~G~Ii~isS~~~~~~------------~~~~~~Y~asKaal~~ltk~l 166 (244)
T d1nffa_ 125 PMKEAG-RGSIINISSIEGLAG------------TVACHGYTATKFAVRGLTKST 166 (244)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-cceEEeccccccccc------------cccccchhhHHHHHHHHHHHH
Confidence 22 368999999765321 112346777777766665544
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.30 E-value=0.0004 Score=62.52 Aligned_cols=98 Identities=15% Similarity=0.044 Sum_probs=67.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|+++++ +.+++ ..++|++||+||..... +.++..+++|+.|+..+.+++..
T Consensus 50 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p 123 (254)
T d1hdca_ 50 GDAARYQHLDVTIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIP 123 (254)
T ss_dssp GGGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEcccCCHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHH
Confidence 357889999999873 33333 24789999999876421 34566799999999999988753
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+... ......|..+|..-+.+.+.+
T Consensus 124 ~m~~~~-~G~II~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 165 (254)
T d1hdca_ 124 AMKDAG-GGSIVNISSAAGLMG------------LALTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcC-CCeecccccchhccc------------ccchhhHHHHHHHHHHHHHHH
Confidence 23 469999999765321 112346777777666665543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.21 E-value=0.00051 Score=61.20 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=64.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +.+++ ..++|++||+||.... .+.++..+++|+.|+..+.+++..
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (240)
T d2bd0a1 57 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 130 (240)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH
Confidence 56888999999974 32332 2368999999997542 145566799999999999888764
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+ -.++|++||..+... .| ....|..+|..-+.+.+.
T Consensus 131 m~~~~-~G~Ii~isS~~~~~~----------~~--~~~~Y~asK~al~~lt~~ 170 (240)
T d2bd0a1 131 MERQH-SGHIFFITSVAATKA----------FR--HSSIYCMSKFGQRGLVET 170 (240)
T ss_dssp HHHHT-CEEEEEECCGGGTSC----------CT--TCHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCceEEEechhhcCC----------CC--CChHHHHHHHHHHHHHHH
Confidence 22 368999999765321 11 234566666655555443
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.14 E-value=0.00076 Score=60.53 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=65.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++..+.+|++|++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+.++.+++..
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 123 (255)
T d1gega_ 50 GHAVAVKVDVSDRD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 123 (255)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcch
Confidence 46888999999974 33332 2478999999997541 134566799999999999887643
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++-.+++++||..+.. |...+..|..+|..-+.+.+.+
T Consensus 124 m~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~ltk~l 165 (255)
T d1gega_ 124 FKKEGHGGKIINACSQAGHV------------GNPELAVYSSSKFAVRGLTQTA 165 (255)
T ss_dssp HHHHTSCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccccccchhhcc------------cCcccccchhCHHHHHhhHHHH
Confidence 23346799999875531 1112446777777666665543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.14 E-value=0.0006 Score=61.30 Aligned_cols=99 Identities=13% Similarity=0.044 Sum_probs=66.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++..+.+|++|++ +.+++ ..++|++||.||.... .+.++..+++|+.|+..+.+++..
T Consensus 50 ~~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 123 (256)
T d1k2wa_ 50 GPAACAIALDVTDQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVAR 123 (256)
T ss_dssp CTTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccc
Confidence 357889999999974 33333 2378999999997542 144566799999999999886432
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++-.++|++||..+.. |...+..|..+|..-+.+.+.+
T Consensus 124 ~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~l 166 (256)
T d1k2wa_ 124 AMIAGGRGGKIINMASQAGRR------------GEALVGVYCATKAAVISLTQSA 166 (256)
T ss_dssp HHHHHTSCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred hhHHhccCCccccccchhhcc------------ccccccchhhhhhHHHHHHHHH
Confidence 22246899999976531 1112346777777666665543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.00034 Score=62.56 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=65.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.+...+.+|+++++ +.+++. .++|++||+|+.... .+.++..+++|+.|+..+.+++...
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 123 (243)
T d1q7ba_ 50 ANGKGLMLNVTDPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRA 123 (243)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHH
Confidence 46788999999873 223322 368999999987542 1455667999999999999888532
Q ss_pred ---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 ---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+... .| ....|..+|..-+.+.+.+
T Consensus 124 m~~~~~G~II~isS~~~~~~----------~~--~~~~Y~asKaal~~lt~~l 164 (243)
T d1q7ba_ 124 MMKKRHGRIITIGSVVGTMG----------NG--GQANYAAAKAGLIGFSKSL 164 (243)
T ss_dssp HHHHTCEEEEEECCHHHHHC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEeeeecchhhcCC----------CC--CCHHHHHHHHHHHHHHHHH
Confidence 12368999999765321 11 2345777777666665543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.11 E-value=0.00062 Score=60.51 Aligned_cols=101 Identities=12% Similarity=0.098 Sum_probs=65.7
Q ss_pred ccCcCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 301 SNELAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 301 ~~~~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
....+++..+++|++|++ +.+++ ..++|++||+||.... .+.+++.+++|+.|+..+.+.
T Consensus 41 ~~~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~ 114 (237)
T d1uzma1 41 SGAPKGLFGVEVDVTDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQR 114 (237)
T ss_dssp SCCCTTSEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cchhcCceEEEEecCCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhh
Confidence 344567788999999974 22332 2368999999997542 145567799999999888776
Q ss_pred HH----hcCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CH----EMTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~----~~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+. +.+ -.++|++||..+... ......|..+|..-+.+.+.+
T Consensus 115 ~~~~m~~~~-~g~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 159 (237)
T d1uzma1 115 ASRSMQRNK-FGRMIFIGSVSGLWG------------IGNQANYAASKAGVIGMARSI 159 (237)
T ss_dssp HHHHHHHTT-CEEEEEECCCCC-----------------CCHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccC-CCceEEEcchhhccC------------CcccHHHHHHHHHHHHHHHHH
Confidence 54 333 468999999765321 112346777777666655543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.00072 Score=60.38 Aligned_cols=103 Identities=15% Similarity=0.103 Sum_probs=67.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc---
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM--- 370 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 370 (422)
..++..+.+|++|++-. ++.++.. ..++|++||+||..... +.+++.+++|+.|+.++.+++...
T Consensus 55 ~~~~~~~~~Dvs~~~~v--~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~ 132 (244)
T d1yb1a_ 55 GAKVHTFVVDCSNREDI--YSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK 132 (244)
T ss_dssp TCCEEEEECCTTCHHHH--HHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeeCCCHHHH--HHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHh
Confidence 35788999999998411 0111111 23689999999976421 334567999999999998876531
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++-.++|++||..+.. |...+..|..+|..-+.+.+.+
T Consensus 133 ~~~G~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~~~~~L 170 (244)
T d1yb1a_ 133 NNHGHIVTVASAAGHV------------SVPFLLAYCSSKFAAVGFHKTL 170 (244)
T ss_dssp TTCEEEEEECCCC-CC------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEeecchhcC------------CCCCcHHHHHHHHHHHHHHHHH
Confidence 2246899999986531 2223567888887766655543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.07 E-value=0.00098 Score=59.69 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=65.2
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++..+.+|+++++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+++..
T Consensus 54 g~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~ 127 (251)
T d1vl8a_ 54 GVETMAFRCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS 127 (251)
T ss_dssp CCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhh
Confidence 356888999999874 33333 2378999999997542 135566799999999999988754
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+-.++|++||..+... |......|..+|..-+.+.+.+
T Consensus 128 ~m~~~~~G~Ii~i~S~~~~~~-----------~~~~~~~Y~asKaal~~lt~~l 170 (251)
T d1vl8a_ 128 LLRESDNPSIINIGSLTVEEV-----------TMPNISAYAASKGGVASLTKAL 170 (251)
T ss_dssp HHTTCSSCEEEEECCGGGTCC-----------CSSSCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhccc-----------cCccccchHHHHHhHHHHHHHH
Confidence 2 12358999988643210 1112345677776666555443
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.04 E-value=0.001 Score=59.44 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=65.5
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh---h----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF---D----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~---~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++..+.+|++|++ +.+.+ ..++|++||+||.... . +.++..+++|+.|+..+.+++..
T Consensus 51 g~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~ 124 (247)
T d2ew8a1 51 GRRVLTVKCDVSQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP 124 (247)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHh
Confidence 357889999999974 33333 2478999999997542 1 45567799999999999987753
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+ -.++|++||..+... .| ....|..+|..-+.+.+.
T Consensus 125 ~m~~~~-~G~Iv~isS~~~~~~----------~~--~~~~Y~asKaal~~ltk~ 165 (247)
T d2ew8a1 125 GMKRNG-WGRIINLTSTTYWLK----------IE--AYTHYISTKAANIGFTRA 165 (247)
T ss_dssp HHHHHT-CEEEEEECCGGGGSC----------CS--SCHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CCCccccccchhccc----------Cc--ccccchhhhccHHHHHHH
Confidence 23 468999999765311 11 234566666665555443
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.03 E-value=0.00066 Score=60.58 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=66.6
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++.++.+|++|++ +.+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+++..
T Consensus 51 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 124 (244)
T d1edoa_ 51 GQAITFGGDVSKEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 57889999999973 33333 2378999999987542 145567799999999999888754
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+.-. .| ....|..+|..-+.+.+.+
T Consensus 125 m~~~~-~G~IVnisS~~~~~~----------~~--~~~~Y~asKaal~~ltk~l 165 (244)
T d1edoa_ 125 MMKKR-KGRIINIASVVGLIG----------NI--GQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp HHHHT-CEEEEEECCTHHHHC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEEcChhhcCC----------CC--CCHHHHHHHHHHHHChHHH
Confidence 23 468999999865311 11 2346777777666665543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.03 E-value=0.00083 Score=60.27 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=65.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..+..++.+|+++++ +.+.+ ..++|++||+||.... .++++..+++|+.|+..+.+++..
T Consensus 51 ~~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~ 124 (253)
T d1hxha_ 51 GERSMFVRHDVSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIA 124 (253)
T ss_dssp CTTEEEECCCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCeEEEEeecCCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 356788999999873 32332 2478999999997542 145567799999999998888754
Q ss_pred c--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 M--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
. .+-.++|++||.++.. |......|..+|..-+.+.+.
T Consensus 125 ~m~~~~G~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~ 164 (253)
T d1hxha_ 125 AMKETGGSIINMASVSSWL------------PIEQYAGYSASKAAVSALTRA 164 (253)
T ss_dssp HHTTTCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCceecccchhhhc------------CccccccccchhHHHHHHHHH
Confidence 2 1136899999976531 122234677777666655543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.02 E-value=0.00078 Score=60.60 Aligned_cols=98 Identities=9% Similarity=0.017 Sum_probs=66.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +.+.+. .++|++||+||.... .+.++..+++|+.|+.++.+++..
T Consensus 54 g~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 127 (260)
T d1x1ta1 54 GVKVLYDGADLSKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALP 127 (260)
T ss_dssp TSCEEEECCCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhh
Confidence 357889999999974 333332 468999999997541 145567799999999988887653
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+... ......|..+|..-+.+.+.+
T Consensus 128 ~m~~~~-~G~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 169 (260)
T d1x1ta1 128 HMKKQG-FGRIINIASAHGLVA------------SANKSAYVAAKHGVVGFTKVT 169 (260)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred hHhhcC-CceEeecccccceec------------cCCcchhhhhhhhHHHhHHHH
Confidence 23 358999999865321 112346777777666665543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.00 E-value=0.00088 Score=59.92 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=64.3
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc--
Q psy16526 307 IKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM-- 370 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 370 (422)
..++++|++|++ +.+++ ..++|++||+||.... .++++..+++|+.|+.++.+++...
T Consensus 50 ~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 123 (248)
T d2d1ya1 50 GAFFQVDLEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR 123 (248)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccc
Confidence 467899999873 32332 2478999999997542 1345667999999999999888642
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+... ......|..+|..-+.+.+.+
T Consensus 124 ~~~~G~Ii~isS~~~~~~------------~~~~~~Y~asKaal~~ltk~l 162 (248)
T d2d1ya1 124 KVGGGAIVNVASVQGLFA------------EQENAAYNASKGGLVNLTRSL 162 (248)
T ss_dssp TTTCEEEEEECCGGGTSB------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccc------------ccccchhHHHHHHHHHHHHHH
Confidence 12468999999765321 112446777777666655443
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.95 E-value=0.0017 Score=58.40 Aligned_cols=98 Identities=14% Similarity=0.059 Sum_probs=65.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++..+.+|++|++ +.+++. .++|++||+||.... .+.++..+++|+.|+..+.+++..
