Psyllid ID: psy16576

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKNY
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEEEEEEEEcccccEEcccEEEEEEEHHHHHccccHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccccEEEcccccEEEEEEEEEcccccccccccEEEEEEHHHHHccccHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mvsltrssasNRIIAAKDHASIQIAIadvdpatgrttdnlkMYAICGQIRRMGESDDCIGRlakddgiiakny
Flexible Loop (DISEMBL)
mvsltrssASNRiiaakdhasiqiaiadvdpatgrttdnLKMYAICGQIRRMGESDDCIgrlakddgiiakny
Low Complexity Region (SEG)
MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKNY
Disordered region (IsUnstruct)
************IIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAK*********
Disordered Region (DISOPRED)
MVSLTR*SASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIA***
Disordered Region (DISEMBL)
*********SNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKNY
Disordered Region (DISPRO)
*VSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIA***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKNY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
Q6XIR2	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.75	2e-23
B4I2S0	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.75	2e-23
O76927	83	40S ribosomal protein S21	yes	N/A	0.931	0.819	0.75	2e-23
B3NA78	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.75	2e-23
Q962Q8	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.735	2e-23
Q6PUF8	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.735	2e-23
B4Q8M1	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.75	2e-23
B4N002	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.735	2e-23
Q29KF5	83	40S ribosomal protein S21	yes	N/A	0.931	0.819	0.735	2e-23
B4GSC0	83	40S ribosomal protein S21	N/A	N/A	0.931	0.819	0.735	2e-23

>sp|Q6XIR2|RS21_DROYA 40S ribosomal protein S21 OS=Drosophila yakuba GN=RpS21 PE=3 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.
Drosophila yakuba (taxid: 7245)

>sp|B4I2S0|RS21_DROSE 40S ribosomal protein S21 OS=Drosophila sechellia GN=RpS21 PE=3 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila sechellia (taxid: 7238)

>sp|O76927|RS21_DROME 40S ribosomal protein S21 OS=Drosophila melanogaster GN=RpS21 PE=1 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila melanogaster (taxid: 7227)

>sp|B3NA78|RS21_DROER 40S ribosomal protein S21 OS=Drosophila erecta GN=RpS21 PE=3 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila erecta (taxid: 7220)

>sp|Q962Q8|RS21_SPOFR 40S ribosomal protein S21 OS=Spodoptera frugiperda GN=RpS21 PE=3 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 56/68 (82%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNR+I AKDHAS+Q+ IADVDPATGR  D  KMY +CG IRRMGESDDCI RL K 
Sbjct: 16 KCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKK 75

Query: 66 DGIIAKNY 73
          DGI+AKNY
Sbjct: 76 DGILAKNY 83

Spodoptera frugiperda (taxid: 7108)

>sp|Q6PUF8|RS21_BOMMO 40S ribosomal protein S21 OS=Bombyx mori GN=RpS21 PE=3 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 56/68 (82%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNR+I AKDHAS+Q+ IADVDPATGR  D  KMY +CG IRRMGESDDCI RL K 
Sbjct: 16 KCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKK 75

Query: 66 DGIIAKNY 73
          DGI+AKNY
Sbjct: 76 DGILAKNY 83

Bombyx mori (taxid: 7091)

>sp|B4Q8M1|RS21_DROSI 40S ribosomal protein S21 OS=Drosophila simulans GN=RpS21 PE=3 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 56/68 (82%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q+ I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLTIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila simulans (taxid: 7240)

>sp|B4N002|RS21_DROWI 40S ribosomal protein S21 OS=Drosophila willistoni GN=RpS21 PE=3 SV=1

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DG+I KN+
Sbjct: 76 DGLITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila willistoni (taxid: 7260)

>sp|Q29KF5|RS21_DROPS 40S ribosomal protein S21 OS=Drosophila pseudoobscura pseudoobscura GN=RpS21 PE=3 SV=2

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DG+I KN+
Sbjct: 76 DGLITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|B4GSC0|RS21_DROPE 40S ribosomal protein S21 OS=Drosophila persimilis GN=RpS21 PE=3 SV=1

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DG+I KN+
Sbjct: 76 DGLITKNF 83

May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.

Drosophila persimilis (taxid: 7234)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
110671526	83	putative ribosomal protein S21 [Diaphori	0.931	0.819	0.985	4e-30
345483752	99	PREDICTED: 40S ribosomal protein S21-lik	0.931	0.686	0.794	2e-23
389032515	83	ribosomal protein S21e [Ctenocephalides	0.931	0.819	0.794	2e-23
242002994	83	40S ribosomal protein S21, putative [Ped	0.931	0.819	0.779	8e-23
70909593	83	ribosomal protein S21e [Sphaerius sp. AP	0.931	0.819	0.75	4e-22
380030314	83	PREDICTED: 40S ribosomal protein S21-lik	0.931	0.819	0.735	5e-22
24581262	83	ribosomal protein S21, isoform A [Drosop	0.931	0.819	0.75	7e-22
112984360	83	40S ribosomal protein S21 [Bombyx mori]	0.931	0.819	0.735	9e-22
195576177	83	GD23188 [Drosophila simulans] gi|3006811	0.931	0.819	0.75	9e-22
194758453	83	GF14986 [Drosophila ananassae] gi|195161	0.931	0.819	0.735	1e-21

