Psyllid ID: psy16751

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
FKSIFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccccccccHHHccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccHHHHHccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccccccccccHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccEHHcccccccEEEHcEEccEccccccccHHHccccEEEEcHcHHHHcEEccEccccccccHHHccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccEccEcHHHHHHHHHHHHHccccHHHHHHcccHHHHEcccccEcccccccEccHHHHHHHcccccHHHHHHHHHHHcccccccccccEcHHHHHccHHHcc
Coil and Loop (DISEMBL)
FKSIFNFFVAFGSLEETDKKRRLYIRNacwvdkhftedvqtrqyrslppflfdigtyrnacwvdkhftedvQTRQYRSLEVLINAGYDCSADIWSVACMAFELAtgdylfephagdtytrdEDHLAHIIELLGDipkriiqsghrssefftkkgelrhipglkpwdLYSVLVEKynwtpesarGFSEFlrpmlaydpkLRATAADclqhpwlqn
Flexible Loop (DISEMBL)
fksifnffvafgsleetdkkRRLYIRNacwvdkhftedvqtrqyrsLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRssefftkkgelrhipglkPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Low Complexity Region (SEG)
FKSIFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Disordered region (IsUnstruct)
***IFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW***
Disordered Region (DISOPRED)
*KSIFNFFVAFGSLEET*K******************************FLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPW*************PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Disordered Region (DISEMBL)
FKSIFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Disordered Region (DISPRO)
FKSIFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
FKSIFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q96SB4	655	SRSF protein kinase 1 OS=	yes	N/A	0.752	0.245	0.683	4e-64
Q5RD27	655	SRSF protein kinase 1 OS=	yes	N/A	0.752	0.245	0.683	4e-64
O70551	648	SRSF protein kinase 1 OS=	yes	N/A	0.752	0.248	0.683	4e-63
Q9Z0G2	565	SRSF protein kinase 3 OS=	no	N/A	0.757	0.286	0.672	4e-61
P78362	688	SRSF protein kinase 2 OS=	no	N/A	0.752	0.234	0.664	1e-60
O54781	681	SRSF protein kinase 2 OS=	no	N/A	0.752	0.236	0.664	1e-60
Q9UPE1	567	SRSF protein kinase 3 OS=	no	N/A	0.757	0.285	0.666	8e-60
B8Y466	566	SRSF protein kinase 3 OS=	no	N/A	0.757	0.286	0.660	6e-59
Q61IS6	1132	Serine/threonine-protein	N/A	N/A	0.742	0.140	0.635	3e-55
Q03563	1003	Serine/threonine-protein	yes	N/A	0.742	0.158	0.628	1e-54

>sp|Q96SB4|SRPK1_HUMAN SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2

 Score =  244 bits (622), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 131/161 (81%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEPH
Sbjct: 495 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 554

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLVE
Sbjct: 555 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 614

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct: 615 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Isoform 2 phosphorylates SFRS2, ZRSR2, LBR and PRM1. Isoform 2 phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Isoform 2 can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Isoform 1 and isoform 2 can induce splicing of exon 10 in MAPT/TAU. The ratio of isoform 1/isoform 2 plays a decisive role in determining cell fate in K562 leukaemic cell line: isoform 2 favors proliferation where as isoform 1 favors differentiation.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q5RD27|SRPK1_PONAB SRSF protein kinase 1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2

 Score =  244 bits (622), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 131/161 (81%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEPH
Sbjct: 495 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 554

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLVE
Sbjct: 555 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 614

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct: 615 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O70551|SRPK1_MOUSE SRSF protein kinase 1 OS=Mus musculus GN=Srpk1 PE=1 SV=2

 Score =  240 bits (613), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 129/161 (80%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEPH
Sbjct: 488 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 547

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L  VLVE
Sbjct: 548 SGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVE 607

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W  E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct: 608 KYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 648

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z0G2|SRPK3_MOUSE SRSF protein kinase 3 OS=Mus musculus GN=Srpk3 PE=2 SV=1

 Score =  234 bits (596), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 109/162 (67%), Positives = 123/162 (75%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
             I    NACWV KHFTED+QTRQYR++EVLI A Y   ADIWS ACMAFELATGDYLFE
Sbjct: 403 IKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELATGDYLFE 462

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           PH+G+ Y+RDEDH+AHI+ELLGDIP     SG  S EFF ++GELRHIP LK W LY VL
Sbjct: 463 PHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIPNLKHWGLYEVL 522

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +EKY W  E A  FS FL PM+ Y P+ RA+AADCLQHPWL 
Sbjct: 523 MEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P78362|SRPK2_HUMAN SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3

 Score =  232 bits (592), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/161 (66%), Positives = 124/161 (77%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRS+EVLI AGY   ADIWS ACMAFELATGDYLFEPH
Sbjct: 528 IADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPH 587

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ Y+RDEDH+AHIIELLG IP+    SG  S EFF ++GELRHI  LKPW L+ VLVE
Sbjct: 588 SGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVE 647

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W  E A  F++FL PML   P+ RA+A +CL+HPWL +
Sbjct: 648 KYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 688

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Can mediate hepatitis B virus (HBV) core protein phosphorylation. Plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O54781|SRPK2_MOUSE SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2

 Score =  232 bits (592), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/161 (66%), Positives = 124/161 (77%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRS+EVLI AGY   ADIWS ACMAFELATGDYLFEPH
Sbjct: 521 IADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPH 580

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ Y+RDEDH+AHIIELLG IP+    SG  S EFF ++GELRHI  LKPW L+ VLVE
Sbjct: 581 SGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVE 640

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W  E A  F++FL PML   P+ RA+A +CL+HPWL +
Sbjct: 641 KYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 681

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UPE1|SRPK3_HUMAN SRSF protein kinase 3 OS=Homo sapiens GN=SRPK3 PE=2 SV=2

 Score =  229 bits (585), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 108/162 (66%), Positives = 122/162 (75%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
             I    NACWV KHFTED+QTRQYR++EVLI A Y   ADIWS ACMAFELATGDYLFE
Sbjct: 405 IKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELATGDYLFE 464

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           PH+G+ Y+RDEDH+AHI+ELLGDIP     SG  S EFF ++GELRHI  LK W LY VL
Sbjct: 465 PHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYEVL 524

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +EKY W  E A  FS FL PM+ Y P+ RA+AADCLQHPWL 
Sbjct: 525 MEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 566

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B8Y466|SRPK3_PIG SRSF protein kinase 3 OS=Sus scrofa GN=SRPK3 PE=2 SV=1

 Score =  226 bits (577), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 107/162 (66%), Positives = 121/162 (74%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
             I    NACWV KHFTE +QTRQYR++EVLI A Y   ADIWS ACMAFELATGDYLFE
Sbjct: 404 IKIADLGNACWVHKHFTEGIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELATGDYLFE 463

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           PH+G+ Y+RDEDH+AHI+ELLGDIP     SG  S EFF ++GELRHI  LK W LY VL
Sbjct: 464 PHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYEVL 523

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +EKY W  E A  FS FL PM+ Y P+ RA+AADCLQHPWL 
Sbjct: 524 MEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 565

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61IS6|SPK1_CAEBR Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=2

 Score =  214 bits (545), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/159 (63%), Positives = 116/159 (72%)

Query: 54   IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
            I    NACWV+ H+T+D+QTRQYR+LEVLI +GY   ADIWS ACMAFELATGDYLFEPH
Sbjct: 886  IADLGNACWVNHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPH 945

Query: 114  AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
             GD Y+RDEDHLAHI ELLG I   I + G    EFF K G L HI  LKPW LY VL +
Sbjct: 946  QGDNYSRDEDHLAHISELLGQISPSIYKKGKHWREFFHKNGNLLHIHNLKPWSLYEVLRQ 1005

Query: 174  KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            KY W+ E A+ F  FLRPML +D + RATA D L+HP+L
Sbjct: 1006 KYEWSHEDAQQFESFLRPMLDFDQEKRATANDALKHPFL 1044

Required for embryogenesis and germline development in both adult hermaphrodites and males. SR-protein kinase (SRPK) that binds directly to and phosphorylates RS domains.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q03563|SPK1_CAEEL Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=2 SV=3

 Score =  212 bits (540), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/159 (62%), Positives = 116/159 (72%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV+ H+T+D+QTRQYR+LEVLI +GY   ADIWS ACMAFELATGDYLFEPH
Sbjct: 746 IADLGNACWVNHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPH 805

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
            GD Y+RDEDHLAHI ELLG IP  I + G    EFF K G L HI  LKPW LY VL +
Sbjct: 806 QGDNYSRDEDHLAHISELLGAIPPSIYKKGKHWREFFHKNGHLLHIHQLKPWSLYEVLRQ 865

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           KY W+ E A+ F  FLRPML +D + R+TA   L+HP+L
Sbjct: 866 KYEWSHEDAQQFESFLRPMLDFDQEKRSTAKIALKHPFL 904

Required for embryogenesis and germline development in both adult hermaphrodites and males. SR-protein kinase (SRPK) that binds directly to and phosphorylates the RS domain of rsp-3/CeSF2 in vitro.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
307187517	643	Serine/threonine-protein kinase SRPK1 [C	0.747	0.248	0.718	4e-66
383853273	816	PREDICTED: SRSF protein kinase 3-like [M	0.747	0.196	0.712	4e-65
357608413	602	putative Serine/threonine-protein kinase	0.747	0.265	0.731	6e-65
322798702	663	hypothetical protein SINV_03865 [Solenop	0.780	0.251	0.676	7e-65
332019252	675	Serine/threonine-protein kinase SRPK1 [A	0.747	0.237	0.712	9e-65
345496213	683	PREDICTED: serine/threonine-protein kina	0.780	0.244	0.682	2e-64
307213496	636	Serine/threonine-protein kinase SRPK1 [H	0.747	0.251	0.706	2e-64
350406251	638	PREDICTED: serine/threonine-protein kina	0.747	0.250	0.7	5e-64
340716349	638	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.747	0.250	0.7	6e-64
194882835	767	GG20515 [Drosophila erecta] gi|190658702	0.747	0.208	0.680	1e-63

>gi|307187517|gb|EFN72568.1| Serine/threonine-protein kinase SRPK1 [Camponotus floridanus]

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 115/160 (71%), Positives = 131/160 (81%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV K FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMAFELATGDYLFEPH
Sbjct: 481 IADLGNACWVHKKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMAFELATGDYLFEPH 540

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G  Y RDEDHLAHIIELLG+IP+RI  SG  S  +F KKGEL+HI GLKPW LY VL E
Sbjct: 541 SGKDYCRDEDHLAHIIELLGEIPRRIALSGKNSKIYFNKKGELKHITGLKPWGLYEVLTE 600

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY+WTP  AR F+EFL PML ++P +RATAA+CL+HPWLQ
Sbjct: 601 KYDWTPSEAREFAEFLTPMLEFNPSMRATAAECLKHPWLQ 640

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853273|ref|XP_003702147.1| PREDICTED: SRSF protein kinase 3-like [Megachile rotundata]

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 114/160 (71%), Positives = 129/160 (80%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV K FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMAFELATGDYLFEPH
Sbjct: 654 IADLGNACWVHKKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMAFELATGDYLFEPH 713

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ Y RDEDHLAHIIELLG+IP+ I  SG  S  +F KKGELR I GLKPW LY VL E
Sbjct: 714 SGNYYCRDEDHLAHIIELLGEIPRHIALSGKNSKAYFNKKGELRRITGLKPWGLYEVLTE 773

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY+W+P  AR F EFL PML +DP +RATAA+CL+HPWLQ
Sbjct: 774 KYDWSPREAREFEEFLTPMLEFDPSMRATAAECLKHPWLQ 813

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357608413|gb|EHJ65991.1| putative Serine/threonine-protein kinase 23 [Danaus plexippus]

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 117/160 (73%), Positives = 130/160 (81%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV +HFTED+QTRQYRSLEVL++AGY  SADIWS ACMAFELATGDYLFEPH
Sbjct: 432 IADLGNACWVHRHFTEDIQTRQYRSLEVLLSAGYGTSADIWSTACMAFELATGDYLFEPH 491

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +GD Y+RDEDHLAHIIELLGDIPKRI  SG  S  FF KKGELR+I GLKPW L SVL E
Sbjct: 492 SGDGYSRDEDHLAHIIELLGDIPKRIAGSGKYSKIFFNKKGELRNITGLKPWGLVSVLTE 551

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY W+ + A  F+EFL+PML +DP  RATA +CLQH WLQ
Sbjct: 552 KYEWSQKDAEEFAEFLKPMLDFDPNRRATAYECLQHSWLQ 591

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798702|gb|EFZ20300.1| hypothetical protein SINV_03865 [Solenopsis invicta]

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 133/173 (76%), Gaps = 6/173 (3%)

Query: 47  LPPFLFD------IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMA 100
           L P + D      I    NACWV K FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMA
Sbjct: 488 LDPAIMDCEIEVKIADLGNACWVHKKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMA 547

Query: 101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP 160
           FELATGDYLFEPH G  Y RDEDHLAHIIELLG+IP+RI  SG  S  +F +KGEL+HI 
Sbjct: 548 FELATGDYLFEPHNGKDYCRDEDHLAHIIELLGEIPRRIALSGKNSRIYFNRKGELKHIT 607

Query: 161 GLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           GLKPW LY VL EKY WTP  AR F+EFL PML ++P +RATAA+CL+HPWLQ
Sbjct: 608 GLKPWGLYEVLTEKYEWTPSEAREFAEFLIPMLEFNPSMRATAAECLKHPWLQ 660

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019252|gb|EGI59761.1| Serine/threonine-protein kinase SRPK1 [Acromyrmex echinatior]

 Score =  251 bits (642), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 114/160 (71%), Positives = 129/160 (80%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV K FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMAFELATGDYLFEPH
Sbjct: 513 IADLGNACWVHKKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMAFELATGDYLFEPH 572

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
            G  Y RDEDHLAHIIELLG+IP+RI  SG  S  +F +KGEL+HI GLKPW LY VL E
Sbjct: 573 NGKDYCRDEDHLAHIIELLGEIPRRIALSGKNSRIYFNRKGELKHITGLKPWGLYEVLTE 632

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY WTP  AR F+EFL PML ++P +RATAA+CL+HPWLQ
Sbjct: 633 KYEWTPSEAREFAEFLIPMLEFNPSMRATAAECLKHPWLQ 672

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496213|ref|XP_001603772.2| PREDICTED: serine/threonine-protein kinase SRPK2-like [Nasonia vitripennis]

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 118/173 (68%), Positives = 131/173 (75%), Gaps = 6/173 (3%)

Query: 47  LPPFLFD------IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMA 100
           L P L D      I    NACWV K FTED+QTRQYRSLEVL+ AGY  SADIWS ACMA
Sbjct: 482 LDPALVDCDVEVKIADLGNACWVHKKFTEDIQTRQYRSLEVLLGAGYSTSADIWSTACMA 541

Query: 101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP 160
           FELATGDYLFEPH+G+ Y RDEDHLAHIIELLG+IP+ I  SG  S  FF KKGEL+HI 
Sbjct: 542 FELATGDYLFEPHSGEDYCRDEDHLAHIIELLGEIPRSIALSGRHSRTFFNKKGELKHIT 601

Query: 161 GLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           GLKPW LY VL EKY W+P  AR F++FL PML +DP  RATAA+CL+H WLQ
Sbjct: 602 GLKPWGLYEVLTEKYEWSPSDAREFADFLTPMLKFDPDTRATAAECLKHSWLQ 654

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213496|gb|EFN88905.1| Serine/threonine-protein kinase SRPK1 [Harpegnathos saltator]

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/160 (70%), Positives = 129/160 (80%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV K FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMAFELATGDYLFEPH
Sbjct: 474 IADLGNACWVHKKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMAFELATGDYLFEPH 533

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G  Y RDEDHLAHIIELLG+IP+RI  +G  S  +F KKGEL+HI  LKPW LY VL E
Sbjct: 534 SGKDYCRDEDHLAHIIELLGEIPRRIALAGKNSKIYFNKKGELKHITVLKPWGLYEVLTE 593

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY WTP  AR F+EFL PML ++P +RATAA+CL+HPWLQ
Sbjct: 594 KYEWTPSEAREFAEFLTPMLEFNPLMRATAAECLKHPWLQ 633

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406251|ref|XP_003487708.1| PREDICTED: serine/threonine-protein kinase SRPK3-like [Bombus impatiens]

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 130/160 (81%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV + FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMAFELATGDYLFEPH
Sbjct: 476 IADLGNACWVYRKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMAFELATGDYLFEPH 535

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ Y RDEDHLAHIIELLG+IP+ I  SG  S  +F KKGEL+ I GLKPW LY VL E
Sbjct: 536 SGNYYCRDEDHLAHIIELLGEIPRHIALSGKNSKMYFNKKGELKRITGLKPWGLYEVLTE 595

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY+W+P  AR F EFL PMLA+DP +RATAA+CL+HPWL+
Sbjct: 596 KYDWSPREAREFEEFLTPMLAFDPSMRATAAECLKHPWLK 635

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716349|ref|XP_003396661.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase SRPK1-like [Bombus terrestris]

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 130/160 (81%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV + FT+D+QTRQYRSLEVL+ +GYD SADIWS ACMAFELATGDYLFEPH
Sbjct: 476 IADLGNACWVYRKFTDDIQTRQYRSLEVLLGSGYDTSADIWSTACMAFELATGDYLFEPH 535

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ Y RDEDHLAHIIELLG+IP+ I  SG  S  +F KKGEL+ I GLKPW LY VL E
Sbjct: 536 SGNYYCRDEDHLAHIIELLGEIPRHIALSGKNSKMYFNKKGELKRITGLKPWGLYEVLTE 595

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           KY+W+P  AR F EFL PMLA+DP +RATAA+CL+HPWL+
Sbjct: 596 KYDWSPREAREFEEFLTPMLAFDPSMRATAAECLKHPWLK 635

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194882835|ref|XP_001975515.1| GG20515 [Drosophila erecta] gi|190658702|gb|EDV55915.1| GG20515 [Drosophila erecta]

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 111/163 (68%), Positives = 135/163 (82%), Gaps = 3/163 (1%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D+G   NACWVD+HFTED+QTRQYRSLEV++ AGY  SADIWS ACM FELATGDYLF
Sbjct: 608 IADLG---NACWVDRHFTEDIQTRQYRSLEVILGAGYGTSADIWSTACMVFELATGDYLF 664

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
           EPH+G+TY+RDEDHLAHIIELLG IP++I+ SG  + + FT+ G+LR+I GLKPWDL  V
Sbjct: 665 EPHSGETYSRDEDHLAHIIELLGPIPRQIVFSGTYAPKSFTRGGDLRNISGLKPWDLMDV 724

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           L+EKY W+   A  F+ FL+PML +DPK RATAA+CLQHPWL+
Sbjct: 725 LLEKYEWSQSEAASFASFLKPMLEFDPKKRATAAECLQHPWLR 767

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
UNIPROTKB|B7UCT2	655	SRPK1 "SFRS protein kinase 1"	0.742	0.242	0.691	1.5e-60
UNIPROTKB|E1BNV4	639	SRPK1 "Uncharacterized protein	0.742	0.248	0.691	2.4e-60
UNIPROTKB|E2RL63	909	SRPK1 "Uncharacterized protein	0.742	0.174	0.691	3e-60
UNIPROTKB|B4DS61	639	SRPK1 "SFRS protein kinase 1,	0.742	0.248	0.685	3.9e-60
UNIPROTKB|H3BLV9	671	SRPK1 "SRSF protein kinase 1"	0.742	0.236	0.685	3.9e-60
UNIPROTKB|Q96SB4	655	SRPK1 "SRSF protein kinase 1"	0.742	0.242	0.685	3.9e-60
UNIPROTKB|Q5RD27	655	SRPK1 "SRSF protein kinase 1"	0.742	0.242	0.685	3.9e-60
UNIPROTKB|E9PTN4	655	Srpk1 "Protein Srpk1" [Rattus	0.827	0.270	0.627	6.4e-60
MGI|MGI:106908	648	Srpk1 "serine/arginine-rich pr	0.742	0.245	0.685	1.7e-59
RGD|1308272	655	Srpk1 "SRSF protein kinase 1"	0.742	0.242	0.685	1.7e-59

UNIPROTKB|B7UCT2 SRPK1 "SFRS protein kinase 1" [Sus scrofa (taxid:9823)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 112/162 (69%), Positives = 133/162 (82%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   497 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 553

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   554 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 613

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W+ E A GF++FL PML   P+ RATAADCL+HPWL +
Sbjct:   614 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAADCLRHPWLNS 655

GO:0050684 "regulation of mRNA processing" evidence=IEA

GO:0045071 "negative regulation of viral genome replication" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E1BNV4 SRPK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 112/162 (69%), Positives = 132/162 (81%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   481 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 537

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   538 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 597

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W  E A GF++FL PML   P+ RATAADCL+HPWL +
Sbjct:   598 EKYEWPQEEAAGFTDFLLPMLELIPEKRATAADCLRHPWLNS 639

GO:0050684 "regulation of mRNA processing" evidence=IEA

GO:0045071 "negative regulation of viral genome replication" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E2RL63 SRPK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 620 (223.3 bits), Expect = 3.0e-60, P = 3.0e-60
 Identities = 112/162 (69%), Positives = 133/162 (82%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   751 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 807

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   808 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 867

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W+ E A GF++FL PML   P+ RATAADCL+HPWL +
Sbjct:   868 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAADCLRHPWLNS 909

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B4DS61 SRPK1 "SFRS protein kinase 1, isoform CRA_f" [Homo sapiens (taxid:9606)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 111/162 (68%), Positives = 133/162 (82%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   481 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 537

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   538 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 597

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   598 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 639

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|H3BLV9 SRPK1 "SRSF protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 111/162 (68%), Positives = 133/162 (82%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   513 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 569

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   570 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 629

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   630 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 671

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q96SB4 SRPK1 "SRSF protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 111/162 (68%), Positives = 133/162 (82%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   497 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 553

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   554 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 613

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   614 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0050684 "regulation of mRNA processing" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0048024 "regulation of mRNA splicing, via spliceosome" evidence=TAS

GO:0035092 "sperm chromatin condensation" evidence=TAS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0045087 "innate immune response" evidence=IC

GO:0045071 "negative regulation of viral genome replication" evidence=IDA

GO:0045070 "positive regulation of viral genome replication" evidence=IDA

UNIPROTKB|Q5RD27 SRPK1 "SRSF protein kinase 1" [Pongo abelii (taxid:9601)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 111/162 (68%), Positives = 133/162 (82%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   497 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 553

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLV
Sbjct:   554 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 613

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   614 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007059 "chromosome segregation" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0050684 "regulation of mRNA processing" evidence=ISS

UNIPROTKB|E9PTN4 Srpk1 "Protein Srpk1" [Rattus norvegicus (taxid:10116)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 113/180 (62%), Positives = 137/180 (76%)

Query:    35 FTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIW 94
             F   ++ +    L   + D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIW
Sbjct:   479 FINPLEPKNAEKLKVKIADLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIW 535

Query:    95 SVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG 154
             S ACMAFELATGDYLFEPH+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG
Sbjct:   536 STACMAFELATGDYLFEPHSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKG 595

Query:   155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             +L+HI  LKPW L  VLVEKY W  E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   596 DLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 655

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:106908 Srpk1 "serine/arginine-rich protein specific kinase 1" [Mus musculus (taxid:10090)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 111/162 (68%), Positives = 131/162 (80%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   490 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 546

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L  VLV
Sbjct:   547 HSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLV 606

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W  E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   607 EKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 648

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0007059 "chromosome segregation" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;IDA

GO:0008380 "RNA splicing" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=ISO

GO:0045071 "negative regulation of viral genome replication" evidence=ISO

GO:0050684 "regulation of mRNA processing" evidence=ISO;IDA

RGD|1308272 Srpk1 "SRSF protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 111/162 (68%), Positives = 131/162 (80%)

Query:    53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
             D+G   NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEP
Sbjct:   497 DLG---NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 553

Query:   113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
             H+G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L  VLV
Sbjct:   554 HSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLV 613

Query:   173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             EKY W  E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct:   614 EKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 655

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0007059 "chromosome segregation" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0045070 "positive regulation of viral genome replication" evidence=ISO

GO:0045071 "negative regulation of viral genome replication" evidence=ISO

GO:0050684 "regulation of mRNA processing" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RD27	SRPK1_PONAB	2, ., 7, ., 1, 1, ., 1	0.6832	0.7523	0.2458	yes	N/A
Q03563	SPK1_CAEEL	2, ., 7, ., 1, 1, ., 1	0.6289	0.7429	0.1585	yes	N/A
Q86A12	SKY1_DICDI	2, ., 7, ., 1, 1, ., 1	0.5393	0.7523	0.2454	yes	N/A
Q96SB4	SRPK1_HUMAN	2, ., 7, ., 1, 1, ., 1	0.6832	0.7523	0.2458	yes	N/A
O70551	SRPK1_MOUSE	2, ., 7, ., 1, 1, ., 1	0.6832	0.7523	0.2484	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	214
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-17
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	5e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	7e-17
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-15
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-14
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-14
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	8e-14
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-13
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-13
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-12
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-12
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-12
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	7e-12
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	8e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-11
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-11
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-11
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	4e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-11
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	8e-11
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-10
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-10
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	6e-10
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-09
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-09
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-09
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-09
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-09
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-09
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	8e-09
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-08
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-08
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-08
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	2e-08
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-08
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	9e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-07
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-07
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	7e-07
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	8e-07
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	8e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	5e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	7e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	6e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.001
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.001
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.002
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	0.003
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.003
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 78.3 bits (194), Expect = 1e-17
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 44/149 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            +  T  V T +Y + EVL+  GY  + DIWS+  + +EL TG   F           +D
Sbjct: 150 GEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFP---------GDD 200

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  + + +G                                        +++ +PE   
Sbjct: 201 QLLELFKKIGKPK-------------------------------PPFPPPEWDISPE--- 226

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              + +R +L  DP+ R TA + LQHP+ 
Sbjct: 227 -AKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 24/154 (15%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
               TE V TR YR+ E+L+++  Y  + DIWSV C+  EL T   LF    G  Y    
Sbjct: 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLF---PGRDYI--- 213

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT---P 179
           D L  I+E+LG   +  +       +F T +    ++  L           K   +   P
Sbjct: 214 DQLNLIVEVLGTPSEEDL-------KFITSEKARNYLKSLPK-------KPKKPLSKLFP 259

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
            ++    + L  ML +DPK R TA + L HP+L 
Sbjct: 260 GASPEAIDLLEKMLVFDPKKRITADEALAHPYLA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 76.4 bits (189), Expect = 7e-17
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 19/147 (12%)

Query: 67  FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T+ V TR YR+ E+L+ +  Y    DIW++ C+  EL T   LF P + +      D L
Sbjct: 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLF-PGSSEI-----DQL 208

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I  +LG   K+    G++ +     K   R  P   P  L+ ++       P ++   
Sbjct: 209 YKICSVLGTPTKQDWPEGYKLA----SKLGFR-FPQFAPTSLHQLI-------PNASPEA 256

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWL 212
            + ++ ML +DPK R TA+  LQHP+ 
Sbjct: 257 IDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 76.4 bits (189), Expect = 7e-17
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 32/155 (20%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           + +T +V T  YR+ E+L+ +  Y  + DIWSV C+  E+ TG  LF    GD+   + D
Sbjct: 153 RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLF---PGDS---EID 206

Query: 124 HLAHIIELLG----DIPKRIIQSGHRSSEF--FTKKGELRHIPGLKPWDLYSVLVEKYNW 177
            L  I ++LG    +    + +       F  F  K   + +P L P             
Sbjct: 207 QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDP------------- 253

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                    + L  ML Y+P  R +A + L+HP+ 
Sbjct: 254 ---EGI---DLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 71.5 bits (176), Expect = 6e-15
 Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 25/152 (16%)

Query: 65  KHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           K +T+ V T  YR+ E+L+ A  Y  + D+WSV C+  EL T   LF P   +      D
Sbjct: 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLF-PGKSEI-----D 214

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL----YSVLVEKYNWTP 179
            L  I +LLG  P   I  G               +PG K        Y+ L +K+    
Sbjct: 215 QLNKIFKLLG-TPTEKIWPGFSE------------LPGAKKKTFTKYPYNQLRKKFPALS 261

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
            S  GF + L  +L YDP  R +A D L+HP+
Sbjct: 262 LSDNGF-DLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 71.2 bits (175), Expect = 7e-15
 Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 20/165 (12%)

Query: 51  LFDIGTYRN-ACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDY 108
           L D G  R          T+ V TR YR+ E+L+    Y    D+W++ C+  EL  G+ 
Sbjct: 141 LCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP 200

Query: 109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK-GELRHIPGLKPWDL 167
           LF    GD+   D D L  I + LG +P    +    +  F      E      L+    
Sbjct: 201 LF---PGDS---DIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLE--RR 252

Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           Y   V              +FL+  L  DPK R T  + LQHP+ 
Sbjct: 253 YPGKVSS--------PAL-DFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 49/162 (30%), Positives = 67/162 (41%), Gaps = 19/162 (11%)

Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFE 111
           D G  R      K  T  V T  YR+ E+L+    Y  + D+W+V C+  EL     L  
Sbjct: 151 DFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLL- 209

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
              G +   + + L  II+LLG  P   I  G         K  L   P       Y+ L
Sbjct: 210 --PGKS---EIEQLDLIIQLLGT-PNESIWPGFSDLPL-VGKFTLPKQP-------YNNL 255

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             K+ W  E+      FL   L YDPK RATA + L+  + +
Sbjct: 256 KHKFPWLSEAGLRLLNFL---LMYDPKKRATAEEALESSYFK 294

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 68.9 bits (169), Expect = 5e-14
 Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 19/147 (12%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T  V TR YR+ E+L+   GY    DIWSV C+  EL +   LF    G +     D L
Sbjct: 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLF---PGKSEI---DQL 208

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I   LG     +       +  +         P      L  +        P ++   
Sbjct: 209 FKIFRTLGTPDPEVWPKFTSLARNYKFS-----FPKKAGMPLPKL-------FPNASPQA 256

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWL 212
            + L  ML YDP  R TA   L HP+ 
Sbjct: 257 LDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 68.3 bits (167), Expect = 8e-14
 Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 20/146 (13%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           F+ +V T  YR+ +VL+ +  Y  S DIWSV C+  E+ TG  LF        T +ED L
Sbjct: 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLF------PGTNNEDQL 210

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I  ++G   +       +  E+          P   P DL  +        P +    
Sbjct: 211 LKIFRIMGTPTESTWPGISQLPEY------KPTFPRYPPQDLQQLF-------PHADPLG 257

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPW 211
            + L  +L  +P+LR +A D LQHPW
Sbjct: 258 IDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 31/167 (18%)

Query: 51  LFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDY 108
           L D G+ R      K  +TE + TR YR+ E L+  G Y    DIW+V C+ FE+ +   
Sbjct: 140 LADFGSCRGIY--SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP 197

Query: 109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRII----QSGHRSSEFFTKKGELRHIPGLKP 164
           LF        T + D +A I ++LG     ++    +S H +  F +KKG    +  L P
Sbjct: 198 LFPG------TNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKG--TGLRKLLP 249

Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
                      N + E      + L+ +LAYDP  R TA   L+HP+
Sbjct: 250 -----------NASAE----GLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 66.5 bits (163), Expect = 4e-13
 Identities = 50/168 (29%), Positives = 69/168 (41%), Gaps = 35/168 (20%)

Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
           D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  LF 
Sbjct: 161 DFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF- 216

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQ-SGHRSSEFFTK------KGELRHIPGLKP 164
                      DH+  +        KRI+   G    E   K      +  ++ +P +  
Sbjct: 217 --------PGSDHIDQL--------KRIMNLVGTPDEELLQKISSESARNYIQSLPQMPK 260

Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            D   V        P       + L  ML  DP  R TAA+ L HP+L
Sbjct: 261 KDFKEVFS---GANPL----AIDLLEKMLVLDPDKRITAAEALAHPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 66.7 bits (163), Expect = 4e-13
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 22/153 (14%)

Query: 63  VDKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD 121
                TE V TR YR+ E+++    Y  + D+WSV C+  EL     +F+   G  Y   
Sbjct: 162 NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK---GKDYV-- 216

Query: 122 EDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE--LRHIPGLKPWDLYSVLVEKYNWTP 179
            D L  I+++LG   +  +      S   + K +  +R +P +      S+     N  P
Sbjct: 217 -DQLNQILQVLGTPDEETL------SRIGSPKAQNYIRSLPNIPKKPFESIFP---NANP 266

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            +     + L  +LA+DP  R +  + L+HP+L
Sbjct: 267 LAL----DLLEKLLAFDPTKRISVEEALEHPYL 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 36/150 (24%), Positives = 48/150 (32%), Gaps = 42/150 (28%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
               T  V T  Y + EVL+   GY    D+WS+  + +EL TG   F            
Sbjct: 152 SSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGE------NIL 205

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I  +LG   +         SE      E +                         
Sbjct: 206 DQLQLIRRILGPPLEFDEPKWSSGSE------EAKD------------------------ 235

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                 ++  L  DP  R TA + LQHPW 
Sbjct: 236 -----LIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 31/151 (20%)

Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
            T  V T  YR+ EVL+ + Y    D+WSV C+  EL     LF    G +   + D L 
Sbjct: 163 LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR---GTS---EADQLD 216

Query: 127 HIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
            I +++G     + P+ +     RSS                       + E+       
Sbjct: 217 KIFDVIGLPSEEEWPRNVSLP--RSS--------FPSYTPRSFKSFVPEICEEGL----- 261

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                + L+ ML ++P  R +A + LQHP+ 
Sbjct: 262 -----DLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 24/153 (15%)

Query: 64  DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           D   T  V TR YR+ E+++    YD   DIWS  C+  E+  G  LF           +
Sbjct: 159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP---------GK 209

Query: 123 DHLAH---IIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
           DH+     I +LLG  P  +I +          +  LR +  L P        EK+    
Sbjct: 210 DHVNQFSIITDLLGTPPDDVINT-------ICSENTLRFVQSL-PKREPVPFSEKFKNAD 261

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            SA    + L  ML +DP+ R +AA+ L HP+L
Sbjct: 262 PSAI---DLLEKMLVFDPQKRISAAEALAHPYL 291

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 63.0 bits (153), Expect = 7e-12
 Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R     D   T  V TR YR+ EV++N   Y  + DIWSV C+  E+ TG  L
Sbjct: 159 ILDFGLARQT---DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPL 215

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK------KGELRHIPGLK 163
           F+ H         DHL  ++E++         +G  S EF  K      K  ++ +P  +
Sbjct: 216 FKGH---------DHLDQLMEIMK-------VTGTPSKEFVQKLQSEDAKNYVKKLPRFR 259

Query: 164 PWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             D  S+L    N  P +       L  ML  D + R TAA+ L HP+ +
Sbjct: 260 KKDFRSLLP---NANPLAVN----VLEKMLVLDAESRITAAEALAHPYFE 302

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 62.5 bits (152), Expect = 8e-12
 Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 21/160 (13%)

Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
           D+G  R      K +T ++ T  YR+ EVL+ +  Y    DIWSV C+  E++    LF 
Sbjct: 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLF- 212

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
              GD+   +   L HI +LLG  P   +  G       +K  +    P  KP DL S  
Sbjct: 213 --PGDS---ELQQLLHIFKLLG-TPTEQVWPG------VSKLRDWHEFPQWKPQDL-SRA 259

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V   + +PE      + L+ ML YDP  R +A   L HP+
Sbjct: 260 VP--DLSPEGL----DLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 22/148 (14%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T  V T  YR  E+L+ A  Y    D+WSV C+  EL  G  +F    G T   + + L
Sbjct: 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIF---QGST---ELEQL 211