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (261)
T d1geea_ 57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhh
Confidence 46788999999974 333332 378999999997642 134566799999999998887643
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.-..+|++||..+.. |...+..|..+|..-+.+.+.+
T Consensus 131 m~~~~~g~~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~l 172 (261)
T d1geea_ 131 FVENDIKGTVINMSSVHEKI------------PWPLFVHYAASKGGMKLMTETL 172 (261)
T ss_dssp HHHTTCCCEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccchhcc------------cCccccccccCCccchhhHHHH
Confidence 33234588899876531 1112346777777666655543
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.92 E-value=0.0014 Score=58.82 Aligned_cols=98 Identities=12% Similarity=0.045 Sum_probs=65.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+ ..++|++||+||.... .+.+++.+++|+.|+.++.+++...
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 124 (257)
T d2rhca1 51 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 124 (257)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHH
Confidence 46889999999974 33333 2368999999997542 1345677999999999999988542
Q ss_pred -----CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -----THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -----~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|.+||..+... ......|..+|..-+.+.+.+
T Consensus 125 ~~~~~~~~g~Ii~i~S~~~~~~------------~~~~~~Y~asKaal~~ltk~l 167 (257)
T d2rhca1 125 GGMLERGTGRIVNIASTGGKQG------------VVHAAPYSASKHGVVGFTKAL 167 (257)
T ss_dssp TSHHHHTEEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcccccccccccccc------------cccchhHHHHHHHHHHHHHHH
Confidence 12357999988755311 112345777776665555443
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.91 E-value=0.0016 Score=58.29 Aligned_cols=97 Identities=12% Similarity=0.027 Sum_probs=64.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++.+|++|++ +.+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+++..
T Consensus 53 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~ 126 (251)
T d1zk4a1 53 PDQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQ 126 (251)
T ss_dssp TTTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHH
Confidence 357899999999974 22332 2478999999987531 144566799999999999988753
Q ss_pred ----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 370 ----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 370 ----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
.+.-.++|++||..+.-. .| ....|..+|..-+.+.+
T Consensus 127 ~m~~~~~gg~Ii~isS~~~~~~----------~~--~~~~Y~asKaal~~lt~ 167 (251)
T d1zk4a1 127 RMKNKGLGASIINMSSIEGFVG----------DP--SLGAYNASKGAVRIMSK 167 (251)
T ss_dssp HHTTSSSCEEEEEECCGGGTSC----------CT--TCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCceEeeeccceecc----------CC--CchhHHHHHHHHhcchH
Confidence 221247899999765311 11 13466677766555544
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.89 E-value=0.00062 Score=61.01 Aligned_cols=73 Identities=30% Similarity=0.393 Sum_probs=55.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc------CccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhcC
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ------NVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEMT 371 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~------~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~ 371 (422)
.++.++.+|++|++ +.+.+.+ ++|.|+|+|+..... +..+..+++|+.|+.++.++.+..+
T Consensus 62 ~~v~~~~~Dv~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~ 135 (259)
T d2fr1a1 62 ARTTVAACDVTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD 135 (259)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred ccccccccccchHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC
Confidence 57899999999973 3344432 478999999976421 2344568899999999999887765
Q ss_pred CCceEEEEeCCcc
Q psy16526 372 HLEALIHVSTAYC 384 (422)
Q Consensus 372 ~~~r~v~~SS~~~ 384 (422)
..++|++||..+
T Consensus 136 -~~~iv~~SS~a~ 147 (259)
T d2fr1a1 136 -LTAFVLFSSFAS 147 (259)
T ss_dssp -CSEEEEEEEHHH
T ss_pred -CceEeeecchhh
Confidence 678999999754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0026 Score=57.02 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=66.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH-- 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-- 368 (422)
.++.++.+|+++++ +.+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+++.
T Consensus 61 ~~~~~~~~Dls~~~------~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 134 (257)
T d1xg5a_ 61 GTLIPYRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 134 (257)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 47889999999973 33332 2478999999987542 24556679999999988877763
Q ss_pred --hcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 --EMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 --~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.+ +-.++|++||.++... .|......|..+|..-+.+.+.+
T Consensus 135 ~~~~~~~~g~Ii~isS~~~~~~----------~p~~~~~~Y~~sKaal~~ltr~l 179 (257)
T d1xg5a_ 135 MKERNVDDGHIININSMSGHRV----------LPLSVTHFYSATKYAVTALTEGL 179 (257)
T ss_dssp HHHTTCCSCEEEEECCGGGTSC----------CSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCceEEEechHhcCC----------CCCcccHHHHHHHHHHHhCHHHH
Confidence 222 2358999999765311 23334456777777666665443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0018 Score=57.95 Aligned_cols=98 Identities=11% Similarity=0.082 Sum_probs=65.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
.++.++++|+++++ +.+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 60 ~~~~~~~~Dvs~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m 133 (255)
T d1fmca_ 60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 46888999999974 32332 2478999999997541 2455667999999999998876542
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+... ......|..+|..-+.+.+.+
T Consensus 134 ~~~~~g~Ii~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 173 (255)
T d1fmca_ 134 EKNGGGVILTITSMAAENK------------NINMTSYASSKAAASHLVRNM 173 (255)
T ss_dssp HHHTCEEEEEECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhcc------------ccccccchhHHHHHHHHHHHH
Confidence 11357899998755321 112346777777666655543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.82 E-value=0.0012 Score=59.10 Aligned_cols=97 Identities=11% Similarity=0.086 Sum_probs=66.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++..+.+|++|++ +.+.+. .++|++||.|+.... .+.++..+++|+.|+..+.+++..
T Consensus 59 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 132 (251)
T d2c07a1 59 YESSGYAGDVSKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 132 (251)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcc
Confidence 46889999999973 333332 378999999987542 145667799999999999887653
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||.++... .| ....|..+|..-+.+.+.+
T Consensus 133 m~~~~-~G~IVnisS~~~~~~----------~~--~~~~Y~asKaal~~ltr~l 173 (251)
T d2c07a1 133 MINNR-YGRIINISSIVGLTG----------NV--GQANYSSSKAGVIGFTKSL 173 (251)
T ss_dssp HHHHT-CEEEEEECCTHHHHC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred cccCC-CeEEEEECCHHhcCC----------CC--CCHHHHHHHHHHHHHHHHH
Confidence 23 468999999865421 11 1345677777666655543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.78 E-value=0.0023 Score=56.85 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=66.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhc---CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----c
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQ---NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----M 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~---~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~ 370 (422)
.++..+.+|++|++ +.+++.+ ++|++||+||.... .+.++..+++|+.|+..+.+++.. .
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 123 (242)
T d1cyda_ 50 PGIEPVCVDLGDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 123 (242)
T ss_dssp TTCEEEECCTTCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh
Confidence 45788899999873 4455544 67999999997542 134566799999999999887643 1
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+.-.++|++||..+.. +......|+.+|..-+.+.+.+
T Consensus 124 ~~~g~ii~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~l 161 (242)
T d1cyda_ 124 GVPGSIVNVSSMVAHV------------TFPNLITYSSTKGAMTMLTKAM 161 (242)
T ss_dssp TCCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred cccCcccccchhhccc------------cCCccccccchHHHHHHHHHHH
Confidence 2235899999875432 1112346777777766665544
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.78 E-value=0.0016 Score=58.40 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=65.4
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
..++..+.+|++|++ +.+.+ ..++|++||+||... +. +.++..+++|+.|+..+.+++.
T Consensus 54 ~~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~ 127 (258)
T d1iy8a_ 54 DAEVLTTVADVSDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVL 127 (258)
T ss_dssp TCCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEeccCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhH
Confidence 347889999999974 33333 247899999998642 22 3456679999999999998774
Q ss_pred hc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+-.++|++||..+.-. .| ....|..+|..-+.+.+.+
T Consensus 128 ~~m~~~~~G~Ii~isS~~~~~~----------~~--~~~~Y~asKaal~~lt~~l 170 (258)
T d1iy8a_ 128 KIMREQGSGMVVNTASVGGIRG----------IG--NQSGYAAAKHGVVGLTRNS 170 (258)
T ss_dssp HHHHHHTCCEEEEECCGGGTSB----------CS--SBHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhcCCCCcccccHhhccC----------CC--CchHHHHHHHHHHHHHHHH
Confidence 31 12458999999765311 11 2446666776655555443
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.74 E-value=0.0028 Score=56.77 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=65.1
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH---hc-CccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc--
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL---KQ-NVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM-- 370 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~---~~-~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 370 (422)
..++.++.+|++|++-. ++-++.+ .. .+|++||+||.... .+.++..+++|+.|+..+.+++...
T Consensus 56 g~~~~~~~~Dv~~~~~v--~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 133 (259)
T d2ae2a_ 56 GFKVEASVCDLSSRSER--QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK 133 (259)
T ss_dssp TCEEEEEECCTTCHHHH--HHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeeCCCHHHH--HHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhh
Confidence 35678899999987411 0011122 12 48999999997542 1345667999999999998877532
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.++|++||..+... .| ....|..+|..-+.+.+.+
T Consensus 134 ~~~~G~Ii~isS~~~~~~----------~~--~~~~Y~asKaal~~lt~~l 172 (259)
T d2ae2a_ 134 ASERGNVVFISSVSGALA----------VP--YEAVYGATKGAMDQLTRCL 172 (259)
T ss_dssp HTSSEEEEEECCGGGTSC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred hhcccccccccccccccc----------cc--cccchHHHHHHHHHHHHHH
Confidence 22468999999765311 11 2345666776666555443
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=96.68 E-value=0.0012 Score=59.84 Aligned_cols=93 Identities=16% Similarity=0.033 Sum_probs=64.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.||++|. +.+.....+++.++|+++... ...|..++.+++++|++.+ ..++++.||..+
T Consensus 54 ~~v~~v~~d~~d~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~ 118 (312)
T d1qyda_ 54 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGV--------LSHHILEQLKLVEAIKEAG-NIKRFLPSEFGM 118 (312)
T ss_dssp TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSS--------SSTTTTTHHHHHHHHHHSC-CCSEEECSCCSS
T ss_pred CCcEEEEeecccc------hhhhhhccCcchhhhhhhhcc--------cccchhhhhHHHHHHHHhc-CCcEEEEeeccc
Confidence 5689999999987 456778889999999997643 2457888999999999987 667777877544
Q ss_pred ccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 385 NCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 385 ~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+.. + ..|..|...+...|...|+....
T Consensus 119 ~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~ 146 (312)
T d1qyda_ 119 DPDI----M---EHALQPGSITFIDKRKVRRAIEA 146 (312)
T ss_dssp CTTS----C---CCCCSSTTHHHHHHHHHHHHHHH
T ss_pred cCCC----c---ccccchhhhhhHHHHHHHHhhcc
Confidence 3221 1 23444555566666666665543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.67 E-value=0.0025 Score=57.13 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=65.7
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.++..+.+|+++++ +.+.+ ..++|++||+||... +. +.++..+++|+.|+..+.+++..
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 127 (260)
T d1zema1 54 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 127 (260)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHh
Confidence 46889999999874 22322 247899999998653 21 34556799999999999888753
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+-.++|++||..+... .| -+..|..+|..-+.+.+.+
T Consensus 128 ~m~~~~~G~II~isS~~~~~~----------~~--~~~~Y~asKaal~~ltk~l 169 (260)
T d1zema1 128 QMITQNYGRIVNTASMAGVKG----------PP--NMAAYGTSKGAIIALTETA 169 (260)
T ss_dssp HHHHHTCEEEEEECCHHHHSC----------CT--TBHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCeeechhhccC----------Cc--chHHHHHHHHHHHHHHHHH
Confidence 1 12468999999765321 11 2346777777666665543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.003 Score=56.05 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=66.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh---cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh-c---
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK---QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE-M--- 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~---~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--- 370 (422)
+++..+.+|++|++ +.+++. .++|++||+|+..... +.++..+++|+.|+..+.+++.. .