>gi|110671526|gb|ABG82014.1| putative ribosomal protein S21 [Diaphorina citri]

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 67/68 (98%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          R SASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD
Sbjct: 16 RCSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 75

Query: 66 DGIIAKNY 73
          DGIIAKNY
Sbjct: 76 DGIIAKNY 83

Source: Diaphorina citri

Species: Diaphorina citri

Genus: Diaphorina

Family: Psyllidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483752|ref|XP_001604670.2| PREDICTED: 40S ribosomal protein S21-like [Nasonia vitripennis]

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/68 (79%), Positives = 58/68 (85%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHASIQ+A+ADVDP TGR TD  KMYAICG IRRMGESDDCI RL K 
Sbjct: 32 KCSASNRIIHAKDHASIQMALADVDPTTGRMTDTYKMYAICGAIRRMGESDDCIVRLGKK 91

Query: 66 DGIIAKNY 73
          DGI+AKNY
Sbjct: 92 DGILAKNY 99

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389032515|gb|AFK82394.1| ribosomal protein S21e [Ctenocephalides felis]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/68 (79%), Positives = 59/68 (86%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHASIQ+ IA+VDP TGR TD  KMYAICG IRRMGESDDCIGRLAK 
Sbjct: 16 KCSASNRIIHAKDHASIQLNIAEVDPTTGRMTDTSKMYAICGAIRRMGESDDCIGRLAKK 75

Query: 66 DGIIAKNY 73
          DGI+AKN+
Sbjct: 76 DGIVAKNF 83

Source: Ctenocephalides felis

Species: Ctenocephalides felis

Genus: Ctenocephalides

Family: Pulicidae

Order: Siphonaptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242002994|ref|XP_002422570.1| 40S ribosomal protein S21, putative [Pediculus humanus corporis] gi|212505360|gb|EEB09832.1| 40S ribosomal protein S21, putative [Pediculus humanus corporis]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 59/68 (86%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHASIQ+ IA+VDP TGR TD+ KMYAICG IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASIQLQIAEVDPQTGRMTDSTKMYAICGAIRRMGESDDCIARLAKR 75

Query: 66 DGIIAKNY 73
          DGI+AKN+
Sbjct: 76 DGILAKNF 83

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|70909593|emb|CAJ17217.1| ribosomal protein S21e [Sphaerius sp. APV-2005]

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 59/68 (86%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHASIQI+IA+VDP+TGR T+N K YA+CG IRRMGESDDCI RL K 
Sbjct: 16 KCSASNRIIHAKDHASIQISIAEVDPSTGRMTENSKSYALCGAIRRMGESDDCINRLVKK 75

Query: 66 DGIIAKNY 73
          DGI+AKN+
Sbjct: 76 DGILAKNF 83

Source: Sphaerius sp. APV-2005

Species: Sphaerius sp. APV-2005

Genus: Sphaerius

Family: Sphaeriusidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030314|ref|XP_003698794.1| PREDICTED: 40S ribosomal protein S21-like isoform 1 [Apis florea] gi|380030316|ref|XP_003698795.1| PREDICTED: 40S ribosomal protein S21-like isoform 2 [Apis florea]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + S+SNRII AKDHASIQ++IADVDP TGR +D+ KMYAICG IRRMGESDDC+ RLAK+
Sbjct: 16 KCSSSNRIIHAKDHASIQLSIADVDPETGRMSDSQKMYAICGAIRRMGESDDCLVRLAKN 75