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLY-SVLVEKY-NWTPESAR 183
             I EL G  P      G     +F           LKP   Y   L E + +    SA 
Sbjct: 212 EKIFELCG-SPTDENWPGVSKLPWFEN---------LKPKKPYKRRLREFFKHLIDPSA- 260

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPW 211
              + L  +L  DPK R +A   LQH +
Sbjct: 261 --LDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 42/152 (27%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           ++  T  V TR YR+ E+L  A  Y    D+WSV C+  EL           GD+   D 
Sbjct: 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL---PGDS---DI 209

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I E LG  P      G  S   +    E +  P      ++            S 
Sbjct: 210 DQLGKIFEALG-TPTEENWPGVTSLPDYV---EFKPFPPTPLKQIFPAA---------SD 256

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
               + L+ +L  +P  R TA   L+HP+  N
Sbjct: 257 DAL-DLLQRLLTLNPNKRITARQALEHPYFSN 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 19/150 (12%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
            + ++  V TR YR+ E+L  A  YD   D+W+V C+  EL  G  LF    G+    D 
Sbjct: 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLF---PGEN---DI 207

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           + LA +   LG  P      G  S   + K       P  KP  L  +        P+++
Sbjct: 208 EQLAIVFRTLG-TPNEETWPGLTSLPDYNKI----TFPESKPIPLEEIF-------PDAS 255

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
               + L+ +L YDP  R +AA+ L+HP+ 
Sbjct: 256 PEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 60.3 bits (147), Expect = 4e-11
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 45/139 (32%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
           T  + + EV+    YD  ADIWS+   A ELA G     P++     +            
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKP---PYSELPPMK------------ 204

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
                +I  +G                PGL+             W+ E    F +FL+  
Sbjct: 205 --ALFKIATNGP---------------PGLR---------NPEKWSDE----FKDFLKKC 234

Query: 193 LAYDPKLRATAADCLQHPW 211
           L  +P+ R TA   L+HP+
Sbjct: 235 LQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 65  KHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           KH T++V T+ YR+ E+L+ +  Y  + DIWSV C+  EL     LF+  +         
Sbjct: 159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ------ 212

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHI--PGLKPWDLYSVLVEKYNWTPES 181
            L  I +LLG             +     +G   HI     KP  L  VL   Y  + ++
Sbjct: 213 QLDLITDLLGTPSL--------EAMRSACEGARAHILRGPHKPPSL-PVL---YTLSSQA 260

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                  L  ML +DP  R +AAD L HP+L 
Sbjct: 261 THEAVHLLCRMLVFDPDKRISAADALAHPYLD 292

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.5 bits (145), Expect = 7e-11
 Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 45/133 (33%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+    Y  +ADIWS+ C   E+ATG    +P     ++   + +A +         +I
Sbjct: 173 EVIRGEEYGRAADIWSLGCTVIEMATG----KP----PWSELGNPMAAL--------YKI 216

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
             S           GE   IP                   E A+   +FLR  L  DPK 
Sbjct: 217 GSS-----------GEPPEIP---------------EHLSEEAK---DFLRKCLRRDPKK 247

Query: 200 RATAADCLQHPWL 212
           R TA + LQHP+L
Sbjct: 248 RPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 59.7 bits (145), Expect = 8e-11
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)

Query: 67  FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T+ V TR YR+ E+L+ +  Y  + DIW+V C+  E+ TG+ LF    GD+   D D L
Sbjct: 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLF---PGDS---DIDQL 210

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFF-TKKGELRHIPGLKPWDLYSVLVEKY-NWTPESAR 183
            HII+ LG++  R  +   ++  F   +  E++ I  L+         +++   +     
Sbjct: 211 YHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLE---------KRFPKLSGLVL- 260

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPW 211
              +  +  L  DP  R +++  L H +
Sbjct: 261 ---DLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 28/152 (18%)

Query: 68  TEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
           TE V TR YR+ E+++N  GY  + DIWSV C+  E+ +   LF    G  Y      L 
Sbjct: 167 TEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLF---PGKDY---LHQLN 220

Query: 127 HIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
            I+ +LG     D+   II    R+  +      L   P + PW+        +      
Sbjct: 221 LILGVLGTPSQEDL-NCIISL--RARNYIK---SLPFKPKV-PWNKL------FPNADPK 267

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           A    + L  ML ++P  R T  + L HP+L+
Sbjct: 268 AL---DLLDKMLTFNPHKRITVEEALAHPYLE 296

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 49/163 (30%), Positives = 65/163 (39%), Gaps = 20/163 (12%)

Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFE 111
           D G  R         TE V TR YR+ E+L+N + Y  + D+WSV C+  EL     LF 
Sbjct: 151 DFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP 210

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKKGELRHIPGLKPWDLYSV 170
              G  Y      L  I ELLG        S       F   +   R+I  L P+     
Sbjct: 211 ---GKDYV---HQLKLITELLG--------SPSEEDLGFIRNEKARRYIRSL-PYTPRQS 255

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +   P +     + L  ML +DP  R T  + L HP+L 
Sbjct: 256 FARLF---PHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 57.6 bits (139), Expect = 6e-10
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+A   D   T  V TR YR+ EV++N   Y+ + DIWSV C+  E+ TG  L
Sbjct: 158 ILDFGLARHA---DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTL 214

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK------KGELRHIPGLK 163
           F+   G  Y    D L  I+++          +G    EF  K      K  ++ +P   
Sbjct: 215 FK---GKDYL---DQLTQILKV----------TGVPGPEFVQKLEDKAAKSYIKSLPKY- 257

Query: 164 PWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           P   +S L       P+++    + L  ML  D   R TA + L+HP+  
Sbjct: 258 PRKDFSTLF------PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD 301

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 34/154 (22%)

Query: 67  FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T +V T  YR+ EVL+ +  Y    DIWS+  +  E+AT   LF    GD+   + D L
Sbjct: 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH---GDS---EIDQL 211

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFT------KKGELR-HIPGLKPWDLYSVLVEKYNWT 178
             I  +LG  P   +  G  S   +       KKG LR  +  L                
Sbjct: 212 FRIFRILG-TPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNL---------------- 254

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                G    L  ML YDP  R +A   L HP+ 
Sbjct: 255 --DEDGLD-LLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 68  TEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
           T+ V TR YR+ E+L+ +  Y    D+WSV C+  E+  G  LF      T T ++  L 
Sbjct: 170 TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP----GTSTLNQ--LE 223

Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
            IIE++G      I+S    S F      L  +P          L E      + A    
Sbjct: 224 KIIEVIGPPSAEDIESIK--SPFAATM--LDSLPSRPR----KPLDELLPKASDDA---L 272

Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
           + L+ +L ++P  R TA + L+HP++ 
Sbjct: 273 DLLKKLLVFNPNKRLTAEEALEHPYVA 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 37/171 (21%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R A   D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL  G  L
Sbjct: 159 ILDFGLARQA---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKAL 215

Query: 110 FEPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPW 165
           F    G+ Y    D L  I+E++G    ++ K+I      SSE   K   ++ +P +   
Sbjct: 216 F---PGNDYI---DQLKRIMEVVGTPSPEVLKKI------SSEHARKY--IQSLPHMPQQ 261

Query: 166 DLYSVLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPWL 212
           DL  +            RG +    + L  ML  D   R +A++ L HP+ 
Sbjct: 262 DLKKIF-----------RGANPLAIDLLEKMLVLDSDKRISASEALAHPYF 301

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 56.3 bits (135), Expect = 2e-09
 Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 160 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218

Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 219 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 271

Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  + LQHP++
Sbjct: 272 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDEALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 161 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 217

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 218 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 267

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           V +      P +     + L  ML  D   R TAA  L H + 
Sbjct: 268 VFIGA---NPLAV----DLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 13/149 (8%)

Query: 68  TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAH 127
           T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF    G  +    D    
Sbjct: 175 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF---PGTDHI---DQWNK 228

Query: 128 IIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDLYSVLVEKYN-WTPESAR 183
           IIE LG      +     +   + +   K        L P  L+    E +N      AR
Sbjct: 229 IIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQAR 288

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              + L  ML  DP+ R +  D LQHP++
Sbjct: 289 ---DLLSKMLVIDPEKRISVDDALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 8e-09
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 46/135 (34%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+  +GYD  ADIWS+   A ELA G+    P +            H + +L  IPK  
Sbjct: 168 EVIKQSGYDEKADIWSLGITAIELAKGE---PPLSD----------LHPMRVLFLIPK-- 212

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                             + P L+  + +S             + F +F+   L  DPK 
Sbjct: 213 -----------------NNPPSLEG-NKFS-------------KPFKDFVSLCLNKDPKE 241

Query: 200 RATAADCLQHPWLQN 214
           R +A + L+H +++ 
Sbjct: 242 RPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 53.5 bits (128), Expect = 1e-08
 Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 29/173 (16%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R AC  +   T  V TR YR+ EV++  GY  + DIWSV C+  EL  G  +F
Sbjct: 164 ILDFGLARTAC-TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 222

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF-----TKKGELRHIPGLKPW 165
           +       T   D    +IE LG            S+EF      T +  + + P   P 
Sbjct: 223 QG------TDHIDQWNKVIEQLGT----------PSAEFMNRLQPTVRNYVENRPQY-PG 265

Query: 166 DLYSVLVEKYNWTPESARG------FSEFLRPMLAYDPKLRATAADCLQHPWL 212
             +  L   + +  ES R         + L  ML  DP  R +  + L+HP++
Sbjct: 266 ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 53.5 bits (128), Expect = 1e-08
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 17/161 (10%)

Query: 51  LFDIGTYRNAC-WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYL 109
           L D G  RN     + ++TE V TR YRS E+L+ A Y  + D+WSV C+  EL+ G  L
Sbjct: 141 LCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPL 200

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F   +      + D L  I ++LG +P   ++  + +  F      LR      P     
Sbjct: 201 FPGES------EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG----LRFPAVNHP----Q 246

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHP 210
            L  +Y           + ++ +L  +P  R     CL HP
Sbjct: 247 SLERRYLGILSGV--LLDLMKNLLKLNPTDRYLTEQCLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 22/148 (14%)

Query: 67  FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T +V T  YR+ E+L+ +  Y    DIWS+ C+  E+     LF    GD+   + D L
Sbjct: 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLF---PGDS---EIDQL 209

Query: 126 AHIIELLGDIPKRIIQSGHRS-SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
             I   LG  P   +  G  S  ++          P     DL  V+       P     
Sbjct: 210 FRIFRTLG-TPDEDVWPGVTSLPDYKPT------FPKWARQDLSKVV-------PNLDED 255

Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWL 212
             + L  ML YDP  R +A   LQHP+ 
Sbjct: 256 GLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 40/186 (21%)

Query: 45  RSLPP-----FLFDIGTYRNACWVDKHF-TEDVQTRQYRSLEVLINAGYDCSADIWSVAC 98
           R+LPP      + D+G     C  ++H  T  V TR YRS EV++  G+  S D+WS+ C
Sbjct: 278 RALPPDPCRVRICDLG----GCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333

Query: 99  MAFELATGDYLFEPHAGDTYTRDEDHLAHIIE-LLGDIPKR-IIQSG-HRSSEFFTKKGE 155
           + +EL TG  L++ H       + +HL H++E  LG +P     + G   +   +   G+
Sbjct: 334 IIYELYTGKLLYDTH------DNLEHL-HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386

Query: 156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRP---------MLAYDPKLRATAADC 206
           LR  P   P  L  +           AR   E +R          +L YD + R  A   
Sbjct: 387 LR--PCTDPKHLARI---------ARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435

Query: 207 LQHPWL 212
             HP++
Sbjct: 436 TTHPYV 441

Length = 467

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 19/165 (11%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L D G  R      K ++ +V T  YR  +VL+ +  Y    D+W V C+ FE+A+G  L
Sbjct: 145 LADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPL 204

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T    ED L  I  LLG  P      G  S++ F       + P  KP  L  
Sbjct: 205 F---PGSTV---EDELHLIFRLLG-TPTEETWPGISSNDEFKN----YNFPKYKPQPL-- 251

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                 N  P       E L   L Y+ K R +A + ++H + ++
Sbjct: 252 -----INHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 45/133 (33%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+   GY+  ADIWS+   A E+A G     P++            H +  +  IP   
Sbjct: 169 EVIQEIGYNNKADIWSLGITAIEMAEG---KPPYSD----------IHPMRAIFMIPN-- 213

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                            +  P L          +   W+PE    F++F++  L  DP+ 
Sbjct: 214 -----------------KPPPTLS---------DPEKWSPE----FNDFVKKCLVKDPEE 243

Query: 200 RATAADCLQHPWL 212
           R +A   LQHP++
Sbjct: 244 RPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 24/152 (15%)

Query: 66  HFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
             TE V TR YR+ E+L++   Y  + D+WSV C+  E+     LF    G  Y      
Sbjct: 167 FMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLF---PGKNYV---HQ 220

Query: 125 LAHIIELLGDIPKRIIQS--GHRSSEFFTKKGELRHIPGLKPWD-LYSVLVEKYNWTPES 181
           L  I+ +LG   + ++      R  ++       R  P   PW  ++          P++
Sbjct: 221 LKLILSVLGSPSEEVLNRIGSDRVRKYIQNLP--RKQP--VPWSKIF----------PKA 266

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    + L  ML +DP+ R T    LQHP+L 
Sbjct: 267 SPEALDLLSQMLQFDPEERITVEQALQHPFLA 298

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 24/152 (15%)

Query: 64  DKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
              +T+ V TR YR+ E+L+ +  Y    D+W++ C+  EL TG  L+ P   D      
Sbjct: 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLW-PGKSDV----- 207

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP---GLKPWDLYSVLVEKYNWTP 179
           D L  I + LGD+  R  Q    +++FF  KG    IP     +P      L  K+    
Sbjct: 208 DQLYLIRKTLGDLIPRHQQI-FSTNQFF--KG--LSIPEPETREP------LESKFPNIS 256

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
             A     FL+  L  DP  R +  + L+HP+
Sbjct: 257 SPALS---FLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 52.1 bits (125), Expect = 4e-08
 Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 51/183 (27%)

Query: 51  LFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL 103
           +  IG +  A  VD H+      +E + T+ YRS  +L++   Y  + D+W+  C+  E+
Sbjct: 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212

Query: 104 ATGDYLFEPHAGD-------------TYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF 150
            TG  LF   AG                 R+ED      ELL  IP  +   G       
Sbjct: 213 LTGKPLF---AGAHELEQMQLILESVPVVREEDRN----ELLNVIPSFVRNDG------- 258

Query: 151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHP 210
              GE R         L  +L       P       +FL  +L ++P  R TA + L HP
Sbjct: 259 ---GEPRR-------PLRDLL-------PGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301

Query: 211 WLQ 213
           ++ 
Sbjct: 302 YMS 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 38/137 (27%), Positives = 50/137 (36%), Gaps = 49/137 (35%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHIIELLGDIPK 137
           EV+    Y    DIWS+  M  E+A G+  YL EP     +                   
Sbjct: 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL------------------ 227

Query: 138 RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDP 197
                        T KG    IP LK             W+PE    F +FL   L  DP
Sbjct: 228 ------------ITTKG----IPPLK---------NPEKWSPE----FKDFLNKCLVKDP 258

Query: 198 KLRATAADCLQHPWLQN 214
           + R +A + LQHP+L+ 
Sbjct: 259 EKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 21/163 (12%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G  R      + ++ +V T  YR  +VL  A  Y  S D+WS  C+  ELA     
Sbjct: 140 LADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 199

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
             P         +D L  I  LLG  P      G            +  +P  KP+ +Y 
Sbjct: 200 LFPG-----NDVDDQLKRIFRLLG-TPTEESWPG------------VSKLPDYKPYPMYP 241

Query: 170 VLVEKYNWTPE-SARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
                 N  P+ ++ G  + L+ +L  +P  R +A + LQHP+
Sbjct: 242 ATTSLVNVVPKLNSTG-RDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 21/156 (13%)

Query: 67  FTED--VQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD-- 121
              D  V T  YR+ E+L+ A  Y  + DIW++ C+  EL T + +F+         +  
Sbjct: 170 ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPF 229

Query: 122 -EDHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY 175
             D L  I E+LG     D P       + +     K         L  W      +EK 
Sbjct: 230 QRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS-NSLAKW------MEK- 281

Query: 176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
                 ++GF   LR +L YDP  R TA + L+HP+
Sbjct: 282 -HKKPDSQGFD-LLRKLLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 16/163 (9%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G  R      K ++ +V T  YR  +VL+ +  Y  S D+W V C+ +E+ATG  L
Sbjct: 144 LADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPL 203

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T   D+ H   I  +LG  P    ++    S     K      P   P  L +
Sbjct: 204 F---PGSTDVEDQLHK--IFRVLG-TPTE--ETWPGVSSNPEFKPY--SFPFYPPRPLIN 253

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
               + +  P       E     L Y+PK R +AA+ ++HP+ 
Sbjct: 254 H-APRLDRIPHGE----ELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 48.8 bits (116), Expect = 5e-07
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 31/147 (21%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G++   + D L  I +
Sbjct: 168 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 221

Query: 131 LLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
           L+G     D P+ +          F+ +G        +P           +  PE     
Sbjct: 222 LIGLPPEDDWPRDVTLPRGA----FSPRGP-------RPVQ---------SVVPEIEESG 261

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWL 212
           ++ L  ML ++P  R +A   LQHP+ 
Sbjct: 262 AQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 48.5 bits (115), Expect = 7e-07
 Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 13/165 (7%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
               G  +    D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 ---PGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279

Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           +    E        AR   + L  ML  D   R +  + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYI 321

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 48.3 bits (115), Expect = 8e-07
 Identities = 41/138 (29%), Positives = 56/138 (40%), Gaps = 18/138 (13%)

Query: 80  EVLINAGYDCSADIWSVACMAFE-LATGDYLFE--PHAGDTYTRD-EDHLAHIIELLGDI 135
           EVL    Y+  ADIWS   + FE LA    +FE  P   + Y +    HL  II  L   
Sbjct: 226 EVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH 285

Query: 136 PKRI-IQSGHR-SSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFL-RPM 192
           P+      G R    F       R     +P+  Y    ++ N  P       EFL   M
Sbjct: 286 PEEFPRDPGSRLVRGFIEYASLER-----QPYTRYPC-FQRVN-LPIDG----EFLVHKM 334

Query: 193 LAYDPKLRATAADCLQHP 210
           L +D  +R +A + L +P
Sbjct: 335 LTFDAAMRPSAEEILNYP 352

Length = 357

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 8e-07
 Identities = 36/132 (27%), Positives = 45/132 (34%), Gaps = 43/132 (32%)

Query: 79  LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKR 138
             V    GYD   DIW++   A ELA      +P   D          H +  L  I K 
Sbjct: 173 AAVERKGGYDGKCDIWALGITAIELAEL----QPPMFDL---------HPMRALFLISKS 219

Query: 139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK 198
                                P LK         +K  W+P     F +F++  L  DPK
Sbjct: 220 NFPP-----------------PKLK---------DKEKWSPV----FHDFIKKCLTKDPK 249

Query: 199 LRATAADCLQHP 210
            R TA   LQHP
Sbjct: 250 KRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 48.2 bits (113), Expect = 8e-07
 Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 38/154 (24%)

Query: 63  VDKHFTEDVQTRQYRSLEVLI---NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
           +    +  V T  Y + EVL+    A    S+DIWS+    +EL TG   FE     + T
Sbjct: 161 IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSAT 220

Query: 120 RDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
                L  I+EL        +                                   +   
Sbjct: 221 --SQTLKIILELPTPSLASPLSP---------------------------------SNPE 245

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             ++  S+ L+ +LA DPK R +++  L H  L 
Sbjct: 246 LISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 19/164 (11%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G  R      K ++ +V T  YR  ++L+ +  Y    D+W V C+ +E++TG  L
Sbjct: 145 LADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPL 204

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T    E+ L  I  +LG  P      G  S+E F       + P  +   L  
Sbjct: 205 F---PGSTV---EEQLHFIFRILG-TPTEETWPGILSNEEFKS----YNYPKYRADCL-- 251

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                +N  P      +E L  +L ++ + R +A + ++HP+  
Sbjct: 252 -----HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 34/144 (23%), Positives = 53/144 (36%), Gaps = 41/144 (28%)

Query: 70  DVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
            V T  Y + E +    Y   +DIWS+     ELATG + + P   D           I 
Sbjct: 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE-NDPPD-------GIF 210

Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFL 189
           ELL    + I+                   P   P   +S         P+    F +F+
Sbjct: 211 ELL----QYIVNEP----------------PPRLPSGKFS---------PD----FQDFV 237

Query: 190 RPMLAYDPKLRATAADCLQHPWLQ 213
              L  DP+ R +  + L+HP+++
Sbjct: 238 NLCLIKDPRERPSYKELLEHPFIK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 47/140 (33%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  Y S E L +  YD  +DIWS+ C+ +EL      F         R++  LA  I 
Sbjct: 171 VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFT-------ARNQLQLASKI- 222

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
                                K+G+ R IP     +L  V                  ++
Sbjct: 223 ---------------------KEGKFRRIPYRYSSELNEV------------------IK 243

Query: 191 PMLAYDPKLRATAADCLQHP 210
            ML  DP  R +  + LQ P
Sbjct: 244 SMLNVDPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 20/149 (13%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           FT +V T  YR+ E+L+ +  Y    DIWSV C+  E+     LF    GD+   + D L
Sbjct: 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLF---PGDS---EIDEL 213

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I  +LG  P      G  S   +         P   P DL +V+       P      
Sbjct: 214 FKIFRILG-TPNEETWPGVTSLPDYKSA-----FPKWPPKDLATVV-------PTLEPAG 260

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            + L  ML  DP  R TA   L+H + ++
Sbjct: 261 VDLLSKMLRLDPSKRITARAALEHEYFKD 289

Length = 294

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSL------EVLINAGYDCSADIWSVACMAFELA 104
           L D G  R   WV  H T     +           EV+  +GY   +DIWS+ C  FE+A
Sbjct: 143 LIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMA 202

Query: 105 TG 106
           TG
Sbjct: 203 TG 204

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 19/163 (11%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L D G  R      K ++ +V T  YR  +VL+ +  Y    D+W V C+ +E+ATG  +
Sbjct: 144 LADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPM 203

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T  ++E HL  I  LLG  P      G  S+E F         P  +   L  
Sbjct: 204 F---PGST-VKEELHL--IFRLLG-TPTEETWPGITSNEEFRSYL----FPQYRAQPL-- 250

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                 N  P       + L  +L Y+ K R +A   L+H + 
Sbjct: 251 -----INHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 39/160 (24%), Positives = 58/160 (36%), Gaps = 43/160 (26%)

Query: 67  FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            T  V T  YR+ E+L+ A  Y  + D+WSV C+  EL TG  LF          + D L
Sbjct: 190 MTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLF------PGENEIDQL 243

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I ELLG                          P    W     L     +TP   +  
Sbjct: 244 GRIFELLG-------------------------TPNEDNWPQAKKLPLYTEFTPRKPKDL 278

Query: 186 S-----------EFLRPMLAYDPKLRATAADCLQHPWLQN 214
                       + L+ +L  +P  R +A + L+H + ++
Sbjct: 279 KTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS 318

Length = 335

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 45.8 bits (109), Expect = 5e-06
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 33/153 (21%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T  V TR YR  E+L+    Y  + DIW + C+  E+ T   + +   G +   D D L
Sbjct: 183 YTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ---GKS---DIDQL 236

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I +L G  P      G RS            +PG +    ++      N+       F
Sbjct: 237 HLIFKLCG-TPTEETWPGWRS------------LPGCEGVHSFT------NYPRTLEERF 277

Query: 186 SEFLRPM-------LAYDPKLRATAADCLQHPW 211
            +            L+ DP  R TA+D L+HP+
Sbjct: 278 GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 44/146 (30%), Positives = 62/146 (42%), Gaps = 20/146 (13%)

Query: 67  FTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   LF    GD+   + D L
Sbjct: 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF---PGDS---EIDQL 210

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
             I   LG  P  ++  G  S   +  K      P     D   V+       P      
Sbjct: 211 FRIFRTLG-TPDEVVWPGVTSLPDY--KPSF---PKWARQDFSKVV-------PPLDEDG 257

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPW 211
            + L  ML YDP  R +A   L HP+
Sbjct: 258 RDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 43/144 (29%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  Y S E +    Y  +ADIWS+     E A G + F P    ++           E
Sbjct: 161 VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF----------FE 210

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
           L+     + I  G                         S+      ++PE    F +F+ 
Sbjct: 211 LM-----QAICDG----------------------PPPSL--PAEEFSPE----FRDFIS 237

Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
             L  DPK R +AA+ LQHP+++ 
Sbjct: 238 ACLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 47/142 (33%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  + + EV+  + YD  ADIWS+   A ELA G    EP   D +            
Sbjct: 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG----EPPNSDMH------------ 205

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
                P R+                L  IP   P  L          T E ++ F EF+ 
Sbjct: 206 -----PMRV----------------LFLIPKNNPPTL----------TGEFSKPFKEFID 234

Query: 191 PMLAYDPKLRATAADCLQHPWL 212
             L  DP  R TA + L+H ++
Sbjct: 235 ACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           T +Y + EVL+  GY  + D WS+  + +E+ TG   F
Sbjct: 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPF 193

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 27/154 (17%)

Query: 67  FTEDVQTRQYRSLEVL--INAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
           +T+ V TR YR+ E+     + Y  + DIWS+ C+  E+ TG  LF         ++  H
Sbjct: 163 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP-------GKNVVH 215

Query: 125 -LAHIIELLGDIPKRIIQS--GHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY-NWTPE 180
            L  I +LLG      I      ++  + +   + + +P            +K+ N  P 
Sbjct: 216 QLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVP----------FSQKFPNADPL 265

Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + R     L  +LA+DPK R TA + L  P+ + 
Sbjct: 266 ALR----LLERLLAFDPKDRPTAEEALADPYFKG 295

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 42.5 bits (100), Expect = 7e-05
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 21/148 (14%)

Query: 67  FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           +T  V T  YR  E+L+    Y  + D+WS  C+  EL T   +F+ +           L
Sbjct: 174 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ---------EL 224

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS-VLVEKYNWTPESARG 184
           A + EL+  +       G      +    +L +   +KP   Y   L E++++ P  A  
Sbjct: 225 AQL-ELISRL------CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPA-- 275

Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWL 212
             + L  ML  DP  R TA + L  PWL
Sbjct: 276 -LDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 45/128 (35%)

Query: 87  YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS 146
           YD  ADIWS+     ELA  +    PH          H  + + +L  I K         
Sbjct: 185 YDYKADIWSLGITLIELAQME---PPH----------HELNPMRVLLKILK--------- 222

Query: 147 SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC 206
           SE  T                   L +   W+      F++FL+  L  DP  R TAA+ 
Sbjct: 223 SEPPT-------------------LDQPSKWSSS----FNDFLKSCLVKDPDDRPTAAEL 259

Query: 207 LQHPWLQN 214
           L+HP++ +
Sbjct: 260 LKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQ---TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
           L  +G  R    ++    ED +   T  Y + EV++  G+  + D WS+ C+ +E   G
Sbjct: 139 LSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 49/141 (34%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
           T  Y S E L + GYD  +DIWS+ C+ +E+    + FE           + L+ ++ ++
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ---------NFLSVVLRIV 218

Query: 133 -GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRP 191
            G  P                                  L E Y      +R  +  ++ 
Sbjct: 219 EGPTPS---------------------------------LPETY------SRQLNSIMQS 239

Query: 192 MLAYDPKLRATAADCLQHPWL 212
           ML  DP LR +AA+ L++P++
Sbjct: 240 MLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 71  VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD---EDHLA 126
           V T  YR+ E+L+ A  Y  + DIW++ C+  EL T + +F     D  T +    D L 
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLD 235

Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL--VEKYNWTPESARG 184
            I  ++G    +  +   +  E+ T + + R       +   S++  +EK+   P+S   
Sbjct: 236 RIFSVMGFPADKDWEDIRKMPEYPTLQKDFRR----TTYANSSLIKYMEKHKVKPDSKVF 291

Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWL 212
               L+ +L  DP  R T+   LQ P+ 
Sbjct: 292 L--LLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
           T +Y + E+++N GYD S D WS+  + +EL TG
Sbjct: 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTG 188

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 76  YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT 117
           Y + EVL   GYD + D WS+ CM +E   G   F P +G T
Sbjct: 164 YMAPEVLRGKGYDFTVDYWSLGCMLYEFLCG---FPPFSGST 202

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 45/142 (31%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  + + EV+    Y    DIWS+  M  E+  G+    P+  D+  +        ++
Sbjct: 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE---PPYFSDSPVQ-------AMK 227

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
            L D P   +++ H+ S            P L+                       +FL 
Sbjct: 228 RLRDSPPPKLKNAHKIS------------PVLR-----------------------DFLE 252

Query: 191 PMLAYDPKLRATAADCLQHPWL 212
            ML  +P+ RATA + L HP+L
Sbjct: 253 RMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 28/145 (19%)

Query: 73  TRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIEL 131
           +R YR+ E+++ A  Y    D+WS+ C+  E+  G  +F   +        D L  II++
Sbjct: 233 SRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS------SVDQLVRIIQV 286

Query: 132 LGDIPK---RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF-SE 187
           LG   +   + +   +   +F          P +KP DL  V  +    TP+ A  F S+
Sbjct: 287 LGTPTEDQLKEMNPNYADIKF----------PDVKPKDLKKVFPKG---TPDDAINFISQ 333

Query: 188 FLRPMLAYDPKLRATAADCLQHPWL 212
           FL+    Y+P  R    + L  P+ 
Sbjct: 334 FLK----YEPLKRLNPIEALADPFF 354

Length = 440

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELA 104
           V T  Y S E +   GY+  +DIWS+ C+ +E+A
Sbjct: 167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 30/170 (17%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G  R      + ++ +V T  YR  +VL+ A  Y  + DIW   C+  E+  G   
Sbjct: 144 LADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPA 203

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKP-WDLY 168
           F P   D +    + L  I  +LG +P      G            +  +P  KP W L 
Sbjct: 204 F-PGVSDVF----EQLEKIWTVLG-VPTEDTWPG------------VSKLPNYKPEWFLP 245

Query: 169 S------VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                  V+ ++ +  P++     +    ML   PK R +A D L HP+ 
Sbjct: 246 CKPQQLRVVWKRLSRPPKA----EDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFEL 103
                  V T  Y + EVL+  G Y   +DIWS+  + +EL
Sbjct: 147 KSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 71  VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD---EDHLA 126
           V T  YR+ E+L+ A  Y  + DIW++ C+  EL T + +F     D  T +    D L 
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 235

Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL--VEKYNWTPESARG 184
            I  ++G    +  +   +  E  T   + R       +   S++  +EK+   P+S + 
Sbjct: 236 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRR----NTYTNCSLIKYMEKHKVKPDS-KA 290

Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWL 212
           F   L+ +L  DP  R T+   +Q P+ 
Sbjct: 291 F-HLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
           T  Y + EV     Y   +DIWS+ C+ +E+AT    FE
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             FL  ML  DP  RATAA+ L HP+L  
Sbjct: 246 RSFLDRMLVRDPAQRATAAELLNHPFLAK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 30/129 (23%), Positives = 46/129 (35%), Gaps = 44/129 (34%)

Query: 84  NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSG 143
           N  Y   +D+WS+     E+A G Y + P   +TY      L+ I++  GD P       
Sbjct: 181 NPTYTVQSDVWSLGLSILEMALGRYPYPP---ETYANIFAQLSAIVD--GD-P------- 227

Query: 144 HRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA 203
                           P L              ++ ++     +F+   L   P  R T 
Sbjct: 228 ----------------PTLPS-----------GYSDDA----QDFVAKCLNKIPNRRPTY 256

Query: 204 ADCLQHPWL 212
           A  L+HPWL
Sbjct: 257 AQLLEHPWL 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)

Query: 73  TRQYRSLEVLINA--GYDCSADIWSVACMAFELATGDYLF----EPHA 114
           T QY + EV+     GY   ADIWS+ C   E+ATG   F    EP A
Sbjct: 172 TLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA 219

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 47/142 (33%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  + + EV+  + YD  ADIWS+   A ELA G    EP   D +            
Sbjct: 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG----EPPNSDLH------------ 205

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
                P R++        F   K     + G                  + ++ F EF+ 
Sbjct: 206 -----PMRVL--------FLIPKNSPPTLEG------------------QYSKPFKEFVE 234