T Consensus 52 ~~~~~~~~Dv~d~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 125 (244)
T d1pr9a_ 52 PGIEPVCVDLGDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125 (244)
T ss_dssp TTCEEEECCTTCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHH------HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh
Confidence 35778899999873 445554 3689999999876421 44566799999999998887643 1
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++-.++|++||.++.. +......|..+|..-+.+.+.+
T Consensus 126 ~~~g~Ii~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~l 163 (244)
T d1pr9a_ 126 GVPGAIVNVSSQCSQR------------AVTNHSVYCSTKGALDMLTKVM 163 (244)
T ss_dssp TCCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred CCcceEeecccccccc------------cccchhhhhhhHHHHHHHHHHH
Confidence 2246899999976532 1112346777777666665543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.65 E-value=0.003 Score=57.43 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=66.7
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-----cCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh--
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-----QNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE-- 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-----~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~-- 369 (422)
..++..+.+|++|++ +.+.+. ..+|+++|.|+..... +.++..+++|+.|+.++.+++..
T Consensus 56 ~~~~~~~~~Dv~~~~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m 129 (285)
T d1jtva_ 56 PGSLETLQLDVRDSK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM 129 (285)
T ss_dssp TTSEEEEECCTTCHH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEeccccchH------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHH
Confidence 457899999999973 334433 3579999999875421 34556799999999999887643
Q ss_pred --cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 --MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 --~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+ -.++|++||..+... .| ....|..+|..-+.+.+.+
T Consensus 130 ~~~~-~G~Iv~isS~~g~~~----------~~--~~~~Y~asKaal~~l~~~l 169 (285)
T d1jtva_ 130 KRRG-SGRVLVTGSVGGLMG----------LP--FNDVYCASKFALEGLCESL 169 (285)
T ss_dssp HHHT-CEEEEEEEEGGGTSC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHcC-CCceEEEechhhcCC----------CC--CchHHHHHHHHHHHHHHHH
Confidence 33 468999999765311 12 2346777777666665543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.62 E-value=0.0032 Score=55.82 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=62.3
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc-
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM- 370 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 370 (422)
+.+.+.+|++|++ +.+++ ..++|++||+||.... .+.++..+++|+.|+..+.+++...
T Consensus 50 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m 123 (242)
T d1ulsa_ 50 GAHPVVMDVADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAM 123 (242)
T ss_dssp TCEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccc
Confidence 4678899999874 33333 2368999999997542 1345677999999999999887642
Q ss_pred --CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 --THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 --~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-..++.+||+...+. | ....|..+|..-+.+.+.+
T Consensus 124 ~~~~~~~i~~~ss~~~~~~-----------~--~~~~Y~asKaal~~ltk~l 162 (242)
T d1ulsa_ 124 REKNPGSIVLTASRVYLGN-----------L--GQANYAASMAGVVGLTRTL 162 (242)
T ss_dssp TTTCCEEEEEECCGGGGCC-----------T--TCHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeeccccccCC-----------C--CCcchHHHHHHHHHHHHHH
Confidence 22356677776432211 1 2346777777666665543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.52 E-value=0.0012 Score=57.13 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=57.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh----------------hhHHHHHHhhHHHHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD----------------EALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~----------------~~~~~~~~~Nv~gt~~ll~~a 367 (422)
..+++++.+|++++ +++.++++++|+|||+|+..... .......++|+.|++++++.+
T Consensus 46 ~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (252)
T d2q46a1 46 GGEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 119 (252)
T ss_dssp TCCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH
T ss_pred cCCcEEEEeeeccc------cccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc
Confidence 35778999999887 45678889999999999865321 111234678999999999999
Q ss_pred HhcCCCceEEEEeCCccc
Q psy16526 368 HEMTHLEALIHVSTAYCN 385 (422)
Q Consensus 368 ~~~~~~~r~v~~SS~~~~ 385 (422)
.... .+...+.|+....
T Consensus 120 ~~~~-~~~~~~~s~~~~~ 136 (252)
T d2q46a1 120 KVAG-VKHIVVVGSMGGT 136 (252)
T ss_dssp HHHT-CSEEEEEEETTTT
T ss_pred cccc-ccccccccccccC
Confidence 9876 7888888876544
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.0017 Score=58.03 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=63.9
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
.+..++.+|++|++ +.+++ ..++|++||+||... +. +.++..+++|+.|+.++.+++..
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p 124 (250)
T d1ydea1 51 PGAVFILCDVTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 124 (250)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCeEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhH
Confidence 45788999999974 33333 236899999998642 21 34566799999999999888764
Q ss_pred c--CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 370 M--THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 370 ~--~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
. .+-.++|++||.++... ......|..+|..-+.+.+.
T Consensus 125 ~m~~~~G~Ii~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~ 164 (250)
T d1ydea1 125 YLRKSQGNVINISSLVGAIG------------QAQAVPYVATKGAVTAMTKA 164 (250)
T ss_dssp HHHHHTCEEEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCccccccccccc------------ccCcchhHHHHhhHHHHHHH
Confidence 2 01148999999765321 11234666677665555544
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0031 Score=56.32 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=64.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc------
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM------ 370 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~------ 370 (422)
..++.++.+|+++++ +.+.+. .++|++||+|+... ..++++.+++|+.|+.++..++...
T Consensus 53 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~ 125 (254)
T d2gdza1 53 PQKTLFIQCDVADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNG 125 (254)
T ss_dssp GGGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred CCcEEEEEeecCCHH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhc
Confidence 357889999999973 333332 47899999999865 3467778899999988887777532
Q ss_pred CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhh
Q psy16526 371 THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVN 418 (422)
Q Consensus 371 ~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~ 418 (422)
+.-.++|++||..+.- |......|..+|..-+.+.+
T Consensus 126 ~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~ltr 161 (254)
T d2gdza1 126 GEGGIIINMSSLAGLM------------PVAQQPVYCASKHGIVGFTR 161 (254)
T ss_dssp CCCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEeeccHhhcc------------CCCCccchHHHHHHHHHHHH
Confidence 1124699999976531 11123457777766555543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.45 E-value=0.0034 Score=55.61 Aligned_cols=98 Identities=15% Similarity=0.090 Sum_probs=64.3
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..++.++++|+++++ +.+++ ..++|++||+|+..... +.+++.+++|+.++..+.+++..
T Consensus 50 ~~~~~~~~~Dls~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~ 123 (241)
T d2a4ka1 50 EAEAIAVVADVSDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE 123 (241)
T ss_dssp CSSEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhcccccccccccccccccccccccc
Confidence 467889999999874 33332 24689999999875421 34456799999999999998765
Q ss_pred cCCC-ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 MTHL-EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~~~~-~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.-.- +.++.+||.+.. +...+..|+.+|..-|.+.+.+
T Consensus 124 ~~~~~~~i~~~ss~a~~-------------~~~~~~~Y~~sK~al~~lt~~l 162 (241)
T d2a4ka1 124 VLEEGGSLVLTGSVAGL-------------GAFGLAHYAAGKLGVVGLARTL 162 (241)
T ss_dssp HCCTTCEEEEECCCTTC-------------CHHHHHHHHHCSSHHHHHHHHH
T ss_pred ccccccceeeccccccc-------------cccCccccchhhHHHHHHHHHH
Confidence 4222 344444443321 1112456888888877777655
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=96.42 E-value=0.0052 Score=55.17 Aligned_cols=99 Identities=14% Similarity=0.185 Sum_probs=64.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++.++.+|++|++ +.+.+. .++|++||+||... +. +.++..+++|+.|+..+.+++.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~ 127 (268)
T d2bgka1 54 DVISFVHCDVTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127 (268)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhc
Confidence 45788999999873 333332 37899999998643 11 3455678999999999988875
Q ss_pred hc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+-.++|++||..+.... .+. ...|..+|..-+.+.+.+
T Consensus 128 ~~m~~~~~g~ii~iss~~~~~~~---------~~~--~~~Y~asKaal~~lt~~l 171 (268)
T d2bgka1 128 RVMIPAKKGSIVFTASISSFTAG---------EGV--SHVYTATKHAVLGLTTSL 171 (268)
T ss_dssp HHHGGGTCEEEEEECCGGGTCCC---------TTS--CHHHHHHHHHHHHHHHHH
T ss_pred chHhhcCCCCccccccccccccc---------ccc--ccccchhHHHHHhCHHHH
Confidence 32 124589999887543211 111 125666776666655543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.41 E-value=0.0045 Score=55.22 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=66.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhc------CCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEM------THLE 374 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~~ 374 (422)
..++.++..|++.+.-.+ .+-++.+ ..++|++||+||... .++++..+++|+.|+.++..++... +...
T Consensus 54 ~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g 131 (254)
T d1sbya1 54 KVNITFHTYDVTVPVAES-KKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGG 131 (254)
T ss_dssp TSEEEEEECCTTSCHHHH-HHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred CCCEEEEEeecCCCHHHH-HHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCc
Confidence 357889999998542000 0111112 347899999999765 4578888999999999998877641 1235
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
++|++||..+.. |......|+.+|..-..+.+.
T Consensus 132 ~Ii~isS~~~~~------------~~~~~~~Y~asKaal~~~t~~ 164 (254)
T d1sbya1 132 IIANICSVTGFN------------AIHQVPVYSASKAAVVSFTNS 164 (254)
T ss_dssp EEEEECCGGGTS------------CCTTSHHHHHHHHHHHHHHHH
T ss_pred eEEEEechhhcc------------CCCCCHHHHHHHHHHHHHHHH
Confidence 799999976531 122244677777665555443
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.35 E-value=0.0073 Score=53.47 Aligned_cols=112 Identities=11% Similarity=0.049 Sum_probs=64.3
Q ss_pred ccCcCcEEEEeCcCCCCCCCCCHHH-HHHH---h--cCccEEEEcccccCh--------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 301 SNELAKIKPILGDITEPELGISQND-QKIL---K--QNVSVVFHSAATVKF--------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 301 ~~~~~~v~~v~gDl~~~~~~l~~~~-~~~~---~--~~~d~ViH~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.....++.++.+|+++++-. ++ .+.+ . .++|++||+||.... .+.+++.+++|+.|+..+.++
T Consensus 47 ~~~~~~~~~~~~Dvs~~~~v---~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 123 (250)
T d1yo6a1 47 SIKDSRVHVLPLTVTCDKSL---DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQK 123 (250)
T ss_dssp TCCCTTEEEEECCTTCHHHH---HHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HhhCCceEEEEEecCCHHHH---HHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHH
Confidence 34456899999999987411 11 1111 1 248999999996421 133556799999999998877
Q ss_pred HHhc------C--------CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM------T--------HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~------~--------~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... + ...+++.+|+..+.-.. .. ...+..+...|+.+|.....+.+.+
T Consensus 124 ~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~-~~----~~~~~~~~~aY~aSKaal~~l~~~l 186 (250)
T d1yo6a1 124 LLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD-NT----SGSAQFPVLAYRMSKAAINMFGRTL 186 (250)
T ss_dssp THHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT-CC----STTSSSCBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCccccceeccccccccccccccC-Cc----ccccchhHHHHHHHHHHHHHHHHHH
Confidence 6421 0 01345666654322111 01 1123334556888887766665543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=96.34 E-value=0.0036 Score=56.63 Aligned_cols=97 Identities=19% Similarity=0.177 Sum_probs=63.0
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh------------hhHHHHHHhhHHHHHHHH
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD------------EALKLSVTINMLGTKRLV 364 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll 364 (422)
..++..+.+|+++++ +.+.+ ..++|+++|+||..... +.+++.+++|+.|+..+.