Query: 66 DGIIAKNY 73
          DGI+ KN+
Sbjct: 76 DGILPKNF 83

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24581262|ref|NP_722853.1| ribosomal protein S21, isoform A [Drosophila melanogaster] gi|24581264|ref|NP_722854.1| ribosomal protein S21, isoform B [Drosophila melanogaster] gi|24581267|ref|NP_722855.1| ribosomal protein S21, isoform D [Drosophila melanogaster] gi|442625593|ref|NP_001259970.1| ribosomal protein S21, isoform F [Drosophila melanogaster] gi|194855129|ref|XP_001968482.1| GG24892 [Drosophila erecta] gi|195342115|ref|XP_002037647.1| GM18373 [Drosophila sechellia] gi|195470899|ref|XP_002087744.1| GE18186 [Drosophila yakuba] gi|74837978|sp|Q6XIR2.1|RS21_DROYA RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|74893567|sp|O76927.1|RS21_DROME RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|300681100|sp|B3NA78.1|RS21_DROER RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|300681105|sp|B4I2S0.1|RS21_DROSE RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|3336844|emb|CAA08751.1| ribosomal protein S21 [Drosophila melanogaster] gi|7295891|gb|AAF51191.1| ribosomal protein S21, isoform A [Drosophila melanogaster] gi|22945336|gb|AAN10392.1| ribosomal protein S21, isoform B [Drosophila melanogaster] gi|22945338|gb|AAN10394.1| ribosomal protein S21, isoform D [Drosophila melanogaster] gi|38047775|gb|AAR09790.1| similar to Drosophila melanogaster oho23B, partial [Drosophila yakuba] gi|38048239|gb|AAR10022.1| similar to Drosophila melanogaster oho23B, partial [Drosophila yakuba] gi|51092009|gb|AAT94418.1| RH57501p [Drosophila melanogaster] gi|190660349|gb|EDV57541.1| GG24892 [Drosophila erecta] gi|194132497|gb|EDW54065.1| GM18373 [Drosophila sechellia] gi|194173845|gb|EDW87456.1| GE18186 [Drosophila yakuba] gi|440213239|gb|AGB92507.1| ribosomal protein S21, isoform F [Drosophila melanogaster]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|112984360|ref|NP_001037207.1| 40S ribosomal protein S21 [Bombyx mori] gi|74837362|sp|Q6PUF8.1|RS21_BOMMO RecName: Full=40S ribosomal protein S21 gi|74844827|sp|Q962Q8.1|RS21_SPOFR RecName: Full=40S ribosomal protein S21 gi|15213830|gb|AAK92190.1|AF400218_1 ribosomal protein S21 [Spodoptera frugiperda] gi|46397623|gb|AAS91554.1| ribosomal protein S21 [Bombyx mori] gi|54609327|gb|AAV34879.1| ribosomal protein S21 [Bombyx mori] gi|310769825|gb|ADP21470.1| ribosomal protein S21 [Antheraea yamamai]

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 56/68 (82%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNR+I AKDHAS+Q+ IADVDPATGR  D  KMY +CG IRRMGESDDCI RL K 
Sbjct: 16 KCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKK 75

Query: 66 DGIIAKNY 73
          DGI+AKNY
Sbjct: 76 DGILAKNY 83

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195576177|ref|XP_002077953.1| GD23188 [Drosophila simulans] gi|300681106|sp|B4Q8M1.1|RS21_DROSI RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|194189962|gb|EDX03538.1| GD23188 [Drosophila simulans]

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 56/68 (82%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q+ I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLTIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DGII KN+
Sbjct: 76 DGIITKNF 83

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194758453|ref|XP_001961476.1| GF14986 [Drosophila ananassae] gi|195161960|ref|XP_002021824.1| GL26288 [Drosophila persimilis] gi|195438052|ref|XP_002066951.1| GK24281 [Drosophila willistoni] gi|198473052|ref|XP_001356160.2| GA15559 [Drosophila pseudoobscura pseudoobscura] gi|300681099|sp|B3MLA8.1|RS21_DROAN RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|300681103|sp|B4GSC0.1|RS21_DROPE RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|300681104|sp|B4N002.1|RS21_DROWI RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|300681229|sp|Q29KF5.2|RS21_DROPS RecName: Full=40S ribosomal protein S21; AltName: Full=Overgrown hematopoietic organs at 23B gi|190615173|gb|EDV30697.1| GF14986 [Drosophila ananassae] gi|194103624|gb|EDW25667.1| GL26288 [Drosophila persimilis] gi|194163036|gb|EDW77937.1| GK24281 [Drosophila willistoni] gi|198139277|gb|EAL33220.2| GA15559 [Drosophila pseudoobscura pseudoobscura]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct: 16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query: 66 DGIIAKNY 73
          DG+I KN+
Sbjct: 76 DGLITKNF 83

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
FB|FBgn0015521	83	RpS21 "Ribosomal protein S21"	0.931	0.819	0.75	6.1e-23
UNIPROTKB|B3NA78	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.75	6.1e-23
UNIPROTKB|B4I2S0	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.75	6.1e-23
UNIPROTKB|Q6XIR2	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.75	6.1e-23
UNIPROTKB|B4Q8M1	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.75	7.8e-23
UNIPROTKB|B3MLA8	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.735	1e-22
UNIPROTKB|B4GSC0	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.735	1e-22
UNIPROTKB|B4N002	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.735	1e-22
UNIPROTKB|Q29KF5	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.735	1e-22
UNIPROTKB|B4JZG4	83	RpS21 "40S ribosomal protein S	0.931	0.819	0.720	7e-22

FB|FBgn0015521 RpS21 "Ribosomal protein S21" [Drosophila melanogaster (taxid:7227)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DGII KN+
Sbjct:    76 DGIITKNF 83

GO:0048542 "lymph gland development" evidence=IMP

GO:0006412 "translation" evidence=ISS

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IBA

GO:0005737 "cytoplasm" evidence=IDA

GO:0003735 "structural constituent of ribosome" evidence=ISS;IBA;IDA

GO:0005840 "ribosome" evidence=IDA

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0043022 "ribosome binding" evidence=IPI