Query: 191 PMLAYDPKLRATAADCLQHPWL 212
             L  DP+ R TA + L+H ++
Sbjct: 235 ACLNKDPRFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG0671|consensus	415		100.0
KOG0660|consensus	359		100.0
KOG0659|consensus	318		100.0
KOG0593|consensus	396		100.0
KOG0667|consensus	586		100.0
KOG0661|consensus	538		100.0
KOG0658|consensus	364		100.0
KOG0581|consensus	364		100.0
KOG0663|consensus	419		100.0
KOG0600|consensus	560		100.0
KOG0594|consensus	323		100.0
KOG1290|consensus	590		100.0
KOG0615|consensus	475		100.0
KOG0588|consensus	786		100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0575|consensus	592		100.0
KOG0592|consensus	604		100.0
KOG0616|consensus	355		100.0
KOG0662|consensus	292		100.0
KOG0599|consensus	411		100.0
KOG0666|consensus	438		99.98
KOG0583|consensus	370		99.98
KOG0033|consensus	355		99.98
KOG0578|consensus	550		99.98
KOG0598|consensus	357		99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
KOG0669|consensus	376		99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
KOG0665|consensus	369		99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0582|consensus	516		99.97
KOG0605|consensus	550		99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
KOG0597|consensus	808		99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
KOG0591|consensus	375		99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
KOG4717|consensus	864		99.97
KOG0198|consensus	313		99.96
KOG0694|consensus	694		99.96
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.96
KOG0670|consensus	752		99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.96
KOG0201|consensus	467		99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.96
KOG0032|consensus	382		99.96
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.96
KOG0604|consensus	400		99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.96
KOG0983|consensus	391		99.96
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.95
KOG0664|consensus	449		99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.95
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.95
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.95
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.95
PHA03210	501	serine/threonine kinase US3; Provisional	99.95
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.95
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.95
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.95
KOG0579|consensus	1187		99.95
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.95
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.95
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.95
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.95
KOG0596|consensus	677		99.95
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.95
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.95
KOG0585|consensus	576		99.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
KOG0668|consensus	338		99.95
KOG0595|consensus	429		99.95
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.95
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.95
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.95
KOG0577|consensus	948		99.95
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.95
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
KOG0192|consensus	362		99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.94
KOG0603|consensus	612		99.94
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.94
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
KOG0986|consensus	591		99.94
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.94
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.94
KOG0580|consensus	281		99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.94
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.94
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
KOG0589|consensus	426		99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
KOG0574|consensus	502		99.94
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
KOG0610|consensus	459		99.93
PHA02988	283	hypothetical protein; Provisional	99.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.93
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.93
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.93
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.93
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.93
KOG0690|consensus	516		99.93
KOG0584|consensus	632		99.93
KOG4279|consensus	1226		99.93
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
KOG0197|consensus	468		99.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.93
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.93
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.93
KOG0611|consensus	668		99.93
KOG4645|consensus	1509		99.93
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.93
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.93
KOG4721|consensus	904		99.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.92
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
PLN00009	294	cyclin-dependent kinase A; Provisional	99.92
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.92
KOG0612|consensus	1317		99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.92
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.92
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.92
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.92
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.92
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.92
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
KOG0614|consensus	732		99.92
KOG1006|consensus	361		99.92
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.92
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.92
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.92
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.91
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.91
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.91
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.91
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.91
PHA02882	294	putative serine/threonine kinase; Provisional	99.91
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.91
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.91
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.91
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.91
KOG0696|consensus	683		99.91
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.91
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.91
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.91
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.91
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.91
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.91
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.9
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.9
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.9
KOG0586|consensus	596		99.9
KOG1167|consensus	418		99.9
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.9
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.9
KOG1026|consensus	774		99.9
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.9
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.9
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.9
KOG1989|consensus	738		99.9
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.9
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.9
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.9
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.9
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.9
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.9
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.9
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
KOG1035|consensus	1351		99.9
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.9
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.9
KOG0607|consensus	463		99.9
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.89
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.89
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.89
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.89
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.89
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.89
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.89
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.89
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.89
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.89
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.89
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.89
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.89
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.89
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.89
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.89
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.89
KOG4236|consensus	888		99.88
KOG2345|consensus	302		99.88
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.88
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.88
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.88
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.88
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.88
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.88
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.88
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.88
KOG1027|consensus	903		99.88
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.88
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.88
KOG0193|consensus	678		99.88
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.88
KOG0608|consensus	1034		99.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.88
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.88
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.88
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.87
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.87
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.87
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.87
KOG1095|consensus	1025		99.87
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.87
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.87
KOG0587|consensus	953		99.87
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.87
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.87
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.87
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.87
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.87
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.87
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.87
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.87
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.87
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.87
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.87
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.87
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.87
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.86
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.86
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.86
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.86
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.86
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.86
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.86
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.86
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.86
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.86
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.86
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.86
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.86
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.86
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.85
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.85
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.85
KOG0695|consensus	593		99.85
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.85
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.85
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.85
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
KOG4257|consensus	974		99.85
KOG0194|consensus	474		99.85
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.85
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.84
KOG4278|consensus	1157		99.84
KOG1187|consensus	361		99.84
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.84
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.84
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.84
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.84
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.84
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.84
KOG0984|consensus	282		99.84
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.83
KOG0196|consensus	996		99.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.83
KOG2052|consensus	513		99.83
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.82
KOG1151|consensus	775		99.82
KOG0590|consensus	601		99.81
KOG1094|consensus	807		99.81
KOG0200|consensus	609		99.81
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.8
KOG4250|consensus	732		99.79
KOG0576|consensus	829		99.78
KOG0199|consensus	1039		99.77
KOG3653|consensus	534		99.76
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.75
KOG1024|consensus	563		99.72
KOG0606|consensus	1205		99.71
KOG1025|consensus	1177		99.67
KOG0603|consensus	612		99.65
KOG1033|consensus	516		99.64
KOG1152|consensus	772		99.62
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.62
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.54
KOG1240|consensus	1431		99.51
KOG1345|consensus	378		99.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.44
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.4
KOG4158|consensus	598		99.36
KOG1023|consensus	484		99.15
KOG0195|consensus	448		99.12
KOG0590|consensus	601		99.04
KOG1165|consensus	449		99.01
KOG0606|consensus	1205		98.84
KOG1164|consensus	322		98.83
KOG1163|consensus	341		98.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.7
KOG1166|consensus	974		98.63
PRK12274	218	serine/threonine protein kinase; Provisional	98.63
KOG2137|consensus	700		98.62
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.56
PRK09188	365	serine/threonine protein kinase; Provisional	98.49
KOG0601|consensus	524		98.45
COG4248	637	Uncharacterized protein with protein kinase and he	97.96
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.94
KOG1266|consensus	458		97.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.79
KOG0601|consensus	524		97.6
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.44
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.39
smart00090	237	RIO RIO-like kinase.	97.23
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.03
PRK10345	210	hypothetical protein; Provisional	96.87
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.82
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	96.76
PRK14879	211	serine/threonine protein kinase; Provisional	96.49
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.46
KOG1093|consensus	725		96.37
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.27
KOG1243|consensus	690		96.12
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	96.04
KOG0576|consensus	829		95.68
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.63
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	95.61
KOG1826|consensus	2724		95.31
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.2
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	94.99
KOG3087|consensus	229		94.51
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	94.49
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	93.17
KOG1035|consensus	1351		92.48
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	89.63
PRK10271	188	thiK thiamine kinase; Provisional	88.78
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	88.04
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	87.35
KOG0592|consensus	604		87.19
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	85.95
KOG1006|consensus	361		85.94
PRK09902	216	hypothetical protein; Provisional	85.64
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	85.3
COG0661	517	AarF Predicted unusual protein kinase [General fun	84.2
KOG0615|consensus	475		84.18
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	83.71
KOG0671|consensus	415		83.7
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	83.33
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	83.24
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	83.12
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	83.12
PF01636	239	APH: Phosphotransferase enzyme family This family	82.75
KOG0595|consensus	429		82.52
PRK05231	319	homoserine kinase; Provisional	82.43
KOG0581|consensus	364		81.01
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	80.56

>KOG0671|consensus

Probab=100.00  E-value=3e-41  Score=255.69  Aligned_cols=197  Identities=26%  Similarity=0.466  Sum_probs=153.2

Q ss_pred             hhccCchhhhhHHHHHHhhhcccccccccccccccc----cccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHh
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQ----YRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI   83 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~~~~h~d~k~~n----il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~   83 (214)
                      ++|..+++|+|+||    +|+|++++.+.....+.+    +....+..++++|||.|....+..+..+.|.+|+|||+++
T Consensus       207 fLh~~kl~HTDLKP----ENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL  282 (415)
T KOG0671|consen  207 FLHDLKLTHTDLKP----ENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL  282 (415)
T ss_pred             HHHhcceeecCCCh----heEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchhee
Confidence            67899999999999    999999988554333333    3455578999999999998888888899999999999999


Q ss_pred             cCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCC
Q psy16751         84 NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLK  163 (214)
Q Consensus        84 ~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (214)
                      |.+|+.++||||+||||.|+++|..+|.+++      +.+++++|.+++|++|..+..+......+....-.+.+....+
T Consensus       283 gLGwS~pCDvWSiGCIL~ElytG~~LFqtHe------n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~  356 (415)
T KOG0671|consen  283 GLGWSQPCDVWSIGCILVELYTGETLFQTHE------NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKG  356 (415)
T ss_pred             ccCcCCccCceeeeeEEEEeeccceecccCC------cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccc
Confidence            9999999999999999999999999999776      7999999999999999998877653333333322222211111


Q ss_pred             C----CchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        164 P----WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       164 ~----~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .    .+.-..+..-....+.+...+.|||++||.+||.+|+|+.|||+||||+.
T Consensus       357 ~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~  411 (415)
T KOG0671|consen  357 KSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFAR  411 (415)
T ss_pred             cchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence            0    00001111112234566778999999999999999999999999999973

>KOG0660|consensus

Probab=100.00  E-value=1.2e-39  Score=245.72  Aligned_cols=168  Identities=29%  Similarity=0.439  Sum_probs=136.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceecc-----CCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD-----KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~-----~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~  102 (214)
                      +|+-+++|||+||+|++++.++.+||+|||+|+..+     ...+..+.|.+|+|||+++.. .|+.+.||||+|||++|
T Consensus       141 iHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AE  220 (359)
T KOG0660|consen  141 IHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAE  220 (359)
T ss_pred             hhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHH
Confidence            566667999999999999999999999999999884     345778999999999999876 69999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      |++|+++|.+.+      ...|+..|...+|.|+++.+.........    ....+.+...+..+...+       +...
T Consensus       221 mL~gkplFpG~d------~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar----~yi~slp~~p~~~f~~~f-------p~a~  283 (359)
T KOG0660|consen  221 MLTGKPLFPGKD------YVHQLQLILELLGTPSEEDLQKIRSEKAR----PYIKSLPQIPKQPFSSIF-------PNAN  283 (359)
T ss_pred             HHcCCCCCCCCc------hHHHHHHHHHhcCCCCHHHHHHhccHHHH----HHHHhCCCCCCCCHHHHc-------CCCC
Confidence            999999999766      79999999999999988877654322110    012223344444433332       3456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+.||+.+||.+||.+|+||+|+|+|||+.
T Consensus       284 p~AidLlekmL~fdP~kRita~eAL~hPYl~  314 (359)
T KOG0660|consen  284 PLAIDLLEKMLVFDPKKRITAEEALAHPYLA  314 (359)
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcChhhh
Confidence            6788999999999999999999999999985

>KOG0659|consensus

Probab=100.00  E-value=3.2e-39  Score=234.45  Aligned_cols=180  Identities=23%  Similarity=0.383  Sum_probs=143.7

Q ss_pred             hhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-C
Q psy16751         15 EETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-G   86 (214)
Q Consensus        15 ~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~   86 (214)
                      ...|+|....  +..  .||.+.++|||+||.|+|+.++|.+||+|||+|+.+..+   ....+-|++|||||+++|. .
T Consensus        99 ~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~  178 (318)
T KOG0659|consen   99 SPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQ  178 (318)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchh
Confidence            5556655211  222  388888899999999999999999999999999998754   3344889999999999998 5


Q ss_pred             CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCc
Q psy16751         87 YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD  166 (214)
Q Consensus        87 ~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (214)
                      |+..+|+||+||+++|++.|.+.|.+.+      +.+|+..|.+.+|+|.++-+........|..-+    ..|...-..
T Consensus       179 Yg~~VDmWavGCI~AELllr~P~fpG~s------DidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~----~~P~~~~~~  248 (318)
T KOG0659|consen  179 YGTGVDMWAVGCIFAELLLRVPFFPGDS------DIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ----QFPKPPLNN  248 (318)
T ss_pred             cCCcchhhhHHHHHHHHHccCCCCCCCc------hHHHHHHHHHHcCCCCcccCccccccccHHHHh----cCCCCcccc
Confidence            9999999999999999999999999777      799999999999999888777666655553322    111111111


Q ss_pred             hhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                .-+..+.++.||+.+||.+||.+|+|+.|+|+|+||++
T Consensus       249 ----------lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  249 ----------LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             ----------ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence                      22445566789999999999999999999999999974

>KOG0593|consensus

Probab=100.00  E-value=1.7e-39  Score=239.95  Aligned_cols=185  Identities=24%  Similarity=0.398  Sum_probs=143.7

Q ss_pred             CchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhc
Q psy16751         12 GSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLIN   84 (214)
Q Consensus        12 ~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~   84 (214)
                      +++...-+|..+|  +.  +.||.++++|||+||+||++..+|.+||+|||.|+...   +.++.++.|+||||||++.|
T Consensus        96 ~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvG  175 (396)
T KOG0593|consen   96 NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVG  175 (396)
T ss_pred             CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcc
Confidence            3444444555444  22  35999999999999999999999999999999999875   45677899999999999999


Q ss_pred             C-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCC
Q psy16751         85 A-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLK  163 (214)
Q Consensus        85 ~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (214)
                      . +|+.++||||+||++.||++|.++|.+..      +.+|+..|...+|...++...--.....+..-.  ++......
T Consensus       176 DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S------DiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~--lP~~~~~e  247 (396)
T KOG0593|consen  176 DTQYGKPVDIWAIGCVFAELLTGEPLWPGRS------DIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR--LPEPEHPE  247 (396)
T ss_pred             cCcCCCcccchhhhHHHHHHhcCCcCCCCcc------hHHHHHHHHHHHcccCHHHHHHhccCCceeeee--cCCCCCcc
Confidence            5 89999999999999999999999999766      799999999999998887654433333322211  11111111


Q ss_pred             CCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        164 PWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                            .+..++   +..+..+.||+.+||..||.+|+|.+|+|.||||.
T Consensus       248 ------pLe~k~---p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  248 ------PLERKY---PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             ------chhhhc---ccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence                  122222   33445778999999999999999999999999995

>KOG0667|consensus

Probab=100.00  E-value=4.6e-39  Score=258.39  Aligned_cols=180  Identities=28%  Similarity=0.462  Sum_probs=146.2

Q ss_pred             cccccccccccccccccccCC--CcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .++..+++|.|+||+|||+..  ...|||||||+|+...+.....+.++.|||||+++|.+|+.+.||||||||++||++
T Consensus       304 ~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~t  383 (586)
T KOG0667|consen  304 FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFT  383 (586)
T ss_pred             HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhc
Confidence            466777899999999999865  468999999999999888778999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc-cCccccC---C---CC---CCCchhhHHHhhc
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK-KGELRHI---P---GL---KPWDLYSVLVEKY  175 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~---~---~~---~~~~~~~~~~~~~  175 (214)
                      |.++|.+.+      +.+|++.|.+.+|.||..++..+.+...+|+. .+.+...   .   +.   ..+..........
T Consensus       384 G~PLfpG~n------e~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  457 (586)
T KOG0667|consen  384 GEPLFPGDN------EYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLER  457 (586)
T ss_pred             CccccCCCC------HHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccc
Confidence            999999877      89999999999999999999999998888877 4433210   0   00   0001000000111


Q ss_pred             -----------CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        176 -----------NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       176 -----------~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                 .........+.|||.+||++||.+|+|+.++|+||||.
T Consensus       458 ~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~  506 (586)
T KOG0667|consen  458 RGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLT  506 (586)
T ss_pred             cCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence                       11224567889999999999999999999999999997

>KOG0661|consensus

Probab=100.00  E-value=4.8e-39  Score=249.68  Aligned_cols=193  Identities=28%  Similarity=0.454  Sum_probs=146.8

Q ss_pred             chhhhhccCch-hhhhHHHHHH--hhhc--ccccccccccccccccccCCCcceEEeecCCceecc--CCCCCCCcCCcc
Q psy16751          4 IFNFFVAFGSL-EETDKKRRLY--IRNA--CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD--KHFTEDVQTRQY   76 (214)
Q Consensus         4 l~~~~~~~~~~-~~~d~k~~~~--~~~~--~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~y   76 (214)
                      |+..+...+++ .+.+++-..|  ++.+  .|-|+.+|||+||+|||+..+..+||+|||+||...  .+++.++.|+||
T Consensus        96 LYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWY  175 (538)
T KOG0661|consen   96 LYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWY  175 (538)
T ss_pred             HHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccc
Confidence            44445555443 4445533322  4444  455555999999999999999999999999999885  457788999999


Q ss_pred             cchHHHhcCC-CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~-~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      ||||+++..+ |+.+.|+||+|||++|+++-+++|.|.+      +.+|+.+|++.+|+|....+..+.......     
T Consensus       176 RAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s------E~Dqi~KIc~VLGtP~~~~~~eg~~La~~m-----  244 (538)
T KOG0661|consen  176 RAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS------EIDQIYKICEVLGTPDKDSWPEGYNLASAM-----  244 (538)
T ss_pred             cchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc------HHHHHHHHHHHhCCCccccchhHHHHHHHh-----
Confidence            9999999875 9999999999999999999999999877      899999999999999876555432211110     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .-..|...+..+...+       +..+.++.+||.+||.|||.+||||.|+|+||||+.
T Consensus       245 nf~~P~~~~~~l~~L~-------p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~  296 (538)
T KOG0661|consen  245 NFRFPQVKPSPLKDLL-------PNASSEAASLIERLLAWDPDKRPTASQALQHPFFQV  296 (538)
T ss_pred             ccCCCcCCCCChHHhC-------cccCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence            0112333333333222       336778899999999999999999999999999973

>KOG0658|consensus

Probab=100.00  E-value=5.9e-38  Score=236.92  Aligned_cols=193  Identities=22%  Similarity=0.347  Sum_probs=148.9

Q ss_pred             cchhhhhc----cCchhhhhHHHHHH--h--hhcccccccccccccccccccCCC-cceEEeecCCceec--cCCCCCCC
Q psy16751          3 SIFNFFVA----FGSLEETDKKRRLY--I--RNACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWV--DKHFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~----~~~~~~~d~k~~~~--~--~~~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~--~~~~~~~~   71 (214)
                      +|.+++.+    ..++.-.++|...|  +  -+.+|.+++.|||+||+|+|++.. |.+||+|||+|+..  +++....+
T Consensus       107 tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYi  186 (364)
T KOG0658|consen  107 TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYI  186 (364)
T ss_pred             HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEE
Confidence            34444443    56666677765433  2  234666777999999999999885 99999999999987  45666779


Q ss_pred             cCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         72 QTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        72 ~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      .|+.|||||+++|. .|+.+.||||.||+++||+.|+++|.+.+      ..+|++.|.+.+|.|..+.+.........+
T Consensus       187 cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s------~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~  260 (364)
T KOG0658|consen  187 CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS------SVDQLVEIIKVLGTPTREDIKSMNPNYTEF  260 (364)
T ss_pred             EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC------HHHHHHHHHHHhCCCCHHHHhhcCcccccc
Confidence            99999999999998 59999999999999999999999999866      689999999999999988776543332111


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                             ..+...+..+..      ......+++..+|+.++|+++|.+|.|+.|+|+||||++
T Consensus       261 -------~~p~ik~~~~~~------~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde  311 (364)
T KOG0658|consen  261 -------KFPQIKAHPWHK------VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE  311 (364)
T ss_pred             -------cCccccccccee------ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence                   111222212111      123455678889999999999999999999999999973

>KOG0581|consensus

Probab=100.00  E-value=3.9e-37  Score=232.92  Aligned_cols=169  Identities=22%  Similarity=0.309  Sum_probs=128.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhhcc--c-ccccccccccccccccCCCcceEEeecCCceec-cCCCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRNAC--W-VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV-DKHFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~~~--~-~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~~~y   76 (214)
                      +|..++...+++.+..+-....  ++.+.  | .+.++|||+||+|+|+...|.|||+|||.+... ++.+.+.+||..|
T Consensus       164 SLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~Y  243 (364)
T KOG0581|consen  164 SLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAY  243 (364)
T ss_pred             CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccc
Confidence            4556666666665555533221  33332  2 245699999999999999999999999999877 4567888999999


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      ||||.+.+..|+.++||||+|++++|++.|+.|+.+.. .+   ....+..+..++..+|+.                  
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~-~~---~~~~~~Ll~~Iv~~ppP~------------------  301 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN-PP---YLDIFELLCAIVDEPPPR------------------  301 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC-CC---CCCHHHHHHHHhcCCCCC------------------
Confidence            99999999999999999999999999999999997641 11   123333333333333321                  


Q ss_pred             ccCCCCCCCchhhHHHhhcCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTP-ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                          .|. .+++++++|+..||+.||++|+|+.|+|+|||++
T Consensus       302 --------------------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  302 --------------------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             --------------------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence                                123 3678899999999999999999999999999986

>KOG0663|consensus

Probab=100.00  E-value=1.8e-36  Score=226.60  Aligned_cols=170  Identities=26%  Similarity=0.333  Sum_probs=136.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|||+|++|+|+...|.+||+|||+|+.++++   .+..+-|.+|||||+++|.. |+.+.|+||+|||++|++
T Consensus       193 lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l  272 (419)
T KOG0663|consen  193 LHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELL  272 (419)
T ss_pred             HhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHH
Confidence            56666799999999999999999999999999999876   66779999999999999985 999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      ++.++|.+..      +.+|+.+|.+.+|+|...++........+-.  ...       .....+.+..++..-. .+..
T Consensus       273 ~~kPlf~G~s------E~dQl~~If~llGtPte~iwpg~~~lp~~k~--~~f-------~~~pyn~lr~kF~~~~-lse~  336 (419)
T KOG0663|consen  273 TQKPLFPGKS------EIDQLDKIFKLLGTPSEAIWPGYSELPAVKK--MTF-------SEHPYNNLRKKFGALS-LSEQ  336 (419)
T ss_pred             hcCCCCCCCc------hHHHHHHHHHHhCCCccccCCCccccchhhc--ccc-------CCCCchhhhhhccccc-cchh
Confidence            9999999766      8999999999999998887765544432210  000       0111122222222221 3456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+|+.++|.+||.+|.||+|+|+|+||++
T Consensus       337 g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  337 GFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             HHHHHHHHhccCccccccHHHhhccccccc
Confidence            789999999999999999999999999974

>KOG0600|consensus

Probab=100.00  E-value=2.8e-36  Score=235.81  Aligned_cols=181  Identities=22%  Similarity=0.340  Sum_probs=142.1

Q ss_pred             chhhhhHHHH--HHhhhc--ccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCCcccchHHHhc
Q psy16751         13 SLEETDKKRR--LYIRNA--CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTRQYRSLEVLIN   84 (214)
Q Consensus        13 ~~~~~d~k~~--~~~~~~--~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~~y~aPE~~~~   84 (214)
                      ++.+.++|..  ..++.+  ||...++|||+|.+|||++.+|.+||+|||+|+..+.    .++..+-|+||||||+++|
T Consensus       214 kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG  293 (560)
T KOG0600|consen  214 KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLG  293 (560)
T ss_pred             ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcC
Confidence            6788888773  234443  7777779999999999999999999999999997742    4677799999999999999


Q ss_pred             C-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCC
Q psy16751         85 A-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLK  163 (214)
Q Consensus        85 ~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (214)
                      . .|+.++|+||+|||+.||+.|+++|.+.+      +.+|+.+|.+++|.|.+..+....-+.  +         ...+
T Consensus       294 ~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t------EveQl~kIfklcGSP~e~~W~~~kLP~--~---------~~~k  356 (560)
T KOG0600|consen  294 ATSYGTAVDLWSVGCILAELFLGKPILQGRT------EVEQLHKIFKLCGSPTEDYWPVSKLPH--A---------TIFK  356 (560)
T ss_pred             CcccccceeehhhhHHHHHHHcCCCCcCCcc------HHHHHHHHHHHhCCCChhccccccCCc--c---------cccC
Confidence            8 69999999999999999999999999877      899999999999999887755221110  0         0111


Q ss_pred             CCch-hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        164 PWDL-YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       164 ~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +... ...+...+   ...+....+|+..||..||++|.||.++|+|+||.
T Consensus       357 p~~~y~r~l~E~~---~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  357 PQQPYKRRLRETF---KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             CCCcccchHHHHh---ccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence            1111 11111111   33455678999999999999999999999999994

>KOG0594|consensus

Probab=100.00  E-value=3.9e-36  Score=226.82  Aligned_cols=168  Identities=27%  Similarity=0.418  Sum_probs=135.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .||.+.++|||+||+|++++++|.+||+|||+|+...   ..++..++|.+|+|||+++|. .|+...||||+||+++||
T Consensus       135 ~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm  214 (323)
T KOG0594|consen  135 FLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEM  214 (323)
T ss_pred             HHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHH
Confidence            4899999999999999999999999999999999775   335667999999999999998 699999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCC-CCchhhHHHhhcCCChhhH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLK-PWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++++++|.+..      +.+|+..|.+.+|+|..+.+........+-.      ..+... +......+       +...
T Consensus       215 ~~~~~LFpG~s------e~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~------~f~~~~~~~~l~~~~-------~~~~  275 (323)
T KOG0594|consen  215 FTRRPLFPGDS------EIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA------PFPKWPGPKDLSSIL-------PKLD  275 (323)
T ss_pred             HhCCCCCCCCc------HHHHHHHHHHHcCCCCccCCCCccccccccc------cCcCCCCccchHHhc-------cccC
Confidence            99999999776      7999999999999998876655444333211      111111 11111111       1112


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+++.+||+++|.+|.||+.+|.||||++
T Consensus       276 ~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~  307 (323)
T KOG0594|consen  276 PDGIELLSKLLQYDPAKRISAKGALTHPYFSE  307 (323)
T ss_pred             ccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence            46689999999999999999999999999974

>KOG1290|consensus

Probab=100.00  E-value=1.9e-35  Score=230.33  Aligned_cols=165  Identities=64%  Similarity=1.197  Sum_probs=161.3

Q ss_pred             CcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHH
Q psy16751         49 PFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHI  128 (214)
Q Consensus        49 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~  128 (214)
                      ...|||+|||.|+.....++..+.|+.|||||+++|.+|+..+||||++|+++||+||..+|.++.+.++..+.++++.|
T Consensus       390 di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i  469 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI  469 (590)
T ss_pred             ceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence            45899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       129 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++++|..|..+.-.++....+|...+.++.+.++++|++.+.+.+++.++...+.++.+||.-||+++|++|+||.++|+
T Consensus       470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy16751        209 HPWLQ  213 (214)
Q Consensus       209 hp~f~  213 (214)
                      |||++
T Consensus       550 hPwLn  554 (590)
T KOG1290|consen  550 HPWLN  554 (590)
T ss_pred             Ccccc
Confidence            99997

>KOG0615|consensus

Probab=100.00  E-value=1.8e-36  Score=231.80  Aligned_cols=169  Identities=24%  Similarity=0.339  Sum_probs=130.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhhc--ccccccccccccccccccCCC---cceEEeecCCceecc--CCCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRNA--CWVDKHFTEDVQTRQYRSLPP---FLFDIGTYRNACWVD--KHFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~~--~~~~~~~h~d~k~~nil~~~~---~~~kl~Dfg~a~~~~--~~~~~~~~~   73 (214)
                      |||+.++..+.+-+.+.|..++  ++.+  +|..++.|||+||+|||+..+   ..+||+|||+|+..+  +..++.+||
T Consensus       262 eLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGT  341 (475)
T KOG0615|consen  262 ELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGT  341 (475)
T ss_pred             cHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCC
Confidence            6889888888888888877544  5555  666677999999999998776   899999999999884  567888999


Q ss_pred             CcccchHHHhcCC---CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         74 RQYRSLEVLINAG---YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        74 ~~y~aPE~~~~~~---~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      |.|.|||++.+.+   +..++||||+||++|-+++|.+||....+..     -...+|.+  |...             +
T Consensus       342 psYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-----sl~eQI~~--G~y~-------------f  401 (475)
T KOG0615|consen  342 PSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-----SLKEQILK--GRYA-------------F  401 (475)
T ss_pred             ccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-----cHHHHHhc--Cccc-------------c
Confidence            9999999999875   3458899999999999999999997543211     01111111  1100             0


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                .             .......+.+.++||.+||+.||+.|||++|||+||||+.
T Consensus       402 ----------~-------------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~  442 (475)
T KOG0615|consen  402 ----------G-------------PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD  442 (475)
T ss_pred             ----------c-------------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence                      0             0012456678899999999999999999999999999973

>KOG0588|consensus

Probab=100.00  E-value=3.8e-35  Score=235.97  Aligned_cols=162  Identities=22%  Similarity=0.377  Sum_probs=135.9

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhh-----cccccccccccccccccccCCCcceEEeecCCceec--cCCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRN-----ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV--DKHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~-----~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~--~~~~~~~~~~~~   75 (214)
                      +||+|++.++++.+++... +|-+.     .||..++.|||+||+|++++..+.+||+|||+|...  +....+.||+|+
T Consensus        98 ELFdylv~kG~l~e~eaa~-ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPH  176 (786)
T KOG0588|consen   98 ELFDYLVRKGPLPEREAAH-FFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPH  176 (786)
T ss_pred             hhHHHHHhhCCCCCHHHHH-HHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcc
Confidence            6999999999999999843 44332     377778899999999999999988999999999866  456778899999


Q ss_pred             ccchHHHhcCCCC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         76 YRSLEVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        76 y~aPE~~~~~~~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      |.|||++.|.+|. .++||||.||||+.|++|..||..++       ..++-..++.                       
T Consensus       177 YA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-------ir~LLlKV~~-----------------------  226 (786)
T KOG0588|consen  177 YAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-------IRVLLLKVQR-----------------------  226 (786)
T ss_pred             cCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-------HHHHHHHHHc-----------------------
Confidence            9999999999986 69999999999999999999997333       3333322221                       


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                        ..+.+|.+.+.++.+||++||..||++|+|.+|+++|||+.
T Consensus       227 ------------------G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~  267 (786)
T KOG0588|consen  227 ------------------GVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLS  267 (786)
T ss_pred             ------------------CcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence                              12346788889999999999999999999999999999985

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=5.6e-34  Score=233.82  Aligned_cols=203  Identities=21%  Similarity=0.358  Sum_probs=139.2

Q ss_pred             chhhhhccCchhhhhHHHHHH--hhh--ccccc-ccccccccccccccCCCc----------------ceEEeecCCcee
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IRN--ACWVD-KHFTEDVQTRQYRSLPPF----------------LFDIGTYRNACW   62 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~-~~~h~d~k~~nil~~~~~----------------~~kl~Dfg~a~~   62 (214)
                      |.+++.+...+.+..++..++  +..  .+|.+ .++|+|+||+||++...+                .+||+|||.+..
T Consensus       218 l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        218 LLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence            555565555565555544322  222  25543 679999999999997655                499999999876


Q ss_pred             ccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhc
Q psy16751         63 VDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQS  142 (214)
Q Consensus        63 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  142 (214)
                      ........+||+.|+|||++.+..|+.++||||+||+++||++|++||.+.+      ..+++..+.+.+|.+|..+...
T Consensus       298 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~  371 (467)
T PTZ00284        298 ERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD------NLEHLHLMEKTLGRLPSEWAGR  371 (467)
T ss_pred             CccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHcCCCCHHHHhh
Confidence            6555566789999999999999999999999999999999999999998655      6788888999999998877643


Q ss_pred             cCCc--cccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        143 GHRS--SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       143 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ....  ..++...+....  ...+....................+.|||.+||++||++|+|++|+|+||||++
T Consensus       372 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~  443 (467)
T PTZ00284        372 CGTEEARLLYNSAGQLRP--CTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK  443 (467)
T ss_pred             ccchhHHHHhhhcccccc--cCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence            2211  112211111110  000000000000000000112456789999999999999999999999999974

>KOG0575|consensus

Probab=100.00  E-value=2.3e-34  Score=229.58  Aligned_cols=161  Identities=20%  Similarity=0.340  Sum_probs=129.2

Q ss_pred             cchhhhhccCchhhhhHHHHHHhh----hc--ccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIR----NA--CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~----~~--~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~   73 (214)
                      +|-.++...+.+++..+.  .|+.    .+  +|.+.++|||+|-.|++++++-.|||+|||+|....   +...+.+||
T Consensus       104 sL~el~Krrk~ltEpEar--y~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGT  181 (592)
T KOG0575|consen  104 SLMELLKRRKPLTEPEAR--YFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGT  181 (592)
T ss_pred             cHHHHHHhcCCCCcHHHH--HHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCC
Confidence            444555555556666662  2322    22  666777999999999999999999999999999875   567788999


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      |-|.|||++...+++..+||||+||++|-|+.|+|||...+      -.+.+.+|...                      
T Consensus       182 PNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------vkety~~Ik~~----------------------  233 (592)
T KOG0575|consen  182 PNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------VKETYNKIKLN----------------------  233 (592)
T ss_pred             CcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------HHHHHHHHHhc----------------------
Confidence            99999999999999999999999999999999999997543      23344443321                      


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                          .+.+|...+.++.+||.+||+.||.+|||++++|.|+||+
T Consensus       234 --------------------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  234 --------------------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             --------------------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence                                2335566777889999999999999999999999999995

>KOG0592|consensus

Probab=100.00  E-value=6.3e-34  Score=224.41  Aligned_cols=162  Identities=19%  Similarity=0.333  Sum_probs=133.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH----hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-----------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY----IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----------   65 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~----~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----------   65 (214)
                      ||++|+.+-+.+-+...+  .|    +..  .+|.++++|||+||+|||++.++.++|+|||.|+.+..           
T Consensus       160 dll~~i~K~Gsfde~caR--~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~  237 (604)
T KOG0592|consen  160 DLLDLIKKYGSFDETCAR--FYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDP  237 (604)
T ss_pred             cHHHHHHHhCcchHHHHH--HHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCc
Confidence            677888888877776663  33    222  27777789999999999999999999999999998842           


Q ss_pred             -----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHh
Q psy16751         66 -----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRII  140 (214)
Q Consensus        66 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  140 (214)
                           .....+||-.|-+||++.....++.+|||+|||++|+|+.|++||.+.+      +-..+.+|+.+-        
T Consensus       238 ~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N------eyliFqkI~~l~--------  303 (604)
T KOG0592|consen  238 NQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN------EYLIFQKIQALD--------  303 (604)
T ss_pred             ccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc------HHHHHHHHHHhc--------
Confidence                 1134699999999999999999999999999999999999999998765      455556665542        


Q ss_pred             hccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        141 QSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                                        +.+++..++.++||+.++|..||++|+|+.|+.+||||.+
T Consensus       304 ----------------------------------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  304 ----------------------------------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             ----------------------------------ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence                                              2344555677899999999999999999999999999974

>KOG0616|consensus

Probab=100.00  E-value=7.9e-34  Score=209.28  Aligned_cols=162  Identities=18%  Similarity=0.268  Sum_probs=139.0

Q ss_pred             cchhhhhccCchhhhhHHHHHHhh------hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIR------NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~------~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y   76 (214)
                      +||.++.+.++..+...+.  |..      ..+|...+++||+||+|++++++|.+||+|||.|+.+.....+.+|||.|
T Consensus       130 ElFS~Lrk~~rF~e~~arF--YAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeY  207 (355)
T KOG0616|consen  130 ELFSYLRKSGRFSEPHARF--YAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEY  207 (355)
T ss_pred             cHHHHHHhcCCCCchhHHH--HHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccc
Confidence            6899999999998887744  311      13677778999999999999999999999999999998888888999999


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      +|||++.+.+|+.++|.||+||++|||+.|.+||..++      .+....+|++.                         
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~------~~~iY~KI~~~-------------------------  256 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN------PIQIYEKILEG-------------------------  256 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC------hHHHHHHHHhC-------------------------
Confidence            99999999999999999999999999999999999766      46666666542                         


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                       +..+|+-.+.++++|+.++|+.|-.+|.     ...++..||||++
T Consensus       257 -----------------~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~  302 (355)
T KOG0616|consen  257 -----------------KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG  302 (355)
T ss_pred             -----------------cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence                             2335666778889999999999999995     4789999999974

>KOG0662|consensus

Probab=100.00  E-value=5.4e-33  Score=192.27  Aligned_cols=167  Identities=24%  Similarity=0.380  Sum_probs=132.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l  103 (214)
                      .||.|+..|||+||+|.++..+|.+|++|||+|+.++-+   ++..+-|.+|++|.+++|.. |+.+.|+||.||+++|+
T Consensus       116 fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifael  195 (292)
T KOG0662|consen  116 FCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL  195 (292)
T ss_pred             hhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHH
Confidence            489999999999999999999999999999999988754   45568899999999999986 99999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCC-CchhhHHHhhcCCChhh
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKP-WDLYSVLVEKYNWTPES  181 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  181 (214)
                      .. |.++|.+.+      -.+|+.+|.+.+|.+.+.-+........|-       ..|...+ ..+..+.       +..
T Consensus       196 anagrplfpg~d------vddqlkrif~~lg~p~ed~wps~t~lpdyk-------~yp~ypattswsqiv-------p~l  255 (292)
T KOG0662|consen  196 ANAGRPLFPGND------VDDQLKRIFRLLGTPTEDQWPSMTKLPDYK-------PYPIYPATTSWSQIV-------PKL  255 (292)
T ss_pred             hhcCCCCCCCCc------HHHHHHHHHHHhCCCccccCCccccCCCCc-------ccCCccccchHHHHh-------hhh
Confidence            87 778888655      689999999999998776554443332221       1111111 1111111       233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ....+||++++|.-+|.+|++|+.+||||||.+
T Consensus       256 ns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  256 NSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             cchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence            445689999999999999999999999999964

>KOG0599|consensus

Probab=100.00  E-value=1.6e-33  Score=206.17  Aligned_cols=167  Identities=20%  Similarity=0.334  Sum_probs=129.0

Q ss_pred             cchhhhhccCchhhhhHHH--HHHhhhc--ccccccccccccccccccCCCcceEEeecCCceec--cCCCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKR--RLYIRNA--CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV--DKHFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~--~~~~~~~--~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~--~~~~~~~~~~~~y   76 (214)
                      +|||||-.+-.+.+.....  ...++.+  +|..+++|||+||+|||++.+-.+||.|||.|+..  ++.....+|||.|
T Consensus       109 ELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgY  188 (411)
T KOG0599|consen  109 ELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGY  188 (411)
T ss_pred             hHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcc
Confidence            6899999888887766644  2334554  56667799999999999999999999999999977  4567778999999