T Consensus 50 ~~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~ 123 (276)
T d1bdba_ 50 GDNVLGIVGDVRSLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAV 123 (276)
T ss_dssp GGGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHH
T ss_pred CCCeeEEecccccHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHH
Confidence 357889999999873 22332 24789999999864311 125667999999999988
Q ss_pred HHHHh----cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 365 ELCHE----MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 365 ~~a~~----~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+++.. .+ .++|++||..+.-. .| ....|..+|..-+.+.+.+
T Consensus 124 ~~~~p~m~~~~--g~iI~i~S~~~~~~----------~~--~~~~Y~asKaal~~ltr~l 169 (276)
T d1bdba_ 124 KACLPALVASR--GNVIFTISNAGFYP----------NG--GGPLYTAAKHAIVGLVREL 169 (276)
T ss_dssp HHHHHHHHHHT--CEEEEECCGGGTST----------TS--SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC--CCceeeeechhccC----------CC--CCchHHHHHHHHHHHHHHH
Confidence 87743 22 47888888654211 11 1345777776666555443
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.26 E-value=0.0058 Score=54.65 Aligned_cols=78 Identities=10% Similarity=0.150 Sum_probs=49.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH---h-cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL---K-QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE---- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~---~-~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---- 369 (422)
.++..+.+|+++++-. ++-++.+ . ..+|+++|+||.... .++++..+++|+.|+..+.+++..
T Consensus 57 ~~~~~~~~Dv~~~~~v--~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 134 (259)
T d1xq1a_ 57 FQVTGSVCDASLRPER--EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 134 (259)
T ss_dssp CCEEEEECCTTSHHHH--HHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeccCCCHHHH--HHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc
Confidence 4688999999987411 0111122 1 248999999997542 145567799999999999887753
Q ss_pred cCCCceEEEEeCCccc
Q psy16526 370 MTHLEALIHVSTAYCN 385 (422)
Q Consensus 370 ~~~~~r~v~~SS~~~~ 385 (422)
.+ -.++|++||..+.
T Consensus 135 ~~-~G~Iv~isS~~~~ 149 (259)
T d1xq1a_ 135 SG-CGNIIFMSSIAGV 149 (259)
T ss_dssp HS-SCEEEEEC-----
T ss_pred cc-ccccccccccccc
Confidence 23 4689999997653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.22 E-value=0.0096 Score=52.60 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=63.2
Q ss_pred CcEEEEeCcCCCCCCCCCHHH-HHH---H--hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQND-QKI---L--KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~-~~~---~--~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++-. +. .+. . ..++|++||.||... .. +..++.+++|+.|+..+.+++...
T Consensus 53 ~~~~~~~~Dvs~~~~v---~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~ 129 (248)
T d1snya_ 53 SNIHILEIDLRNFDAY---DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL 129 (248)
T ss_dssp TTEEEEECCTTCGGGH---HHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEEEeccHHHH---HHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHH
Confidence 5789999999997521 11 121 1 136899999998743 11 234567899999999988876421
Q ss_pred --------------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 371 --------------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 371 --------------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.+-.++|.+||..+.-. ..|......|+.+|..-..+.+.
T Consensus 130 l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~---------~~~~~~~~~Y~aSKaal~~lt~~ 183 (248)
T d1snya_ 130 LKKAAKANESQPMGVGRAAIINMSSILGSIQ---------GNTDGGMYAYRTSKSALNAATKS 183 (248)
T ss_dssp HHHHHHHTTTSCSSTTTCEEEEECCGGGCST---------TCCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccccccccccccccccC---------CCCCCChHHHHHHHHHHHHHHHH
Confidence 01357899988654211 12222344677777665555443
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.20 E-value=0.0097 Score=54.29 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=63.5
Q ss_pred CcCcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16526 303 ELAKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 303 ~~~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
...++..+.+|++|++ +.+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+++.
T Consensus 64 ~~~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~ 137 (297)
T d1yxma1 64 KQARVIPIQCNIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVY 137 (297)
T ss_dssp CCCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cCceEEEEeccCCCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHH
Confidence 3457899999999974 33332 2478999999986531 14556679999999999998876
Q ss_pred hc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 369 EM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 369 ~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.. .+-.++|.+||+...+. | ....|..+|..-+.+.+.+
T Consensus 138 ~~m~~~~~g~Ii~~ss~~~~~~-----------~--~~~~Y~asKaal~~ltk~l 179 (297)
T d1yxma1 138 SSWMKEHGGSIVNIIVPTKAGF-----------P--LAVHSGAARAGVYNLTKSL 179 (297)
T ss_dssp HHTHHHHCEEEEEECCCCTTCC-----------T--TCHHHHHHHHHHHHHHHHH
T ss_pred Hhhccccccccccccccccccc-----------c--ccccchhHHHHHHHHHHHH
Confidence 42 11356777766432211 1 1345666676666555443
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=96.15 E-value=0.0069 Score=54.11 Aligned_cols=98 Identities=9% Similarity=0.151 Sum_probs=65.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------h-cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------K-QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~-~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
..+.++.+|+++++ +.+++ . ..+|+++|+|+.... .++++..+++|+.|+..+.+++..
T Consensus 55 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~ 128 (258)
T d1ae1a_ 55 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 128 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeecCCHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccc
Confidence 56788899999874 22222 2 247999999987642 245667799999999999887753
Q ss_pred c---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. ++..++|++||..+... ......|..+|..-+.+.+.+
T Consensus 129 ~m~~~~~g~ii~isS~~~~~~------------~~~~~~Y~~sK~al~~lt~~l 170 (258)
T d1ae1a_ 129 LLKASQNGNVIFLSSIAGFSA------------LPSVSLYSASKGAINQMTKSL 170 (258)
T ss_dssp HHHHHTSEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccc------------cccchhHHHHHHHHHHHHHHH
Confidence 2 12568999999765321 112345666676666655543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.12 E-value=0.011 Score=52.64 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=66.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh----c-------CccEEEEcccccC------hh----hhHHHHHHhhHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK----Q-------NVSVVFHSAATVK------FD----EALKLSVTINMLGTKRL 363 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~----~-------~~d~ViH~Aa~~~------~~----~~~~~~~~~Nv~gt~~l 363 (422)
.++.++.+|+++++ +.+++. + ..|+++|.||... +. +.++..+++|+.|+..+
T Consensus 60 ~~~~~~~~Dvs~~~------~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l 133 (259)
T d1oaaa_ 60 LKVVLAAADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCL 133 (259)
T ss_dssp SEEEEEECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHH
Confidence 47899999999973 333332 1 4579999998642 11 34566799999999999
Q ss_pred HHHHHhc----C-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 364 VELCHEM----T-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 364 l~~a~~~----~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+++... + .-.++|++||..+.. |...+..|..+|..-+.+.+.+
T Consensus 134 ~~~~~~~m~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~l 183 (259)
T d1oaaa_ 134 TSGTLNAFQDSPGLSKTVVNISSLCALQ------------PYKGWGLYCAGKAARDMLYQVL 183 (259)
T ss_dssp HHHHHHTSCCCTTCEEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcccccccccccccC------------CCccchHHHHHHHHHHHHHHHH
Confidence 9988653 1 124799999875531 2223467888888777666554
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.05 E-value=0.0066 Score=54.35 Aligned_cols=98 Identities=10% Similarity=0.136 Sum_probs=59.4
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-----------hhhHHHHHHhhHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-----------DEALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++.++.+|+++++ +.+++. .++|++||+||.... .+.++..+++|+.|+..+.++
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~ 130 (264)
T d1spxa_ 57 QNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK 130 (264)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhh
Confidence 56899999999874 333332 378999999986421 134556789999999998888
Q ss_pred HHhc--CCCceEEEEeCCc-cccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM--THLEALIHVSTAY-CNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~--~~~~r~v~~SS~~-~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... .+-.++|.++|+. +.. +.| ....|..+|..-+.+.+.+
T Consensus 131 ~~p~m~~~~g~iI~~~S~~~~~~----------~~~--~~~~Y~asKaal~~lt~~l 175 (264)
T d1spxa_ 131 AVPHLSSTKGEIVNISSIASGLH----------ATP--DFPYYSIAKAAIDQYTRNT 175 (264)
T ss_dssp HHHHHHHHTCEEEEECCTTSSSS----------CCT--TSHHHHHHHHHHHHHHHHH
T ss_pred hCCccccccCcceeeeeeccccc----------cCC--CchhhhhhhhhHHHHHHHH
Confidence 7642 1123566665543 221 111 1345777777666655543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.0049 Score=54.64 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=68.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc---CCCc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM---THLE 374 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~ 374 (422)
..++....|+.+.+.. +.......++|+++|+||..... +.++..+++|+.|+..+.+++... .+-.
T Consensus 50 ~~~~~~~~d~~~~~~~---~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g 126 (245)
T d2ag5a1 50 PGIQTRVLDVTKKKQI---DQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG 126 (245)
T ss_dssp TTEEEEECCTTCHHHH---HHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cCCceeeeeccccccc---cccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc
Confidence 4567777787664311 12223345789999999976521 345667999999999998877641 1246
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|++||..+. ..|...+..|+.+|..-+.+.+.+
T Consensus 127 ~Ii~isS~~~~-----------~~~~~~~~~Y~~sKaal~~l~r~l 161 (245)
T d2ag5a1 127 NIINMSSVASS-----------VKGVVNRCVYSTTKAAVIGLTKSV 161 (245)
T ss_dssp EEEEECCSBTT-----------TBCCTTBHHHHHHHHHHHHHHHHH
T ss_pred eeeeeechhhc-----------cCCccchhHHHHHHHHHHHHHHHH
Confidence 89999886531 124445677888888888777655
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.90 E-value=0.011 Score=53.18 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=62.3
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCH 368 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~ 368 (422)
.++..+.+|++|++ +.+.+ ..++|+++|+||... .. +.++..+++|+.|+..+.+++.
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~ 129 (274)
T d1xhla_ 56 EKINAVVADVTEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTK 129 (274)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cceEEEEeeCCCHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccc
Confidence 57899999999974 33333 236899999998532 11 2356679999999999988876
Q ss_pred hc---CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 369 EM---THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 369 ~~---~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
.. ++-.+++++||..+.. +...+..|..+|..-+.+.+.
T Consensus 130 ~~m~~~~~g~ii~~ss~~~~~------------~~~~~~~Y~asKaal~~ltk~ 171 (274)
T d1xhla_ 130 EHLIKTKGEIVNVSSIVAGPQ------------AHSGYPYYACAKAALDQYTRC 171 (274)
T ss_dssp HHHHHTTCEEEEECCGGGSSS------------CCTTSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhhccc------------cCCCCceehhhhhHHHHHHHH
Confidence 42 2235677777654321 111234677777766655544
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.78 E-value=0.0095 Score=53.53 Aligned_cols=97 Identities=10% Similarity=0.147 Sum_probs=60.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh--------h---hhHHHHHHhhHHHHHHHHHH
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF--------D---EALKLSVTINMLGTKRLVEL 366 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~ 366 (422)
.++..+.+|++|++ +.+.+. .++|++||+||.... + +.++..+++|+.|+..+.++
T Consensus 57 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~ 130 (272)
T d1xkqa_ 57 KQVNSVVADVTTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKK 130 (272)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHh
Confidence 57899999999974 333332 378999999987531 1 13556689999999999888
Q ss_pred HHhc---CCCceEEEEeCC-ccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 367 CHEM---THLEALIHVSTA-YCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 367 a~~~---~~~~r~v~~SS~-~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
+... + -..+|.++|+ .+.. |..-...|+.+|..-+.+.+.+
T Consensus 131 ~~p~m~~~-~g~iI~~~Ss~a~~~------------~~~~~~~Y~asKaal~~ltk~l 175 (272)
T d1xkqa_ 131 VKPHLVAS-KGEIVNVSSIVAGPQ------------AQPDFLYYAIAKAALDQYTRST 175 (272)
T ss_dssp HHHHHHHH-TCEEEEECCGGGSSS------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred hccccccc-CCccccccchhcccc------------CCCCcchhhhHHHHHHHHHHHH
Confidence 7542 1 1345555553 3221 1112346777777666655543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.77 E-value=0.018 Score=50.44 Aligned_cols=95 Identities=11% Similarity=0.085 Sum_probs=60.6
Q ss_pred EEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cCCCce
Q psy16526 307 IKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MTHLEA 375 (422)
Q Consensus 307 v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~r 375 (422)
.+++.+|+++.- +...+...++|++||+||.... .+.++..+++|+.|+..+.+++.. .+ -.+
T Consensus 46 ~~~~~~Dv~~~~-----~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ 119 (234)
T d1o5ia_ 46 HRYVVCDLRKDL-----DLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGR 119 (234)
T ss_dssp SEEEECCTTTCH-----HHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred CcEEEcchHHHH-----HHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccc
Confidence 467789998741 2334445689999999986532 134566789999999888887643 23 458
Q ss_pred EEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhh
Q psy16526 376 LIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNT 419 (422)
Q Consensus 376 ~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~ 419 (422)
+|.+||..+.. |......|..+|..-+.+.+.