GO:0042274 "ribosomal small subunit biogenesis" evidence=IBA

GO:0006414 "translational elongation" evidence=IBA

GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA

GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA

UNIPROTKB|B3NA78 RpS21 "40S ribosomal protein S21" [Drosophila erecta (taxid:7220)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DGII KN+
Sbjct:    76 DGIITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|B4I2S0 RpS21 "40S ribosomal protein S21" [Drosophila sechellia (taxid:7238)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DGII KN+
Sbjct:    76 DGIITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|Q6XIR2 RpS21 "40S ribosomal protein S21" [Drosophila yakuba (taxid:7245)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DGII KN+
Sbjct:    76 DGIITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|B4Q8M1 RpS21 "40S ribosomal protein S21" [Drosophila simulans (taxid:7240)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 51/68 (75%), Positives = 56/68 (82%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q+ I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLTIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DGII KN+
Sbjct:    76 DGIITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|B3MLA8 RpS21 "40S ribosomal protein S21" [Drosophila ananassae (taxid:7217)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DG+I KN+
Sbjct:    76 DGLITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|B4GSC0 RpS21 "40S ribosomal protein S21" [Drosophila persimilis (taxid:7234)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DG+I KN+
Sbjct:    76 DGLITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|B4N002 RpS21 "40S ribosomal protein S21" [Drosophila willistoni (taxid:7260)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DG+I KN+
Sbjct:    76 DGLITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|Q29KF5 RpS21 "40S ribosomal protein S21" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/68 (73%), Positives = 57/68 (83%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I DVDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DG+I KN+
Sbjct:    76 DGLITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

UNIPROTKB|B4JZG4 RpS21 "40S ribosomal protein S21" [Drosophila grimshawi (taxid:7222)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 49/68 (72%), Positives = 56/68 (82%)

Query:     6 RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
             + SASNRII AKDHAS+Q++I  VDP TGR TD  K YAICG+IRRMGESDDCI RLAK 
Sbjct:    16 KCSASNRIIHAKDHASVQLSIVVVDPETGRQTDGTKTYAICGEIRRMGESDDCIVRLAKK 75

Query:    66 DGIIAKNY 73
             DG+I KN+
Sbjct:    76 DGLITKNF 83

GO:0005840 "ribosome" evidence=ISS

GO:0042127 "regulation of cell proliferation" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3E902	RS212_ARATH	No assigned EC number	0.3939	0.8904	0.7926	yes	N/A
P0C0V8	RS21A_YEAST	No assigned EC number	0.4838	0.8493	0.7126	yes	N/A
P35687	RS21_ORYSJ	No assigned EC number	0.4406	0.7945	0.7073	yes	N/A
Q90YQ2	RS21_ICTPU	No assigned EC number	0.6716	0.9178	0.8072	N/A	N/A
Q32PB8	RS21_BOVIN	No assigned EC number	0.6764	0.9315	0.8192	yes	N/A
P05764	RS21_SCHPO	No assigned EC number	0.5538	0.8630	0.7241	yes	N/A
Q75BL6	RS21_ASHGO	No assigned EC number	0.4687	0.8767	0.7356	yes	N/A
Q6XIR2	RS21_DROYA	No assigned EC number	0.75	0.9315	0.8192	N/A	N/A
Q6DDC6	RS21_XENTR	No assigned EC number	0.6911	0.9315	0.8192	yes	N/A
Q6F477	RS21_PLUXY	No assigned EC number	0.7205	0.9315	0.8192	N/A	N/A
Q4WI01	RS21_ASPFU	No assigned EC number	0.5625	0.8630	0.7159	yes	N/A
Q4PM64	RS21_IXOSC	No assigned EC number	0.6911	0.9315	0.8192	N/A	N/A
Q3E754	RS21B_YEAST	No assigned EC number	0.4838	0.8493	0.7126	yes	N/A
Q54BN4	RS21_DICDI	No assigned EC number	0.4375	0.8630	0.8076	yes	N/A
Q6FMF8	RS21_CANGA	No assigned EC number	0.5	0.8493	0.7126	yes	N/A
B3MLA8	RS21_DROAN	No assigned EC number	0.7352	0.9315	0.8192	N/A	N/A
B4JZG4	RS21_DROGR	No assigned EC number	0.7205	0.9315	0.8192	N/A	N/A
Q9CQR2	RS21_MOUSE	No assigned EC number	0.6764	0.9315	0.8192	yes	N/A
B4GSC0	RS21_DROPE	No assigned EC number	0.7352	0.9315	0.8192	N/A	N/A
B4N002	RS21_DROWI	No assigned EC number	0.7352	0.9315	0.8192	N/A	N/A
Q7ZUG5	RS21_DANRE	No assigned EC number	0.6818	0.9041	0.8148	yes	N/A
Q29KF5	RS21_DROPS	No assigned EC number	0.7352	0.9315	0.8192	yes	N/A
Q6CXT6	RS21_KLULA	No assigned EC number	0.5	0.8493	0.7126	yes	N/A
Q962Q8	RS21_SPOFR	No assigned EC number	0.7352	0.9315	0.8192	N/A	N/A
P49197	RS21_CAEEL	No assigned EC number	0.5882	0.9178	0.7613	yes	N/A
Q8I7N7	RS21_CERCA	No assigned EC number	0.7058	0.9315	0.8192	N/A	N/A
P05765	RS21_RAT	No assigned EC number	0.6764	0.9315	0.8192	yes	N/A
B3NA78	RS21_DROER	No assigned EC number	0.75	0.9315	0.8192	N/A	N/A
Q6PUF8	RS21_BOMMO	No assigned EC number	0.7352	0.9315	0.8192	N/A	N/A
B4KIE3	RS21_DROMO	No assigned EC number	0.7205	0.9315	0.8192	N/A	N/A
B4Q8M1	RS21_DROSI	No assigned EC number	0.75	0.9315	0.8192	N/A	N/A
B4I2S0	RS21_DROSE	No assigned EC number	0.75	0.9315	0.8192	N/A	N/A
Q6AZJ9	RS21_XENLA	No assigned EC number	0.7058	0.9315	0.8192	N/A	N/A
O76927	RS21_DROME	No assigned EC number	0.75	0.9315	0.8192	yes	N/A
P63221	RS21_PIG	No assigned EC number	0.6764	0.9315	0.8192	yes	N/A
P63220	RS21_HUMAN	No assigned EC number	0.6764	0.9315	0.8192	yes	N/A
Q9M337	RS211_ARATH	No assigned EC number	0.3880	0.9041	0.8048	yes	N/A
Q4GXP2	RS21_BIPLU	No assigned EC number	0.7205	0.9315	0.8192	N/A	N/A
Q4GXP3	RS21_AGRLI	No assigned EC number	0.7205	0.9315	0.8192	N/A	N/A
B4LQD3	RS21_DROVI	No assigned EC number	0.7205	0.9315	0.8192	N/A	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	73
pfam01249	81	pfam01249, Ribosomal_S21e, Ribosomal protein S21e	2e-29