Q ss_pred             cchHHHhcC------CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         77 RSLEVLINA------GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        77 ~aPE~~~~~------~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      .|||.+...      +|+..+|+||.||+++-++.|.+||....      .+-.+.+|.+  |...             |
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk------QmlMLR~Ime--Gkyq-------------F  247 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK------QMLMLRMIME--GKYQ-------------F  247 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH------HHHHHHHHHh--cccc-------------c
Confidence            999999753      69999999999999999999999997422      2222333322  1100             0


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .                       .+-..+.+.+.+||+++||+.||.+|+|++|+|+||||.
T Consensus       248 ~-----------------------speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  248 R-----------------------SPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             C-----------------------CcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            0                       001234566778999999999999999999999999994

>KOG0666|consensus

Probab=99.98  E-value=1.2e-33  Score=210.02  Aligned_cols=181  Identities=23%  Similarity=0.303  Sum_probs=133.2

Q ss_pred             ccccccccccccccccccCCC----cceEEeecCCceeccCCCCC------CCcCCcccchHHHhcC-CCCcchhhHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPP----FLFDIGTYRNACWVDKHFTE------DVQTRQYRSLEVLINA-GYDCSADIWSVA   97 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~----~~~kl~Dfg~a~~~~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~Diws~G   97 (214)
                      +|.+.++|||+||.||++..+    |.|||+|+|+|+.+..+...      .+-|.+|+|||+++|. .|+++.|+||+|
T Consensus       148 LH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiG  227 (438)
T KOG0666|consen  148 LHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIG  227 (438)
T ss_pred             HhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHH
Confidence            777778999999999999877    99999999999999765443      3678899999999998 499999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCC---CCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         98 CMAFELATGDYLFEPHAGDTY---TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+++|+++-.++|.+...+.-   .=..+|+.+|...+|.|....+...++...+...-...+.... ....+.. ....
T Consensus       228 CIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~-~n~sL~~-~~~~  305 (438)
T KOG0666|consen  228 CIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYY-DNVSLHK-YYHK  305 (438)
T ss_pred             HHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhc-CcchHHH-HHHH
Confidence            999999999999976532211   1236789999999999988877666665555322222111000 0000000 0001


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                         ...-++...+|+.+||++||.+|+|++++|+|+||.+
T Consensus       306 ---~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~  342 (438)
T KOG0666|consen  306 ---HKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE  342 (438)
T ss_pred             ---hcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence               1112234679999999999999999999999999974

>KOG0583|consensus

Probab=99.98  E-value=1.4e-32  Score=217.23  Aligned_cols=162  Identities=20%  Similarity=0.369  Sum_probs=131.1

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhh-----cccccccccccccccccccCCC-cceEEeecCCceec---cCCCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRN-----ACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWV---DKHFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~-----~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~---~~~~~~~~~~   73 (214)
                      |||+++...+++.+.+.+ .+|.+-     .||.+.++|||+|++|++++.+ +.+||+|||++...   +......+||
T Consensus       106 dL~~~i~~~g~l~E~~ar-~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGs  184 (370)
T KOG0583|consen  106 DLFDYIVNKGRLKEDEAR-KYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGS  184 (370)
T ss_pred             cHHHHHHHcCCCChHHHH-HHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCC
Confidence            799999998888886663 344332     3788888999999999999998 99999999999977   3567788999


Q ss_pred             CcccchHHHhcCC-CC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         74 RQYRSLEVLINAG-YD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        74 ~~y~aPE~~~~~~-~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      +.|+|||++.+.+ |+ .++||||+||++|.|++|..||...+      ......++.+                     
T Consensus       185 p~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l~~ki~~---------------------  237 (370)
T KOG0583|consen  185 PAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNLYRKIRK---------------------  237 (370)
T ss_pred             cccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHHHHHHhc---------------------
Confidence            9999999999988 87 79999999999999999999997422      1222222211                     


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhh-HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPES-ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                           ..+..+... +.++.+|+++||..||.+|+|+.+++.||||+
T Consensus       238 ---------------------~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~  279 (370)
T KOG0583|consen  238 ---------------------GEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ  279 (370)
T ss_pred             ---------------------CCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence                                 112233444 67889999999999999999999999999997

>KOG0033|consensus

Probab=99.98  E-value=1.6e-32  Score=198.03  Aligned_cols=143  Identities=23%  Similarity=0.300  Sum_probs=114.1

Q ss_pred             cccccccccccccccccccCC---CcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .||.++++|||+||.|.++-+   ..-+|++|||+|...+..  .-..+|||.|||||++...+|+.++|||+.||+++-
T Consensus       125 yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfi  204 (355)
T KOG0033|consen  125 YCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI  204 (355)
T ss_pred             HHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHH
Confidence            489999999999999999744   468999999999988632  344699999999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++.|.+||.+.+      .......|.+.--..+.                                      ...++.+
T Consensus       205 LL~G~~PF~~~~------~~rlye~I~~g~yd~~~--------------------------------------~~w~~is  240 (355)
T KOG0033|consen  205 LLVGYPPFWDED------QHRLYEQIKAGAYDYPS--------------------------------------PEWDTVT  240 (355)
T ss_pred             HHhCCCCCCCcc------HHHHHHHHhccccCCCC--------------------------------------cccCcCC
Confidence            999999998644      23333333321111111                                      0124566


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +++++|+++||+.||++|+||.|+|+|||.++
T Consensus       241 ~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  241 PEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            78899999999999999999999999999864

>KOG0578|consensus

Probab=99.98  E-value=2e-32  Score=216.97  Aligned_cols=141  Identities=20%  Similarity=0.243  Sum_probs=118.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+.++|||+|..||++..+|.+||+|||.|.....   .....+|||+|||||++....|+.++||||||++++||+
T Consensus       384 fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMv  463 (550)
T KOG0578|consen  384 FLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMV  463 (550)
T ss_pred             HHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHh
Confidence            46677779999999999999999999999999987753   355679999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      -|++||...+      ....+..|.. -|++..                                      ..+...+..
T Consensus       464 eGEPPYlnE~------PlrAlyLIa~-ng~P~l--------------------------------------k~~~klS~~  498 (550)
T KOG0578|consen  464 EGEPPYLNEN------PLRALYLIAT-NGTPKL--------------------------------------KNPEKLSPE  498 (550)
T ss_pred             cCCCCccCCC------hHHHHHHHhh-cCCCCc--------------------------------------CCccccCHH
Confidence            9999998544      4555554433 233321                                      134556778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ++|||.+||+.|+.+|++|.|+|+||||+
T Consensus       499 ~kdFL~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  499 LKDFLDRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             HHHHHHHHhhcchhcCCCHHHHhcChhhh
Confidence            99999999999999999999999999986

>KOG0598|consensus

Probab=99.97  E-value=3.9e-32  Score=205.74  Aligned_cols=139  Identities=17%  Similarity=0.207  Sum_probs=113.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|||+||+|||++..|.++|+|||+|+..   +....+.+||+.|||||++.+.+|+.++|.||+|+++|+|++
T Consensus       141 LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~  220 (357)
T KOG0598|consen  141 LHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLT  220 (357)
T ss_pred             HHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhh
Confidence            77788899999999999999999999999999855   234556799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |.+||.+.+      ......+|.+.-.                                         ...+.-.+.++
T Consensus       221 G~pPF~~~~------~~~~~~~I~~~k~-----------------------------------------~~~p~~ls~~a  253 (357)
T KOG0598|consen  221 GKPPFYAED------VKKMYDKILKGKL-----------------------------------------PLPPGYLSEEA  253 (357)
T ss_pred             CCCCCcCcc------HHHHHHHHhcCcC-----------------------------------------CCCCccCCHHH
Confidence            999998655      3344444432100                                         01122355677


Q ss_pred             HHHHHHccccCCCCCC----CHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRA----TAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~----t~~e~l~hp~f~~  214 (214)
                      ++|+.++|+.||++|.    .+.++-+||||+.
T Consensus       254 rdll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  254 RDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             HHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence            9999999999999996    5889999999974

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=3.8e-31  Score=204.47  Aligned_cols=167  Identities=23%  Similarity=0.388  Sum_probs=125.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++....   ......+++.|+|||.+.+. .++.++||||+||+++++
T Consensus       118 ~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l  197 (288)
T cd07871         118 YCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM  197 (288)
T ss_pred             HHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHH
Confidence            36777789999999999999999999999999976532   23345788999999999864 589999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|.+||.+.+      ..+.+..+.+..+.++............+....     .+.........       .....+.
T Consensus       198 ~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~  259 (288)
T cd07871         198 ATGRPMFPGST------VKEELHLIFRLLGTPTEETWPGITSNEEFRSYL-----FPQYRAQPLIN-------HAPRLDT  259 (288)
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhccccchhhhccc-----cCccCCCchHH-------hCCCCCH
Confidence            99999997654      567778888888888777655433322221100     01111111110       1123455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ++.+||.+||++||++|+|++|+|+||||
T Consensus       260 ~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         260 DGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            67899999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0669|consensus

Probab=99.97  E-value=2e-31  Score=193.17  Aligned_cols=173  Identities=20%  Similarity=0.303  Sum_probs=135.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-------CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~   99 (214)
                      .+|.+.++|||+|+.|+|++.+|.+||+|||+++.+..       .++.++-|.+|++||.++|. .|+++.|||+.||+
T Consensus       139 ~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCi  218 (376)
T KOG0669|consen  139 YIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCI  218 (376)
T ss_pred             HHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHH
Confidence            36677779999999999999999999999999987742       24556789999999999997 59999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +.+|++|.+.+.+.+      +..++..|..++|...++.+........+.+-.  ....+.-..++..++.. ++..  
T Consensus       219 maeMwtrspimqgnt------eqqql~~Is~LcGs~tkevWP~~d~lpL~~sie--~ePl~~~~~rkv~n~~k-p~~k--  287 (376)
T KOG0669|consen  219 MAEMWTRSPIMQGNT------EQQQLHLISQLCGSITKEVWPNVDNLPLYQSIE--LEPLPKGQKRKVKNRLK-PYVK--  287 (376)
T ss_pred             HHHHHccCccccCCh------HHHHHHHHHHHhccCCcccCCCcccchHHHhcc--CCCCCcchhhhhhhhcc-cccC--
Confidence            999999999999766      899999999999998888777666555443211  11122222222222221 1211  


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                        +.+..||+.+||.+||.+|++++++|.|.||.
T Consensus       288 --d~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  288 --DDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             --ChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence              34567999999999999999999999999985

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=5.1e-31  Score=211.56  Aligned_cols=203  Identities=20%  Similarity=0.265  Sum_probs=134.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~   74 (214)
                      +|+.++.....+...+++..+.  +..  .+|.+.++|+|+||+||++..++.+||+|||+|+....    .....+||+
T Consensus       168 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~  247 (391)
T PHA03212        168 DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTI  247 (391)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCcc
Confidence            4555555555555555543221  222  36667789999999999999999999999999975432    233457999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCC-CCCCCcHHHHHHHHHHhCCCChHHhhccCC-ccccc-c
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAG-DTYTRDEDHLAHIIELLGDIPKRIIQSGHR-SSEFF-T  151 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~-~  151 (214)
                      .|+|||++.+..++.++||||+||+++++++|..+|....+ ........++..+.+..|.+|.++...... ....+ .
T Consensus       248 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~  327 (391)
T PHA03212        248 ATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIG  327 (391)
T ss_pred             CCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHH
Confidence            99999999988999999999999999999999977654321 112234567788888888776543211110 00000 0


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ........+...  ......       ...+.++.+||.+||++||++||||+|+|+||||++
T Consensus       328 ~~~~~~~~~~~~--~~~~~~-------~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        328 LAKKSSRKPGSR--PLWTNL-------YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHhccCCCCCCC--CCHHHH-------hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence            000000000000  000000       123457789999999999999999999999999974

>KOG0665|consensus

Probab=99.97  E-value=9.6e-32  Score=200.10  Aligned_cols=191  Identities=24%  Similarity=0.347  Sum_probs=143.3

Q ss_pred             CchhhhhHHHHHH--hhhc--ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcC
Q psy16751         12 GSLEETDKKRRLY--IRNA--CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINA   85 (214)
Q Consensus        12 ~~~~~~d~k~~~~--~~~~--~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~   85 (214)
                      ..+.|..++..+|  +-.+  +|...++|||+||+||++...+.+||.|||+|+..+..  .+..+.++.|+|||+++|.
T Consensus       113 ~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~  192 (369)
T KOG0665|consen  113 MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGM  192 (369)
T ss_pred             HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheecc
Confidence            3455666655433  2222  56666699999999999999999999999999877543  5667999999999999999


Q ss_pred             CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCC
Q psy16751         86 GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPW  165 (214)
Q Consensus        86 ~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (214)
                      +|...+||||+||++.||++|..+|.+.+      ..+|..++.+.+|.+.+.+..+.......+..     +.+.....
T Consensus       193 ~~ke~vdiwSvGci~gEli~~~Vlf~g~d------~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~-----~~~~y~~~  261 (369)
T KOG0665|consen  193 GYKENVDIWSVGCIMGELILGTVLFPGKD------HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVE-----NRPQYQAI  261 (369)
T ss_pred             CCcccchhhhhhhHHHHHhhceEEecCch------HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhh-----cChHhhcc
Confidence            99999999999999999999999998655      78999999999999999887765554433322     11111111


Q ss_pred             chhhHHHhhc-----CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        166 DLYSVLVEKY-----NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       166 ~~~~~~~~~~-----~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ...+.++...     ..++.....+++++.+||..||++|.+++++|+|||++
T Consensus       262 ~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  262 SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            1111111110     01123345778999999999999999999999999985

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=1e-30  Score=203.46  Aligned_cols=171  Identities=19%  Similarity=0.271  Sum_probs=119.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|+||+||++..++.+||+|||++.....   ......+++.|+|||++.+. .++.++||||+||++++++
T Consensus       119 lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  198 (303)
T cd07869         119 IHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI  198 (303)
T ss_pred             HHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            6677789999999999999999999999999876532   23345789999999999875 5888999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+...     ...++..+....+.+.............+ ...    ......+........     ....+..
T Consensus       199 ~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~-----~~~~~~~  263 (303)
T cd07869         199 QGVAAFPGMKD-----IQDQLERIFLVLGTPNEDTWPGVHSLPHF-KPE----RFTLYSPKNLRQAWN-----KLSYVNH  263 (303)
T ss_pred             hCCCCCCCCcc-----HHHHHHHHHHHhCCCChhhccchhhcccc-ccc----cccccCCccHHHHhh-----ccCCChH
Confidence            99999975331     45666777777676554332221111100 000    000000111111110     0112356


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||++||++|+|++|+|+||||++
T Consensus       264 ~~dli~~mL~~dp~~R~s~~~~l~h~~f~~  293 (303)
T cd07869         264 AEDLASKLLQCFPKNRLSAQAALSHEYFSD  293 (303)
T ss_pred             HHHHHHHHhccCchhccCHHHHhcCccccc
Confidence            789999999999999999999999999974

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0582|consensus

Probab=99.97  E-value=2.4e-31  Score=205.61  Aligned_cols=149  Identities=26%  Similarity=0.329  Sum_probs=113.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---C----CCCCCcCCcccchHHHhcC--CCCcchhhHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---H----FTEDVQTRQYRSLEVLINA--GYDCSADIWSVAC   98 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~----~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~   98 (214)
                      .+|.+.++|||+|+.|||++.+|.|||+|||.+..+-+   .    ....+||++|||||++...  +|+.++||||||+
T Consensus       141 YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGI  220 (516)
T KOG0582|consen  141 YLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGI  220 (516)
T ss_pred             HHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhH
Confidence            46777789999999999999999999999999876621   1    2556999999999997654  7999999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751         99 MAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      +.+|+..|..||....      .+..+-+  .+-|.||... ......                       .      ..
T Consensus       221 TA~ELA~G~aPf~k~p------PmkvLl~--tLqn~pp~~~-t~~~~~-----------------------d------~~  262 (516)
T KOG0582|consen  221 TACELAHGHAPFSKYP------PMKVLLL--TLQNDPPTLL-TSGLDK-----------------------D------ED  262 (516)
T ss_pred             HHHHHhcCCCCcccCC------hHHHHHH--HhcCCCCCcc-cccCCh-----------------------H------Hh
Confidence            9999999999998544      4444433  2334444322 100000                       0      01


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .-.+..++.++..||+.||++||||+++|+|+||++
T Consensus       263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~  298 (516)
T KOG0582|consen  263 KKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK  298 (516)
T ss_pred             hhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence            222347899999999999999999999999999974

>KOG0605|consensus

Probab=99.97  E-value=4.4e-31  Score=208.12  Aligned_cols=142  Identities=18%  Similarity=0.287  Sum_probs=113.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-------------------------C----------------
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------------------------H----------------   66 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------------------------~----------------   66 (214)
                      .+|-++.+|||+||.|+|++..|.+||.|||+|.-...                         .                
T Consensus       256 ~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (550)
T KOG0605|consen  256 SIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQ  335 (550)
T ss_pred             HHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHH
Confidence            36777779999999999999999999999999853310                         0                


Q ss_pred             ---------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy16751         67 ---------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPK  137 (214)
Q Consensus        67 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~  137 (214)
                               ....+|||.|+|||++.+.+|+..+|.||+|||+||++.|.+||.+.+      ..+...++...-..   
T Consensus       336 ~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~t------p~~T~rkI~nwr~~---  406 (550)
T KOG0605|consen  336 TWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSET------PQETYRKIVNWRET---  406 (550)
T ss_pred             HHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhhh---
Confidence                     012389999999999999999999999999999999999999999766      56777777643111   


Q ss_pred             HHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC---HHHHhcCCCCCC
Q psy16751        138 RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT---AADCLQHPWLQN  214 (214)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t---~~e~l~hp~f~~  214 (214)
                           ...+                              .....+.++.|||.+||+ ||.+|..   ++|+.+||||+.
T Consensus       407 -----l~fP------------------------------~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~  450 (550)
T KOG0605|consen  407 -----LKFP------------------------------EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKG  450 (550)
T ss_pred             -----ccCC------------------------------CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcccc
Confidence                 1100                              112334678999999999 9999985   899999999984

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=7.6e-31  Score=209.10  Aligned_cols=175  Identities=22%  Similarity=0.338  Sum_probs=125.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++.....  .....||+.|+|||++.+..++.++||||+||+++++++
T Consensus       141 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~  220 (364)
T cd07875         141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK  220 (364)
T ss_pred             HHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHh
Confidence            366677899999999999999999999999999876543  234578999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHH-----hhcCCChh
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV-----EKYNWTPE  180 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  180 (214)
                      |+.||.+.+      ..+.+..+.+..+.+.+++..........+...     .+............     ........
T Consensus       221 g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (364)
T cd07875         221 GGVLFPGTD------HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN-----RPKYAGYSFEKLFPDVLFPADSEHNKL  289 (364)
T ss_pred             CCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhh-----CCCcCCCChHhhCcccccccccccccc
Confidence            999997654      567778888888887766544332211111000     00000000000000     00001122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ....+++||.+||+.||++|||+.|+|+||||+
T Consensus       290 ~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~  322 (364)
T cd07875         290 KASQARDLLSKMLVIDASKRISVDEALQHPYIN  322 (364)
T ss_pred             ccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence            345678999999999999999999999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0597|consensus

Probab=99.97  E-value=4.1e-31  Score=209.81  Aligned_cols=163  Identities=23%  Similarity=0.350  Sum_probs=132.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--h--hhcccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--I--RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~--~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~   75 (214)
                      ||+.++-..+++.+..+...-+  +  -..+|.+.+.|+|+||+||++..++.+|++|||+|+.++..   .+..-|||.
T Consensus        86 ~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPl  165 (808)
T KOG0597|consen   86 DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPL  165 (808)
T ss_pred             hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCccc
Confidence            6888888888888887765332  1  12477788899999999999999999999999999988653   445579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |||||+..+.+|+..+|+||+||++||++.|++||....       .-++.+++  +-.                     
T Consensus       166 YmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-------i~~Lv~~I--~~d---------------------  215 (808)
T KOG0597|consen  166 YMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-------ITQLVKSI--LKD---------------------  215 (808)
T ss_pred             ccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-------HHHHHHHH--hcC---------------------
Confidence            999999999999999999999999999999999997322       22222221  111                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                        +..++.+.+..++.|++.+|+.||.+|+|+.+++.|||++
T Consensus       216 ------------------~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k  255 (808)
T KOG0597|consen  216 ------------------PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWK  255 (808)
T ss_pred             ------------------CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHh
Confidence                              1124456778899999999999999999999999999976

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=1.5e-30  Score=200.82  Aligned_cols=168  Identities=24%  Similarity=0.406  Sum_probs=122.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++|+||+++.++.+||+|||++......    .....|++.|+|||++.+..++.++|+||+||++++++
T Consensus       116 lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~  195 (287)
T cd07848         116 CHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELS  195 (287)
T ss_pred             HHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHH
Confidence            56677799999999999999999999999999876432    23347899999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.+||.+.+      ..+.+..+.+..+..+............+...     ..+......   ....  ......+.+
T Consensus       196 ~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~--~~~~~~s~~  259 (287)
T cd07848         196 DGQPLFPGES------EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL-----RFPAVNHPQ---SLER--RYLGILSGV  259 (287)
T ss_pred             hCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHhhhccchhccc-----ccCcccCcc---cHHH--hhhcccCHH
Confidence            9999998644      46667777777777766544321111111000     000000000   0000  012335567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+||.+||++||++|||++|+|+||||
T Consensus       260 ~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         260 LLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            8999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=1.1e-30  Score=207.41  Aligned_cols=177  Identities=24%  Similarity=0.355  Sum_probs=125.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.+.++|+|+||+||++..++.+||+|||+++.....  .....||+.|+|||++.+..++.++||||+||+++++++
T Consensus       134 ~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  213 (355)
T cd07874         134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR  213 (355)
T ss_pred             HHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence            367778899999999999999999999999999876543  334578999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc-ccccccCccc--cCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKKGELR--HIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      |..||.+.+      ..+....+.+.++.+..+......... .+........  ..+...+....   ..........+
T Consensus       214 g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  284 (355)
T cd07874         214 HKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF---PADSEHNKLKA  284 (355)
T ss_pred             CCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccc---ccccccccccc
Confidence            999997544      566777777777777665543322111 1111000000  00000000000   00001122234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.+||.+||+.||++|||+.|+|+||||+
T Consensus       285 ~~~~~li~~mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         285 SQARDLLSKMLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             hHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence            5778999999999999999999999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0591|consensus

Probab=99.97  E-value=9.2e-31  Score=192.15  Aligned_cols=153  Identities=18%  Similarity=0.250  Sum_probs=117.5

Q ss_pred             hhhhhccCchhhhhHHHHHHhhh---cccccc------cccccccccccccCCCcceEEeecCCceeccCC---CCCCCc
Q psy16751          5 FNFFVAFGSLEETDKKRRLYIRN---ACWVDK------HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQ   72 (214)
Q Consensus         5 ~~~~~~~~~~~~~d~k~~~~~~~---~~~~~~------~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~   72 (214)
                      +..+.+..+++......++|.+-   +-|.|+      ++|||+||.||.++.+|.||++|||+++.+.+.   ..+.+|
T Consensus       111 Ik~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VG  190 (375)
T KOG0591|consen  111 IKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVG  190 (375)
T ss_pred             HHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcC
Confidence            44555666666666667666443   223333      689999999999999999999999999988653   456799


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      ||+||+||++.+.+|+.++||||+||+++||+.-++||.+.+       ...+.+.+.....+|-               
T Consensus       191 TPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-------~~~L~~KI~qgd~~~~---------------  248 (375)
T KOG0591|consen  191 TPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-------LLSLCKKIEQGDYPPL---------------  248 (375)
T ss_pred             CCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-------HHHHHHHHHcCCCCCC---------------
Confidence            999999999999999999999999999999999999998643       4555444433222111               


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA  203 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~  203 (214)
                                              .+...+.++..++..|+..||++||+.
T Consensus       249 ------------------------p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  249 ------------------------PDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             ------------------------cHHHhhhHHHHHHHHHccCCcccCCCc
Confidence                                    113456678899999999999999984

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=1.5e-30  Score=201.17  Aligned_cols=162  Identities=20%  Similarity=0.309  Sum_probs=122.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|+||+||+++.++.+||+|||+++.....  .....|++.|+|||.+.+..++.++||||+||+++++++|
T Consensus       126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  205 (290)
T cd07862         126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR  205 (290)
T ss_pred             HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC
Confidence            66777899999999999999999999999999866432  3345789999999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc-cccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS-SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      .+||.+.+      ..+.+..+....+.+........... ...+.         .........       ..+..+..+
T Consensus       206 ~~~f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-------~~~~~~~~~  263 (290)
T cd07862         206 KPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFH---------SKSAQPIEK-------FVTDIDELG  263 (290)
T ss_pred             CCCcCCCC------HHHHHHHHHHHhCCCChhhchhhhcccchhcc---------CCCCCCHHH-------HccCCCHHH
Confidence            99998654      56778888877776654433221111 00000         000001100       112345677


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+|+.+||+.||++|||+.|+|+||||
T Consensus       264 ~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         264 KDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=1.2e-30  Score=212.34  Aligned_cols=166  Identities=20%  Similarity=0.387  Sum_probs=124.1

Q ss_pred             ccccccccccccccccccCCC-cceEEeecCCceeccC--CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|||+||+||+++.+ +.+||+|||+|+....  .....+||+.|+|||++.+. .|+.++||||+||++++|+
T Consensus       186 LH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell  265 (440)
T PTZ00036        186 IHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI  265 (440)
T ss_pred             HHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence            667778999999999999865 4799999999986642  33445889999999999875 6999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.+||.+.+      ..+++..+.+.+|.++.+.......  .+..     ...+......+..      ..+...+.+
T Consensus       266 tG~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~--~~~~-----~~~~~~~~~~l~~------~~p~~~~~~  326 (440)
T PTZ00036        266 LGYPIFSGQS------SVDQLVRIIQVLGTPTEDQLKEMNP--NYAD-----IKFPDVKPKDLKK------VFPKGTPDD  326 (440)
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhch--hhhc-----ccCCccCchhHHH------HhccCCCHH
Confidence            9999998655      5788888888888877654432110  0000     0001111111111      123344567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +++||.+||++||.+|+|+.|+|+||||+
T Consensus       327 ~~~li~~~L~~dP~~R~ta~e~l~hp~f~  355 (440)
T PTZ00036        327 AINFISQFLKYEPLKRLNPIEALADPFFD  355 (440)
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence            89999999999999999999999999996

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=4e-30  Score=201.23  Aligned_cols=181  Identities=20%  Similarity=0.257  Sum_probs=120.9

Q ss_pred             ccccccccccccccccccc----CCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRS----LPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSV   96 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~----~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~   96 (214)
                      .+|.++++|+|+||+||++    ..++.+||+|||+|+.....      ....+||+.|+|||++.+. .++.++||||+
T Consensus       123 ~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl  202 (317)
T cd07868         123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI  202 (317)
T ss_pred             HHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHH
Confidence            3677778999999999998    45679999999999876432      2345789999999999885 58999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         97 ACMAFELATGDYLFEPHAGDT---YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        97 G~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||+++++++|.+||.......   ......++..+...+|.+.......................... ...........
T Consensus       203 G~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  281 (317)
T cd07868         203 GCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY-TNCSLIKYMEK  281 (317)
T ss_pred             HHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcccc-CcccccchHHh
Confidence            999999999999997543221   11224677788888887766544332221111000000000000 00000000000


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .   ....+..+.+||.+||++||.+|+|++|+|+||||
T Consensus       282 ~---~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         282 H---KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             c---CCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            0   01123457899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=2.7e-30  Score=203.82  Aligned_cols=168  Identities=25%  Similarity=0.378  Sum_probs=123.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhc--CCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLIN--AGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+++.....      ....+|++.|+|||++.+  ..++.++||||+||+
T Consensus       118 ~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvv  197 (338)
T cd07859         118 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI  197 (338)
T ss_pred             HHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHH
Confidence            367777899999999999999999999999999754221      234579999999999976  468999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc--ccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS--EFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      ++++++|++||.+.+      ...++..+....|.++...........  .+..      ......+.....    .   
T Consensus       198 l~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~----~---  258 (338)
T cd07859         198 FAEVLTGKPLFPGKN------VVHQLDLITDLLGTPSPETISRVRNEKARRYLS------SMRKKQPVPFSQ----K---  258 (338)
T ss_pred             HHHHHcCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH------hhcccCCCchHH----h---
Confidence            999999999997644      466777777888887776554332211  0100      000000111000    0   


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+..+.+++.+||+.||++|||++|+|+||||++
T Consensus       259 ~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         259 FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             cCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence            1123456789999999999999999999999999964

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=1.3e-30  Score=207.34  Aligned_cols=177  Identities=23%  Similarity=0.370  Sum_probs=125.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.+.++|+|+||+||+++.++.+||+|||+++.....  .....||+.|+|||++.+..++.++||||+||+++++++
T Consensus       138 ~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~t  217 (359)
T cd07876         138 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK  217 (359)
T ss_pred             HHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHh
Confidence            367777899999999999999999999999999765332  344578999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc-ccccccCccccCCCCCCCchhhHH--HhhcCCChhhH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKKGELRHIPGLKPWDLYSVL--VEKYNWTPESA  182 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  182 (214)
                      |..||.+.+      ...++..+.+.++.++..+........ .+......   .+...........  ..........+
T Consensus       218 g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (359)
T cd07876         218 GSVIFQGTD------HIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQ---YPGISFEELFPDWIFPSESERDKLKT  288 (359)
T ss_pred             CCCCCCCCC------HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCC---CCCcchhhhccccccccccccccccc
Confidence            999998654      567777788888887766543321111 11100000   0000000000000  00000112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.+||.+||++||++|||++|+|+||||+
T Consensus       289 ~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  319 (359)
T cd07876         289 SQARDLLSKMLVIDPDKRISVDEALRHPYIT  319 (359)
T ss_pred             hhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence            5678999999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4717|consensus

Probab=99.97  E-value=1.5e-30  Score=204.97  Aligned_cols=163  Identities=21%  Similarity=0.403  Sum_probs=138.0

Q ss_pred             cchhhhhccCchhhhhHHHHHHh---hhc--cccccccccccccccccc-CCCcceEEeecCCceec--cCCCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYI---RNA--CWVDKHFTEDVQTRQYRS-LPPFLFDIGTYRNACWV--DKHFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~---~~~--~~~~~~~h~d~k~~nil~-~~~~~~kl~Dfg~a~~~--~~~~~~~~~~~   74 (214)
                      |||+|+++...-+..|+-.+.|.   +.|  ||.--++|||+||+|+.. ..-|.||+.|||.+..+  ++.....+|++
T Consensus       103 Dl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSL  182 (864)
T KOG4717|consen  103 DLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSL  182 (864)
T ss_pred             hHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchh
Confidence            79999999999888888666663   333  444445899999999886 55799999999999877  45677889999


Q ss_pred             cccchHHHhcCCCC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         75 QYRSLEVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        75 ~y~aPE~~~~~~~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      .|.|||+++|..|+ +++||||+|||+|-+.+|++||...+      +-+.+-+|..+                      
T Consensus       183 AYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN------DSETLTmImDC----------------------  234 (864)
T KOG4717|consen  183 AYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN------DSETLTMIMDC----------------------  234 (864)
T ss_pred             hccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc------chhhhhhhhcc----------------------
Confidence            99999999999998 58999999999999999999998766      56667666544                      


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                          ++-.|...+.+++|||..||+.||.+|.|.+++..++|++
T Consensus       235 --------------------KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq  274 (864)
T KOG4717|consen  235 --------------------KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ  274 (864)
T ss_pred             --------------------cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence                                2335677788999999999999999999999999999986

>KOG0198|consensus

Probab=99.96  E-value=7.5e-31  Score=200.68  Aligned_cols=167  Identities=22%  Similarity=0.292  Sum_probs=120.5

Q ss_pred             cchhhhhccC-chhhhhHHHH--HHhhhc--ccccccccccccccccccCC-CcceEEeecCCceeccC------CCCCC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRR--LYIRNA--CWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDK------HFTED   70 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~--~~~~~~--~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~------~~~~~   70 (214)
                      +|-+++...+ ++.+.+++..  ..++.+  +|.+.++|+|+|+.|||++. ++.+||+|||++.....      .....
T Consensus       102 sL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~  181 (313)
T KOG0198|consen  102 SLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSV  181 (313)
T ss_pred             cHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccc
Confidence            3445555555 4666666542  224444  55667899999999999999 79999999999987763      12346


Q ss_pred             CcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccc
Q psy16751         71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEF  149 (214)
Q Consensus        71 ~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  149 (214)
                      .||+.|||||++... .-++++||||+||++.||++|.+||....     .....+..+... +..|             
T Consensus       182 ~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-----~~~~~~~~ig~~-~~~P-------------  242 (313)
T KOG0198|consen  182 QGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-----EEAEALLLIGRE-DSLP-------------  242 (313)
T ss_pred             cCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-----chHHHHHHHhcc-CCCC-------------
Confidence            899999999999963 23359999999999999999999986310     011222222110 0000             


Q ss_pred             ccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        150 FTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                                ..+...+.++.+||.+|++.||++||||+++|+|||.++
T Consensus       243 --------------------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  243 --------------------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             --------------------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence                                      134556778899999999999999999999999999853

>KOG0694|consensus

Probab=99.96  E-value=1.9e-30  Score=209.74  Aligned_cols=139  Identities=16%  Similarity=0.238  Sum_probs=120.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+++++||+|-.|||++..|.+||+|||+++..   +...++.+|||.|+|||++.+..|+.++|.||+||++|||+
T Consensus       483 fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML  562 (694)
T KOG0694|consen  483 FLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEML  562 (694)
T ss_pred             HHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHH
Confidence            488899999999999999999999999999999854   45667789999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      .|++||.+++      +.+....|..-                                          ...+|..++.+
T Consensus       563 ~Gq~PF~gdd------Eee~FdsI~~d------------------------------------------~~~yP~~ls~e  594 (694)
T KOG0694|consen  563 VGESPFPGDD------EEEVFDSIVND------------------------------------------EVRYPRFLSKE  594 (694)
T ss_pred             cCCCCCCCCC------HHHHHHHHhcC------------------------------------------CCCCCCcccHH
Confidence            9999999777      66666555421                                          12245667778


Q ss_pred             HHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      +.++|+++|+.||++|+.     ++++.+||||++
T Consensus       595 a~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  595 AIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             HHHHHHHHhccCcccccCCCCCCchhhhhCCcccc
Confidence            899999999999999986     578999999985

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.1e-30  Score=198.05  Aligned_cols=164  Identities=13%  Similarity=0.172  Sum_probs=123.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|++++.....+....+...++  +.  +.+|.++++|+|++|+||+++.++.+||+|||++..........+|++.|+|
T Consensus        87 ~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~a  166 (291)
T cd05612          87 ELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLA  166 (291)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcC
Confidence            4566666665555555433211  22  2367777899999999999999999999999999877655555689999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+..++.++||||+||+++++++|..||.+.+      ..+....+...  .                        
T Consensus       167 PE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~i~~~--~------------------------  214 (291)
T cd05612         167 PEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN------PFGIYEKILAG--K------------------------  214 (291)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhC--C------------------------
Confidence            999998889999999999999999999999997533      22222222210  0                        


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                      ...+...+..+.+|+.+||+.||.+|++     ++++++||||+.
T Consensus       215 ----------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         215 ----------------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             ----------------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence                            0012333556789999999999999995     999999999963

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0670|consensus

Probab=99.96  E-value=5.1e-31  Score=207.44  Aligned_cols=175  Identities=25%  Similarity=0.475  Sum_probs=140.2