T Consensus 120 ii~i~S~~~~~------------~~~~~~~Y~asKaal~~ltk~ 151 (234)
T d1o5ia_ 120 IVAITSFSVIS------------PIENLYTSNSARMALTGFLKT 151 (234)
T ss_dssp EEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc------------cccccccchhHHHHHHHHHHH
Confidence 99998865431 122233555666655555443
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=95.57 E-value=0.015 Score=51.81 Aligned_cols=105 Identities=12% Similarity=0.075 Sum_probs=63.0
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHh-------cCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh-
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILK-------QNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE- 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~-------~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~- 369 (422)
.++..+.+|+++++ +.+++. .++|++||+|+.... .+.+++.+++|+.|+.++.+++..
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (260)
T d1h5qa_ 59 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 132 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccc
Confidence 56889999999974 333332 368999999986531 134566799999999998877643
Q ss_pred ---cCCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 ---MTHLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ---~~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.-.+++..||........ .. ..+......|..+|..-+.+.+.+
T Consensus 133 m~~~~~~g~i~~~~s~~~~~~~~-~~----~~~~~~~~~Y~asKaal~~lt~~l 181 (260)
T d1h5qa_ 133 WLQKQQKGSIVVTSSMSSQIINQ-SS----LNGSLTQVFYNSSKAACSNLVKGL 181 (260)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCE-EE----TTEECSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEEeeccccccccc-cc----cccCccccchhhhhhhHHHHHHHH
Confidence 23234566666654332111 00 011112346777777666655443
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=95.47 E-value=0.0037 Score=58.46 Aligned_cols=95 Identities=14% Similarity=-0.002 Sum_probs=64.1
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccce-eeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGF-FRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~-lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
++|++|+||+.|.|....| -.........+.....|. .....++++..-|++-||=|+++++.++ .+
T Consensus 175 ~l~~~ilR~~~vyGp~~~~----~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~----~~---- 242 (357)
T d1db3a_ 175 GMYACNGILFNHESPRRGE----TFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML----QQ---- 242 (357)
T ss_dssp CCCEEEEEECCEECTTSCT----TSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT----SS----
T ss_pred CCCEEEEEeccccCCCCCc----CCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH----hC----
Confidence 6999999999998843211 100011122222222332 2345789999999999999999987765 11
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+...+||++++ .+.|+.++.+...+...
T Consensus 243 ---~~~~~yni~sg--~~~s~~~~~~~~~~~~g 270 (357)
T d1db3a_ 243 ---EQPEDFVIATG--VQYSVRQFVEMAAAQLG 270 (357)
T ss_dssp ---SSCCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred ---CCCCeEEECCC--CceehHHHHHHHHHHhC
Confidence 23468999998 57899999999888754
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=95.47 E-value=0.011 Score=54.40 Aligned_cols=107 Identities=11% Similarity=0.031 Sum_probs=72.9
Q ss_pred CCCEEEEccceeeeccCCCccccccCCC-CccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYN-GPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~-g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
++|+.|+||+.|.+....+.-|=.++.. ....++...-.|---.++++++..-|.+-||=+|.+++.+.-+...
T Consensus 167 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~----- 241 (342)
T d2blla1 167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN----- 241 (342)
T ss_dssp CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-----
T ss_pred CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccc-----
Confidence 7999999999999865443322221111 1222223333455566789999999999999999998877633221
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCC
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNP 122 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p 122 (422)
.....+||++++ .+++|+.++.+.+.+...+.+
T Consensus 242 --~~~g~~~Nig~~-~~~~t~~~l~~~i~~~~~~~~ 274 (342)
T d2blla1 242 --RCDGEIINIGNP-ENEASIEELGEMLLASFEKHP 274 (342)
T ss_dssp --TTTTEEEEECCT-TSEEEHHHHHHHHHHHHHTCT
T ss_pred --cCCCeEEEEecc-cchhHHHHHHHHHHHHhCCCc
Confidence 124579999874 467999999999888766544
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.45 E-value=0.034 Score=49.59 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=65.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|++ +.+.+ ..++|+++|.|+..... +.++..+++|+.|+..+.+++...
T Consensus 68 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 141 (272)
T d1g0oa_ 68 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 141 (272)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeeEeCCCCCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence 46889999999874 22222 24789999999876421 345567899999999999998752
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
..-.+.+.++|.++.. .+...+..|+.+|..-+.+.+.+
T Consensus 142 m~~~g~~i~i~s~~~~~-----------~~~~~~~~Y~asKaal~~ltk~l 181 (272)
T d1g0oa_ 142 LEIGGRLILMGSITGQA-----------KAVPKHAVYSGSKGAIETFARCM 181 (272)
T ss_dssp SCTTCEEEEECCGGGTC-----------SSCSSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccc-----------ccccchhhHHHHHHHHHHHHHHH
Confidence 2235778887765321 12223445667777666665543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.38 E-value=0.016 Score=51.48 Aligned_cols=99 Identities=12% Similarity=0.084 Sum_probs=64.1
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++..+.+|++|++ +.+.+ ..++|++||+||..... +.++..+++|+.|...+++++...
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (259)
T d1ja9a_ 56 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 129 (259)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEecCCCCCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence 46889999999874 22232 23689999999976421 345567999999999999888652
Q ss_pred -CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 371 -THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 371 -~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+-.+.+.++|.++. .. +..-+..|..+|..-+.+.+.+
T Consensus 130 m~~~g~~iii~s~~~~--~~---------~~~~~~~Y~asK~al~~l~r~l 169 (259)
T d1ja9a_ 130 CRRGGRIILTSSIAAV--MT---------GIPNHALYAGSKAAVEGFCRAF 169 (259)
T ss_dssp EEEEEEEEEECCGGGT--CC---------SCCSCHHHHHHHHHHHHHHHHH
T ss_pred hhcCCccccccccccc--cc---------CCCCchhHHHHHHHHHHHHHHH
Confidence 112456667665431 10 1112346777887777666554
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=95.20 E-value=0.015 Score=51.45 Aligned_cols=97 Identities=10% Similarity=0.078 Sum_probs=63.2
Q ss_pred cEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh--------h---hhHHHHHHhhHHHHHHHHHHH
Q psy16526 306 KIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF--------D---EALKLSVTINMLGTKRLVELC 367 (422)
Q Consensus 306 ~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a 367 (422)
+..++.+|++|++ +.+.+ ..++|++||+|+.... + +++...+++|+.++..+.+++
T Consensus 59 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 132 (256)
T d1ulua_ 59 GALLFRADVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (256)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccccccccCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHH
Confidence 4578899999973 33333 2468999999986431 1 234456899999999999887
Q ss_pred HhcC-CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 368 HEMT-HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 368 ~~~~-~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
...- +-.++|++||..+... ...+..|..+|..-+.+.+.+
T Consensus 133 ~~~~~~~G~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~ltr~l 174 (256)
T d1ulua_ 133 EPLLREGGGIVTLTYYASEKV------------VPKYNVMAIAKAALEASVRYL 174 (256)
T ss_dssp TTTEEEEEEEEEEECGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEeehHhcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 6431 1247999998765321 112446777777666665543
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=94.95 E-value=0.017 Score=52.67 Aligned_cols=94 Identities=13% Similarity=0.082 Sum_probs=67.5
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCc-cccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGP-TGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~-~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.|....| ++. ..++..+-.|---.++++++..-|.+-||=|+++++.++ .+
T Consensus 169 ~~~~~~~lR~~~vyGp~~~~--------~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~----~~--- 233 (322)
T d1r6da_ 169 YGLDVRITRCCNNYGPYQHP--------EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL----AG--- 233 (322)
T ss_dssp HCCCEEEEEECEEECTTCCT--------TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH----HH---
T ss_pred hCCCEEEEEeeeEECcCCCc--------CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHH----hC---
Confidence 47999999999999843221 122 222333334444446789999999999999999988876 22
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+....+||++++ +++++.++.+.+.+.+..
T Consensus 234 ---~~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~ 263 (322)
T d1r6da_ 234 ---GRAGEIYHIGGG--LELTNRELTGILLDSLGA 263 (322)
T ss_dssp ---CCTTCEEEECCC--CEEEHHHHHHHHHHHHTC
T ss_pred ---CCCCCeeEEeec--ccchhHHHHHHHHHHhCC
Confidence 123569999887 789999999988887653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=94.82 E-value=0.011 Score=53.00 Aligned_cols=96 Identities=16% Similarity=0.019 Sum_probs=66.6
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
..++|.+|+||+.+.+....+++.+.-...... --..++++++...+.|.+|=|+++++.++-+-.
T Consensus 146 ~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~----- 211 (312)
T d1qyda_ 146 AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR---------DKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ----- 211 (312)
T ss_dssp HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCS---------SEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-----
T ss_pred ccccceEEeccceeecCCccchhhHHHHhhhcc---------cccccccccccccceeeHHHHHHHHHHHhcCcc-----
Confidence 457999999999999876555554443332222 123457788999999999999999877762211
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+|+.+++ +++|++++.+.+.+...+
T Consensus 212 ---~~~~~~~~~~~~--~~~s~~e~~~~~~~~~g~ 241 (312)
T d1qyda_ 212 ---TLNKTMYIRPPM--NILSQKEVIQIWERLSEQ 241 (312)
T ss_dssp ---GSSSEEECCCGG--GEEEHHHHHHHHHHHHTC
T ss_pred ---ccCceEEEeCCC--cCCCHHHHHHHHHHHHCC
Confidence 112346777665 689999999999886543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.80 E-value=0.016 Score=52.70 Aligned_cols=97 Identities=11% Similarity=0.004 Sum_probs=67.0
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.|....+-.| .-...++.-+-.|---.++++++..-|++-||=|+.+++.+. ..
T Consensus 162 ~~~~~~~lR~~~vyGp~~~~~~~-----~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~----~~---- 228 (312)
T d2b69a1 162 EGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM----NS---- 228 (312)
T ss_dssp HCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH----TS----
T ss_pred hCCcEEEEEeeeEECCCCCCCCc-----cHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHH----hh----
Confidence 37999999999999854322111 001122222233433456789999999999999999987664 21
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcC
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQN 121 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~ 121 (422)
....+||++++ .++++.++.+.+.+.....
T Consensus 229 ---~~~~~~n~~~~--~~~~~~~~~~~i~~~~~~~ 258 (312)
T d2b69a1 229 ---NVSSPVNLGNP--EEHTILEFAQLIKNLVGSG 258 (312)
T ss_dssp ---SCCSCEEESCC--CEEEHHHHHHHHHHHHTCC
T ss_pred ---ccCCceEecCC--cccchhhHHHHHHHHhCCC
Confidence 23457999987 7899999999998876543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.67 E-value=0.021 Score=51.04 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=52.8
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHH-------hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKIL-------KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM 370 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~-------~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 370 (422)
.++.++.+|++|.+ +.+++ ..++|++||.||.... .+..+..+++|+.|+..+.+++...
T Consensus 53 ~~~~~~~~Dvs~~~------sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 126 (275)
T d1wmaa1 53 LSPRFHQLDIDDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 126 (275)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CcEEEEEEecCCHH------HHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999974 22222 2478999999997542 1344556899999999999998652
Q ss_pred -CCCceEEEEeCCcc
Q psy16526 371 -THLEALIHVSTAYC 384 (422)
Q Consensus 371 -~~~~r~v~~SS~~~ 384 (422)
..-.++|.+||..+
T Consensus 127 m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 127 IKPQGRVVNVSSIMS 141 (275)
T ss_dssp EEEEEEEEEECCHHH
T ss_pred HHhcCCcccccccce
Confidence 11248999999643
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.58 E-value=0.015 Score=53.84 Aligned_cols=98 Identities=8% Similarity=-0.058 Sum_probs=68.1
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
++|++|+||+.|.+....+...+ ..............+.-....++++..-|+|-|+-++.+++.++ ..