>gnl|CDD|189907 pfam01249, Ribosomal_S21e, Ribosomal protein S21e

 Score = 98.8 bits (247), Expect = 2e-29
 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 8  SASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDG 67
          SA+NRII AKDHAS+QI IADVD   GR T     YA+CG IRRMGESDD + RLA+ DG
Sbjct: 18 SATNRIIGAKDHASVQINIADVDE-NGRYTGEFTTYALCGYIRRMGESDDALNRLAQKDG 76

Query: 68 IIAKN 72
          ++  N
Sbjct: 77 LLPGN 81

Length = 81

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
PF01249	81	Ribosomal_S21e: Ribosomal protein S21e ; InterPro:	100.0
KOG3486|consensus	83		100.0
PF06079	291	Apyrase: Apyrase; InterPro: IPR009283 This family	86.0

>PF01249 Ribosomal_S21e: Ribosomal protein S21e ; InterPro: IPR001931 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=100.00  E-value=6e-49  Score=253.10  Aligned_cols=71  Identities=62%  Similarity=0.949  Sum_probs=66.6

Q ss_pred             CcccccccccCCccccCCcceeeeeeeeecCCCceeecCeeEEEEehhhhhcccchHHHHHHHHHcCccccC
Q psy16576          1 MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKN   72 (73)
Q Consensus         1 ~~iPRKCSaTnRiI~AkDHaSVQInva~vd~~~G~~tg~~~tyai~G~iR~~GesD~~lnrL~~~~g~~~~~   72 (73)
                      +|||||||||||||+|||||||||||++||| +|+|||+++||||||+||+|||||+||||||+++|++++|
T Consensus        11 lYiPRKCS~TnriI~aKDHaSvQinv~~vd~-~G~~~g~~~t~ai~G~iR~~GesD~~l~rL~~~~g~l~~~   81 (81)
T PF01249_consen   11 LYIPRKCSATNRIISAKDHASVQINVADVDE-NGRFTGQFKTYAICGFIRRMGESDDALNRLAKKDGLLSKN   81 (81)
T ss_dssp             SSHHHCHTTTHHCHHTTSTTSEEEEEEEE-S-SS-EEEEEEEEEEHHHHHHTTHHHHHHHHHHHHTCCCSS-
T ss_pred             EeccccccccCCccccCCceeEEEEeeeecC-cccCcCCceEEEEechHhhCcchhHHHHHHHHHhCcccCC
Confidence            5999999999999999999999999999997 5999999999999999999999999999999999999986

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. A number of eukaryotic ribosomal proteins can be grouped on the basis of sequence similarities. These proteins have 82 to 87 amino acids. The amino termini are all N alpha-acetylated. The N-terminal halves of the protein molecules are highly conserved in contrast to the carboxy-terminal parts [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 3U5G_V 3U5C_V 3IZB_T 2XZN_Z 2XZM_Z 3IZ6_T.