Q ss_pred             cccccccccccccCC-CcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCC
Q psy16751         34 HFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE  111 (214)
Q Consensus        34 ~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~  111 (214)
                      ++|.||||.|||+.+ ...+||||||.|....+. .+.+.-+..|+|||+++|.+|+++.|+||+||+|||+++|+.+|.
T Consensus       557 vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp  636 (752)
T KOG0670|consen  557 VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP  636 (752)
T ss_pred             eeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence            379999999999977 468899999999887653 455567789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc--------------CCCCCC-CchhhHHHhhcC
Q psy16751        112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH--------------IPGLKP-WDLYSVLVEKYN  176 (214)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~  176 (214)
                      +.+      +.+.+..+..+=|.+|..++-++.-...-|++...+.+              +....+ ..+...+...-.
T Consensus       637 G~T------NN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~  710 (752)
T KOG0670|consen  637 GRT------NNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQR  710 (752)
T ss_pred             CCC------cHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCC
Confidence            876      67888888899999999999888887777766555432              223334 223333333222


Q ss_pred             CCh---hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        177 WTP---ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       177 ~~~---~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.   ....++++||.+||..||++|.|..+||+||||..
T Consensus       711 ~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  711 LPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            233   33568899999999999999999999999999963

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=9.2e-30  Score=203.43  Aligned_cols=194  Identities=26%  Similarity=0.415  Sum_probs=134.5

Q ss_pred             chhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCc
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQ   75 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~   75 (214)
                      |.+++.....+....++..++  +..  .+|...++|+|+||+||+++.++.+||+|||+++.....    ....++++.
T Consensus        90 l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~  169 (372)
T cd07853          90 LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQY  169 (372)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCC
Confidence            344444444455444433221  222  366677799999999999999999999999999865322    233478899


Q ss_pred             ccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc-cccccc
Q psy16751         76 YRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKK  153 (214)
Q Consensus        76 y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~  153 (214)
                      |+|||++.+. .++.++||||+||++++|++|..||.+.+      ...++..+.+.+|.++........... ..... 
T Consensus       170 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-  242 (372)
T cd07853         170 YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS------PIQQLDLITDLLGTPSLEAMRSACEGARAHILR-  242 (372)
T ss_pred             cCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHh-
Confidence            9999999885 48899999999999999999999998654      578888888888887765443221110 00000 


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                           .+...+ ..    ..........+.++.+||.+||++||++|||++|+|+||||++
T Consensus       243 -----~~~~~~-~~----~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         243 -----GPHKPP-SL----PVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             -----CCCCCC-ch----HHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence                 000000 00    0011122344667889999999999999999999999999973

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=1.1e-29  Score=196.17  Aligned_cols=162  Identities=25%  Similarity=0.347  Sum_probs=120.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|++|.||+++.++.+||+|||+++.....  .....|+..|+|||++.+..++.++||||+||+++++++|
T Consensus       124 lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g  203 (288)
T cd07863         124 LHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR  203 (288)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC
Confidence            56667799999999999999999999999999876432  3345788999999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc-cccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS-SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      .++|.+.+      ..+.+.++....+.+........... ...+         ..........       ..+..+..+
T Consensus       204 ~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-------~~~~~~~~~  261 (288)
T cd07863         204 KPLFCGNS------EADQLGKIFDLIGLPPEDDWPRDVTLPRGAF---------SPRGPRPVQS-------VVPEIEESG  261 (288)
T ss_pred             CcCcCCCC------HHHHHHHHHHHhCCCChhhCccccccccccc---------CCCCCCchHH-------hCcCcCHHH
Confidence            99997544      56777777777776554332211110 0000         0000001000       112345567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+|+.+||++||++|||+.|+++||||
T Consensus       262 ~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         262 AQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.9e-29  Score=199.59  Aligned_cols=169  Identities=24%  Similarity=0.364  Sum_probs=124.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|.+.++|+|++|.||+++.++.+||+|||+++.........+||+.|+|||++.+. .++.++||||+||+++++++|.
T Consensus       134 LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  213 (343)
T cd07878         134 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK  213 (343)
T ss_pred             HHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC
Confidence            666777999999999999999999999999998877666667899999999999874 6889999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||.+.+      ..+.+..+.+..+.++.............    ......+..........       ....++.+.+
T Consensus       214 ~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  276 (343)
T cd07878         214 ALFPGND------YIDQLKRIMEVVGTPSPEVLKKISSEHAR----KYIQSLPHMPQQDLKKI-------FRGANPLAID  276 (343)
T ss_pred             CCCCCCC------HHHHHHHHHHHhCCCCHHHHHhcchhhHH----HHhhccccccchhHHHh-------ccCCCHHHHH
Confidence            9997544      46677777777777766554322111000    00000011110000000       0123346789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      |+.+||++||.+|||+.|+|+||||.+
T Consensus       277 li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         277 LLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhcCcchhc
Confidence            999999999999999999999999963

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=1.7e-29  Score=197.07  Aligned_cols=168  Identities=26%  Similarity=0.424  Sum_probs=124.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|++|+||+++.++.+||+|||+++.....   .....+++.|+|||.+.+. .++.++||||+||++++++
T Consensus       120 lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~  199 (309)
T cd07872         120 CHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMA  199 (309)
T ss_pred             HHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            66777799999999999999999999999999765322   2345788999999999865 5889999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.+||.+.+      ..+.+..+.+.+|.++............+....     .+.........       .....+.+
T Consensus       200 tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~~  261 (309)
T cd07872         200 SGRPLFPGST------VEDELHLIFRLLGTPTEETWPGISSNDEFKNYN-----FPKYKPQPLIN-------HAPRLDTE  261 (309)
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh-----cCccCCCchhh-------hccCCCHH
Confidence            9999997654      456777788888887776544332221111100     01111111110       11234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||++||.+|+|++|+|+||||+.
T Consensus       262 ~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         262 GIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             HHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            789999999999999999999999999973

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.96  E-value=8.1e-30  Score=200.59  Aligned_cols=164  Identities=15%  Similarity=0.177  Sum_probs=122.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.....+....++....  +.  ..+|.++++|+|+||+||+++.++.+||+|||+++..........|++.|+|
T Consensus       104 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~a  183 (329)
T PTZ00263        104 ELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLA  183 (329)
T ss_pred             hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcC
Confidence            4566666655555444432111  12  2367777899999999999999999999999999887666556689999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+..++.++||||+||+++++++|..||.+.+      .......+..  +.+                       
T Consensus       184 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~--~~~-----------------------  232 (329)
T PTZ00263        184 PEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT------PFRIYEKILA--GRL-----------------------  232 (329)
T ss_pred             HHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC------HHHHHHHHhc--CCc-----------------------
Confidence            999999889999999999999999999999997433      2222222211  000                       


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                       ..+...+..+.+|+.+||+.||++|++     +++++.||||++
T Consensus       233 -----------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        233 -----------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             -----------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence                             011223456789999999999999997     799999999974

>KOG0201|consensus

Probab=99.96  E-value=1.1e-30  Score=201.61  Aligned_cols=141  Identities=23%  Similarity=0.310  Sum_probs=112.7

Q ss_pred             hhcccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         26 RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        26 ~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      -..+|.+..+|||+|..||++..+|.+|++|||.+......   ..+.+||+.|||||++.+.+|+.++||||+|++.+|
T Consensus       124 l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiE  203 (467)
T KOG0201|consen  124 LDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIE  203 (467)
T ss_pred             hhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHH
Confidence            45678888899999999999999999999999999877542   356799999999999998899999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      |++|.+|+....      .+..+..|                               ++..+..          .....+
T Consensus       204 la~GePP~s~~h------PmrvlflI-------------------------------pk~~PP~----------L~~~~S  236 (467)
T KOG0201|consen  204 LAKGEPPHSKLH------PMRVLFLI-------------------------------PKSAPPR----------LDGDFS  236 (467)
T ss_pred             HhcCCCCCcccC------cceEEEec-------------------------------cCCCCCc----------cccccC
Confidence            999999996422      11111111                               0000100          123456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+++|+..||+.||+.||||+++|+|+|.+
T Consensus       237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk  267 (467)
T KOG0201|consen  237 PPFKEFVEACLDKNPEFRPSAKELLKHKFIK  267 (467)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhhHHHH
Confidence            6789999999999999999999999999976

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=3e-29  Score=201.67  Aligned_cols=174  Identities=21%  Similarity=0.259  Sum_probs=122.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+|+.||++..++.++|+|||+++.....     ....+||+.|+|||++.+..|+.++||||+||+++++
T Consensus       201 LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el  280 (392)
T PHA03207        201 LHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM  280 (392)
T ss_pred             HHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence            66777799999999999999999999999999766432     2245799999999999988999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc-cccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS-SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++|..||.+....   ....++..+.+.++..+.++....... ...+.. ......+...   ... ...    ....+
T Consensus       281 ~~g~~pf~~~~~~---~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~-~~~----~~~~~  348 (392)
T PHA03207        281 SVKNVTLFGKQVK---SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ-YAIVLRPPYT---IPP-VIR----KYGMH  348 (392)
T ss_pred             HHCCCCCCCCCCC---CcHHHHHHHHHHhccCccccCCccchhHHHHHHh-hcccccCCcc---ccc-hhh----ccCcc
Confidence            9999999864432   256778888887776554332111000 000000 0000000000   000 000    11234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .++.+||.+||++||.+|||+.|+|+||||+.
T Consensus       349 ~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        349 MDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             hhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence            56789999999999999999999999999973

>KOG0032|consensus

Probab=99.96  E-value=1.8e-29  Score=199.73  Aligned_cols=167  Identities=22%  Similarity=0.328  Sum_probs=128.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCC----cceEEeecCCceeccC--CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPP----FLFDIGTYRNACWVDK--HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~----~~~kl~Dfg~a~~~~~--~~~~~~~   72 (214)
                      +||+.+++. ++.++|....+.  ++  ..+|...++|||+||+|++....    +.+|++|||+|.....  .....+|
T Consensus       122 eLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~G  200 (382)
T KOG0032|consen  122 ELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVG  200 (382)
T ss_pred             hHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecC
Confidence            577888877 477777654322  22  23777788999999999997553    4799999999998865  4567799


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+.+|+..+||||+||+++.|++|.+||.+.+      +......+.+  |.+        .-       
T Consensus       201 tp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~------~~~~~~~i~~--~~~--------~f-------  257 (382)
T KOG0032|consen  201 TPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET------EFEIFLAILR--GDF--------DF-------  257 (382)
T ss_pred             CccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC------hhHHHHHHHc--CCC--------CC-------
Confidence            999999999999999999999999999999999999998655      3333333322  111        00       


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                           .....+..+..+.+|+++||..||.+|+||.++|+|||+++
T Consensus       258 ---------------------~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  258 ---------------------TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             ---------------------CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence                                 00122455678899999999999999999999999999863

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.96  E-value=1.3e-29  Score=198.99  Aligned_cols=164  Identities=15%  Similarity=0.173  Sum_probs=119.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++....  +.  ..+|.++++|+|+||+||+++.++.+||+|||+++...   ......+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence            4555555554444444433211  22  23677778999999999999999999999999987542   22334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      .......+..  +.                     
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~~~~--~~---------------------  211 (323)
T cd05571         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILM--EE---------------------  211 (323)
T ss_pred             ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC------HHHHHHHHHc--CC---------------------
Confidence            999999999899999999999999999999999997433      1121111110  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+||.+||+.||++|+     ++.++++||||++
T Consensus       212 -------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         212 -------------------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence                               011233456778999999999999999     8999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0604|consensus

Probab=99.96  E-value=1.8e-29  Score=186.76  Aligned_cols=146  Identities=18%  Similarity=0.246  Sum_probs=113.7

Q ss_pred             ccccccccccccccccccCC---CcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..++.|||+||+|+|...   +..+||+|||.|+...+  ...+.+.||+|.|||++-...|+..+|+||+||++|-|
T Consensus       177 lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIl  256 (400)
T KOG0604|consen  177 LHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL  256 (400)
T ss_pred             HHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHh
Confidence            77778899999999999754   67999999999998763  45677899999999999888899999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|++||++..+  +...-..-.+|..-.-.+|.+                                      -.+..+.
T Consensus       257 LCGyPPFYS~hg--~aispgMk~rI~~gqy~FP~p--------------------------------------EWs~VSe  296 (400)
T KOG0604|consen  257 LCGYPPFYSNHG--LAISPGMKRRIRTGQYEFPEP--------------------------------------EWSCVSE  296 (400)
T ss_pred             hcCCCcccccCC--ccCChhHHhHhhccCccCCCh--------------------------------------hHhHHHH
Confidence            999999986433  222222222222111111111                                      1245677


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+|+|+++|..+|++|.|+.+++.|||..+
T Consensus       297 ~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~  327 (400)
T KOG0604|consen  297 AAKDLIRKLLKTEPTERLTIEEVMDHPWINQ  327 (400)
T ss_pred             HHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence            8899999999999999999999999999853

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=4.2e-29  Score=195.40  Aligned_cols=180  Identities=21%  Similarity=0.278  Sum_probs=120.0

Q ss_pred             cccccccccccccccccc----CCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRS----LPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVA   97 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~----~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G   97 (214)
                      +|...++|+|+||+||++    ..++.+||+|||+++.....      .....||+.|+|||++.+. .++.++||||+|
T Consensus       124 lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  203 (317)
T cd07867         124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             HHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHH
Confidence            566677999999999998    45689999999999876432      2234788999999999875 488999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         98 CMAFELATGDYLFEPHAGDT---YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+++++++|.+||.......   ......++..+...+|.+.............+........... ..........   
T Consensus       204 ~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---  279 (317)
T cd07867         204 CIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTT-YANSSLIKYM---  279 (317)
T ss_pred             HHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccc-cCCchhhhhh---
Confidence            99999999999997543211   1123456677777777766554433322221111110000000 0000000000   


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .......+..+.+|+.+||+.||.+|||++|+|+||||
T Consensus       280 ~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         280 EKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            00112234567899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.96  E-value=2.1e-29  Score=198.91  Aligned_cols=164  Identities=17%  Similarity=0.177  Sum_probs=121.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.....+....+.....  +.  ..+|...++|+|+||+||+++.++.+||+|||++...........||+.|+|
T Consensus       117 ~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~a  196 (340)
T PTZ00426        117 EFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIA  196 (340)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcC
Confidence            4555655555544433322111  11  2366777799999999999999999999999999877665556689999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+..++.++|+||+||++++|++|..||...+      .......+.+.  .                        
T Consensus       197 PE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~~--~------------------------  244 (340)
T PTZ00426        197 PEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE------PLLIYQKILEG--I------------------------  244 (340)
T ss_pred             HHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC------HHHHHHHHhcC--C------------------------
Confidence            999998889999999999999999999999997533      22222222210  0                        


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                      ...+...+..+.+++++||+.||++|+     |++++++||||++
T Consensus       245 ----------------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        245 ----------------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             ----------------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence                            001223345678999999999999995     8999999999974

>KOG0983|consensus

Probab=99.96  E-value=3.5e-29  Score=183.39  Aligned_cols=152  Identities=20%  Similarity=0.271  Sum_probs=118.5

Q ss_pred             hhhhHHHHHHhhhcccccccccccccccccccCCCcceEEeecCCceecc-CC-CCCCCcCCcccchHHHhcC---CCCc
Q psy16751         15 EETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD-KH-FTEDVQTRQYRSLEVLINA---GYDC   89 (214)
Q Consensus        15 ~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~-~~-~~~~~~~~~y~aPE~~~~~---~~~~   89 (214)
                      +-.-+|...|+.   --|.++|||+||+|||++..|.+|++|||++..+. +. .+...|.+.|||||.+--.   .|+-
T Consensus       197 tva~v~AL~YLK---eKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDi  273 (391)
T KOG0983|consen  197 TVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDI  273 (391)
T ss_pred             HHHHHHHHHHHH---HhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccch
Confidence            333344444443   44667999999999999999999999999998764 33 4556899999999999754   5889


Q ss_pred             chhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhh
Q psy16751         90 SADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS  169 (214)
Q Consensus        90 ~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (214)
                      .+||||+|++++|+.+|+.||.+++.     +.+.+.+++..  .||. + .                            
T Consensus       274 RaDVWSlGITlveLaTg~yPy~~c~t-----dFe~ltkvln~--ePP~-L-~----------------------------  316 (391)
T KOG0983|consen  274 RADVWSLGITLVELATGQYPYKGCKT-----DFEVLTKVLNE--EPPL-L-P----------------------------  316 (391)
T ss_pred             hhhhhhhccchhhhhcccCCCCCCCc-----cHHHHHHHHhc--CCCC-C-C----------------------------
Confidence            99999999999999999999987663     66767666542  2211 0 0                            


Q ss_pred             HHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                             .....++++.+|+..||+.|+.+||.-.++|+|||++
T Consensus       317 -------~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~  353 (391)
T KOG0983|consen  317 -------GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK  353 (391)
T ss_pred             -------cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence                   0122567889999999999999999999999999975

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.5e-29  Score=195.00  Aligned_cols=164  Identities=16%  Similarity=0.222  Sum_probs=119.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|++++.....+....++..+.  +.  ..+|...++|+|++|.||+++.++.++|+|||+++....   .....+||+.
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  158 (312)
T cd05585          79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPE  158 (312)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcc
Confidence            4566666655554444433211  22  236777789999999999999999999999999875422   2334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      ..+....+..   .                     
T Consensus       159 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~~~~~~---~---------------------  208 (312)
T cd05585         159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMYRKILQ---E---------------------  208 (312)
T ss_pred             cCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC------HHHHHHHHHc---C---------------------
Confidence            999999999899999999999999999999999997432      1222222111   0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC---CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA---TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---t~~e~l~hp~f~~  214 (214)
                                        ....+...+..+.+|+.+||+.||++|+   ++.++|+||||++
T Consensus       209 ------------------~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~  252 (312)
T cd05585         209 ------------------PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ  252 (312)
T ss_pred             ------------------CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence                              0012233456778999999999999997   5899999999974

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.5e-28  Score=198.80  Aligned_cols=177  Identities=19%  Similarity=0.195  Sum_probs=113.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+|++||++..++.++|+|||+++.....     .....||+.|+|||++.+..++.++||||+||+++|+
T Consensus       276 LH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El  355 (461)
T PHA03211        276 IHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEA  355 (461)
T ss_pred             HHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence            56677799999999999999999999999999865322     1234689999999999998999999999999999999


Q ss_pred             hhCCCCCCCCC-CCCCCCcHHHHHHHHHHhCCCChHHhhcc--CCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        104 ATGDYLFEPHA-GDTYTRDEDHLAHIIELLGDIPKRIIQSG--HRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       104 ~~g~~~f~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++|..++.... .........++.++++..+.....+....  .....+.... .....+......+..        ...
T Consensus       356 ~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~--------~~~  426 (461)
T PHA03211        356 AVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA-ARNRRPAYTRPAWTR--------YYK  426 (461)
T ss_pred             HHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh-hcccCCccCCcchhh--------hcc
Confidence            99875543322 11112234556565554433211110000  0000000000 000000000000000        012


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+.+||.+||++||++|||+.|+|+||||++
T Consensus       427 ~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        427 LDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             ccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            2346789999999999999999999999999985

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=1.2e-28  Score=193.23  Aligned_cols=164  Identities=14%  Similarity=0.200  Sum_probs=118.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+.+..+...+.  +..  .+|.+.++|+|+||.||+++.++.+||+|||++....   .......||+.
T Consensus        82 ~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  161 (320)
T cd05590          82 DLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPD  161 (320)
T ss_pred             hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCcc
Confidence            3444444444444444432111  222  3667777999999999999999999999999987542   22334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||...+      ....+..+...  .+                    
T Consensus       162 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~--~~--------------------  213 (320)
T cd05590         162 YIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILND--EV--------------------  213 (320)
T ss_pred             ccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhcC--CC--------------------
Confidence            999999998889999999999999999999999997543      22222222210  00                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH------HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA------ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~------~e~l~hp~f~~  214 (214)
                                          ..+...+.++.+|+.+||+.||++|+++      +++++||||++
T Consensus       214 --------------------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         214 --------------------VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             --------------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence                                0112234567899999999999999998      99999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=7.1e-29  Score=197.27  Aligned_cols=177  Identities=21%  Similarity=0.260  Sum_probs=113.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|..+++|+|+|+.||++...+.+||+|||+++....  ......||+.|+|||++.+..++.++||||+||+++++++
T Consensus       172 ~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~  251 (357)
T PHA03209        172 YLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA  251 (357)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHH
Confidence            36667779999999999999999999999999975432  2334578999999999999899999999999999999998


Q ss_pred             CC-CCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHhhccC-C-ccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        106 GD-YLFEPHAGDT---YTRDEDHLAHIIELLGDIPKRIIQSGH-R-SSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       106 g~-~~f~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +. ++|.......   ......++..+...++..+..+..... . ...+......     ...+....... .    ..
T Consensus       252 ~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~----~~  321 (357)
T PHA03209        252 YPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL-----ERQPYTRYPCF-Q----RV  321 (357)
T ss_pred             cCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc-----CCCcccccHHH-h----cc
Confidence            54 4444322110   011133444555555554433221000 0 0000000000     00000000000 0    11


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+.++.+||.+||++||++||||.|+|+||||++
T Consensus       322 ~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        322 NLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            23445678999999999999999999999999985

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.96  E-value=7.3e-29  Score=191.46  Aligned_cols=142  Identities=20%  Similarity=0.256  Sum_probs=109.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|+||+||+++.++.++|+|||++.....  ......|+..|+|||++.+..++.++||||+||+++++++|
T Consensus       118 lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g  197 (285)
T cd05631         118 LQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG  197 (285)
T ss_pred             HHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC
Confidence            5666779999999999999999999999999987532  23445799999999999998999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+.      ......+........                                      ...+...+.++.
T Consensus       198 ~~pf~~~~~------~~~~~~~~~~~~~~~--------------------------------------~~~~~~~s~~~~  233 (285)
T cd05631         198 QSPFRKRKE------RVKREEVDRRVKEDQ--------------------------------------EEYSEKFSEDAK  233 (285)
T ss_pred             CCCCCCCCc------chhHHHHHHHhhccc--------------------------------------ccCCccCCHHHH
Confidence            999975431      111111111100000                                      001233455778


Q ss_pred             HHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      +|+++||+.||++|+|     ++++++||||++
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         234 SICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            9999999999999997     899999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=3.2e-28  Score=189.22  Aligned_cols=169  Identities=22%  Similarity=0.394  Sum_probs=121.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.+.++|+|++++||+++.++.++|+|||++......   .....+++.|+|||.+.+. .++.++||||+||+++++
T Consensus       119 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el  198 (301)
T cd07873         119 YCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM  198 (301)
T ss_pred             HHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHH
Confidence            366677799999999999999999999999999765422   2334678899999999875 478899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|.+||...+      ..+++..+.+.++.+....+........+.. .    ..+......    ..   ......+.
T Consensus       199 ~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~----~~---~~~~~~~~  260 (301)
T cd07873         199 STGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKS-Y----NYPKYRADC----LH---NHAPRLDS  260 (301)
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHcCCCChhhchhhhccccccc-c----ccCcccccc----HH---hhcCCCCH
Confidence            99999997544      4667777777777766554332211111100 0    000000000    00   01233455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.+||.+||++||.+|||++|+|+||||+.
T Consensus       261 ~~~~li~~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         261 DGAELLSKLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            7789999999999999999999999999973

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.95  E-value=3.1e-28  Score=191.74  Aligned_cols=171  Identities=20%  Similarity=0.238  Sum_probs=108.3

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCC
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE  111 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~  111 (214)
                      .++|+|+|+.||+++.++.++|+|||++..... ......|++.|+|||++.+..++.++||||+||+++++++|..||.
T Consensus       124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~  203 (331)
T cd06649         124 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP  203 (331)
T ss_pred             CEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            368999999999999999999999999876643 2344578999999999998889999999999999999999999996


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCChHHhhc----cCCccccccc--cC-ccccCCCCCCCchhhHHHhh---cCCChhh
Q psy16751        112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQS----GHRSSEFFTK--KG-ELRHIPGLKPWDLYSVLVEK---YNWTPES  181 (214)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~  181 (214)
                      ..+       ...+.   ...+.+.......    ..........  .+ .....+..............   .......
T Consensus       204 ~~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (331)
T cd06649         204 PPD-------AKELE---AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF  273 (331)
T ss_pred             CCC-------HHHHH---HHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccc
Confidence            433       11121   2222211000000    0000000000  00 00000000000001111000   0011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.++.+||.+||++||++|||++++|+||||+
T Consensus       274 ~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         274 TPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             cHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence            56789999999999999999999999999996

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0664|consensus

Probab=99.95  E-value=4.7e-29  Score=183.05  Aligned_cols=197  Identities=22%  Similarity=0.354  Sum_probs=139.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~   74 (214)
                      ||-.+++.-+.+...-+|-.+|  +..  .+|..++.|||+||.|.+++++..+||+|||+|+..+.    ..+..+-|.
T Consensus       142 DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQ  221 (449)
T KOG0664|consen  142 DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQ  221 (449)
T ss_pred             hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHH
Confidence            3444555555555555543322  222  26777789999999999999999999999999987643    244557889


Q ss_pred             cccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         75 QYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        75 ~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +|+|||++.|. .|+.+.||||+||++.|++.++.+|...+      ..+|+..|..++|+|..+......+...-..-+
T Consensus       222 YYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~------PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR  295 (449)
T KOG0664|consen  222 YYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG------PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLR  295 (449)
T ss_pred             HhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC------hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhc
Confidence            99999999998 59999999999999999999999998655      799999999999999887654333321111101


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.    ++.....   .+.+- .-+..-..+..+++.+||.+||++|.+.+++++|++..
T Consensus       296 ~~----~k~Ps~~---vLYtl-sS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~  347 (449)
T KOG0664|consen  296 AG----LRAPDTQ---RLYKI-ASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE  347 (449)
T ss_pred             cC----CCCCCcc---ceeee-cCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence            10    1110000   00000 01122334567899999999999999999999999864

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=2.3e-28  Score=194.11  Aligned_cols=174  Identities=24%  Similarity=0.363  Sum_probs=126.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC--CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF--TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|.++++|+|++|+||+++.++.+||+|||.++......  ....++..|+|||.+.+..++.++||||+||+++++++|
T Consensus       134 LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g  213 (353)
T cd07850         134 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG  213 (353)
T ss_pred             HHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHC
Confidence            666778999999999999999999999999998765432  334688899999999998999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh------cCCChh
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK------YNWTPE  180 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  180 (214)
                      ..||...+      ...+...+...+|.++.++..........+.....     ..............      ......
T Consensus       214 ~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (353)
T cd07850         214 TVLFPGTD------HIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRP-----KYAGYSFEELFPDVLFPPDSESHNKL  282 (353)
T ss_pred             CCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCC-----CCCCcchhhhCcccccCccccccccc
Confidence            99997544      46777888888888887765443222111111100     00000000000000      000123


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+..+.+|+.+||++||++|||+.|+|+||||+
T Consensus       283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         283 KASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             chhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence            456778999999999999999999999999885

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.95  E-value=1.5e-28  Score=193.28  Aligned_cols=164  Identities=16%  Similarity=0.189  Sum_probs=118.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|++++.....+....++....  +..  .+|.+.++|+|+||+||+++.++.+||+|||+++....   .....+||+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence            3455555544444444433211  222  36777789999999999999999999999999875422   2234579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      .......+..  +.                     
T Consensus       161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~------~~~~~~~~~~--~~---------------------  211 (328)
T cd05593         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILM--ED---------------------  211 (328)
T ss_pred             ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC------HHHHHHHhcc--CC---------------------
Confidence            999999998889999999999999999999999997432      1222111110  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+|+.+||+.||++|+     ++.++++||||..
T Consensus       212 -------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         212 -------------------IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             -------------------ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence                               012233455778999999999999997     8999999999963

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.95  E-value=2.1e-28  Score=191.90  Aligned_cols=164  Identities=15%  Similarity=0.168  Sum_probs=119.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.+...+.+..++....  +.  ..+|.+.++|+|+||+||+++.++.+||+|||++....   .......|++.
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  161 (321)
T cd05591          82 DLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPD  161 (321)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCcc
Confidence            3445555555554444433111  12  23667778999999999999999999999999987542   22334578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++|+||+||+++++++|+.||...+      ....+..+...  ..                    
T Consensus       162 y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~~~--~~--------------------  213 (321)
T cd05591         162 YIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN------EDDLFESILHD--DV--------------------  213 (321)
T ss_pred             ccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC------HHHHHHHHHcC--CC--------------------
Confidence            999999998889999999999999999999999997543      23333332210  00                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-------CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-------TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-------t~~e~l~hp~f~~  214 (214)
                                          ..+...+.++.+|+.+||+.||++|+       +++++++||||+.
T Consensus       214 --------------------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         214 --------------------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             --------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence                                01122345678999999999999999       8999999999963

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.95  E-value=3e-28  Score=190.72  Aligned_cols=138  Identities=15%  Similarity=0.213  Sum_probs=107.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.+.++|+|+||+||+++.++.++|+|||+++...   ......+||+.|+|||++.+..++.++||||+||+++++++
T Consensus       112 lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~  191 (316)
T cd05620         112 LHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI  191 (316)
T ss_pred             HHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHh
Confidence            666778999999999999999999999999987432   22344579999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      .......+. . +.+                                        ..+...+.++
T Consensus       192 g~~Pf~~~~------~~~~~~~~~-~-~~~----------------------------------------~~~~~~~~~~  223 (316)
T cd05620         192 GQSPFHGDD------EDELFESIR-V-DTP----------------------------------------HYPRWITKES  223 (316)
T ss_pred             CCCCCCCCC------HHHHHHHHH-h-CCC----------------------------------------CCCCCCCHHH
Confidence            999997533      222222211 1 000                                        0112234567


Q ss_pred             HHHHHHccccCCCCCCCH-HHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATA-ADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~-~e~l~hp~f~~  214 (214)
                      .+|+.+||+.||++|+|+ +++++||||++
T Consensus       224 ~~li~~~l~~dP~~R~~~~~~~~~h~~f~~  253 (316)
T cd05620         224 KDILEKLFERDPTRRLGVVGNIRGHPFFKT  253 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence            899999999999999997 58889999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.95  E-value=3.4e-28  Score=191.55  Aligned_cols=168  Identities=17%  Similarity=0.170  Sum_probs=120.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~   74 (214)
                      +|++++.....+....++..+.  +..  .+|...++|+|+|++||+++.++.+||+|||+++.....    .....||+
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~  170 (332)
T cd05614          91 EMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTI  170 (332)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCc
Confidence            4666666666666655543221  222  366677799999999999999999999999999765321    22347899


Q ss_pred             cccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         75 QYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        75 ~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      .|+|||++.+. .++.++||||+||+++++++|..||.......   ....+....  ...                   
T Consensus       171 ~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~~~~~~--~~~-------------------  226 (332)
T cd05614         171 EYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN---TQSEVSRRI--LKC-------------------  226 (332)
T ss_pred             cccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC---CHHHHHHHH--hcC-------------------
Confidence            99999999876 47889999999999999999999996432111   111111110  000                   


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                          ....+...+..+.+|+.+||+.||++|+     +++++++||||++
T Consensus       227 --------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         227 --------------------DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             --------------------CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence                                0011233455778999999999999999     7889999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.6e-28  Score=202.83  Aligned_cols=173  Identities=21%  Similarity=0.225  Sum_probs=116.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+++.....    ....+||+.|+|||++.+..++.++||||+||++++|+
T Consensus       283 LH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  362 (501)
T PHA03210        283 IHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML  362 (501)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            66777899999999999999999999999999876432    22357999999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..++.+..+   .....++..+...++....++.........+... ......+     .....+...    ...+.+
T Consensus       363 ~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~-~~~~~~~-----~~~~~~~~~----~~~~~~  429 (501)
T PHA03210        363 SHDFCPIGDGG---GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDS-AEIDHAG-----HSVPPLIRN----LGLPAD  429 (501)
T ss_pred             HCCCCCccCCC---CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhh-hhcccCc-----cchhhHHHh----cCCChH
Confidence            98755443221   1245666666655544332221100000000000 0000000     000111111    123446


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+++.+||++||.+|||+.|+|+||||..
T Consensus       430 ~~~li~kmL~~DP~~Rpsa~elL~hp~f~~  459 (501)
T PHA03210        430 FEYPLVKMLTFDWHLRPGAAELLALPLFSA  459 (501)
T ss_pred             HHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence            789999999999999999999999999963

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.5e-28  Score=192.48  Aligned_cols=172  Identities=15%  Similarity=0.215  Sum_probs=122.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.....+....++..+.  +.  ..+|...++|+|++|+||+++.++.+||+|||++..........+|++.|+|
T Consensus        87 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~a  166 (333)
T cd05600          87 DFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMA  166 (333)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccC
Confidence            4555555444444444432111  12  2367777899999999999999999999999999877665566789999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+..++.++||||+||++++|++|..||...+      ..+....+.........                     
T Consensus       167 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~---------------------  219 (333)
T cd05600         167 PEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST------PNETWENLKYWKETLQR---------------------  219 (333)
T ss_pred             hhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC------HHHHHHHHHhccccccC---------------------
Confidence            999999899999999999999999999999997533      22322222211000000                     


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                       +....            .....+.++.+|+.+||+.+|.+|+|++++++||||++
T Consensus       220 -~~~~~------------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         220 -PVYDD------------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             -CCCCc------------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence             00000            00123456789999999999999999999999999974

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.95  E-value=3e-28  Score=191.34  Aligned_cols=138  Identities=14%  Similarity=0.191  Sum_probs=108.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|+||+||+++.++.+||+|||++....   ......+||+.|+|||++.+..++.++|+||+||+++++++
T Consensus       117 lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt  196 (324)
T cd05587         117 LHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA  196 (324)
T ss_pred             HHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHh
Confidence            667777999999999999999999999999987532   22334579999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |+.||.+.+      ..+.+..+.....                                          ..+...+.++
T Consensus       197 G~~pf~~~~------~~~~~~~i~~~~~------------------------------------------~~~~~~~~~~  228 (324)
T cd05587         197 GQPPFDGED------EDELFQSIMEHNV------------------------------------------SYPKSLSKEA  228 (324)
T ss_pred             CCCCCCCCC------HHHHHHHHHcCCC------------------------------------------CCCCCCCHHH
Confidence            999997533      2233322221100                                          0122334567


Q ss_pred             HHHHHHccccCCCCCCCH-----HHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATA-----ADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~-----~e~l~hp~f~~  214 (214)
                      .+++.+||+.||.+|+++     +++++||||+.
T Consensus       229 ~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         229 VSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            899999999999999986     89999999963

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=3.2e-28  Score=191.11  Aligned_cols=164  Identities=17%  Similarity=0.236  Sum_probs=118.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....+...+.  +.  ..+|..+++|+|+|++||+++.++.+||+|||+++...   .......|++.
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  165 (323)
T cd05584          86 ELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIE  165 (323)
T ss_pred             hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCcc
Confidence            4555555544444443322111  11  23667778999999999999999999999999987542   22334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      ....+..+..  +.                     
T Consensus       166 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~~~~~~--~~---------------------  216 (323)
T cd05584         166 YMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTIDKILK--GK---------------------  216 (323)
T ss_pred             ccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--CC---------------------
Confidence            999999998889999999999999999999999997533      2222222221  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+|+.+||+.||++|+     +++++++||||+.
T Consensus       217 -------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         217 -------------------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence                               011233455678999999999999999     8999999999963

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0579|consensus

Probab=99.95  E-value=1.3e-28  Score=198.22  Aligned_cols=144  Identities=22%  Similarity=0.261  Sum_probs=114.4