T Consensus 181 gl~~~ilR~~~vyG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~----~~----- 249 (363)
T d2c5aa1 181 GIECRIGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT----KS----- 249 (363)
T ss_dssp CCEEEEEEECCEECTTSCCSSSC--CCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH----HS-----
T ss_pred CCCEEEEEeeeEeccCCcccccc--cccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH----hC-----
Confidence 79999999999998654332222 11122223333344455567788888899999999999877664 21
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....+||++++ .++|+.++.+.+.+...+
T Consensus 250 --~~~~~~ni~~~--~~~s~~~l~~~i~~~~g~ 278 (363)
T d2c5aa1 250 --DFREPVNIGSD--EMVSMNEMAEMVLSFEEK 278 (363)
T ss_dssp --SCCSCEEECCC--CCEEHHHHHHHHHHTTTC
T ss_pred --CCCCeEEEecC--CcccHHHHHHHHHHHhCC
Confidence 23458999997 789999999999886553
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.48 E-value=0.024 Score=51.64 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=60.4
Q ss_pred EEeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHh----cCCCc
Q psy16526 309 PILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHE----MTHLE 374 (422)
Q Consensus 309 ~v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~ 374 (422)
...+|+++.+-. ++.++.+ ..++|++||+||.... .+.++..+++|+.|+.++.+++.. .+ -.
T Consensus 66 ~~~~d~~~~~~~--~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G 142 (302)
T d1gz6a_ 66 KAVANYDSVEAG--EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YG 142 (302)
T ss_dssp EEEEECCCGGGH--HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CE
T ss_pred ccccccchHHHH--HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-Cc
Confidence 445677765311 1112222 2378999999997642 135566799999999999988753 23 36
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|++||..+... .| ....|..+|..-+.+.+.+
T Consensus 143 ~IV~isS~~~~~~----------~~--~~~~Y~asKaal~~lt~~l 176 (302)
T d1gz6a_ 143 RIIMTASASGIYG----------NF--GQANYSAAKLGLLGLANTL 176 (302)
T ss_dssp EEEEECCHHHHHC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCChhhcCC----------CC--CcHHHHHHHHHHHHHHHHH
Confidence 8999999755311 11 1346677776665555443
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.23 E-value=0.031 Score=48.75 Aligned_cols=78 Identities=9% Similarity=-0.099 Sum_probs=53.3
Q ss_pred CccEEEEcccccC----h----hhhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCCccccCCCcccccccCCCCCH
Q psy16526 332 NVSVVFHSAATVK----F----DEALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPYDP 402 (422)
Q Consensus 332 ~~d~ViH~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p 402 (422)
++|++||+||... . .+.++..+++|+.|+.++.+++... ++-.++|++||..+.. |..-
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------~~~~ 138 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD------------GTPG 138 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------CCTT
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC------------CccC
Confidence 4899999998422 1 1334556899999999998888652 2235899999975431 2222
Q ss_pred HHHHHHHhhCCHHHhhhcC
Q psy16526 403 QKIIETMEWMDDSLVNTLT 421 (422)
Q Consensus 403 ~~~y~~~K~~~E~~~~~~~ 421 (422)
+..|+.+|..-+.+.+.++
T Consensus 139 ~~~Y~asKaal~~lt~~la 157 (236)
T d1dhra_ 139 MIGYGMAKGAVHQLCQSLA 157 (236)
T ss_dssp BHHHHHHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHHHH
Confidence 4578888887777776653
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=94.22 E-value=0.052 Score=49.80 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=49.6
Q ss_pred cCcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy16526 304 LAKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAY 383 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~ 383 (422)
.++++++.||++|+. +.+..+..++|.+++..... ...|+.++.+++++|++.+ ++++++.||..
T Consensus 48 ~~~v~~~~gD~~d~~-----~~~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~ 112 (350)
T d1xgka_ 48 IPNVTLFQGPLLNNV-----PLMDTLFEGAHLAFINTTSQ---------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMP 112 (350)
T ss_dssp STTEEEEESCCTTCH-----HHHHHHHTTCSEEEECCCST---------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECC
T ss_pred cCCCEEEEeeCCCcH-----HHHHHHhcCCceEEeecccc---------cchhhhhhhHHHHHHHHhC-CCceEEEeecc
Confidence 357999999999863 33567788899988775432 2346778899999999987 78888888864
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.20 E-value=0.055 Score=47.62 Aligned_cols=96 Identities=13% Similarity=0.012 Sum_probs=58.9
Q ss_pred EeCcCCCCCCCCCHHHHHHH---hcCccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHh----cCCCc
Q psy16526 310 ILGDITEPELGISQNDQKIL---KQNVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHE----MTHLE 374 (422)
Q Consensus 310 v~gDl~~~~~~l~~~~~~~~---~~~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~ 374 (422)
..+|+++++-. ++-++.. ..++|++||+||... +. ++++..+++|+.|+.++.+++.. .+ -.
T Consensus 48 ~~~dv~~~~~~--~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G 124 (252)
T d1zmta1 48 PQLKPMSEQEP--AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SG 124 (252)
T ss_dssp TTSEECCCCSH--HHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CC
T ss_pred EEeccCCHHHH--HHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cc
Confidence 35788776421 1111222 247899999998642 21 34556789999999998887643 22 35
Q ss_pred eEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 375 ALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 375 r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
++|++||..+... ..-...|..+|..-+.+.+.+
T Consensus 125 ~IV~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 158 (252)
T d1zmta1 125 HIIFITSATPFGP------------WKELSTYTSARAGACTLANAL 158 (252)
T ss_dssp EEEEECCSTTTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred eeecccccccccc------------cccccccccccccHHHHHHHH
Confidence 8999999865322 112346777777666655543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.20 E-value=0.07 Score=48.75 Aligned_cols=106 Identities=17% Similarity=0.025 Sum_probs=70.2
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCC--cc--ccccccccceeeEEeec------CCcccccchhHHHHHHHHHH
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNG--PT--GIIAAAGKGFFRTMLCH------ENKVADLVPVDIVINLMICA 75 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g--~~--g~~~~~g~G~lr~~~~~------~~~~~DiVPvD~vvn~~i~a 75 (422)
..+++.+++||+.|.+...-+..|+...... .. -+-.+.+.+-.-.+.++ ....-|++.||=+++++..+
T Consensus 175 ~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~ 254 (346)
T d1ek6a_ 175 DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAA 254 (346)
T ss_dssp CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhh
Confidence 4589999999999999765544443332111 11 11223444444444443 33445899999999997776
Q ss_pred HHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 76 AWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 76 a~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
....... ....+||++++ +++++.|+.+.+.+.+..
T Consensus 255 ~~~~~~~-------~~~~i~Ni~~~--~~~s~~dl~~~i~~~~~~ 290 (346)
T d1ek6a_ 255 LRKLKEQ-------CGCRIYNLGTG--TGYSVLQMVQAMEKASGK 290 (346)
T ss_dssp HHHHTTT-------CCEEEEEECCS--CCEEHHHHHHHHHHHHCS
T ss_pred ccccccc-------cCceEEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 6544422 35679999986 789999999999887664
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=94.18 E-value=0.014 Score=51.75 Aligned_cols=94 Identities=15% Similarity=0.056 Sum_probs=64.6
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.++|.+|+||+.|.+....++.. ......++-.-.++++++...+.|.+|-|+++++.+.-+..
T Consensus 143 ~~~~~~i~r~~~v~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~------ 206 (307)
T d1qyca_ 143 EGIPYTYVSSNCFAGYFLRSLAQ----------AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR------ 206 (307)
T ss_dssp HTCCBEEEECCEEHHHHTTTTTC----------TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG------
T ss_pred cCCCceecccceecCCCccchhh----------hhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChh------
Confidence 46899999999998855433322 22223344445678889999999999999998766542111
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
.....+||++++ +++|+.|+.+...+...+
T Consensus 207 --~~~~~~~~~~~~--~~~s~~ei~~~~~~~~G~ 236 (307)
T d1qyca_ 207 --TLNKTLYLRLPA--NTLSLNELVALWEKKIDK 236 (307)
T ss_dssp --GTTEEEECCCGG--GEEEHHHHHHHHHHHTTS
T ss_pred --hcCceeEEeCCC--CccCHHHHHHHHHHHHCC
Confidence 112346776665 689999999998886543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=94.10 E-value=0.032 Score=48.57 Aligned_cols=77 Identities=14% Similarity=0.019 Sum_probs=51.9
Q ss_pred CccEEEEcccccC----hh----hhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCCccccCCCcccccccCCCCCH
Q psy16526 332 NVSVVFHSAATVK----FD----EALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPYDP 402 (422)
Q Consensus 332 ~~d~ViH~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p 402 (422)
++|++||+||... .. +..+..+++|+.|+..+.+++... .+-.++|++||..+.. |...
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~------------~~~~ 138 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------PTPS 138 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------CCTT
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC------------Cccc
Confidence 5799999998532 11 234456899999999998888653 1125899999875432 1112
Q ss_pred HHHHHHHhhCCHHHhhhc
Q psy16526 403 QKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 403 ~~~y~~~K~~~E~~~~~~ 420 (422)
...|..+|..-+.+.+.+
T Consensus 139 ~~~Y~asKaal~~l~~~l 156 (235)
T d1ooea_ 139 MIGYGMAKAAVHHLTSSL 156 (235)
T ss_dssp BHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHH
Confidence 356788888777776654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.62 E-value=0.049 Score=50.85 Aligned_cols=107 Identities=8% Similarity=0.059 Sum_probs=68.5
Q ss_pred cCCCCEEEEccceeeeccCCCcc--cccc---CCCCccc-----cccccccceeeEEeecCCcccccchhHHHHHHHHHH
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVA--GWVD---NYNGPTG-----IIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICA 75 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~p--GWid---n~~g~~g-----~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~a 75 (422)
..+++.+|+||+.|.+....|.- ++.- +.++..+ ++.....|---.++|+++.+-|.+.||-++++++.+
T Consensus 199 ~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~ 278 (393)
T d1i24a_ 199 AWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIA 278 (393)
T ss_dssp HHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred ccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHH
Confidence 44799999999999997655431 1111 1122221 122334455566789999999999999999998877
Q ss_pred HHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCC
Q psy16526 76 AWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNP 122 (422)
Q Consensus 76 a~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p 122 (422)
..+.. ....|++..+..+++++.++.+.+.+...+.+
T Consensus 279 ~~~~~----------~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~ 315 (393)
T d1i24a_ 279 IANPA----------KAGEFRVFNQFTEQFSVNELASLVTKAGSKLG 315 (393)
T ss_dssp HHSCC----------CTTCEEEEEECSEEEEHHHHHHHHHHHHHTTT
T ss_pred HHhhc----------ccceeeeecCCCCeeEHHHHHHHHHHHHHhhC
Confidence 63211 12233333323367899999999888765544
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=93.49 E-value=0.041 Score=48.57 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=46.5
Q ss_pred CcEEEEeCcCCCCCCCCCHHHHHHHhcCccEEEEcccccChhhhHHHHHHhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy16526 305 AKIKPILGDITEPELGISQNDQKILKQNVSVVFHSAATVKFDEALKLSVTINMLGTKRLVELCHEMTHLEALIHVSTAYC 384 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~r~v~~SS~~~ 384 (422)
.+++++.+|+.+. ........+++.|+|+++.. ++.++.++++++++.+ ++++++.||...
T Consensus 55 ~~~~~~~~d~~~~------~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~~-~~~~~~~s~~~~ 115 (307)
T d1qyca_ 55 SGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEVG-TVKRFFPSEFGN 115 (307)
T ss_dssp TTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHHC-CCSEEECSCCSS
T ss_pred CCcEEEEeecccc------hhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHhc-cccceeeecccc
Confidence 5688999999887 34566678999999998753 4556677888888876 788888877533
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=93.13 E-value=0.042 Score=50.99 Aligned_cols=94 Identities=13% Similarity=0.007 Sum_probs=66.4
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.|.... .+++ ...++..+..|---.++++++..-|.+-||=++++++.++-..
T Consensus 185 ~~i~~~~lR~~~vyGp~~~-----~~~~--i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~------- 250 (361)
T d1kewa_ 185 YGLPTIVTNCSNNYGPYHF-----PEKL--IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG------- 250 (361)
T ss_dssp HCCCEEEEEECEEESTTCC-----TTSH--HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC-------
T ss_pred hCCCEEEEecCceECcCCC-----cCcH--HHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcC-------
Confidence 3799999999999983321 1211 1223333345554556789999999999999999988776221
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ ++.++.++.+...+...