>KOG3486|consensus

Probab=100.00  E-value=1.4e-43  Score=229.20  Aligned_cols=73  Identities=49%  Similarity=0.786  Sum_probs=69.8

Q ss_pred             CcccccccccCCccccCCcceeeeeeeeecCCCceeecCeeEEEEehhhhhcccchHHHHHHHHHcCccccCC
Q psy16576          1 MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKNY   73 (73)
Q Consensus         1 ~~iPRKCSaTnRiI~AkDHaSVQInva~vd~~~G~~tg~~~tyai~G~iR~~GesD~~lnrL~~~~g~~~~~~   73 (73)
                      +|||||||+|||||.||||||||||+++||++-|.|+|+++||||||+||+|||||++++||+++||++++++
T Consensus        11 LYvPrKcS~sNriI~aKDHaSVQ~N~~~vd~~g~~~~g~~ttyAlcg~vr~~gesd~~~~rl~~~~~~~~~~~   83 (83)
T KOG3486|consen   11 LYVPRKCSATNRIITAKDHASVQLNIGHVDAEGGLYTGQFTTYALCGFVRRMGESDSGVDRLAQKDGVEAKQW   83 (83)
T ss_pred             EEecccccccceeeecccchheeecccccccccCccCCceehHHHHHHHHHcCCCcchHHHHHHhcccccccC
Confidence            5999999999999999999999999999998757799999999999999999999999999999999998875

>PF06079 Apyrase: Apyrase; InterPro: IPR009283 This family consists of several eukaryotic apyrase (or adenosine diphosphatase) proteins (3

Probab=86.00  E-value=0.28  Score=38.02  Aligned_cols=33  Identities=33%  Similarity=0.573  Sum_probs=18.4

Q ss_pred             ccccccc------------ccCCcccc-CCcceeeee-ee-eecCCCc
Q psy16576          2 VSLTRSS------------ASNRIIAA-KDHASIQIA-IA-DVDPATG   34 (73)
Q Consensus         2 ~iPRKCS------------aTnRiI~A-kDHaSVQIn-va-~vd~~~G   34 (73)
                      ++||+||            .||-||.| .|..+|+.. |+ .++|..|
T Consensus       186 FLPRr~S~e~Y~e~~DE~~G~N~li~a~edF~~i~v~~ig~~~~p~~G  233 (291)
T PF06079_consen  186 FLPRRCSKEPYDETADERRGCNLLISADEDFSDIKVIRIGEQLDPTRG  233 (291)
T ss_dssp             E--SEEESS---HHHHTT-B--EEEEE-TTSSSEEEEE-S----TTEE
T ss_pred             EeccccccccccchhhhhcCccEEEEeccCcceeEEEEeCCccCcccc
Confidence            5899999            68999988 566777643 66 7888555

6.1.5 from EC), and related nucleoside diphosphatases (3.6.1.6 from EC). The salivary apyrases of blood-feeding arthropods are nucleotide hydrolysing enzymes implicated in the inhibition of host platelet aggregation through the hydrolysis of extracellular adenosine diphosphate [].; GO: 0005509 calcium ion binding, 0016462 pyrophosphatase activity; PDB: 2H2N_A 1S18_A 2H2U_A 1S1D_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	73
3izb_T	87	Localization Of The Small Subunit Ribosomal Protein		9e-11
3iz6_T	82	Localization Of The Small Subunit Ribosomal Protein		1e-06
3zey_R	194	High-resolution Cryo-electron Microscopy Structure		2e-05
2xzm_Z	97	Crystal Structure Of The Eukaryotic 40s Ribosomal S		9e-04

>pdb|3IZB|T Chain T, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 87

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 8  SASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDG 67
          SA+NRII A DHAS+QI +A VD            YA+ G +R  GESDD + RLA++DG
Sbjct: 18 SATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRGESDDSLNRLAQNDG 77
Query: 68 II 69
          ++
Sbjct: 78 LL 79

>pdb|3IZ6|T Chain T, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 82

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAK 64
          + SA+NRII AKDHAS+QI I  VD   G        +A+ G IR  G++D  + RL +
Sbjct: 16 KCSATNRIITAKDHASVQINIGHVDE-NGLYDGRFTTFALSGFIRAQGDADSALDRLWQ 73

>pdb|3ZEY|R Chain R, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 194

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 9  ASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGI 68
          A+N +I + DH+++QIAIA+VDP  G          I G +R  GESD  I  LA   GI
Sbjct: 24 ATNSLITSFDHSAVQIAIANVDP-NGVIDGTTTTLCIAGYLRCQGESDHAINHLAIAKGI 82
Query: 69 I 69
          +
Sbjct: 83 V 83

>pdb|2XZM|Z Chain Z, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 97

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 SNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGI 68
          SN++I + D +S+QIAIA+V    G+ T +     +CG +R  GE+   +  + ++ G+
Sbjct: 35 SNKLIFSNDQSSVQIAIAEVG-ENGQATGSKTNVVLCGSVRSKGEAHIALENILRERGL 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	73
3u5c_V	87	S26, YS25, 40S ribosomal protein S21-A; translatio	5e-29
2xzm_Z	97	RPS21E; ribosome, translation; 3.93A {Tetrahymena	2e-26
3iz6_T	82	40S ribosomal protein S21 (S21E); eukaryotic ribos	4e-26

>3u5c_V S26, YS25, 40S ribosomal protein S21-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_T 3u5g_V Length = 87

 Score = 97.6 bits (243), Expect = 5e-29
 Identities = 30/68 (44%), Positives = 42/68 (61%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SA+NRII A DHAS+QI +A VD            YA+ G +R  GESDD + RLA++
Sbjct: 16 KCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRGESDDSLNRLAQN 75

