Diaphorina citri psyllid: psy16535


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
VQLTHWTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPACKERSDHYAMGADMKSFKIQE
cccccEEECccccccHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHccccEEEEEEEEcccHHHHHcccccccccHHHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccEEEEEEHHHHcccHHHHHHHHccccccccccHHHHHHHccccccccccc
*QLTHWTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL********************************LETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPACKERSDHYAMGADMKSFK***
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VQLTHWTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPACKERSDHYAMGADMKSFKIQE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cytoplasmic tRNA 2-thiolation protein 1 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated urm1 onto the uridine of tRNAs at wobble position.confidentQ5FW05
Cytoplasmic tRNA 2-thiolation protein 1 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. May also be involved in protein urmylation and in invasive and pseudohyphal growth.confidentP53088
Cytoplasmic tRNA 2-thiolation protein 1 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.confidentQ7Q9I4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0002144 [CC]cytosolic tRNA wobble base thiouridylase complexprobableGO:0043234, GO:0005737, GO:0032991, GO:0005829, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044445, GO:0044424
GO:0005488 [MF]bindingprobableGO:0003674
GO:0034227 [BP]tRNA thio-modificationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0008033, GO:0034660, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0034470, GO:0009987, GO:0006725, GO:0043412, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0006396
GO:0002098 [BP]tRNA wobble uridine modificationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0008033, GO:0009987, GO:0006725, GO:0002097, GO:0043412, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0006396

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3A2K, chain A
Confidence level:very confident
Coverage over the Query: 16-297
View the alignment between query and template
View the model in PyMOL