T Consensus 251 ---~~~~~~Ni~s~--~~~s~~~~~~~i~~~~~ 278 (361)
T d1kewa_ 251 ---KAGETYNIGGH--NEKKNLDVVFTICDLLD 278 (361)
T ss_dssp ---CTTCEEEECCC--CEEEHHHHHHHHHHHHH
T ss_pred ---CCCCeEEECCC--CCcchHHHHhHhhhhcc
Confidence 22459999887 78899999888877544
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.83 E-value=0.06 Score=49.14 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=68.1
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccc-cccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTG-IIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYK 84 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g-~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~ 84 (422)
..++|++|+||+.|.+....|-..+ . +... ++-.+-.|---.+.++++..-|.+-||=++.+++.+.....
T Consensus 183 ~~~i~~~ilR~~~v~G~~~~~~~~~-~---~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~---- 254 (341)
T d1sb8a_ 183 CYGFSTIGLRYFNVFGRRQDPNGAY-A---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL---- 254 (341)
T ss_dssp HHCCCCEEEEECCEECTTCCCCSTT-C---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG----
T ss_pred HhCCCeEEEEeceeeccCcCCCCch-h---hhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccc----
Confidence 3479999999999888655442211 1 1111 11112234344567888999999999999988766552111
Q ss_pred cCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhcCC
Q psy16526 85 NSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQNP 122 (422)
Q Consensus 85 ~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~p 122 (422)
.....+||++++ +++|+.++.+.+.+......
T Consensus 255 ----~~~~~~~~~~~~--~~~si~~i~~~i~~~~~~~~ 286 (341)
T d1sb8a_ 255 ----DARNQVYNIAVG--GRTSLNQLFFALRDGLAENG 286 (341)
T ss_dssp ----GGCSEEEEESCS--CCEEHHHHHHHHHHHHHHTT
T ss_pred ----cccceeeeeccc--ccchHHHHHHHHHHHhcccc
Confidence 123569999886 78999999999998776543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.44 E-value=0.13 Score=45.52 Aligned_cols=105 Identities=13% Similarity=0.126 Sum_probs=63.6
Q ss_pred cCcEEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccCh-------hhhHHHHHHhhHHHHHHHHHHHHhc--CCC
Q psy16526 304 LAKIKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVKF-------DEALKLSVTINMLGTKRLVELCHEM--THL 373 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~ 373 (422)
...+..+.+|+++....-. .+.........|++++.|+.... .+..+..+++|+.|+..+.+++... .+-
T Consensus 63 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~ 142 (269)
T d1xu9a_ 63 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN 142 (269)
T ss_dssp CSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC
Confidence 3567788889887531100 00112223468999999986531 1344566899999999988877531 012
Q ss_pred ceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 374 EALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 374 ~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
.++|.+||..+.- |...+..|+.+|..-+.+.+.+
T Consensus 143 G~ii~isS~~~~~------------~~p~~~~Y~asKaal~~~~~~L 177 (269)
T d1xu9a_ 143 GSIVVVSSLAGKV------------AYPMVAAYSASKFALDGFFSSI 177 (269)
T ss_dssp CEEEEEEEGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcceEeccchhcC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 4799999875431 1122457777777766665544
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=92.15 E-value=0.2 Score=46.27 Aligned_cols=111 Identities=13% Similarity=-0.014 Sum_probs=66.0
Q ss_pred CCCCEEEEccceeeeccCCCc-cccccCCCCcccccc-----------------ccccceeeEEeec------CCccccc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPV-AGWVDNYNGPTGIIA-----------------AAGKGFFRTMLCH------ENKVADL 62 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~-pGWidn~~g~~g~~~-----------------~~g~G~lr~~~~~------~~~~~Di 62 (422)
.+++++++||+.|.|....+. +.|.++-.+....++ ....|..-.+.|+ ++..-|+
T Consensus 193 ~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdf 272 (383)
T d1gy8a_ 193 YGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDY 272 (383)
T ss_dssp HCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECE
T ss_pred hCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEee
Confidence 479999999999998765542 223222222111111 1111222233333 3444589
Q ss_pred chhHHHHHHHHHHHHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 63 VPVDIVINLMICAAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 63 VPvD~vvn~~i~aa~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+.||-|+++++.+.-...... .........|||++|+ +++++.++.+.+.+....
T Consensus 273 i~v~D~~~a~~~~~~~~~~~~-~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~ 327 (383)
T d1gy8a_ 273 VHVCDLASAHILALDYVEKLG-PNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGH 327 (383)
T ss_dssp EEHHHHHHHHHHHHHHHHTCC-TTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCC
T ss_pred EEHHHHHHHHHHHHhhhcccc-ccccccCccEEEeCCC--CceeHHHHHHHHHHHhCC
Confidence 999999999877765443210 0001234579999998 689999999999886553
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=92.13 E-value=0.06 Score=49.29 Aligned_cols=95 Identities=13% Similarity=-0.036 Sum_probs=66.2
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccC
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNS 86 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~ 86 (422)
.+++++|+||+.|.|..+.+- + .....+.-...|---.+.++++..-|.+=||=++++++.+.- +
T Consensus 177 ~~i~~~ilR~~~vyGp~~~~~-~------~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~----~---- 241 (346)
T d1oc2a_ 177 FGVKATISNCSNNYGPYQHIE-K------FIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT----K---- 241 (346)
T ss_dssp HCCEEEEEEECCEESTTCCTT-S------HHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH----H----
T ss_pred cCCCEEEEeecceeCCCCCcc-c------hhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh----h----
Confidence 479999999999998432111 1 111222223345555678999999999999999998766542 1
Q ss_pred CCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 87 NGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 87 ~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+....+||++++ ++.++.++.+...+...+
T Consensus 242 --~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~ 271 (346)
T d1oc2a_ 242 --GRMGETYLIGAD--GEKNNKEVLELILEKMGQ 271 (346)
T ss_dssp --CCTTCEEEECCS--CEEEHHHHHHHHHHHTTC
T ss_pred --cccCcccccccc--ccccchHHHHHHHHHhCC
Confidence 234569999887 689999999998876554
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=91.23 E-value=0.066 Score=46.99 Aligned_cols=89 Identities=15% Similarity=0.153 Sum_probs=59.6
Q ss_pred CCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhccCC
Q psy16526 8 NLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKNSN 87 (422)
Q Consensus 8 ~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~~~ 87 (422)
+++.+|+||+.|.+......+ .++.....+-...+. ++...+.+-+|-+++++..++ ++
T Consensus 141 ~~~~~i~R~~~vyG~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~----~~----- 199 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDGNNFVK----------TMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVI----DE----- 199 (281)
T ss_dssp CSSEEEEEECSEESSSSCHHH----------HHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHH----HH-----
T ss_pred CCCccccceeEEeCCCccccc----------chhhhhccCCceeec--CCceeccchhhhhhhhhhhhh----hh-----
Confidence 579999999999874322111 122222222222233 357789999999999877775 22
Q ss_pred CCCCceEEEccCCCCCCccHhhHHHHHHHHhhcC
Q psy16526 88 GAQGITVYNCCTGQRNPISWKQFVNYSFESMRQN 121 (422)
Q Consensus 88 ~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~~ 121 (422)
....+||++++ .++|+.++.+...+.+...
T Consensus 200 --~~~g~~~~~~~--~~~s~~e~~~~i~~~~g~~ 229 (281)
T d1vl0a_ 200 --KNYGTFHCTCK--GICSWYDFAVEIFRLTGID 229 (281)
T ss_dssp --TCCEEEECCCB--SCEEHHHHHHHHHHHHCCC
T ss_pred --cccCceeEeCC--CccchHHHHHHHHHHhCCC
Confidence 12359999887 5899999999999877653
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=89.73 E-value=0.31 Score=44.11 Aligned_cols=104 Identities=20% Similarity=0.133 Sum_probs=64.5
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCcccc---c--cccccceeeEEeec------CCcccccchhHHHHHHHHH
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGI---I--AAAGKGFFRTMLCH------ENKVADLVPVDIVINLMIC 74 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~---~--~~~g~G~lr~~~~~------~~~~~DiVPvD~vvn~~i~ 74 (422)
..++|++|+||+.|.+....+.-|.-... .+..+ + .+.+.+-.-.+.|+ ++..-|++=||=++.+...
T Consensus 167 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~ 245 (338)
T d1udca_ 167 QPDWSIALLRYFNPVGAHPSGDMGEDPQG-IPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVV 245 (338)
T ss_dssp STTCEEEEEEECEEECCCTTSSSCCCCCS-SCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHH
T ss_pred ccCCeEEEEeeccEEeccCCCCCCCCccc-cHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccc
Confidence 45899999999999987655443321111 11111 1 12222223334454 4455578888878877666
Q ss_pred HHHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 75 AAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 75 aa~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
+....... ....+||++++ +++|+.++.+.+.+...
T Consensus 246 ~~~~~~~~-------~~~~i~Ni~~~--~~~si~e~~~~i~~~~g 281 (338)
T d1udca_ 246 AMEKLANK-------PGVHIYNLGAG--VGNSVLDVVNAFSKACG 281 (338)
T ss_dssp HHHHHTTC-------CEEEEEEESCS--SCEEHHHHHHHHHHHHT
T ss_pred cccccccc-------cCcceeeecCC--CCCcHHHHHHHHHHHHC
Confidence 65443321 34579999986 68999999999988654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.63 E-value=0.15 Score=42.92 Aligned_cols=81 Identities=14% Similarity=0.084 Sum_probs=47.0
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccccccccccceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKGFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
..+++.+|+||+.|.+......+.... .+.. -.+.....|++|-|+.+++.+..+..
T Consensus 163 ~~~~~~~ilRp~~v~g~~~~~~~~~~~-----------~~~~-------~~~~~~~~i~~~Dva~a~~~~l~~~~----- 219 (252)
T d2q46a1 163 DSGTPYTIIRAGGLLDKEGGVRELLVG-----------KDDE-------LLQTDTKTVPRADVAEVCIQALLFEE----- 219 (252)
T ss_dssp HSSSCEEEEEECEEECSCTTSSCEEEE-----------STTG-------GGGSSCCEEEHHHHHHHHHHHTTCGG-----
T ss_pred cccccceeecceEEECCCcchhhhhhc-----------cCcc-------cccCCCCeEEHHHHHHHHHHHhCCcc-----
Confidence 457999999999998854322221111 1110 01222357899999998877763211
Q ss_pred CCCCCCceEEEccCCCC-CCccHhhHHHH
Q psy16526 86 SNGAQGITVYNCCTGQR-NPISWKQFVNY 113 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~-np~t~~~~~~~ 113 (422)
....+||++++.. ...++.++.+.
T Consensus 220 ----~~g~~~~i~~~~~~~~~~~~~~~~l 244 (252)
T d2q46a1 220 ----AKNKAFDLGSKPEGTSTPTKDFKAL 244 (252)
T ss_dssp ----GTTEEEEEEECCTTTSCCCCCHHHH
T ss_pred ----ccCcEEEEeeCCCCCChhHHHHHHH
Confidence 1346999987643 33456666544
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=89.40 E-value=0.6 Score=41.32 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=59.4
Q ss_pred cCcEEEEeCcCCCCCCCCC-HHHHHHHhcCccEEEEcccccChh-------hhHHHHHHhhHHHHHHHHHHHH----hcC
Q psy16526 304 LAKIKPILGDITEPELGIS-QNDQKILKQNVSVVFHSAATVKFD-------EALKLSVTINMLGTKRLVELCH----EMT 371 (422)
Q Consensus 304 ~~~v~~v~gDl~~~~~~l~-~~~~~~~~~~~d~ViH~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~ 371 (422)
..++.++.+|+++++-.-. -........++|+++|+||..... ......+.+|..+...+...+. ...