Q ss_pred             hhcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-----CCCcchhhHHHH
Q psy16751         26 RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-----GYDCSADIWSVA   97 (214)
Q Consensus        26 ~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G   97 (214)
                      -|.+|.++++|||+|..|||...+|.++|+|||.+..-..   .....+|||+|||||+..+.     +|++++||||+|
T Consensus       143 Ln~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlG  222 (1187)
T KOG0579|consen  143 LNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLG  222 (1187)
T ss_pred             HHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhh
Confidence            4568888899999999999999999999999999875532   34467999999999999853     799999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      +++.+|..+.+|-..-+      .+..+-++.+.   -|+.+                                    ..
T Consensus       223 ITLIEMAqiEPPHheln------pMRVllKiaKS---ePPTL------------------------------------lq  257 (1187)
T KOG0579|consen  223 ITLIEMAQIEPPHHELN------PMRVLLKIAKS---EPPTL------------------------------------LQ  257 (1187)
T ss_pred             hHHHHHhccCCCccccc------hHHHHHHHhhc---CCCcc------------------------------------cC
Confidence            99999999988876333      34444444321   11111                                    12


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      |...+..+.||+.+||..||+.||++.++|+||||.+
T Consensus       258 PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  258 PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence            3444567789999999999999999999999999974

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.95  E-value=4.1e-28  Score=190.08  Aligned_cols=164  Identities=15%  Similarity=0.200  Sum_probs=119.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+...++...+.  +.  ..+|..+++|+|++++||+++.++.+||+|||+++...   ......+|++.
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~  161 (318)
T cd05570          82 DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPD  161 (318)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCcc
Confidence            3445555554555555433211  22  23677778999999999999999999999999987532   22334478999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||...+      .......+...  .                     
T Consensus       162 y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~------~~~~~~~i~~~--~---------------------  212 (318)
T cd05570         162 YIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD------EDELFQSILED--E---------------------  212 (318)
T ss_pred             ccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC------HHHHHHHHHcC--C---------------------
Confidence            999999999899999999999999999999999997433      22222221110  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH-----HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA-----ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~-----~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+||.+||+.||++|||+     .++++||||++
T Consensus       213 -------------------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         213 -------------------VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             -------------------CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence                               00122344567899999999999999999     99999999974

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.95  E-value=5.9e-28  Score=190.02  Aligned_cols=171  Identities=19%  Similarity=0.171  Sum_probs=120.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~   75 (214)
                      +|++++.+...+....+.....  +.  ..+|...++|+|++|+||+++.++.+||+|||+++..   .......+||+.
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  161 (329)
T cd05588          82 DLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPN  161 (329)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCcc
Confidence            4555665666666555543211  22  2367777799999999999999999999999998753   222344579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCC--CCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT--YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||.......  .......+.....                       
T Consensus       162 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-----------------------  218 (329)
T cd05588         162 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL-----------------------  218 (329)
T ss_pred             ccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH-----------------------
Confidence            999999999889999999999999999999999996322100  0000111111100                       


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC------HHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT------AADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t------~~e~l~hp~f~~  214 (214)
                                        ......+...+..+.+++.+||+.||.+|+|      ++++++||||++
T Consensus       219 ------------------~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         219 ------------------EKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             ------------------cCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence                              0001123344567789999999999999987      789999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.95  E-value=1.1e-28  Score=193.78  Aligned_cols=164  Identities=16%  Similarity=0.187  Sum_probs=117.2

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhhhc--ccc-cccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIRNA--CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~~~--~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~   74 (214)
                      +|++++.....+....++...  .+..+  +|. ..++|+|+||+||+++.++.+||+|||++....   .......||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence            345555554444444443321  13333  443 357999999999999999999999999987542   2233457999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||++.+..++.++||||+||+++++++|..||.+.+      .......+..  +.                    
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~------~~~~~~~i~~--~~--------------------  212 (325)
T cd05594         161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILM--EE--------------------  212 (325)
T ss_pred             ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC------HHHHHHHHhc--CC--------------------
Confidence            9999999998889999999999999999999999997533      1121111110  00                    


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                          ...+...+.++.+|+.+||+.||++|+     ++.++++||||++
T Consensus       213 --------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         213 --------------------IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             --------------------CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence                                011233455678999999999999997     8999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.95  E-value=6.7e-28  Score=189.71  Aligned_cols=171  Identities=19%  Similarity=0.177  Sum_probs=118.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|..++.....+....++....  +.  ..+|.+.++|+|+||+||+++.++.+||+|||+++...   .......||+.
T Consensus        82 ~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  161 (329)
T cd05618          82 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN  161 (329)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCcc
Confidence            3445555555555444433211  22  23667777999999999999999999999999987532   22334578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCC--CCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT--YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||.......  .......+.....                       
T Consensus       162 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~-----------------------  218 (329)
T cd05618         162 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-----------------------  218 (329)
T ss_pred             ccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh-----------------------
Confidence            999999999899999999999999999999999995321110  0001111111100                       


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC------HHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT------AADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t------~~e~l~hp~f~~  214 (214)
                                        ......+...+..+.+||.+||+.||++|+|      +.++++||||++
T Consensus       219 ------------------~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         219 ------------------EKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             ------------------cCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence                              0001123344567789999999999999998      479999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0596|consensus

Probab=99.95  E-value=3.1e-28  Score=192.86  Aligned_cols=141  Identities=21%  Similarity=0.338  Sum_probs=106.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCC-----------CCcch
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAG-----------YDCSA   91 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~-----------~~~~~   91 (214)
                      .+|.+.++|-|+||.|.++- .|.+||||||+|..+....     ...+||+-||+||.+....           .++++
T Consensus       475 ~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~S  553 (677)
T KOG0596|consen  475 TIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKS  553 (677)
T ss_pred             HHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCcc
Confidence            47888889999999999987 6899999999999875432     2459999999999998542           55799


Q ss_pred             hhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHH
Q psy16751         92 DIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL  171 (214)
Q Consensus        92 Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (214)
                      ||||+|||+|+|+.|++||..        -..+++++..+..+- .++         .|         +.          
T Consensus       554 DvWSLGCILYqMvYgktPf~~--------~~n~~aKl~aI~~P~-~~I---------ef---------p~----------  596 (677)
T KOG0596|consen  554 DVWSLGCILYQMVYGKTPFGQ--------IINQIAKLHAITDPN-HEI---------EF---------PD----------  596 (677)
T ss_pred             chhhhhhHHHHHHhcCCchHH--------HHHHHHHHHhhcCCC-ccc---------cc---------cC----------
Confidence            999999999999999999962        112444444432220 000         00         00          


Q ss_pred             HhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       172 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                           .+.  ..++.++|..||.+||++|+|+.++|+|||+.
T Consensus       597 -----~~~--~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~  631 (677)
T KOG0596|consen  597 -----IPE--NDELIDVMKCCLARDPKKRWSIPELLQHPFLQ  631 (677)
T ss_pred             -----CCC--chHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence                 011  12378999999999999999999999999975

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.95  E-value=8.3e-28  Score=191.58  Aligned_cols=167  Identities=11%  Similarity=0.188  Sum_probs=117.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------   66 (214)
                      +|.+++.+...+....++..+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||+++.....            
T Consensus        87 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~  166 (363)
T cd05628          87 DMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHS  166 (363)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccc
Confidence            4566666666665555543221  22  2367777899999999999999999999999998754211            


Q ss_pred             --------------------------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCC
Q psy16751         67 --------------------------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTR  120 (214)
Q Consensus        67 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~  120 (214)
                                                ....+||+.|+|||++.+..++.++|+||+||++++|++|..||.+.+      
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~------  240 (363)
T cd05628         167 LPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------  240 (363)
T ss_pred             ccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC------
Confidence                                      123479999999999999899999999999999999999999997533      


Q ss_pred             cHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCC--
Q psy16751        121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK--  198 (214)
Q Consensus       121 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~--  198 (214)
                      ..+...++......+.                                      +......+.++.+|+.+|++ +|.  
T Consensus       241 ~~~~~~~i~~~~~~~~--------------------------------------~p~~~~~s~~~~~li~~l~~-~~~~r  281 (363)
T cd05628         241 PQETYKKVMNWKETLI--------------------------------------FPPEVPISEKAKDLILRFCC-EWEHR  281 (363)
T ss_pred             HHHHHHHHHcCcCccc--------------------------------------CCCcCCCCHHHHHHHHHHcC-Chhhc
Confidence            2333333322100000                                      00001234567899998776 444  


Q ss_pred             -CCCCHHHHhcCCCCCC
Q psy16751        199 -LRATAADCLQHPWLQN  214 (214)
Q Consensus       199 -~R~t~~e~l~hp~f~~  214 (214)
                       .||+++|+++||||++
T Consensus       282 ~~r~~~~ei~~hp~f~~  298 (363)
T cd05628         282 IGAPGVEEIKTNPFFEG  298 (363)
T ss_pred             CCCCCHHHHhCCCCCCC
Confidence             4589999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.95  E-value=6.8e-28  Score=188.66  Aligned_cols=164  Identities=17%  Similarity=0.234  Sum_probs=118.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+.+..+.....  +.  ..+|...++|+|+|++||+++.++.+||+|||++....   ......+||+.
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~  161 (316)
T cd05592          82 DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPD  161 (316)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCcc
Confidence            4555555555555555433211  22  23677778999999999999999999999999997542   22334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||.+.+      ..+.+..+..   ..+                   
T Consensus       162 y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~---~~~-------------------  213 (316)
T cd05592         162 YIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED------EDELFDSILN---DRP-------------------  213 (316)
T ss_pred             ccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc---CCC-------------------
Confidence            999999998889999999999999999999999997543      2222222211   000                   


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH-HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA-ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~-~e~l~hp~f~~  214 (214)
                                          ..+...+.++.+|+.+||+.||++|+++ .++++||||+.
T Consensus       214 --------------------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         214 --------------------HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             --------------------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence                                0122334566899999999999999986 58889999973

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0585|consensus

Probab=99.95  E-value=9.3e-29  Score=192.74  Aligned_cols=140  Identities=16%  Similarity=0.258  Sum_probs=111.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC--------CCCCCCcCCcccchHHHhcC---C-CCcchhhHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--------HFTEDVQTRQYRSLEVLINA---G-YDCSADIWS   95 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--------~~~~~~~~~~y~aPE~~~~~---~-~~~~~Diws   95 (214)
                      .+|.++++||||||+|+|+..+|.|||+|||.+.....        .....+|||.++|||.+.+.   . .+.+.||||
T Consensus       225 YLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWa  304 (576)
T KOG0585|consen  225 YLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWA  304 (576)
T ss_pred             HHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhh
Confidence            47888999999999999999999999999999986621        23346999999999999984   2 347999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhc
Q psy16751         96 VACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY  175 (214)
Q Consensus        96 ~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (214)
                      +||+||+++.|+.||.+..      ..+...+|...--.+                                        
T Consensus       305 lGVTLYCllfG~~PF~~~~------~~~l~~KIvn~pL~f----------------------------------------  338 (576)
T KOG0585|consen  305 LGVTLYCLLFGQLPFFDDF------ELELFDKIVNDPLEF----------------------------------------  338 (576)
T ss_pred             hhhhHHHhhhccCCcccch------HHHHHHHHhcCcccC----------------------------------------
Confidence            9999999999999998544      344444443211011                                        


Q ss_pred             CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       176 ~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +..++....++|||.+||++||.+|++..++..|||..
T Consensus       339 P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt  376 (576)
T KOG0585|consen  339 PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT  376 (576)
T ss_pred             CCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence            11134566789999999999999999999999999964

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.95  E-value=6.2e-28  Score=189.43  Aligned_cols=164  Identities=13%  Similarity=0.142  Sum_probs=118.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+....+...+.  +.  ..+|...++|+|+||+||+++.++.+||+|||+++...   ......+||+.
T Consensus        87 ~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  166 (323)
T cd05616          87 DLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPD  166 (323)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChh
Confidence            3455555544444443322111  11  13666777999999999999999999999999997542   22334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||...+      .......+....                       
T Consensus       167 y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~------~~~~~~~i~~~~-----------------------  217 (323)
T cd05616         167 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHN-----------------------  217 (323)
T ss_pred             hcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCC-----------------------
Confidence            999999999899999999999999999999999997533      223332222110                       


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+++.+||+.||++|++     ..++++||||+.
T Consensus       218 -------------------~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         218 -------------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             -------------------CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence                               0112334556789999999999999998     489999999973

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=3.7e-28  Score=190.74  Aligned_cols=164  Identities=15%  Similarity=0.174  Sum_probs=118.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|+.++.+...+....++..+.  +..  .+|.+.++|+|+||+||+++.++.+||+|||++.....   ......|++.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence            3445555544444444433211  222  35667779999999999999999999999999875422   2234578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      .......+...  .                     
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~~~~~--~---------------------  211 (323)
T cd05595         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILME--E---------------------  211 (323)
T ss_pred             cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHhcC--C---------------------
Confidence            999999998889999999999999999999999997433      12222221110  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+|+.+||+.||++|+     ++.++++||||.+
T Consensus       212 -------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         212 -------------------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence                               011233456778999999999999998     8999999999963

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=8.7e-28  Score=188.91  Aligned_cols=171  Identities=18%  Similarity=0.141  Sum_probs=120.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|..++...+.+....++....  +.  ..+|...++|+|+||+||+++.++.+||+|||++....   ......+||+.
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  161 (327)
T cd05617          82 DLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPN  161 (327)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcc
Confidence            3455555555555554433211  22  23667777999999999999999999999999987532   22344579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||..............+......  .                     
T Consensus       162 y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~---------------------  218 (327)
T cd05617         162 YIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--K---------------------  218 (327)
T ss_pred             cCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--C---------------------
Confidence            99999999989999999999999999999999999643322211122222221110  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC------HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT------AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t------~~e~l~hp~f~~  214 (214)
                                        ....+...+..+.+++.+||+.||++|++      ++++++||||++
T Consensus       219 ------------------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~  265 (327)
T cd05617         219 ------------------PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS  265 (327)
T ss_pred             ------------------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence                              01122334556789999999999999998      479999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0668|consensus

Probab=99.95  E-value=1.6e-28  Score=175.91  Aligned_cols=175  Identities=20%  Similarity=0.294  Sum_probs=124.1

Q ss_pred             cccccccccccccccccccCC-CcceEEeecCCceecc--CCCCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l  103 (214)
                      .||+.+++|||+||.|++++. .-.++|+|+|+|....  .....++.+..|..||++...+ |+.+.|+||+||+++.|
T Consensus       147 yCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~m  226 (338)
T KOG0668|consen  147 YCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM  226 (338)
T ss_pred             HHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHH
Confidence            599999999999999999876 5789999999998663  4566779999999999999875 89999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHH-hhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI-IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +..+.||+...     ++-+|+.+|.+.+|+-...- +.+....   .+  .......+.-.++.+..+.... ...-.+
T Consensus       227 iFrkepFFhG~-----dN~DQLVkIakVLGt~el~~Yl~KY~i~---Ld--p~~~~i~~~~~rk~w~~Fi~~~-n~hl~~  295 (338)
T KOG0668|consen  227 IFRKEPFFHGH-----DNYDQLVKIAKVLGTDELYAYLNKYQID---LD--PQFEDILGRHSRKPWSRFINSE-NQHLVS  295 (338)
T ss_pred             HhccCcccCCC-----CCHHHHHHHHHHhChHHHHHHHHHHccC---CC--hhHhhHhhccccccHHHhCCcc-ccccCC
Confidence            99887765422     17899999999999732211 1111000   00  0000000001111111111111 112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +++.||+.++|.+|..+|+||+|++.||||.
T Consensus       296 peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  296 PEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             hHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence            6778999999999999999999999999995

>KOG0595|consensus

Probab=99.95  E-value=2.9e-28  Score=186.82  Aligned_cols=164  Identities=20%  Similarity=0.341  Sum_probs=118.0

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhh------cccccccccccccccccccCCC------cceEEeecCCceeccC--CCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRN------ACWVDKHFTEDVQTRQYRSLPP------FLFDIGTYRNACWVDK--HFT   68 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~------~~~~~~~~h~d~k~~nil~~~~------~~~kl~Dfg~a~~~~~--~~~   68 (214)
                      ||-.|+...+.+-+.-+  +.|+++      ++|.++++|||+||+|||+..+      -.+||+|||+|+....  ...
T Consensus        95 DLs~yi~~~~~l~e~t~--r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~  172 (429)
T KOG0595|consen   95 DLSDYIRRRGRLPEATA--RHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAE  172 (429)
T ss_pred             CHHHHHHHcCCCCHHHH--HHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHH
Confidence            45566666665555444  334443      4888889999999999998775      5789999999998864  456


Q ss_pred             CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc
Q psy16751         69 EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE  148 (214)
Q Consensus        69 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  148 (214)
                      +.+|++.|||||++...+|+.++|+||+|+++|++++|++||...+      ..+.+..+.+.-..+|.           
T Consensus       173 tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t------~~eL~~~~~k~~~~~~~-----------  235 (429)
T KOG0595|consen  173 TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET------PKELLLYIKKGNEIVPV-----------  235 (429)
T ss_pred             HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC------HHHHHHHHhccccccCc-----------
Confidence            7799999999999999999999999999999999999999997544      22222222111000000           


Q ss_pred             cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                                  .+...+....+|+...|+.+|.+|.+..+-+.|++..
T Consensus       236 ----------------------------~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~  272 (429)
T KOG0595|consen  236 ----------------------------LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLA  272 (429)
T ss_pred             ----------------------------hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcc
Confidence                                        1122233445788888888888888888888777653

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.95  E-value=5.3e-28  Score=189.90  Aligned_cols=139  Identities=17%  Similarity=0.258  Sum_probs=109.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|..+++|+|++++||+++.++.+||+|||++....   ......+|++.|+|||.+.+..++.++||||+||++++++
T Consensus       116 ~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  195 (324)
T cd05589         116 YLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEML  195 (324)
T ss_pred             HHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHH
Confidence            3677778999999999999999999999999987542   2233457999999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+.+..+...  .                                        ...+...+..
T Consensus       196 ~G~~pf~~~~------~~~~~~~i~~~--~----------------------------------------~~~p~~~~~~  227 (324)
T cd05589         196 VGESPFPGDD------EEEVFDSIVND--E----------------------------------------VRYPRFLSRE  227 (324)
T ss_pred             hCCCCCCCCC------HHHHHHHHHhC--C----------------------------------------CCCCCCCCHH
Confidence            9999997543      22332222211  0                                        0012334556


Q ss_pred             HHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||+.||++||     ++.++++||||++
T Consensus       228 ~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         228 AISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             HHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            78999999999999999     6999999999974

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.95  E-value=4.7e-28  Score=190.15  Aligned_cols=164  Identities=15%  Similarity=0.130  Sum_probs=118.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++...+  +.  +.+|.++++|+|+++.||+++.++.+||+|||++....   ......+||+.
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  161 (323)
T cd05575          82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPE  161 (323)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChh
Confidence            3455555544444444432111  12  23677778999999999999999999999999987542   22334578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      ..+....+..   ..                    
T Consensus       162 y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~---~~--------------------  212 (323)
T cd05575         162 YLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------TAEMYDNILN---KP--------------------  212 (323)
T ss_pred             hcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC------HHHHHHHHHc---CC--------------------
Confidence            999999998889999999999999999999999997533      1222222211   00                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH----HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA----ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~----~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+++.+||+.||++|+++    .++++||||++
T Consensus       213 -------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         213 -------------------LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence                               00122335567899999999999999997    69999999963

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.95  E-value=1.2e-27  Score=187.37  Aligned_cols=139  Identities=18%  Similarity=0.251  Sum_probs=107.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|+|+.||+++.++.+||+|||++....   .......||+.|+|||++.+..++.++|+||+||++++++
T Consensus       111 ~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~  190 (316)
T cd05619         111 FLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEML  190 (316)
T ss_pred             HHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHH
Confidence            3667777999999999999999999999999987532   2233457899999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      ..+....+ .. +.+                                        ..+...+.+
T Consensus       191 ~G~~pf~~~~------~~~~~~~i-~~-~~~----------------------------------------~~~~~~~~~  222 (316)
T cd05619         191 IGQSPFHGHD------EEELFQSI-RM-DNP----------------------------------------CYPRWLTRE  222 (316)
T ss_pred             hCCCCCCCCC------HHHHHHHH-Hh-CCC----------------------------------------CCCccCCHH
Confidence            9999997533      22222221 11 000                                        011223446


Q ss_pred             HHHHHHHccccCCCCCCCHH-HHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAA-DCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~-e~l~hp~f~~  214 (214)
                      +.+|+.+||+.||++|+++. ++++||||++
T Consensus       223 ~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05619         223 AKDILVKLFVREPERRLGVKGDIRQHPFFRE  253 (316)
T ss_pred             HHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence            68999999999999999996 8999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=3.5e-27  Score=181.80  Aligned_cols=166  Identities=24%  Similarity=0.381  Sum_probs=116.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++++|++++.++.++|+|||++......   .....+++.|+|||.+.+.. ++.++||||+||++++++
T Consensus       115 LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  194 (284)
T cd07839         115 CHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA  194 (284)
T ss_pred             HHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHH
Confidence            56667799999999999999999999999999866432   23446788999999998764 789999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.....     ..+.+..+.+.++.++............+       ...+.......   ..   ...+..+.+
T Consensus       195 tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~---~~~~~~~~~  256 (284)
T cd07839         195 NAGRPLFPGND-----VDDQLKRIFRLLGTPTEESWPGVSKLPDY-------KPYPMYPATTS---LV---NVVPKLNST  256 (284)
T ss_pred             hcCCCCcCCCC-----HHHHHHHHHHHhCCCChHHhHHhhhcccc-------cccCCCCCcch---hh---hhcccCCHH
Confidence            98877653321     35666667777666554433221111111       00000000000   00   011234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+|+.+||+.||.+|||++++++||||
T Consensus       257 ~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         257 GRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             HHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            7899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.95  E-value=1e-27  Score=188.95  Aligned_cols=172  Identities=20%  Similarity=0.198  Sum_probs=107.8

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCC
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE  111 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~  111 (214)
                      .++|+|+||+||+++.++.+||+|||++..... ......|+..|+|||.+.+..++.++|+||+||+++++++|..||.
T Consensus       124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~  203 (333)
T cd06650         124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP  203 (333)
T ss_pred             CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            468999999999999999999999999876533 2334578999999999998889999999999999999999999996


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc-ccCccccCCCCCCC-c---hhhHHHhhc---CCChhhHH
Q psy16751        112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT-KKGELRHIPGLKPW-D---LYSVLVEKY---NWTPESAR  183 (214)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~---~~~~~~~~~---~~~~~~~~  183 (214)
                      ...       ...+   ....+.................. ........+...+. .   .........   ......+.
T Consensus       204 ~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (333)
T cd06650         204 PPD-------AKEL---ELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGA  273 (333)
T ss_pred             Ccc-------hhHH---HHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCH
Confidence            433       1111   11111111000000000000000 00000000111110 0   000000000   00112356


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.+|+.+||++||++|||++|+++||||+.
T Consensus       274 ~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~  304 (333)
T cd06650         274 EFQDFVNKCLIKNPAERADLKQLMVHAFIKR  304 (333)
T ss_pred             HHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence            7899999999999999999999999999963

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0577|consensus

Probab=99.95  E-value=4.4e-28  Score=193.68  Aligned_cols=139  Identities=22%  Similarity=0.276  Sum_probs=115.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC---CCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA---GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|+++.+|||+|..|||+..+|.||++|||+|... .+....+|||+|||||+++..   .|+-++||||+|+++.|+.
T Consensus       141 YLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~-~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELA  219 (948)
T KOG0577|consen  141 YLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM-APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  219 (948)
T ss_pred             HHHHhhHHhhhccccceEecCCCeeeeccccchhhc-CchhcccCCccccchhHheeccccccCCccceeeccchhhhhh
Confidence            366777799999999999999999999999999654 566778999999999999964   5999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      -+++|.+..+      .+..+..|.+.-.  |                        ..              -....+..
T Consensus       220 ERkPPlFnMN------AMSALYHIAQNes--P------------------------tL--------------qs~eWS~~  253 (948)
T KOG0577|consen  220 ERKPPLFNMN------AMSALYHIAQNES--P------------------------TL--------------QSNEWSDY  253 (948)
T ss_pred             hcCCCccCch------HHHHHHHHHhcCC--C------------------------CC--------------CCchhHHH
Confidence            9999988666      4666666654311  1                        00              12445667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      |+.|+..||+.-|.+|||.+++|+|+|+.
T Consensus       254 F~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  254 FRNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence            89999999999999999999999999974

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.2e-28  Score=191.33  Aligned_cols=167  Identities=16%  Similarity=0.236  Sum_probs=119.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCC-----------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----------   67 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----------   67 (214)
                      +|.+++.....+....++..+.  +.  ..+|..+++|+|+||+||+++.++.+||+|||++.......           
T Consensus        87 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~  166 (350)
T cd05573          87 DLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHN  166 (350)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccc
Confidence            4555665554544444432211  22  23666777999999999999999999999999998654322           


Q ss_pred             ---------------------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHH
Q psy16751         68 ---------------------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA  126 (214)
Q Consensus        68 ---------------------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~  126 (214)
                                           ....||+.|+|||++.+..++.++||||+||++++|++|..||...+      ......
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~  240 (350)
T cd05573         167 LLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT------LQETYN  240 (350)
T ss_pred             ccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC------HHHHHH
Confidence                                 23478999999999999999999999999999999999999997543      222222


Q ss_pred             HHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-HHH
Q psy16751        127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-AAD  205 (214)
Q Consensus       127 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-~~e  205 (214)
                      .+........                                      .......+..+.+||.+||+ ||.+|++ +++
T Consensus       241 ~i~~~~~~~~--------------------------------------~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~  281 (350)
T cd05573         241 KIINWKESLR--------------------------------------FPPDPPVSPEAIDLICRLLC-DPEDRLGSFEE  281 (350)
T ss_pred             HHhccCCccc--------------------------------------CCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHH
Confidence            2222100000                                      00011135577899999998 9999999 999


Q ss_pred             HhcCCCCCC
Q psy16751        206 CLQHPWLQN  214 (214)
Q Consensus       206 ~l~hp~f~~  214 (214)
                      +++||||++
T Consensus       282 ll~hp~~~~  290 (350)
T cd05573         282 IKSHPFFKG  290 (350)
T ss_pred             HhcCCCcCC
Confidence            999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.1e-28  Score=191.65  Aligned_cols=165  Identities=18%  Similarity=0.229  Sum_probs=117.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|+.++.....+....++..+.  +.  ..+|.+.++|+|+||+||+++.++.++|+|||++....   ......+||+.
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~  161 (330)
T cd05586          82 ELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTE  161 (330)
T ss_pred             hHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCcc
Confidence            4555555555555555543221  22  23677778999999999999999999999999987542   22334579999


Q ss_pred             ccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         76 YRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        76 y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      |+|||++.+. .++.++||||+||++++|++|..||...+      ..+....+..  +...                  
T Consensus       162 y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~------~~~~~~~i~~--~~~~------------------  215 (330)
T cd05586         162 YLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED------TQQMYRNIAF--GKVR------------------  215 (330)
T ss_pred             ccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC------HHHHHHHHHc--CCCC------------------
Confidence            9999999865 48899999999999999999999997533      1222221110  0000                  


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC----CHHHHhcCCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA----TAADCLQHPWLQN  214 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~----t~~e~l~hp~f~~  214 (214)
                          .                 .....+..+.+|+.+||+.||.+|+    ++.++++||||++
T Consensus       216 ----~-----------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         216 ----F-----------------PKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             ----C-----------------CCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence                0                 0012344668999999999999998    7999999999963

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-27  Score=191.01  Aligned_cols=167  Identities=13%  Similarity=0.236  Sum_probs=118.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------   66 (214)
                      +|.+++.....+....++..+.  +..  .+|.+.++|+|+||+||+++.++.++|+|||++......            
T Consensus        87 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  166 (364)
T cd05599          87 DMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHA  166 (364)
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccc
Confidence            4666666666655555543221  222  367777899999999999999999999999998754211            


Q ss_pred             -----------------------------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCC
Q psy16751         67 -----------------------------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT  117 (214)
Q Consensus        67 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~  117 (214)
                                                   ....+||+.|+|||++.+.+++.++||||+||++++|++|..||...+   
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~---  243 (364)
T cd05599         167 LPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN---  243 (364)
T ss_pred             ccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC---
Confidence                                         112369999999999998899999999999999999999999997533   


Q ss_pred             CCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCC
Q psy16751        118 YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDP  197 (214)
Q Consensus       118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp  197 (214)
                         ..+....+...-...+                                      .......+.++.+||.+||. +|
T Consensus       244 ---~~~~~~~i~~~~~~~~--------------------------------------~~~~~~~s~~~~~li~~ll~-~p  281 (364)
T cd05599         244 ---PQETYRKIINWKETLQ--------------------------------------FPDEVPLSPEAKDLIKRLCC-EA  281 (364)
T ss_pred             ---HHHHHHHHHcCCCccC--------------------------------------CCCCCCCCHHHHHHHHHHcc-CH
Confidence               2222222221000000                                      00011234567899999997 99


Q ss_pred             CCCCC---HHHHhcCCCCCC
Q psy16751        198 KLRAT---AADCLQHPWLQN  214 (214)
Q Consensus       198 ~~R~t---~~e~l~hp~f~~  214 (214)
                      .+|++   ++++++||||+.
T Consensus       282 ~~R~~~~~~~~ll~h~~~~~  301 (364)
T cd05599         282 ERRLGNNGVNEIKSHPFFKG  301 (364)
T ss_pred             hhcCCCCCHHHHhcCCCcCC
Confidence            99998   999999999973

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0192|consensus

Probab=99.95  E-value=4.4e-27  Score=184.73  Aligned_cols=135  Identities=18%  Similarity=0.171  Sum_probs=106.3

Q ss_pred             cccccc-cccccccccccccCCCc-ceEEeecCCceeccC---CCCCCCcCCcccchHHHh--cCCCCcchhhHHHHHHH
Q psy16751         28 ACWVDK-HFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLI--NAGYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~-~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~--~~~~~~~~Diws~G~~l  100 (214)
                      .+|.+. ++|||+|+.|+|++..+ .+||+|||+++....   ..+...||+.|||||++.  +..|+.++||||||+++
T Consensus       157 YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvl  236 (362)
T KOG0192|consen  157 YLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVL  236 (362)
T ss_pred             HHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHH
Confidence            467777 89999999999999997 999999999987763   344568999999999999  55899999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ||+++|..||....      ..+....+... +.-|                                       ..+..
T Consensus       237 WEl~t~~~Pf~~~~------~~~~~~~v~~~-~~Rp---------------------------------------~~p~~  270 (362)
T KOG0192|consen  237 WELLTGEIPFEDLA------PVQVASAVVVG-GLRP---------------------------------------PIPKE  270 (362)
T ss_pred             HHHHHCCCCCCCCC------HHHHHHHHHhc-CCCC---------------------------------------CCCcc
Confidence            99999999998544      22222222111 1111                                       12344


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++..+..||.+||..||++||++.+++.
T Consensus       271 ~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  271 CPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             CCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            6678889999999999999999998763

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=4.6e-27  Score=183.36  Aligned_cols=168  Identities=24%  Similarity=0.275  Sum_probs=120.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++++||++..++.++|+|||.+......   .....+++.|+|||.+.+. .++.++|+||+||++++++
T Consensus       124 lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~  203 (309)
T cd07845         124 LHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELL  203 (309)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHH
Confidence            56666799999999999999999999999999876532   2333567889999999875 5889999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.++|...+      ..+++..+....+.+...+.............  .      ...... ......   ....+..
T Consensus       204 ~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~-~~~~~~---~~~~~~~  265 (309)
T cd07845         204 AHKPLLPGKS------EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF--T------LPKQPY-NNLKHK---FPWLSEA  265 (309)
T ss_pred             hCCCCCCCCC------HHHHHHHHHHhcCCCChhhchhhhcccccccc--c------ccCCCC-CchHHh---ccccCHH
Confidence            9999997544      57777888887777665543322111110000  0      000000 000000   1123556


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||++||++|||++++++||||++
T Consensus       266 ~~~li~~ml~~dp~~R~t~~~il~h~~f~~  295 (309)
T cd07845         266 GLRLLNFLLMYDPKKRATAEEALESSYFKE  295 (309)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            789999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.94  E-value=1.4e-27  Score=191.44  Aligned_cols=167  Identities=15%  Similarity=0.200  Sum_probs=114.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--h--hhcccccccccccccccccccCCCcceEEeecCCceeccC-------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--I--RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------------   65 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~--~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------------   65 (214)
                      +|.+++...+.+....++..+.  +  -..+|...++|+|+||+||+++.++.+||+|||+|.....             
T Consensus        87 ~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~  166 (382)
T cd05625          87 DMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHV  166 (382)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccc
Confidence            4556655544444433332111  1  1246777789999999999999999999999999753210             


Q ss_pred             -------------------------------------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCC
Q psy16751         66 -------------------------------------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDY  108 (214)
Q Consensus        66 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~  108 (214)
                                                           .....+||+.|+|||++.+.+|+.++||||+||++++|++|.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~  246 (382)
T cd05625         167 RQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP  246 (382)
T ss_pred             ccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCC
Confidence                                                 0112468999999999999899999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHH
Q psy16751        109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF  188 (214)
Q Consensus       109 ~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  188 (214)
                      ||.+.+      ..+....+.......+                                      .......++++.++
T Consensus       247 Pf~~~~------~~~~~~~i~~~~~~~~--------------------------------------~p~~~~~s~~~~~l  282 (382)
T cd05625         247 PFLAQT------PLETQMKVINWQTSLH--------------------------------------IPPQAKLSPEASDL  282 (382)
T ss_pred             CCCCCC------HHHHHHHHHccCCCcC--------------------------------------CCCcccCCHHHHHH
Confidence            997533      2222222221100000                                      00012234567899


Q ss_pred             HHHccccCCCCCCC---HHHHhcCCCCCC
Q psy16751        189 LRPMLAYDPKLRAT---AADCLQHPWLQN  214 (214)
Q Consensus       189 l~~~l~~dp~~R~t---~~e~l~hp~f~~  214 (214)
                      +.+|+ .+|.+|++   ++++++||||++
T Consensus       283 i~~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         283 IIKLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             HHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence            99976 59999997   999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0603|consensus

Probab=99.94  E-value=1e-27  Score=192.70  Aligned_cols=136  Identities=20%  Similarity=0.276  Sum_probs=111.9

Q ss_pred             ccccccccccccccccccc-CCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRS-LPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|.+.++|||++|.|||+ ...+.++|+|||.++.....+-..+-|..|.|||++...+|+.++|+||+|++||+|++|
T Consensus       430 ~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G  509 (612)
T KOG0603|consen  430 YLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTG  509 (612)
T ss_pred             HHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhC
Confidence            4677888999999999999 688999999999998776665566778899999999988999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      +.||....+      ...+   ...++.++                                        .....+..++
T Consensus       510 ~tp~~~~P~------~~ei---~~~i~~~~----------------------------------------~s~~vS~~AK  540 (612)
T KOG0603|consen  510 RTLFAAHPA------GIEI---HTRIQMPK----------------------------------------FSECVSDEAK  540 (612)
T ss_pred             CCccccCCc------hHHH---HHhhcCCc----------------------------------------cccccCHHHH
Confidence            999986553      1111   11111111                                        1145567889


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +|+++||++||.+|+|+++++.||||
T Consensus       541 dLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  541 DLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHHhccCChhhCcChhhhccCcch
Confidence            99999999999999999999999998