Query: 66 DGIIAKNY 73
          DG++   +
Sbjct: 76 DGLLKNVW 83

>2xzm_Z RPS21E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_Z Length = 97

 Score = 91.5 bits (227), Expect = 2e-26
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 8  SASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDG 67
            SN++I + D +S+QIAIA+V    G+ T +     +CG +R  GE+   +  + ++ G
Sbjct: 33 DWSNKLIFSNDQSSVQIAIAEVGE-NGQATGSKTNVVLCGSVRSKGEAHIALENILRERG 91

Query: 68 IIAK 71
          +   
Sbjct: 92 LYPI 95

>3iz6_T 40S ribosomal protein S21 (S21E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 82

 Score = 89.9 bits (223), Expect = 4e-26
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 6  RSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKD 65
          + SA+NRII AKDHAS+QI I  VD   G        +A+ G IR  G++D  + RL + 
Sbjct: 16 KCSATNRIITAKDHASVQINIGHVDE-NGLYDGRFTTFALSGFIRAQGDADSALDRLWQK 74

Query: 66 DGIIAK 71
               K
Sbjct: 75 RKAEVK 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
3u5c_V	87	S26, YS25, 40S ribosomal protein S21-A; translatio	100.0
2xzm_Z	97	RPS21E; ribosome, translation; 3.93A {Tetrahymena	100.0
3iz6_T	82	40S ribosomal protein S21 (S21E); eukaryotic ribos	100.0
1s1d_A	331	Apyrase; adpase, five-blade beta propeller, calciu	81.55

>3u5c_V S26, YS25, 40S ribosomal protein S21-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_T 3u5g_V

Probab=100.00  E-value=1e-49  Score=258.78  Aligned_cols=72  Identities=44%  Similarity=0.732  Sum_probs=70.0

Q ss_pred             CcccccccccCCccccCCcceeeeeeeeecCCCcee-ecCeeEEEEehhhhhcccchHHHHHHHHHcCccccCC
Q psy16576          1 MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRT-TDNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAKNY   73 (73)
Q Consensus         1 ~~iPRKCSaTnRiI~AkDHaSVQInva~vd~~~G~~-tg~~~tyai~G~iR~~GesD~~lnrL~~~~g~~~~~~   73 (73)
                      +|||||||||||||+|||||||||||++||+ +|+| ||+++||||||+||+|||||+||||||+++|++++++
T Consensus        11 LYiPRKCSaTNriI~AKDHaSVQIni~~vd~-~G~~i~g~~~tyai~G~iR~~GesD~~l~rLa~~~g~l~~~~   83 (87)
T 3u5c_V           11 LYVPRKCSATNRIIKADDHASVQINVAKVDE-EGRAIPGEYVTYALSGYVRSRGESDDSLNRLAQNDGLLKNVW   83 (87)
T ss_dssp             SCCCCCCTTTCCCCCTTCTTCEEEEEECCCS-SSCCCSSCEEEEEECHHHHHTTCHHHHHHHHHHTTTSCCSSC
T ss_pred             EEccccccccCCceecCCcceEEEeeeeECC-cccEeCCCeeEEEEehhhhhCcchHHHHHHHHHHcCcccccc
Confidence            5999999999999999999999999999996 7999 9999999999999999999999999999999999885

>2xzm_Z RPS21E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_Z

Probab=100.00  E-value=6e-47  Score=249.73  Aligned_cols=69  Identities=28%  Similarity=0.515  Sum_probs=66.9

Q ss_pred             CcccccccccCCccccCCcceeeeeeeeecCCCceee-cCeeEEEEehhhhhcccchHHHHHHHHHcCcccc
Q psy16576          1 MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTT-DNLKMYAICGQIRRMGESDDCIGRLAKDDGIIAK   71 (73)
Q Consensus         1 ~~iPRKCSaTnRiI~AkDHaSVQInva~vd~~~G~~t-g~~~tyai~G~iR~~GesD~~lnrL~~~~g~~~~   71 (73)
                      +|||||||||||||+|||||||||||++||| +|+|+ |+++|| |||+||+|||||+||||||+++|++++
T Consensus        26 LYiPRKCSaTNRiI~AKDHaSVQInIa~vd~-~G~~~~g~~~ty-icG~iR~~GesDdal~rL~~~~g~l~~   95 (97)
T 2xzm_Z           26 AYLPRKCDWSNKLIFSNDQSSVQIAIAEVGE-NGQATGSKTNVV-LCGSVRSKGEAHIALENILRERGLYPI   95 (97)
T ss_dssp             SSCCCBCTTTCCBCCSSCTTCEEEEEEEECS-SSCEEEEEEEEE-ECHHHHHTTCHHHHHHHHHHHTTCSSC
T ss_pred             EeccccccccCCccccCCceeEEEEhhhcCc-cccccCCCceEE-EechhhcCcchHHHHHHHHHHcCCccc
Confidence            5999999999999999999999999999997 49999 999999 999999999999999999999999975

>3iz6_T 40S ribosomal protein S21 (S21E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=9e-48  Score=247.46  Aligned_cols=68  Identities=38%  Similarity=0.565  Sum_probs=65.1