T Consensus 74 g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 153 (294)
T d1w6ua_ 74 GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQ 153 (294)
T ss_dssp SSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccccc
Confidence 3567899999998741100 000111124789999999975422 2344557788888777765543 222
Q ss_pred CCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 372 HLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 372 ~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
....++.+||.++... .| ....|..+|..-+.+.+.+
T Consensus 154 ~~~~i~~~ss~~~~~~----------~~--~~~~YsasKaal~~ltk~l 190 (294)
T d1w6ua_ 154 KGAAFLSITTIYAETG----------SG--FVVPSASAKAGVEAMSKSL 190 (294)
T ss_dssp CCEEEEEECCTHHHHC----------CT--TCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhc----------cc--ccchHHHHHHHHHHHHHHH
Confidence 2455666666543211 11 1335677777666665543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.14 E-value=0.33 Score=44.01 Aligned_cols=111 Identities=14% Similarity=-0.019 Sum_probs=65.2
Q ss_pred ccCCCCEEEEccceeeeccCCCccccccCC--CCcccccc--ccccceeeEEeec------CCcccccchhHHHHHHHHH
Q psy16526 5 ESGNLPVAIVRPSIVISSVNEPVAGWVDNY--NGPTGIIA--AAGKGFFRTMLCH------ENKVADLVPVDIVINLMIC 74 (422)
Q Consensus 5 ~~~~lPi~IvRPsIV~~~~~eP~pGWidn~--~g~~g~~~--~~g~G~lr~~~~~------~~~~~DiVPvD~vvn~~i~ 74 (422)
...++|++|+||+.|.+....+.-|..... +.....+. ..+.+---.+.|+ ...+-|++.+..++.+++.
T Consensus 171 ~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~ 250 (347)
T d1z45a2 171 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIA 250 (347)
T ss_dssp STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHH
T ss_pred hccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccc
Confidence 356799999999999987655554432211 11111111 1122211122333 3456688888888888877
Q ss_pred HHHHHhhhhccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 75 AAWKTAVKYKNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 75 aa~~~~~~~~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+.-...... .......+||++++ +|+|+.++.+.+.+....
T Consensus 251 ~~~~~~~~~---~~~~~~~~~Ni~~~--~~~s~~e~~~~i~~~~~~ 291 (347)
T d1z45a2 251 ALQYLEAYN---ENEGLCREWNLGSG--KGSTVFEVYHAFCKASGI 291 (347)
T ss_dssp HHHHHHHSC---TTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred ccccccccc---ccccccccceecCC--CcccHHHHHHHHHHHHCC
Confidence 664433220 01123579999987 699999999998886553
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=87.78 E-value=0.24 Score=43.47 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=52.5
Q ss_pred cCCCCEEEEccceeeeccCCCccccccCCCCccc-cccccccc-eeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhh
Q psy16526 6 SGNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTG-IIAAAGKG-FFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKY 83 (422)
Q Consensus 6 ~~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g-~~~~~g~G-~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~ 83 (422)
..++|++++||+.|.+... ++-........ ++-....| ....+.++++..-+++=|+-++++++.+. .+
T Consensus 157 ~~~~~~~~~r~~~vyGp~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~----~~- 227 (307)
T d1eq2a_ 157 EANSQIVGFRYFNVYGPRE----GHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL----EN- 227 (307)
T ss_dssp GCSSCEEEEEECEEESSSC----GGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH----HH-
T ss_pred ccccccccccceeEeeccc----cccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh----hh-
Confidence 5579999999999998432 21111111111 11122222 33445678888889999999998876554 11
Q ss_pred ccCCCCCCceEEEccCCCCCCccHhhHHHHHHHHh
Q psy16526 84 KNSNGAQGITVYNCCTGQRNPISWKQFVNYSFESM 118 (422)
Q Consensus 84 ~~~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~ 118 (422)
....+||++++ ++.|+.++.+...+..
T Consensus 228 ------~~~~~~~~~~~--~~~si~~i~~~i~~~~ 254 (307)
T d1eq2a_ 228 ------GVSGIFNLGTG--RAESFQAVADATLAYH 254 (307)
T ss_dssp ------CCCEEEEESCS--CCBCHHHHHHHC----
T ss_pred ------ccccccccccc--cchhHHHHHHHHHHhc
Confidence 23469999988 6889999998876643
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=87.51 E-value=0.47 Score=42.98 Aligned_cols=79 Identities=10% Similarity=0.032 Sum_probs=50.7
Q ss_pred cCccEEEEcccccC-----hh----hhHHHHHHhhHHHHHHHHHHHHhc-CCCceEEEEeCCccccCCCcccccccCCCC
Q psy16526 331 QNVSVVFHSAATVK-----FD----EALKLSVTINMLGTKRLVELCHEM-THLEALIHVSTAYCNCDREEVREIIYSPPY 400 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~ 400 (422)
.++|+++|.||... +. +.+...+++|+.|+..+.+.+... ..-.++|.+||..+... .+.+
T Consensus 112 G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~--------~p~y- 182 (329)
T d1uh5a_ 112 GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV--------VPGY- 182 (329)
T ss_dssp CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC--------CTTC-
T ss_pred CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccc--------cccc-
Confidence 57899999998643 11 345667899999999998888763 21257888887644211 1111
Q ss_pred CHHHHHHHHhhCCHHHhhhc
Q psy16526 401 DPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 401 ~p~~~y~~~K~~~E~~~~~~ 420 (422)
.+.|+.+|..-|.+.+.+
T Consensus 183 --~~~y~asKaal~~ltr~l 200 (329)
T d1uh5a_ 183 --GGGMSSAKAALESDTRVL 200 (329)
T ss_dssp --TTTHHHHHHHHHHHHHHH
T ss_pred --chhhhhhhccccccchhh
Confidence 224666777666666544
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.76 E-value=0.25 Score=44.07 Aligned_cols=96 Identities=15% Similarity=-0.007 Sum_probs=61.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCccccccccccc-eeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGKG-FFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~G-~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+-|.|....+ .+ .. ......+.....| -.....++++..-|++-||=++++++.++ .+
T Consensus 166 ~~~~~~~lr~~~vyGp~~~~-~~-~~--~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~----~~--- 234 (321)
T d1rpna_ 166 FGLHASSGILFNHESPLRGI-EF-VT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML----QQ--- 234 (321)
T ss_dssp HCCCEEEEEECCEECTTSCT-TS-HH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH----HS---
T ss_pred cCCcEEEEEEecccCCCccc-cc-cH--HHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHH----hc---
Confidence 46999999999887733110 00 00 0112222222222 23446788899999999999999887775 21
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhh
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMR 119 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~ 119 (422)
....+||++++ ++.++.++.+...+...
T Consensus 235 ----~~~~~~ni~~~--~~~s~~~~~~~~~~~~~ 262 (321)
T d1rpna_ 235 ----DKADDYVVATG--VTTTVRDMCQIAFEHVG 262 (321)
T ss_dssp ----SSCCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred ----CCcCCceeccc--ccceehhhhHHHHHHhC
Confidence 23457999887 68899999888776543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.18 E-value=0.51 Score=42.19 Aligned_cols=97 Identities=12% Similarity=-0.047 Sum_probs=58.8
Q ss_pred CCCCEEEEccceeeeccCCCccccccCCCCcccccccccc-ceeeEEeecCCcccccchhHHHHHHHHHHHHHHhhhhcc
Q psy16526 7 GNLPVAIVRPSIVISSVNEPVAGWVDNYNGPTGIIAAAGK-GFFRTMLCHENKVADLVPVDIVINLMICAAWKTAVKYKN 85 (422)
Q Consensus 7 ~~lPi~IvRPsIV~~~~~eP~pGWidn~~g~~g~~~~~g~-G~lr~~~~~~~~~~DiVPvD~vvn~~i~aa~~~~~~~~~ 85 (422)
.++|++|+||+.|.|-... +++..+ .....+.-... +....+.+++....|++-||=|++++..++ .+
T Consensus 176 ~~~~~~ilR~~~vyGp~~~--~~~~~~--~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~----~~--- 244 (339)
T d1n7ha_ 176 YGLFACNGILFNHESPRRG--ENFVTR--KITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLML----QQ--- 244 (339)
T ss_dssp HCCEEEEEEECCEECTTSC--TTSHHH--HHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHH----TS---
T ss_pred hCCCEEEEEEccccCCCCC--CCCCcc--hhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHH----hc---
Confidence 4699999999999883311 111100 00111111112 223446688999999999999999877665 11
Q ss_pred CCCCCCceEEEccCCCCCCccHhhHHHHHHHHhhc
Q psy16526 86 SNGAQGITVYNCCTGQRNPISWKQFVNYSFESMRQ 120 (422)
Q Consensus 86 ~~~~~~~~vy~~~ss~~np~t~~~~~~~~~~~~~~ 120 (422)
+....++++++ .+.++.++.+...+....
T Consensus 245 ----~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~ 273 (339)
T d1n7ha_ 245 ----EKPDDYVVATE--EGHTVEEFLDVSFGYLGL 273 (339)
T ss_dssp ----SSCCEEEECCS--CEEEHHHHHHHHHHHTTC
T ss_pred ----CCCCccccccc--cccccchhhhhhhhhhhc
Confidence 12334555554 578999999888776543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.91 E-value=1.3 Score=37.85 Aligned_cols=103 Identities=13% Similarity=-0.001 Sum_probs=61.9
Q ss_pred CcEEEEeCcCCCCCCCCCH--HHHHHHhcCccEEEEcccccCh-------------hhhHHHHHHhhHHHHHHHHHHHHh
Q psy16526 305 AKIKPILGDITEPELGISQ--NDQKILKQNVSVVFHSAATVKF-------------DEALKLSVTINMLGTKRLVELCHE 369 (422)
Q Consensus 305 ~~v~~v~gDl~~~~~~l~~--~~~~~~~~~~d~ViH~Aa~~~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~ 369 (422)
........|+.+.... ++ ..........|.+++.++.... .+.++..+++|+.|+.++.+++..
T Consensus 51 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 129 (248)
T d2o23a1 51 NNCVFAPADVTSEKDV-QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAG 129 (248)
T ss_dssp TTEEEEECCTTCHHHH-HHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcccccccccccccc-cccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHH
Confidence 4566777788765310 00 0011122457888888754321 134556789999999999988754
Q ss_pred c---------CCCceEEEEeCCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 370 M---------THLEALIHVSTAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 370 ~---------~~~~r~v~~SS~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
. .+-.++|++||.++.. |...+..|+.+|..-+.+.+.+
T Consensus 130 ~~~~~~~~~~~~~G~Ii~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~l 177 (248)
T d2o23a1 130 EMGQNEPDQGGQRGVIINTASVAAFE------------GQVGQAAYSASKGGIVGMTLPI 177 (248)
T ss_dssp HHTTSCCCTTSCCEEEEEECCTHHHH------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccCCceEEEEecchhhcc------------CCCCchHHHHHHHHHHHHHHHH
Confidence 2 0123799999986542 1123456778887777766654
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| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=81.82 E-value=2.6 Score=36.44 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=47.0
Q ss_pred cCccEEEEcccccChh---------------------hhHHHHHHhhHHHHHHHHHHHHhc---------CCCceEEEEe
Q psy16526 331 QNVSVVFHSAATVKFD---------------------EALKLSVTINMLGTKRLVELCHEM---------THLEALIHVS 380 (422)
Q Consensus 331 ~~~d~ViH~Aa~~~~~---------------------~~~~~~~~~Nv~gt~~ll~~a~~~---------~~~~r~v~~S 380 (422)
.++|++||+||..... ......+.+|+.++..+.+++.+. +...+++.+|
T Consensus 97 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~ 176 (284)
T d1e7wa_ 97 GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 176 (284)
T ss_dssp SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEEC
T ss_pred CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCcccccc
Confidence 4789999999975311 011235788999999988876431 1123566666
Q ss_pred CCccccCCCcccccccCCCCCHHHHHHHHhhCCHHHhhhc
Q psy16526 381 TAYCNCDREEVREIIYSPPYDPQKIIETMEWMDDSLVNTL 420 (422)
Q Consensus 381 S~~~~g~~~~~~E~~~~~p~~p~~~y~~~K~~~E~~~~~~ 420 (422)
|.... .|...+..|..+|..-+.+.+.+
T Consensus 177 s~~~~------------~~~~~~~~Y~asKaal~~lt~~l 204 (284)
T d1e7wa_ 177 DAMTN------------QPLLGYTIYTMAKGALEGLTRSA 204 (284)
T ss_dssp CTTTT------------SCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccccc------------CCccceeeeccccccchhhhHHH
Confidence 65432 12223456777777766665544
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