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.94  E-value=2.7e-27  Score=189.76  Aligned_cols=168  Identities=14%  Similarity=0.163  Sum_probs=115.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--h--hhcccccccccccccccccccCCCcceEEeecCCceeccC-------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--I--RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------------   65 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~--~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------------   65 (214)
                      +|.+++.....+....++..+.  +  -..+|...++|+|+||+||+++.++.+||+|||++.....             
T Consensus        87 ~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~  166 (381)
T cd05626          87 DMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHI  166 (381)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccc
Confidence            4566665555554444433211  1  1246777789999999999999999999999999753310             


Q ss_pred             -------------------------------------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCC
Q psy16751         66 -------------------------------------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDY  108 (214)
Q Consensus        66 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~  108 (214)
                                                           .....+||+.|+|||++.+.+++.++||||+||++++|++|..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~  246 (381)
T cd05626         167 RQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQP  246 (381)
T ss_pred             cccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCC
Confidence                                                 0123479999999999998889999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHH
Q psy16751        109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF  188 (214)
Q Consensus       109 ~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  188 (214)
                      ||...+      ..+....+....+.+.                                      .......+.++.+|
T Consensus       247 Pf~~~~------~~~~~~~i~~~~~~~~--------------------------------------~~~~~~~s~~~~dl  282 (381)
T cd05626         247 PFLAPT------PTETQLKVINWENTLH--------------------------------------IPPQVKLSPEAVDL  282 (381)
T ss_pred             CCcCCC------HHHHHHHHHccccccC--------------------------------------CCCCCCCCHHHHHH
Confidence            997533      2222222221100000                                      00012245577899


Q ss_pred             HHHcccc--CCCCCCCHHHHhcCCCCCC
Q psy16751        189 LRPMLAY--DPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       189 l~~~l~~--dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|++.  +|..|+|++++++||||++
T Consensus       283 i~~ll~~~~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         283 ITKLCCSAEERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             HHHHccCcccccCCCCHHHHhcCcccCC
Confidence            9996654  4445999999999999963

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=5.8e-27  Score=180.60  Aligned_cols=168  Identities=26%  Similarity=0.422  Sum_probs=122.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|+++.||+++.++.++|+|||.+......    .....++..|+|||.+.+.. ++.++||||+||++++
T Consensus       114 ~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  193 (286)
T cd07832         114 YMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAE  193 (286)
T ss_pred             HHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHH
Confidence            356677799999999999999999999999999876543    33457888999999987654 6889999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|.++|.+.+      +...+..+....+.+.............+-.  .   ..+.........       .....+
T Consensus       194 l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~-------~~~~~~  255 (286)
T cd07832         194 LLNGSPLFPGEN------DIEQLAIVFRTLGTPNEETWPGLTSLPDYNK--I---TFPESKPIPLEE-------IFPDAS  255 (286)
T ss_pred             HHcCCcCcCCCC------HHHHHHHHHHHcCCCChHHHhhccCcchhhc--c---cCCCCCcchHHH-------hCCCcc
Confidence            999988887544      5677777888777766544433222111100  0   000000000100       112334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.+|+.+||+.+|++|||++++|+||||.
T Consensus       256 ~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         256 PEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            6788999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=5.1e-27  Score=185.64  Aligned_cols=170  Identities=25%  Similarity=0.368  Sum_probs=123.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|.+.++|+|++++||+++.++.++|+|||+++..........++..|+|||.+.+. .++.++|+||+||+++++++|
T Consensus       132 ~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g  211 (342)
T cd07879         132 YIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG  211 (342)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhC
Confidence            3566677999999999999999999999999998765555556788899999999874 588999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      +.||.+.+      ....+..+....|.+++.+............    ....+.........       ..+..+..+.
T Consensus       212 ~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------~~~~~~~~~~  274 (342)
T cd07879         212 KTLFKGKD------YLDQLTQILKVTGVPGPEFVQKLEDKAAKSY----IKSLPKYPRKDFST-------LFPKASPQAV  274 (342)
T ss_pred             CCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhcccchHHH----HhhcCCcccchHHH-------HhcCCCHHHH
Confidence            99997543      4667777777777776665443322110000    00000000000000       0122345678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +|+.+||+.||.+|||++++++||||+.
T Consensus       275 ~li~~~l~~dP~~R~~~~e~l~h~~f~~  302 (342)
T cd07879         275 DLLEKMLELDVDKRLTATEALEHPYFDS  302 (342)
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence            9999999999999999999999999973

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.94  E-value=5.5e-27  Score=184.06  Aligned_cols=164  Identities=12%  Similarity=0.155  Sum_probs=119.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|.+++.....+....+...+.  +.  ..+|...++|+|+||+||+++.++.+||+|||+++....   ......||+.
T Consensus        87 ~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~  166 (323)
T cd05615          87 DLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPD  166 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCcc
Confidence            4555555555555555433211  12  236677779999999999999999999999999875422   2234578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++|+||+||+++++++|..||.+.+      .......+...  .                     
T Consensus       167 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~~--~---------------------  217 (323)
T cd05615         167 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELFQSIMEH--N---------------------  217 (323)
T ss_pred             ccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhC--C---------------------
Confidence            999999998889999999999999999999999997533      22222222211  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+++.+||+.+|.+|++     .+++++||||+.
T Consensus       218 -------------------~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         218 -------------------VSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             -------------------CCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence                               0012233456789999999999999997     578999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.94  E-value=3.7e-27  Score=181.54  Aligned_cols=142  Identities=16%  Similarity=0.208  Sum_probs=108.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|+++.||+++.++.++|+|||.+......   .....|++.|+|||.+.+..++.++|+||+||+++++++
T Consensus       113 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~  192 (280)
T cd05608         113 LHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA  192 (280)
T ss_pred             HHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh
Confidence            66777899999999999999999999999999765432   233478999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.......   ....+.  ......                                       ....+...+..+
T Consensus       193 g~~pf~~~~~~~---~~~~~~--~~~~~~---------------------------------------~~~~~~~~~~~~  228 (280)
T cd05608         193 ARGPFRARGEKV---ENKELK--QRILND---------------------------------------SVTYPDKFSPAS  228 (280)
T ss_pred             CCCCCCCCCcch---hHHHHH--Hhhccc---------------------------------------CCCCcccCCHHH
Confidence            999997433100   001000  000000                                       001123345677


Q ss_pred             HHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                      .+|+.+||+.||++|+     |++++++||||++
T Consensus       229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         229 KSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            8999999999999999     8899999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=2.9e-27  Score=185.82  Aligned_cols=163  Identities=14%  Similarity=0.125  Sum_probs=118.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|.+++.....+....++....  ++  ..+|.+.++|+|+|++||+++.++.+||+|||+++....   .....+||+.
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  161 (325)
T cd05602          82 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPE  161 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCcc
Confidence            3455555544444444432111  22  236777789999999999999999999999999875422   2334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||...+      ..+.+..+...  .                     
T Consensus       162 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~--~---------------------  212 (325)
T cd05602         162 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNK--P---------------------  212 (325)
T ss_pred             ccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC------HHHHHHHHHhC--C---------------------
Confidence            999999999899999999999999999999999997533      22222222210  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHH----HHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA----DCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~----e~l~hp~f~  213 (214)
                                         ...++..+..+.+++.+||+.||.+|+++.    ++++|+||.
T Consensus       213 -------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~  255 (325)
T cd05602         213 -------------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFS  255 (325)
T ss_pred             -------------------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccC
Confidence                               001223455678999999999999999876    899999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0986|consensus

Probab=99.94  E-value=8.6e-28  Score=186.54  Aligned_cols=142  Identities=20%  Similarity=0.277  Sum_probs=113.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceecc--CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++.||+||+|||++.+|.|+|.|+|+|..+.  ++...++||.+|||||++.+..|+.+.|.||+||++|+|+.|
T Consensus       303 lH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G  382 (591)
T KOG0986|consen  303 LHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAG  382 (591)
T ss_pred             HHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcc
Confidence            455566899999999999999999999999999874  456667999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.......   ..+-+.+..                                         ......++...+++++
T Consensus       383 ~sPFr~~KeKv---k~eEvdrr~-----------------------------------------~~~~~ey~~kFS~eak  418 (591)
T KOG0986|consen  383 HSPFRQRKEKV---KREEVDRRT-----------------------------------------LEDPEEYSDKFSEEAK  418 (591)
T ss_pred             cCchhhhhhhh---hHHHHHHHH-----------------------------------------hcchhhcccccCHHHH
Confidence            99997543211   111111110                                         0011123466677889


Q ss_pred             HHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      ++.+.+|+.||++|..     +.++.+||||++
T Consensus       419 slc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  419 SLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             HHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence            9999999999999984     789999999985

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.94  E-value=1.9e-27  Score=186.83  Aligned_cols=164  Identities=15%  Similarity=0.123  Sum_probs=119.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|+.++.+...+.+..+...+.  +.  ..+|..+++|+|+|+.||+++.++.+||+|||+++...   ......+|++.
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  161 (325)
T cd05604          82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPE  161 (325)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChh
Confidence            3555565555555555543221  22  23677778999999999999999999999999987542   22334579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||++++|++|..||...+      ..+....+...  .                     
T Consensus       162 y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~~~~~--~---------------------  212 (325)
T cd05604         162 YLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD------VAEMYDNILHK--P---------------------  212 (325)
T ss_pred             hCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC------HHHHHHHHHcC--C---------------------
Confidence            999999999889999999999999999999999997533      22222222110  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH----HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA----ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~----~e~l~hp~f~~  214 (214)
                                         ....+..+..+.+++++||+.+|.+||++    .+++.||||+.
T Consensus       213 -------------------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         213 -------------------LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             -------------------ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence                               00112234566799999999999999986    58999999973

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=1.2e-27  Score=187.34  Aligned_cols=164  Identities=18%  Similarity=0.186  Sum_probs=119.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~   75 (214)
                      +|++++.+...+...+++....  +.  ..+|..+++|+|++++||+++.++.+||+|||++......   .....|++.
T Consensus        84 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~  163 (318)
T cd05582          84 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE  163 (318)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChh
Confidence            4556665555554444433211  11  2366777899999999999999999999999998765332   334578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||.+.+..++.++||||+||+++++++|..||...+      ..+.+..+.+..                       
T Consensus       164 y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i~~~~-----------------------  214 (318)
T cd05582         164 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMILKAK-----------------------  214 (318)
T ss_pred             hcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC------HHHHHHHHHcCC-----------------------
Confidence            999999998889999999999999999999999997433      233332222100                       


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+|+++||+.||++|||     +.++++||||++
T Consensus       215 -------------------~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         215 -------------------LGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence                               0122334556789999999999999999     677999999963

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.94  E-value=1.4e-26  Score=180.51  Aligned_cols=168  Identities=19%  Similarity=0.301  Sum_probs=119.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      +|.+.++|+|++++||++..++.+||+|||.+......       .....++..|+|||.+.+. .++.++|+||+|+++
T Consensus       135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l  214 (310)
T cd07865         135 IHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIM  214 (310)
T ss_pred             HHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHH
Confidence            66777799999999999999999999999999766432       1234677889999998775 478899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|.++|.+.+      ...++..+.+..|.++..+.........+ ....    .+......    ..... .+..
T Consensus       215 ~el~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~----~~~~l-~~~~  278 (310)
T cd07865         215 AEMWTRSPIMQGNT------EQHQLTLISQLCGSITPEVWPGVDKLELF-KKME----LPQGQKRK----VKERL-KPYV  278 (310)
T ss_pred             HHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhcccccchhhh-hhcc----CCCccchh----hHHhc-cccc
Confidence            99999999997544      45666677777777776654433221111 0000    00000000    00000 1112


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+..+.+||.+||+.||.+|||++++|+||||
T Consensus       279 ~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         279 KDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             CCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            34466899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.94  E-value=7.5e-27  Score=179.95  Aligned_cols=166  Identities=25%  Similarity=0.375  Sum_probs=117.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|..+++|+|++++||+++.++.++|+|||++......   .....+++.|+|||.+.+. .++.++|+||+||+++++
T Consensus       116 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l  195 (285)
T cd07861         116 FCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEM  195 (285)
T ss_pred             HHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHH
Confidence            356677799999999999999999999999999766432   2334678899999998765 478899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|.+||.+..      ....+..+.+..+.+.............+..      ..+.........       .....+.
T Consensus       196 ~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~  256 (285)
T cd07861         196 ATKKPLFHGDS------EIDQLFRIFRILGTPTEDVWPGVTSLPDYKN------TFPKWKKGSLRS-------AVKNLDE  256 (285)
T ss_pred             HHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhcchhhHHHHh------hccccCcchhHH-------hcCCCCH
Confidence            99999997544      4455555666666554443322111111100      000000000000       0123456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ++.+||++||+.||++|||+.+++.||||
T Consensus       257 ~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         257 DGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            77899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0580|consensus

Probab=99.94  E-value=6.4e-27  Score=168.17  Aligned_cols=138  Identities=17%  Similarity=0.346  Sum_probs=117.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceec-cCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV-DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .||...++|||+||+|+|+...+.+||+|||-+-.- .....+.+||..|.+||...+..++..+|+|++|+.++|++.|
T Consensus       139 y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg  218 (281)
T KOG0580|consen  139 YCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVG  218 (281)
T ss_pred             HhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhc
Confidence            488888899999999999999999999999988655 3445667999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      .+||...+      ..+...+|.+.                                          ....|...+.++.
T Consensus       219 ~ppFes~~------~~etYkrI~k~------------------------------------------~~~~p~~is~~a~  250 (281)
T KOG0580|consen  219 LPPFESQS------HSETYKRIRKV------------------------------------------DLKFPSTISGGAA  250 (281)
T ss_pred             CCchhhhh------hHHHHHHHHHc------------------------------------------cccCCcccChhHH
Confidence            99997544      34555555432                                          1224566777889


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      |+|.+||..+|.+|.+..|++.|||..
T Consensus       251 dlI~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  251 DLISRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             HHHHHHhccCccccccHHHHhhhHHHH
Confidence            999999999999999999999999964

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=8e-27  Score=185.26  Aligned_cols=143  Identities=19%  Similarity=0.241  Sum_probs=105.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~   99 (214)
                      .+|.+.++|+|+|+.||+++.++.+||+|||+++.....   ....+|+..|+|||++...     ..+.++||||+||+
T Consensus       183 ~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvi  262 (353)
T PLN00034        183 YLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS  262 (353)
T ss_pred             HHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHH
Confidence            366677899999999999999999999999999876432   3455899999999998532     24568999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|+.||.....   .........+.  .+..+                                       ..+.
T Consensus       263 l~el~~g~~pf~~~~~---~~~~~~~~~~~--~~~~~---------------------------------------~~~~  298 (353)
T PLN00034        263 ILEFYLGRFPFGVGRQ---GDWASLMCAIC--MSQPP---------------------------------------EAPA  298 (353)
T ss_pred             HHHHHhCCCCCCCCCC---ccHHHHHHHHh--ccCCC---------------------------------------CCCC
Confidence            9999999999963221   00111111110  00000                                       0123


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+.++.+||.+||+.||++|||+.|+|+||||..
T Consensus       299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        299 TASREFRHFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence            34567889999999999999999999999999963

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.94  E-value=1.8e-27  Score=187.26  Aligned_cols=142  Identities=17%  Similarity=0.280  Sum_probs=106.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHh------cCCCCcchhhHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLI------NAGYDCSADIWSVA   97 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~------~~~~~~~~Diws~G   97 (214)
                      .+|...++|+|++|+||+++.++.+||+|||++......    .....||+.|+|||++.      +..++.++||||+|
T Consensus       117 ~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  196 (330)
T cd05601         117 SVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLG  196 (330)
T ss_pred             HHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeeccc
Confidence            366777899999999999999999999999999876432    22347899999999997      34578899999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      |+++++++|..||...+      ....+..+.......                      .                +..
T Consensus       197 ~il~el~~g~~Pf~~~~------~~~~~~~i~~~~~~~----------------------~----------------~~~  232 (330)
T cd05601         197 VIAYEMIYGRSPFHEGT------SAKTYNNIMNFQRFL----------------------K----------------FPE  232 (330)
T ss_pred             ceeeeeccCCCCCCCCC------HHHHHHHHHcCCCcc----------------------C----------------CCC
Confidence            99999999999997533      223333222110000                      0                001


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ....+..+.+|+.+||+ +|++|+|++++++||||+.
T Consensus       233 ~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         233 DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            12245567899999998 9999999999999999973

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=1.7e-26  Score=178.72  Aligned_cols=169  Identities=20%  Similarity=0.272  Sum_probs=118.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|++++||+++.++.++|+|||+++.....   .....+++.|+|||.+.+. .++.++|+||+||++++++
T Consensus       119 lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~  198 (291)
T cd07870         119 IHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEML  198 (291)
T ss_pred             HHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHH
Confidence            56667799999999999999999999999998765332   2334678899999999865 5888999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.....     ..+++..+....|.+.............+....     .+...+..... ....    ...+..
T Consensus       199 ~g~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~----~~~~~~  263 (291)
T cd07870         199 QGQPAFPGVSD-----VFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW-----FLPCKPQQLRV-VWKR----LSRPPK  263 (291)
T ss_pred             hCCCCCCCchh-----HHHHHHHHHHHcCCCChhhhhhhhhcccccchh-----ccccCCcchhh-hccc----cCCChH
Confidence            99999975332     456777777777766655433222211111000     00000000000 0000    112456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+++.+||+.||++|||++|++.||||
T Consensus       264 ~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         264 AEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             HHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            7899999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.94  E-value=1.6e-26  Score=182.02  Aligned_cols=168  Identities=23%  Similarity=0.360  Sum_probs=122.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      +|...++|+|++|+||+++.++.++|+|||.++.....       .....|++.|+|||.+.+. .++.++|+||+||++
T Consensus       121 LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l  200 (332)
T cd07857         121 IHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL  200 (332)
T ss_pred             HHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH
Confidence            56677799999999999999999999999999865421       1234788999999998774 689999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|.+||...+      ....+..+...+|.++................    .............       ....
T Consensus       201 ~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~  263 (332)
T cd07857         201 AELLGRKPVFKGKD------YVDQLNQILQVLGTPDEETLSRIGSPKAQNYI----RSLPNIPKKPFES-------IFPN  263 (332)
T ss_pred             HHHHhCCcCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHH----HhccccCCcchHh-------hCCC
Confidence            99999999997544      46778888888888777654332221110000    0000000000000       0122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+..+.+|+.+||+.||++|||++++++||||+
T Consensus       264 ~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~  296 (332)
T cd07857         264 ANPLALDLLEKLLAFDPTKRISVEEALEHPYLA  296 (332)
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence            355778999999999999999999999999996

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.5e-26  Score=183.00  Aligned_cols=170  Identities=27%  Similarity=0.396  Sum_probs=124.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|..+++|+|++++|+++..++.++|+|||.+...........++..|+|||.+.+. .++.++|+||+||+++++++|
T Consensus       133 ~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg  212 (343)
T cd07851         133 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  212 (343)
T ss_pred             HHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhC
Confidence            3566677999999999999999999999999998776655566788899999999764 578899999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+      ....+..+....+.+++.+.........-    ......+.... ......      ....+..+.
T Consensus       213 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~------~~~~s~~l~  275 (343)
T cd07851         213 KTLFPGSD------HIDQLKRIMNLVGTPDEELLQKISSESAR----NYIQSLPQMPK-KDFKEV------FSGANPLAI  275 (343)
T ss_pred             CCCCCCCC------hHHHHHHHHHhcCCCCHHHHhhccchhHH----HHHHhccccCC-CCHHHH------hccCCHHHH
Confidence            99997544      46677777777777776655433211000    00000000000 000000      112356788


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +|+.+||+.||.+|||+.++++||||++
T Consensus       276 dli~~~l~~~P~~Rpt~~ell~h~~~~~  303 (343)
T cd07851         276 DLLEKMLVLDPDKRITAAEALAHPYLAE  303 (343)
T ss_pred             HHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence            9999999999999999999999999974

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=4e-26  Score=175.62  Aligned_cols=164  Identities=26%  Similarity=0.418  Sum_probs=119.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|+++.||+++. +.+||+|||.+.....  ......++..|+|||.+.+. .++.++|+||+||+++++++
T Consensus       116 LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~  194 (282)
T cd07831         116 MHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS  194 (282)
T ss_pred             HHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHc
Confidence            56667799999999999998 9999999999986643  23345688899999988654 46889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |.+||.+.+      ..+.+..+....|.++..+.........     .. ...+.........       .....+..+
T Consensus       195 ~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~-------~~~~~~~~~  255 (282)
T cd07831         195 LFPLFPGTN------ELDQIAKIHDVLGTPDAEVLKKFRKSRH-----MN-YNFPSKKGTGLRK-------LLPNASAEG  255 (282)
T ss_pred             CCcCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhccccc-----cc-ccCcccccccHHH-------HcccccHHH
Confidence            999997654      4666777777777777765322111100     00 0001100000000       012346788


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+++.+||.++|++|||++++++||||
T Consensus       256 ~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         256 LDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHHHHHhccCcccccCHHHHhhCCCC
Confidence            999999999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=4.6e-27  Score=187.66  Aligned_cols=143  Identities=19%  Similarity=0.252  Sum_probs=108.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcC----CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA----GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~----~~~~~~Diws~G~~   99 (214)
                      .+|.+.++|+|+||+||+++.++.+||+|||++......    ....+||+.|+|||++.+.    .++.++|+||+||+
T Consensus       157 ~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi  236 (370)
T cd05596         157 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  236 (370)
T ss_pred             HHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH
Confidence            367777899999999999999999999999999876432    2345799999999999764    37889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||...+      .......+......+.                                      +....
T Consensus       237 lyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~--------------------------------------~~~~~  272 (370)
T cd05596         237 LYEMLVGDTPFYADS------LVGTYSKIMDHKNSLT--------------------------------------FPDDI  272 (370)
T ss_pred             HHHHHhCCCCcCCCC------HHHHHHHHHcCCCcCC--------------------------------------CCCcC
Confidence            999999999997543      2222232221100000                                      00012


Q ss_pred             hhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                      ..+.++.+|+.+||+.+|.+  |+|++++++||||++
T Consensus       273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             CCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence            34567789999999999988  999999999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.7e-27  Score=187.65  Aligned_cols=167  Identities=14%  Similarity=0.236  Sum_probs=114.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------   66 (214)
                      +|.+++.....+....++..+.  +.  ..+|...++|+|+||+||+++.++.+||+|||+++.....            
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~  166 (377)
T cd05629          87 DLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQG  166 (377)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccc
Confidence            4555555544443333322111  12  2367777899999999999999999999999998632110            


Q ss_pred             --------------------------------------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCC
Q psy16751         67 --------------------------------------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDY  108 (214)
Q Consensus        67 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~  108 (214)
                                                            ....+||+.|+|||++.+..++.++||||+||+++++++|.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~  246 (377)
T cd05629         167 KSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWP  246 (377)
T ss_pred             cccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCC
Confidence                                                  012469999999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHH
Q psy16751        109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF  188 (214)
Q Consensus       109 ~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  188 (214)
                      ||...+      ..+.+..+........                      .                ......+.++.+|
T Consensus       247 Pf~~~~------~~~~~~~i~~~~~~~~----------------------~----------------p~~~~~s~~~~dl  282 (377)
T cd05629         247 PFCSEN------SHETYRKIINWRETLY----------------------F----------------PDDIHLSVEAEDL  282 (377)
T ss_pred             CCCCCC------HHHHHHHHHccCCccC----------------------C----------------CCCCCCCHHHHHH
Confidence            997533      2333333321100000                      0                0011234567899


Q ss_pred             HHHccccCCCCC---CCHHHHhcCCCCCC
Q psy16751        189 LRPMLAYDPKLR---ATAADCLQHPWLQN  214 (214)
Q Consensus       189 l~~~l~~dp~~R---~t~~e~l~hp~f~~  214 (214)
                      +.+||+ +|.+|   +|+.|+++||||++
T Consensus       283 i~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         283 IRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             HHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            999998 77775   59999999999973

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.94  E-value=4.5e-27  Score=187.15  Aligned_cols=167  Identities=13%  Similarity=0.218  Sum_probs=116.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--h--hhcccccccccccccccccccCCCcceEEeecCCceeccCC------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--I--RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~--~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------   66 (214)
                      +|.+++.+...+....++..+.  +  -+.+|..+++|+|+||+||+++.++.++|+|||++......            
T Consensus        87 ~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~  166 (360)
T cd05627          87 DMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHN  166 (360)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccC
Confidence            4556666555555444433111  1  12367777899999999999999999999999998644211            


Q ss_pred             --------------------------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCC
Q psy16751         67 --------------------------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTR  120 (214)
Q Consensus        67 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~  120 (214)
                                                ....+||+.|+|||++.+.+++.++|+||+||++++|++|..||...+      
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~------  240 (360)
T cd05627         167 PPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------  240 (360)
T ss_pred             CcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC------
Confidence                                      113479999999999999999999999999999999999999997533      


Q ss_pred             cHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCC
Q psy16751        121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLR  200 (214)
Q Consensus       121 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R  200 (214)
                      .......+.......                                      .+......+.++.+|+.+|+ .||.+|
T Consensus       241 ~~~~~~~i~~~~~~~--------------------------------------~~p~~~~~s~~~~~li~~l~-~~p~~R  281 (360)
T cd05627         241 PQETYRKVMNWKETL--------------------------------------VFPPEVPISEKAKDLILRFC-TDSENR  281 (360)
T ss_pred             HHHHHHHHHcCCCce--------------------------------------ecCCCCCCCHHHHHHHHHhc-cChhhc
Confidence            222222222100000                                      00001123456789999976 499999


Q ss_pred             CC---HHHHhcCCCCCC
Q psy16751        201 AT---AADCLQHPWLQN  214 (214)
Q Consensus       201 ~t---~~e~l~hp~f~~  214 (214)
                      ++   +.++++||||++
T Consensus       282 ~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         282 IGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             CCCCCHHHHhcCCCCCC
Confidence            84   899999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.94  E-value=2.9e-27  Score=189.31  Aligned_cols=167  Identities=16%  Similarity=0.213  Sum_probs=115.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC-------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------------   65 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------------   65 (214)
                      +|.+++.....+....++..+.  +.  ..+|.+.++|+|+||+||+++.++.+||+|||+|.....             
T Consensus        87 ~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~  166 (376)
T cd05598          87 DMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHH  166 (376)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccc
Confidence            4566665555444444332211  12  236777789999999999999999999999999753210             


Q ss_pred             ---------------------------------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCC
Q psy16751         66 ---------------------------------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP  112 (214)
Q Consensus        66 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~  112 (214)
                                                       .....+||+.|+|||++.+..++.++||||+||++++|++|..||..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  246 (376)
T cd05598         167 RQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  246 (376)
T ss_pred             ccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCC
Confidence                                             01124799999999999998999999999999999999999999975


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHc
Q psy16751        113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM  192 (214)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  192 (214)
                      .+      ..+....+.......                                      ........+..+.+|+.+|
T Consensus       247 ~~------~~~~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~~li~~l  282 (376)
T cd05598         247 DT------PAETQLKVINWETTL--------------------------------------HIPSQAKLSREASDLILRL  282 (376)
T ss_pred             CC------HHHHHHHHhccCccc--------------------------------------cCCCCCCCCHHHHHHHHHH
Confidence            33      222222221100000                                      0000122345668999997


Q ss_pred             cccCCCCCC---CHHHHhcCCCCCC
Q psy16751        193 LAYDPKLRA---TAADCLQHPWLQN  214 (214)
Q Consensus       193 l~~dp~~R~---t~~e~l~hp~f~~  214 (214)
                      + .+|.+|+   |+.++++||||+.
T Consensus       283 ~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         283 C-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             h-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            6 5999999   9999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=6.2e-27  Score=192.99  Aligned_cols=138  Identities=18%  Similarity=0.248  Sum_probs=108.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+||+||+++.++.+||+|||+++.....     ....+||+.|+|||++.+..++.++||||+||+++++
T Consensus       159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeL  238 (496)
T PTZ00283        159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYEL  238 (496)
T ss_pred             HHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            56667799999999999999999999999999865422     2345799999999999998999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      ..+.+..+..  +..+                                       ..+...+.
T Consensus       239 ltG~~Pf~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~  271 (496)
T PTZ00283        239 LTLKRPFDGEN------MEEVMHKTLA--GRYD---------------------------------------PLPPSISP  271 (496)
T ss_pred             HHCCCCCCCCC------HHHHHHHHhc--CCCC---------------------------------------CCCCCCCH
Confidence            99999997433      1222222111  1000                                       01234456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ++.+++.+||+.||.+|||+.++++|||++
T Consensus       272 ~l~~li~~~L~~dP~~RPs~~ell~~p~~~  301 (496)
T PTZ00283        272 EMQEIVTALLSSDPKRRPSSSKLLNMPICK  301 (496)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHhCHHHH
Confidence            788999999999999999999999999875

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.94  E-value=6.4e-27  Score=183.56  Aligned_cols=163  Identities=13%  Similarity=0.095  Sum_probs=116.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|+.++.....+....+.....  +.  ..+|...++|+|+||+||+++.++.+||+|||+++....   .....+|++.
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  161 (321)
T cd05603          82 ELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPE  161 (321)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcc
Confidence            3444554444444444433111  22  235667779999999999999999999999999875422   2334578999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||.+.+      .......+..   .+                    
T Consensus       162 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~---~~--------------------  212 (321)
T cd05603         162 YLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNILH---KP--------------------  212 (321)
T ss_pred             cCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC------HHHHHHHHhc---CC--------------------
Confidence            999999998889999999999999999999999997533      1222221111   00                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH----HHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA----ADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~----~e~l~hp~f~  213 (214)
                                         ...+...+..+.+++.+||+.||++|+++    .++++|+||.
T Consensus       213 -------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~  255 (321)
T cd05603         213 -------------------LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS  255 (321)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcC
Confidence                               01223344567899999999999999975    5999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.6e-26  Score=181.81  Aligned_cols=168  Identities=29%  Similarity=0.393  Sum_probs=124.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      .+|.+.++|+|+++.||+++.++.++|+|||.+......      .....++..|+|||.+.+. .++.++|+||+|+++
T Consensus       118 ~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il  197 (330)
T cd07834         118 YLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF  197 (330)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence            467777799999999999999999999999999876433      2345678899999999988 789999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc--cccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS--SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      +++++|.+||.+.+      ..+.+..+....|.++..........  ..+...      .+.........       ..
T Consensus       198 ~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------~~  258 (330)
T cd07834         198 AELLTRKPLFPGRD------YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKS------LPKKPKKPLSK-------LF  258 (330)
T ss_pred             HHHHcCCCCcCCCC------HHHHHHHHHHhcCCCChhHhhhccccchhhHHhh------cccCCcchhHH-------hc
Confidence            99999999998655      56777778888887776544321111  000000      00000001000       11


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +..+..+.+|+.+||+++|++|||++++++||||++
T Consensus       259 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         259 PGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence            234567889999999999999999999999999963

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=2.1e-26  Score=181.82  Aligned_cols=166  Identities=26%  Similarity=0.363  Sum_probs=119.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+..+|+|++++||+++.++.+||+|||++......   .....++..|+|||.+.+. .++.++|+||+||++++++
T Consensus       124 LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  203 (337)
T cd07858         124 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL  203 (337)
T ss_pred             HHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence            66667799999999999999999999999999866432   2344678899999998864 5889999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc--cccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS--SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +|.+||.+.+      ....+..+.+..|.++..........  ..+.      ...+.........       ..+..+
T Consensus       204 ~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~  264 (337)
T cd07858         204 GRKPLFPGKD------YVHQLKLITELLGSPSEEDLGFIRNEKARRYI------RSLPYTPRQSFAR-------LFPHAN  264 (337)
T ss_pred             cCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcCchhhhHHH------HhcCcccccCHHH-------HcccCC
Confidence            9999997544      45666667777777665443211111  0000      0001000000000       113456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.+|+++||+.+|++|||++++++||||+
T Consensus       265 ~~~~~li~~~l~~~P~~Rps~~ell~h~~~~  295 (337)
T cd07858         265 PLAIDLLEKMLVFDPSKRITVEEALAHPYLA  295 (337)
T ss_pred             HHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence            6788999999999999999999999999996

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=4.7e-26  Score=176.69  Aligned_cols=166  Identities=24%  Similarity=0.360  Sum_probs=119.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|++++||+++.++.++|+|||++......   .....+++.|+|||.+.+. .++.++|+||+||++++++
T Consensus       118 lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~  197 (298)
T cd07841         118 LHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELL  197 (298)
T ss_pred             HHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            56667799999999999999999999999999876532   2334667889999998764 5788999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.++|...+      ..+.+.++.+..+.+.............+....       .........       .....+..
T Consensus       198 ~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-------~~~~~~~~  257 (298)
T cd07841         198 LRVPFLPGDS------DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFK-------PFPPTPLKQ-------IFPAASDD  257 (298)
T ss_pred             cCCccccCCc------cHHHHHHHHHHcCCCchhhhhhccccccccccc-------ccCCcchhh-------hcccccHH
Confidence            9988886543      455666666666665554433222221111000       000000000       11234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||++||++|||++|+|+||||++
T Consensus       258 ~~~li~~~l~~~P~~R~s~~e~l~~~~~~~  287 (298)
T cd07841         258 ALDLLQRLLTLNPNKRITARQALEHPYFSN  287 (298)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence            789999999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=181.77  Aligned_cols=170  Identities=24%  Similarity=0.347  Sum_probs=119.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      .+|.++++|+|++++||+++.++.++|+|||++......      .....|++.|+|||.+.+. .++.++|+||+||++
T Consensus       121 ~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil  200 (336)
T cd07849         121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL  200 (336)
T ss_pred             HHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH
Confidence            367777899999999999999999999999998766422      1234788899999998764 588999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|++||...+      ...++..+...++.++.+...........    ......+.........       ..+.
T Consensus       201 ~el~~G~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~  263 (336)
T cd07849         201 AEMLSNRPLFPGKD------YLHQLNLILGVLGTPSQEDLNCIISLRAR----NYIKSLPFKPKVPWNK-------LFPN  263 (336)
T ss_pred             HHHHhCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHHhhchhhh----hHHhhcCcCCcccHHH-------Hhcc
Confidence            99999999997543      45666677777776655443221111000    0000000000000000       0122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+.+|+.+||+.+|++|||+.|+++||||+.
T Consensus       264 ~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~  297 (336)
T cd07849         264 ADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ  297 (336)
T ss_pred             cCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence            3556789999999999999999999999999974

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.94  E-value=3.1e-26  Score=180.62  Aligned_cols=170  Identities=24%  Similarity=0.377  Sum_probs=123.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~   99 (214)
                      .+|.+.++|+|++++||+++.++.+||+|||.+......       .....|+..|+|||.+.+. .++.++|+||+||+
T Consensus       122 ~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~  201 (334)
T cd07855         122 YIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI  201 (334)
T ss_pred             HHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHH
Confidence            366677799999999999999999999999999766321       1234788899999998764 58899999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|.+||...+      ...++..+....|.++............. ..   ....+.........       ..+
T Consensus       202 l~el~~g~~pf~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~-------~~~  264 (334)
T cd07855         202 FAEMLGRRQLFPGKN------YVHQLKLILSVLGSPSEEVLNRIGSDRVR-KY---IQNLPRKQPVPWSK-------IFP  264 (334)
T ss_pred             HHHHHcCCCccCCCC------hHHHHHHHHHHhCCChhHhhhhhchhhHH-HH---HhhcccCCCCCHHH-------Hcc
Confidence            999999999997544      46677778888888877765432211100 00   00001111111000       012


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+..+.+++.+||+.+|++|||++++++||||++
T Consensus       265 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         265 KASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence            34567899999999999999999999999999963

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=3.3e-26  Score=178.86  Aligned_cols=179  Identities=23%  Similarity=0.314  Sum_probs=120.4