Q ss_pred             CcccccccccCCccccCCcceeeeeeeeecCCCceeecCeeEEEEehhhhhcccchHHHHHHHHHcCcc
Q psy16576          1 MVSLTRSSASNRIIAAKDHASIQIAIADVDPATGRTTDNLKMYAICGQIRRMGESDDCIGRLAKDDGII   69 (73)
Q Consensus         1 ~~iPRKCSaTnRiI~AkDHaSVQInva~vd~~~G~~tg~~~tyai~G~iR~~GesD~~lnrL~~~~g~~   69 (73)
                      +|||||||||||||+|||||||||||++|| ++|+|||+++||||||+||+|||||+||||||++++.+
T Consensus        11 LYiPRKCSaTNriI~AKDHaSVQInv~~vd-~~G~~~g~~~tyai~G~iR~~GesD~~l~rL~~~~~~~   78 (82)
T 3iz6_T           11 LYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAE   78 (82)
T ss_dssp             CHHHHHHHHHHHHHHTTSSSSCCCCCEEEC-SSSCEEEECCCCSCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             EeccccccccCCccccCCceeEEEEEEEEc-CCccCCCCeeEEEEehhhhhCcchHHHHHHHHHHhhhh
Confidence            599999999999999999999999999999 69999999999999999999999999999999877643

>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A

Probab=81.55  E-value=0.4  Score=36.78  Aligned_cols=33  Identities=27%  Similarity=0.458  Sum_probs=25.0

Q ss_pred             cccccccc------------cCCccccC-Ccceeee-eeeeecCCCc
Q psy16576          2 VSLTRSSA------------SNRIIAAK-DHASIQI-AIADVDPATG   34 (73)
Q Consensus         2 ~iPRKCSa------------TnRiI~Ak-DHaSVQI-nva~vd~~~G   34 (73)
                      ++|||||-            +|-||.|. |..+|++ .|+.++|..|
T Consensus       227 FLPRr~S~e~Yde~~DE~~G~N~li~a~edF~~i~v~~i~~~~p~~G  273 (331)
T 1s1d_A          227 FLPRRASQERYSEKDDERKGANLLLSASPDFGDIAVSHVGAVVPTHG  273 (331)
T ss_dssp             ECCSEEESSCCCHHHHTTCBCCEEEEECTTSSCEEEEECSCCCTTEE
T ss_pred             EeccccCcCcccchhhhhcCccEEEEecCCcceeEEEEcCCCCCccc
Confidence            58999995            78888866 7788875 4777787445

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	73
d1s1da_	317	Soluble calcium-activated nucleotidase SCAN-1 {Hum	90.38
d1f97a2	110	Junction adhesion molecule, JAM, C-terminal domain	86.29

>d1s1da_ b.67.3.1 (A:) Soluble calcium-activated nucleotidase SCAN-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 5-bladed beta-propeller
superfamily: Apyrase
family: Apyrase
domain: Soluble calcium-activated nucleotidase SCAN-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.38  E-value=0.033  Score=40.73  Aligned_cols=33  Identities=27%  Similarity=0.408  Sum_probs=25.9

Q ss_pred             ccccccc------------ccCCcccc-CCcceee-eeeeeecCCCc
Q psy16576          2 VSLTRSS------------ASNRIIAA-KDHASIQ-IAIADVDPATG   34 (73)
Q Consensus         2 ~iPRKCS------------aTnRiI~A-kDHaSVQ-Inva~vd~~~G   34 (73)
                      ++|||||            .+|-||.+ .|...++ |.|+.++|..|
T Consensus       213 FlPRr~S~e~Y~e~~DE~~G~N~li~~~e~F~~i~vi~ig~~~p~~G  259 (317)
T d1s1da_         213 FLPRRASQERYSEKDDERKGANLLLSASPDFGDIAVSHVGAVVPTHG  259 (317)
T ss_dssp             ECCSEEESSCCCHHHHTTCBCCEEEEECTTSSCEEEEECSCCCTTEE
T ss_pred             EechhhccccCCchhhhhcCCcEEEEecCCCceeEEEEcCCcCCCcc
Confidence            5899999            68999997 5667777 56788888555

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.29  E-value=0.11  Score=29.11  Aligned_cols=28  Identities=14%  Similarity=0.182  Sum_probs=22.7

Q ss_pred             cccccCCccccCCcceeeeeeeeecCCCc
Q psy16576          6 RSSASNRIIAAKDHASIQIAIADVDPATG   34 (73)
Q Consensus         6 KCSaTnRiI~AkDHaSVQInva~vd~~~G   34 (73)
                      .|.|+|..=.+.-.++|+|+|-+|| +.|
T Consensus        83 ~C~a~N~~G~~~~s~~v~l~V~~l~-~~g  110 (110)
T d1f97a2          83 YCQAQNGYGTAMRSEAAHMDAVELN-VGG  110 (110)
T ss_dssp             EEEEECSSSCCEECCCEEEEEESSC-SCC
T ss_pred             EEEEEECCCcEEEEEEEEEEEEecC-CCC
Confidence            6999998866666678999999998 465