Q ss_pred             ccccccccccccccccccCC----CcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcC-CCCcchhhHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP----PFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINA-GYDCSADIWSVA   97 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~----~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G   97 (214)
                      +|...++|+|++++||+++.    ++.+||+|||++.......      ....++..|+|||.+.+. .++.++|+||+|
T Consensus       124 lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  203 (316)
T cd07842         124 LHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG  203 (316)
T ss_pred             HHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHH
Confidence            56666799999999999999    9999999999998764322      234678889999999875 588999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         98 CMAFELATGDYLFEPHAGDT---YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+++++++|.+||.+.....   .......+..+...++.+.............+...... ..........    ....
T Consensus       204 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~  278 (316)
T cd07842         204 CIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKD-FKTKTYPSNS----LAKW  278 (316)
T ss_pred             HHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhh-ccCCCCCCcc----HHHH
Confidence            99999999999997654322   11123455666667776655444332222222110000 0000000000    0011


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .......+..+.+++.+||++||++|||+.|+++||||
T Consensus       279 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         279 MEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            11112455678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0589|consensus

Probab=99.94  E-value=4.5e-27  Score=184.81  Aligned_cols=138  Identities=20%  Similarity=0.286  Sum_probs=115.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      -+|.+.++|||+|+.||....++.|+|+|||+|+..+..   ..+.+||+.|++||++.+.+|+.++||||+||+++|++
T Consensus       121 ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~  200 (426)
T KOG0589|consen  121 YLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMC  200 (426)
T ss_pred             HHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHH
Confidence            367777799999999999999999999999999998654   56679999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +-+++|...+      -...+.++.+....                                         +.+...+.+
T Consensus       201 ~lk~aF~a~~------m~~Li~ki~~~~~~-----------------------------------------Plp~~ys~e  233 (426)
T KOG0589|consen  201 TLKPAFKASN------MSELILKINRGLYS-----------------------------------------PLPSMYSSE  233 (426)
T ss_pred             hcccccCccc------hHHHHHHHhhccCC-----------------------------------------CCCccccHH
Confidence            9999998655      23334444443211                                         134455678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ++.++..||..+|..||+|.++|.+|..
T Consensus       234 l~~lv~~~l~~~P~~RPsa~~LL~~P~l  261 (426)
T KOG0589|consen  234 LRSLVKSMLRKNPEHRPSALELLRRPHL  261 (426)
T ss_pred             HHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence            8999999999999999999999999864

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=6.9e-26  Score=175.43  Aligned_cols=167  Identities=26%  Similarity=0.362  Sum_probs=120.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++++||+++.++.++|+|||.+......   .....+++.|+|||.+.+.. ++.++|+||+|+++++++
T Consensus       122 LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~  201 (293)
T cd07843         122 LHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL  201 (293)
T ss_pred             HHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHH
Confidence            56677799999999999999999999999999877543   33446788899999998754 688999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh-hHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE-SAR  183 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  183 (214)
                      +|.++|...+      ....+.++....+.+....+............  .   ....    .......  ..+.. .+.
T Consensus       202 ~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~----~~~~~~~--~~~~~~~~~  264 (293)
T cd07843         202 TKKPLFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK--T---FTKY----PYNQLRK--KFPALSLSD  264 (293)
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhccchhccc--c---cccc----cchhhhc--cccccCCCh
Confidence            9999998654      45666777777776665544322211111000  0   0000    0000000  11122 456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.+++++||+.+|++|||++|+|+||||
T Consensus       265 ~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         265 NGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            77899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=4.1e-26  Score=176.46  Aligned_cols=169  Identities=25%  Similarity=0.397  Sum_probs=117.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++++||+++.++.++|+|||+++.....   .....++..|+|||.+.+. .++.++|+||+||++++++
T Consensus       119 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~  198 (291)
T cd07844         119 CHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMA  198 (291)
T ss_pred             HHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHH
Confidence            56666799999999999999999999999998765322   2233567889999999874 5889999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..+|.....     ..+++..+.+.++.+.............+.....     ............    . .-.....
T Consensus       199 ~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~-~~~~~~~  263 (291)
T cd07844         199 TGRPLFPGSTD-----VEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSF-----PFYPPRPLINHA----P-RLDRIPH  263 (291)
T ss_pred             hCCCCCCCCcc-----HHHHHHHHHHhcCCCChhhhhhhhhccccccccc-----cccCChhHHHhC----c-CCCCchh
Confidence            99999964331     3566666777777766554433322211111100     000000000000    0 0011246


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+++.+||+++|++|||+.++++||||
T Consensus       264 ~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         264 GEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             HHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            6899999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0574|consensus

Probab=99.94  E-value=5.3e-28  Score=179.67  Aligned_cols=136  Identities=22%  Similarity=0.318  Sum_probs=108.7

Q ss_pred             cccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      .+|||+|..|||+...|..|++|||.|....+.   ....+|||.|||||++..-+|+..+||||+|++..||..|++|+
T Consensus       150 KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPY  229 (502)
T KOG0574|consen  150 KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPY  229 (502)
T ss_pred             HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCc
Confidence            389999999999999999999999999877543   45669999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHH
Q psy16751        111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR  190 (214)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  190 (214)
                      ..-      ..+..+.+|-   -.||+.                                    +..|...+.++-||++
T Consensus       230 sDI------HPMRAIFMIP---T~PPPT------------------------------------F~KPE~WS~~F~DFi~  264 (502)
T KOG0574|consen  230 SDI------HPMRAIFMIP---TKPPPT------------------------------------FKKPEEWSSEFNDFIR  264 (502)
T ss_pred             ccc------cccceeEecc---CCCCCC------------------------------------CCChHhhhhHHHHHHH
Confidence            621      1122221110   011111                                    1234556778899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCC
Q psy16751        191 PMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       191 ~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +||..+|++|.||.++++|||.++
T Consensus       265 ~CLiK~PE~R~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  265 SCLIKKPEERKTALRLCEHTFIKN  288 (502)
T ss_pred             HHhcCCHHHHHHHHHHhhhhhhcC
Confidence            999999999999999999999875

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.94  E-value=1.1e-26  Score=185.36  Aligned_cols=143  Identities=21%  Similarity=0.277  Sum_probs=106.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCC----CCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAG----YDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~----~~~~~Diws~G~~   99 (214)
                      .+|...++|+|+||+||+++.++.+||+|||+|......    ....+||+.|+|||++.+.+    ++.++|+||+||+
T Consensus       157 ~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i  236 (370)
T cd05621         157 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  236 (370)
T ss_pred             HHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence            367777899999999999999999999999999876432    23557999999999998653    7889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +++|++|..||.+.+      .......+......+.                                      +....
T Consensus       237 lyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~--------------------------------------~p~~~  272 (370)
T cd05621         237 LFEMLVGDTPFYADS------LVGTYSKIMDHKNSLN--------------------------------------FPEDV  272 (370)
T ss_pred             HHHHHhCCCCCCCCC------HHHHHHHHHhCCcccC--------------------------------------CCCcc
Confidence            999999999997543      2333333322100000                                      00011


Q ss_pred             hhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                      ..+..+.+++.+||+.++.+  |+|++|+++||||++
T Consensus       273 ~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         273 EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             cCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence            23456789999999865543  889999999999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=5.6e-26  Score=174.79  Aligned_cols=167  Identities=26%  Similarity=0.392  Sum_probs=122.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.+.++|+|+++.||+++.++.++|+|||.+......   .....++..|+|||.+.+. .++.++|+||+|++++++
T Consensus       113 ~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l  192 (283)
T cd05118         113 FCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAEL  192 (283)
T ss_pred             HHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHH
Confidence            367777899999999999999999999999999877543   2334678889999999887 688999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|+.+|...+      ..+.+..+.+.++.+.................     ..+.........       ..+..+.
T Consensus       193 ~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~~  254 (283)
T cd05118         193 LSRRPLFPGKS------EIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF-----SFPKKAGMPLPK-------LFPNASP  254 (283)
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHcCCCchHhcccchhhhhhhhh-----hhccccccCHHH-------hhhhhCH
Confidence            99999997544      56777777777777655544333221111000     000000101000       1134567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.+|+.+||++||.+||++.+++.||||
T Consensus       255 ~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         255 QALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            88999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=9.6e-26  Score=173.99  Aligned_cols=169  Identities=25%  Similarity=0.403  Sum_probs=123.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|+++.||+++.++.++|+|||.+......    ....+++..|+|||++.+. .++.++|+||+|+++++
T Consensus       115 ~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~  194 (288)
T cd07833         115 YCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAE  194 (288)
T ss_pred             HHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHH
Confidence            356777799999999999999999999999998876432    3345778899999999988 78899999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|.++|.+.+      ..+.+..+....+..+............+..     ...+....   ....  ....+...+
T Consensus       195 l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~~--~~~~~~~~~  258 (288)
T cd07833         195 LLDGEPLFPGDS------DIDQLYLIQKCLGPLPPSHQELFSSNPRFAG-----VAFPEPSQ---PESL--ERRYPGKVS  258 (288)
T ss_pred             HHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHhhhcccCccccc-----cccCCCCC---cHHH--HHhcCCccc
Confidence            999999997544      4566777777777766654433221111100     00000000   0001  111233446


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .++.+|+++||..+|++|||++++++||||
T Consensus       259 ~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         259 SPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             hHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=3.1e-26  Score=177.43  Aligned_cols=165  Identities=27%  Similarity=0.449  Sum_probs=117.3

Q ss_pred             ccccccccccccccccccCC-CcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++++||+++. ++.+||+|||.+......   .....+++.|+|||.+.+. .++.++|+||+|++++++
T Consensus       126 LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l  205 (295)
T cd07837         126 CHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEM  205 (295)
T ss_pred             HHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHH
Confidence            56677799999999999998 899999999999865432   2233678889999999764 578999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      ....+..+.+..+.++...............       .+...+.....       ..+..+.
T Consensus       206 ~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-------~~~~~~~  265 (295)
T cd07837         206 SRKQPLFPGDS------ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE-------FPQWKPQDLSR-------AVPDLSP  265 (295)
T ss_pred             HcCCCCCCCCC------HHHHHHHHHHHhCCCChhhCcchhhccchhh-------cCcccchhHHH-------hccccCH
Confidence            99999997644      5666666666666655443322111111000       00000000000       0123456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+.+||.+||++||.+|||++|+|+||||+
T Consensus       266 ~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         266 EGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            778999999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=1.3e-25  Score=173.01  Aligned_cols=167  Identities=26%  Similarity=0.408  Sum_probs=115.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|+++.||++++++.++|+|||++......   .....++..|+|||.+.+. .++.++|+||+||++++++
T Consensus       116 LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~  195 (286)
T cd07847         116 CHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELL  195 (286)
T ss_pred             HHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHH
Confidence            55566799999999999999999999999999876443   2234678899999999874 5788999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.+||.+.+      ..+.+..+.+..+............. .++....    .+.........   .   ..+..+..
T Consensus       196 ~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~---~---~~~~~~~~  258 (286)
T cd07847         196 TGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQIFSTN-QFFKGLS----IPEPETREPLE---S---KFPNISSP  258 (286)
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcccc-ccccccc----CCCcccccCHH---H---HhccCCHH
Confidence            9999997544      45556666666555443222111110 1111000    00000000000   0   01223567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+|+.+||+.+|++|||+.|++.||||
T Consensus       259 ~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         259 ALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             HHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            7899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=5.6e-26  Score=173.82  Aligned_cols=167  Identities=21%  Similarity=0.327  Sum_probs=118.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc-ceEEeecCCceeccCCCCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDKHFTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~y~   77 (214)
                      +|.+++.....+....+...+.  +.  ..+|...++|+|++++|+++..++ .++|+|||.+....... ...++..|+
T Consensus        95 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~y~  173 (267)
T PHA03390         95 DLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS-CYDGTLDYF  173 (267)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-cCCCCCccc
Confidence            4566665554544444433211  22  236666779999999999999888 99999999987665432 346788999


Q ss_pred             chHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccc
Q psy16751         78 SLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELR  157 (214)
Q Consensus        78 aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  157 (214)
                      |||++.+..++.++|+||+|++++++++|..||......     .-...........                       
T Consensus       174 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~-----------------------  225 (267)
T PHA03390        174 SPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-----ELDLESLLKRQQK-----------------------  225 (267)
T ss_pred             ChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-----hhhHHHHHHhhcc-----------------------
Confidence            999999888999999999999999999999999743211     0001111110000                       


Q ss_pred             cCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-HHHHhcCCCCCC
Q psy16751        158 HIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-AADCLQHPWLQN  214 (214)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-~~e~l~hp~f~~  214 (214)
                                      .....+..+..+.+||.+||+.+|.+|++ ++++|+||||++
T Consensus       226 ----------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        226 ----------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             ----------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence                            00012234567789999999999999996 699999999985

>KOG0610|consensus

Probab=99.93  E-value=1.8e-26  Score=177.30  Aligned_cols=140  Identities=19%  Similarity=0.281  Sum_probs=114.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC-----------------------------------C-------
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----------------------------------H-------   66 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----------------------------------~-------   66 (214)
                      +|.-.+++||+||+|||+.++|.+.|.||-++.....                                   .       
T Consensus       195 LHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~  274 (459)
T KOG0610|consen  195 LHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDE  274 (459)
T ss_pred             HHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccc
Confidence            6777779999999999999999999999998653310                                   0       


Q ss_pred             -----------------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHH
Q psy16751         67 -----------------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII  129 (214)
Q Consensus        67 -----------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~  129 (214)
                                       ....+||-+|.|||++.|.+.+.++|.|+|||++|||+.|..||.+.+      +.+.+.+++
T Consensus       275 ~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~------~~~Tl~NIv  348 (459)
T KOG0610|consen  275 SASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSN------NKETLRNIV  348 (459)
T ss_pred             cccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCC------chhhHHHHh
Confidence                             012379999999999999999999999999999999999999999877      567777765


Q ss_pred             HHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC----HHH
Q psy16751        130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT----AAD  205 (214)
Q Consensus       130 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~e  205 (214)
                      ..--.+|                                        -.+..+..++|||+++|.+||++|..    |.|
T Consensus       349 ~~~l~Fp----------------------------------------~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e  388 (459)
T KOG0610|consen  349 GQPLKFP----------------------------------------EEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE  388 (459)
T ss_pred             cCCCcCC----------------------------------------CCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence            3211111                                        12345678899999999999999998    999


Q ss_pred             HhcCCCCCC
Q psy16751        206 CLQHPWLQN  214 (214)
Q Consensus       206 ~l~hp~f~~  214 (214)
                      +.+||||+.
T Consensus       389 IK~HpFF~g  397 (459)
T KOG0610|consen  389 IKRHPFFEG  397 (459)
T ss_pred             hhcCccccC
Confidence            999999974

>PHA02988 hypothetical protein; Provisional

Probab=99.93  E-value=4.4e-26  Score=175.84  Aligned_cols=130  Identities=15%  Similarity=0.165  Sum_probs=101.9

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc--CCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN--AGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      ..+|+|++++|++++.++.+||+|||+++.........+|+..|+|||++.+  ..++.++||||+||+++++++|..||
T Consensus       143 ~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf  222 (283)
T PHA02988        143 NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPF  222 (283)
T ss_pred             CCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCC
Confidence            4479999999999999999999999999877665556688999999999987  57999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHH
Q psy16751        111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR  190 (214)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  190 (214)
                      ...+      ..+....+......+                                        ..+..++..+.+|+.
T Consensus       223 ~~~~------~~~~~~~i~~~~~~~----------------------------------------~~~~~~~~~l~~li~  256 (283)
T PHA02988        223 ENLT------TKEIYDLIINKNNSL----------------------------------------KLPLDCPLEIKCIVE  256 (283)
T ss_pred             CCCC------HHHHHHHHHhcCCCC----------------------------------------CCCCcCcHHHHHHHH
Confidence            7433      222222221110000                                        112234567889999


Q ss_pred             HccccCCCCCCCHHHHhc
Q psy16751        191 PMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       191 ~~l~~dp~~R~t~~e~l~  208 (214)
                      +||+.||++|||++++++
T Consensus       257 ~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        257 ACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHhcCCcccCcCHHHHHH
Confidence            999999999999999985

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.93  E-value=3.5e-26  Score=190.47  Aligned_cols=158  Identities=14%  Similarity=0.073  Sum_probs=104.5

Q ss_pred             ccccccccccccccccccCC-CcceEEeecCCceeccC----CCCCCCcCCcccchHHHhcCC-----------------
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDK----HFTEDVQTRQYRSLEVLINAG-----------------   86 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~----~~~~~~~~~~y~aPE~~~~~~-----------------   86 (214)
                      +|...++|||+||+||+++. ++.+||+|||+|+....    .....++++.|+|||.+....                 
T Consensus       271 LH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~  350 (566)
T PLN03225        271 LHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV  350 (566)
T ss_pred             HHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccch
Confidence            66677899999999999985 68999999999986532    234558899999999775432                 


Q ss_pred             -----CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCC
Q psy16751         87 -----YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPG  161 (214)
Q Consensus        87 -----~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (214)
                           ++.++||||+||+++||+++..++.  +      +..++.......+.....+.......               
T Consensus       351 l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~------~~~~~~~~l~~~~~~~~~~~~~~~~~---------------  407 (566)
T PLN03225        351 LWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--S------NLIQFNRQLKRNDYDLVAWRKLVEPR---------------  407 (566)
T ss_pred             hccccCCCCcccHHHHHHHHHHHhCcCCCc--h------HHHHHHHHHHhcCCcHHHHHHhhccc---------------
Confidence                 3345699999999999998655432  1      34444444444333222221111000               


Q ss_pred             CCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        162 LKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                       ..    ......+...+.......+||.+||++||++|||++|+|+||||++
T Consensus       408 -~~----~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~  455 (566)
T PLN03225        408 -AS----PDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDR  455 (566)
T ss_pred             -cc----hhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCC
Confidence             00    0000001111222345569999999999999999999999999974

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.4e-26  Score=177.41  Aligned_cols=142  Identities=18%  Similarity=0.266  Sum_probs=108.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|.+.++|+|++++||+++.++.++|+|||++......  ....+|++.|+|||++.+..++.++|+||+||+++++++|
T Consensus       118 lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g  197 (285)
T cd05605         118 LHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG  197 (285)
T ss_pred             HHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC
Confidence            66677799999999999999999999999999876432  2345789999999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.+.+.      ......+.......+                                      ...+...+..+.
T Consensus       198 ~~pf~~~~~------~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~  233 (285)
T cd05605         198 KSPFRQRKE------KVKREEVERRVKEDQ--------------------------------------EEYSEKFSEAAR  233 (285)
T ss_pred             CCCCCCCch------hhHHHHHHHHhhhcc--------------------------------------cccCcccCHHHH
Confidence            999975331      111111111100000                                      001223455678


Q ss_pred             HHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                      +|+.+||..||++||     +++++++||||+.
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         234 SICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            999999999999999     8999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.93  E-value=2.8e-26  Score=174.38  Aligned_cols=169  Identities=22%  Similarity=0.372  Sum_probs=119.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~   75 (214)
                      +|.+++.....+....+...++  ++  ..+|.++++|+|++|.||+++.++.++|+|||.+...   ........++..
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~  163 (260)
T PF00069_consen   84 SLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPE  163 (260)
T ss_dssp             BHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4555555445554444433221  22  2366777899999999999999999999999999753   233455688999


Q ss_pred             ccchHHHh-cCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         76 YRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        76 y~aPE~~~-~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      |+|||.+. +..++.++|+||+|++++++++|..||....      .......+.+........                
T Consensus       164 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~----------------  221 (260)
T PF00069_consen  164 YMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN------SDDQLEIIEKILKRPLPS----------------  221 (260)
T ss_dssp             GSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS------HHHHHHHHHHHHHTHHHH----------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccc------chhhhhhhhhcccccccc----------------
Confidence            99999998 6778999999999999999999999997532      223333333322111000                


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                                         ...........+.+++.+||+.||++|||++++++||||
T Consensus       222 -------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  222 -------------------SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             -------------------HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             -------------------cccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence                               000011123678899999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.93  E-value=5.2e-26  Score=175.09  Aligned_cols=167  Identities=20%  Similarity=0.260  Sum_probs=118.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~   77 (214)
                      +|.+++...+.+....+.....  +.  ..+|...++|+|++++||+++.++.++++|||++...... .....|+..|+
T Consensus        83 ~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~  162 (279)
T cd05633          83 DLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM  162 (279)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCcc
Confidence            4555555555555555543211  22  2366677799999999999999999999999999765432 23347899999


Q ss_pred             chHHHhc-CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         78 SLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        78 aPE~~~~-~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      |||.+.+ ..++.++|+||+||+++++++|..||......    ....+.....   ..                     
T Consensus       163 aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~---~~---------------------  214 (279)
T cd05633         163 APEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHEIDRMTL---TV---------------------  214 (279)
T ss_pred             CHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc----CHHHHHHHhh---cC---------------------
Confidence            9999874 46889999999999999999999999643211    1111111100   00                     


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                       ....+...+..+.+++.+||+.||++|+     |++++++||||+.
T Consensus       215 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         215 -----------------NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             -----------------CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence                             0012234456778999999999999999     6999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.93  E-value=2e-26  Score=177.90  Aligned_cols=142  Identities=18%  Similarity=0.322  Sum_probs=107.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|++++|++++.++.++|+|||++.....  ......|+..|+|||++.+..++.++|+||+||+++++++|
T Consensus       118 lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g  197 (285)
T cd05630         118 LHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG  197 (285)
T ss_pred             HHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhC
Confidence            5667779999999999999999999999999876532  22345789999999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.......   ...........   .+.                                      ..+...+..+.
T Consensus       198 ~~Pf~~~~~~~---~~~~~~~~~~~---~~~--------------------------------------~~~~~~~~~~~  233 (285)
T cd05630         198 QSPFQQRKKKI---KREEVERLVKE---VQE--------------------------------------EYSEKFSPDAR  233 (285)
T ss_pred             CCCCCCCCccc---hHHHHHhhhhh---hhh--------------------------------------hcCccCCHHHH
Confidence            99997432100   11111111100   000                                      01123445678


Q ss_pred             HHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      +|+.+||+.||++|+|     ++|+++||||+.
T Consensus       234 ~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            9999999999999999     999999999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=1.7e-26  Score=190.03  Aligned_cols=138  Identities=20%  Similarity=0.345  Sum_probs=108.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+||.||+++.++.+||+|||+++.....     ....+||+.|+|||++.+..++.++||||+||+++++
T Consensus       185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  264 (478)
T PTZ00267        185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL  264 (478)
T ss_pred             HHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHH
Confidence            66677899999999999999999999999999876432     2344799999999999988899999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||...+      ..+.+..+..  +..+                                       ..+...+.
T Consensus       265 ~tg~~Pf~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~s~  297 (478)
T PTZ00267        265 LTLHRPFKGPS------QREIMQQVLY--GKYD---------------------------------------PFPCPVSS  297 (478)
T ss_pred             HhCCCCCCCCC------HHHHHHHHHh--CCCC---------------------------------------CCCccCCH
Confidence            99999997433      2222222211  1100                                       01123345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ++.+||.+||+.||++|||+++++.|||++
T Consensus       298 ~~~~li~~~L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        298 GMKALLDPLLSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence            678999999999999999999999999874

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.93  E-value=1e-25  Score=175.62  Aligned_cols=166  Identities=23%  Similarity=0.274  Sum_probs=117.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC--------------CCCCcCCcccchHHHhcC-CCCcchhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF--------------TEDVQTRQYRSLEVLINA-GYDCSADI   93 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~--------------~~~~~~~~y~aPE~~~~~-~~~~~~Di   93 (214)
                      +|...++|+|++++||+++.++.++|+|||++.......              ....+++.|+|||.+.+. .++.++|+
T Consensus       131 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  210 (311)
T cd07866         131 LHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDI  210 (311)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHh
Confidence            566777999999999999999999999999997653221              123567889999998765 58899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         94 WSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        94 ws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||+||+++++++|.++|.+.+      .......+....+.+++................     .....+.....    
T Consensus       211 ~slG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----  275 (311)
T cd07866         211 WGIGCVFAEMFTRRPILQGKS------DIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVH-----SFTNYPRTLEE----  275 (311)
T ss_pred             HHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhchhhhhcccccccc-----cCCCCCccHHH----
Confidence            999999999999999997544      466677777777766554333222211110000     00000001000    


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .   .......+.+|+.+||+.||++|||+.|++.||||
T Consensus       276 ~---~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         276 R---FGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             H---cccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            0   01223567899999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=5.5e-26  Score=179.95  Aligned_cols=168  Identities=24%  Similarity=0.343  Sum_probs=122.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|...++|+|++++||++..++.++|+|||+++..........++..|+|||.+.+. .++.++|+||+||+++++++|.
T Consensus       136 LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~  215 (345)
T cd07877         136 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  215 (345)
T ss_pred             HHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC
Confidence            666777999999999999999999999999998776655566888999999999874 6888999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc-cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE-FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      .||...+      ....+..+.+..+.++............ .+.     ...+.........       .....+..+.
T Consensus       216 ~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~~~~~~~~~  277 (345)
T cd07877         216 TLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESARNYI-----QSLTQMPKMNFAN-------VFIGANPLAV  277 (345)
T ss_pred             CCCCCCC------HHHHHHHHHHHhCCCCHHHHhhcccHhHHHHH-----HHhcccCCcchhh-------hcCCCCHHHH
Confidence            9996433      4566677777777766655433221100 000     0000000000000       0012355678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +||.+||+.||.+|+|+.++++||||++
T Consensus       278 ~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         278 DLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             HHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence            9999999999999999999999999973

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.93  E-value=2.9e-26  Score=178.82  Aligned_cols=196  Identities=19%  Similarity=0.229  Sum_probs=118.4

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhhhc--ccc-cccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIRNA--CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~~~--~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y   76 (214)
                      +|.+++.+...+....++...  .++.+  +|. +.++|+|+++.|++++.++.++|+|||++..... ......|+..|
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  164 (308)
T cd06615          85 SLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY  164 (308)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCc
Confidence            455666555444433332211  12333  332 3568999999999999999999999999876533 23445788999


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      +|||.+.+..++.++|+||+||+++++++|..||...+       .....   ..++............ ...     ..
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~-------~~~~~---~~~~~~~~~~~~~~~~-~~~-----~~  228 (308)
T cd06615         165 MSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-------AKELE---AMFGRPVSEGEAKESH-RPV-----SG  228 (308)
T ss_pred             cChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc-------hhhHH---HhhcCccccccccCCc-ccc-----cC
Confidence            99999988889999999999999999999999986432       11111   1112111110000000 000     00


Q ss_pred             ccCCCCCCCchhh---HHHhh---cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYS---VLVEK---YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .............   .....   .......+.++.+|+.+||..+|++|||++++++||||++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence            0000000000000   00000   0001124567899999999999999999999999999964

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=2.2e-26  Score=176.90  Aligned_cols=144  Identities=16%  Similarity=0.210  Sum_probs=106.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|..+++|+|++|+||+++.++.++|+|||++......  .....|+..|+|||++.+..++.++|+||+||+++++++
T Consensus       110 ~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~  189 (277)
T cd05607         110 HLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA  189 (277)
T ss_pred             HHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHh
Confidence            356677799999999999999999999999998766432  234578899999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.......  ...........  +..+                         .              .....+.++
T Consensus       190 g~~p~~~~~~~~--~~~~~~~~~~~--~~~~-------------------------~--------------~~~~~~~~~  226 (277)
T cd05607         190 GRTPFKDHKEKV--AKEELKRRTLE--DEVK-------------------------F--------------EHQNFTEES  226 (277)
T ss_pred             CCCCCCCCcchh--hHHHHHHHhhc--cccc-------------------------c--------------ccccCCHHH
Confidence            999996432100  00111111000  0000                         0              001234567


Q ss_pred             HHHHHHccccCCCCCCCH----HHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATA----ADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~----~e~l~hp~f~~  214 (214)
                      .+|+.+||+.||.+|||+    ++++.||||+.
T Consensus       227 ~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         227 KDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             HHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence            899999999999999999    67889999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.93  E-value=1.1e-25  Score=173.36  Aligned_cols=166  Identities=24%  Similarity=0.397  Sum_probs=119.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.+..+|+|++++|++++.++.++|+|||.+......   .....++..|+|||++.+. .++.++|+||+|++++++
T Consensus       114 ~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l  193 (283)
T cd07835         114 YCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEM  193 (283)
T ss_pred             HHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHH
Confidence            356667799999999999999999999999999765432   2334668889999998775 478899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|.+||...+      ....+..+.+..+.+....+........+...      .+........       ......+.
T Consensus       194 ~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~~  254 (283)
T cd07835         194 VNRRPLFPGDS------EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT------FPKWARQDLS-------KVVPNLDE  254 (283)
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhhhhhchhhhhh------cccccccchh-------hhcCCCCH
Confidence            99999997544      45666677777777766544322221111000      0000000000       01123445


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.+++.+||+.+|++|||++|+++||||
T Consensus       255 ~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         255 DGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            77899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=8.4e-26  Score=172.14  Aligned_cols=138  Identities=18%  Similarity=0.239  Sum_probs=105.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|...++|+|++++||+++.++.++|+|||.+.......      ....++..|+|||.+.+..++.++|+||+|+++++
T Consensus       120 lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  199 (263)
T cd06625         120 LHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVE  199 (263)
T ss_pred             HHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHH
Confidence            566667999999999999999999999999987653211      23467889999999999889999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|+.||...+      .......+...  ...                                      ...+...+
T Consensus       200 l~~g~~p~~~~~------~~~~~~~~~~~--~~~--------------------------------------~~~~~~~~  233 (263)
T cd06625         200 MLTEKPPWAEFE------AMAAIFKIATQ--PTN--------------------------------------PQLPSHVS  233 (263)
T ss_pred             HHhCCCCccccc------hHHHHHHHhcc--CCC--------------------------------------CCCCccCC
Confidence            999999996322      11111111110  000                                      00123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..+.+++.+||..+|.+|||+.++++||||
T Consensus       234 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         234 PDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            567899999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0690|consensus

Probab=99.93  E-value=2.8e-26  Score=172.05  Aligned_cols=139  Identities=18%  Similarity=0.229  Sum_probs=116.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|..+++.||+|-+|.+++.+|.+||+|||+++..   +...+..+|||.|.|||++....|+.++|.|.+||++|||+
T Consensus       283 YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm  362 (516)
T KOG0690|consen  283 YLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM  362 (516)
T ss_pred             hhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHH
Confidence            478888999999999999999999999999999754   45667789999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|+.||...+      .......|+                                          ......|...+++
T Consensus       363 CGRLPFyn~d------h~kLFeLIl------------------------------------------~ed~kFPr~ls~e  394 (516)
T KOG0690|consen  363 CGRLPFYNKD------HEKLFELIL------------------------------------------MEDLKFPRTLSPE  394 (516)
T ss_pred             hccCcccccc------hhHHHHHHH------------------------------------------hhhccCCccCCHH
Confidence            9999998543      222222221                                          1122356677788


Q ss_pred             HHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      ++.|+..+|..||.+|..     |.|+++|+||.+
T Consensus       395 AktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~  429 (516)
T KOG0690|consen  395 AKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFAS  429 (516)
T ss_pred             HHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence            899999999999999985     889999999974

>KOG0584|consensus

Probab=99.93  E-value=3.1e-26  Score=183.85  Aligned_cols=165  Identities=15%  Similarity=0.248  Sum_probs=127.3

Q ss_pred             cchhhhhccCchhhhhHHH--HHHhhhccccccc----ccccccccccccCC-CcceEEeecCCceeccC-CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKR--RLYIRNACWVDKH----FTEDVQTRQYRSLP-PFLFDIGTYRNACWVDK-HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~--~~~~~~~~~~~~~----~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~-~~~~~~~~~   74 (214)
                      +|..|..+.+++--+-+|.  ...+..+.+.|..    +|||+|..||.+.. .|.|||+|+|+|..... ..+..+|||
T Consensus       129 tLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTP  208 (632)
T KOG0584|consen  129 TLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTP  208 (632)
T ss_pred             cHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCc
Confidence            3566777777766665554  3445555455544    89999999999976 59999999999998864 456679999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .+||||+.. ..|+..+||||||++++||+++..||..+.      +.-|+.+.+. .|..|.-+               
T Consensus       209 EFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~------n~AQIYKKV~-SGiKP~sl---------------  265 (632)
T KOG0584|consen  209 EFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT------NPAQIYKKVT-SGIKPAAL---------------  265 (632)
T ss_pred             cccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC------CHHHHHHHHH-cCCCHHHh---------------
Confidence            999999998 689999999999999999999999998776      3444444321 23333221               


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             .....+++++||.+||.. .++|+|+.|+|+||||+.
T Consensus       266 -----------------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  266 -----------------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             -----------------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence                                   123356788999999999 999999999999999973

>KOG4279|consensus

Probab=99.93  E-value=5.1e-27  Score=190.72  Aligned_cols=140  Identities=25%  Similarity=0.311  Sum_probs=111.0

Q ss_pred             ccccccccccccccccccCC-CcceEEeecCCceecc--CC-CCCCCcCCcccchHHHhcC--CCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVD--KH-FTEDVQTRQYRSLEVLINA--GYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~--~~-~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~l~~  102 (214)
                      +|.+.++|||+|..|+|+.. .|.+||.|||-++..-  .+ ..+..||..|||||++-.+  +|+.++||||+||++.|
T Consensus       691 LHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vE  770 (1226)
T KOG4279|consen  691 LHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVE  770 (1226)
T ss_pred             hhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEe
Confidence            67777899999999999866 7999999999998773  23 3456899999999999876  69999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      |.+|++||..-..       .|-+ |.+ .|..                                    ....++|.+.+
T Consensus       771 MATGrPPF~Elgs-------pqAA-MFk-VGmy------------------------------------KvHP~iPeels  805 (1226)
T KOG4279|consen  771 MATGRPPFVELGS-------PQAA-MFK-VGMY------------------------------------KVHPPIPEELS  805 (1226)
T ss_pred             eccCCCCeeecCC-------hhHh-hhh-hcce------------------------------------ecCCCCcHHHH
Confidence            9999999973221       1111 111 1110                                    11223567788


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+++.||.+|+.++|.+||+|.++|++||++
T Consensus       806 aeak~FilrcFepd~~~R~sA~~LL~DpFlq  836 (1226)
T KOG4279|consen  806 AEAKNFILRCFEPDPCDRPSAKDLLQDPFLQ  836 (1226)
T ss_pred             HHHHHHHHHHcCCCcccCccHHHhccCcccc
Confidence            8999999999999999999999999999986

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.93  E-value=5.4e-26  Score=174.92  Aligned_cols=148  Identities=17%  Similarity=0.242  Sum_probs=108.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|...++|+|+++.|++++.++.++|+|||++...... ....+|+..|+|||.+.+..++.++|+||+||+++++++|
T Consensus       110 ~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g  189 (279)
T cd06619         110 YLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG  189 (279)
T ss_pred             HHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhC
Confidence            356667799999999999999999999999999866433 3445889999999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.............   ...+.......                      +.              ......+.++.
T Consensus       190 ~~pf~~~~~~~~~~~~~---~~~~~~~~~~~----------------------~~--------------~~~~~~~~~~~  230 (279)
T cd06619         190 RFPYPQIQKNQGSLMPL---QLLQCIVDEDP----------------------PV--------------LPVGQFSEKFV  230 (279)
T ss_pred             CCCchhhcccccccchH---HHHHHHhccCC----------------------CC--------------CCCCcCCHHHH
Confidence            99996422110000000   00000000000                      00              00112345678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +++.+||+.+|++||+++++++||||++
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~~~~~~  258 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDHPFIVQ  258 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcCccccc
Confidence            9999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.93  E-value=4.5e-26  Score=179.57  Aligned_cols=144  Identities=15%  Similarity=0.217  Sum_probs=104.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhc-----CCCCcchhhHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVAC   98 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~   98 (214)
                      .+|...++|+|+||+||+++.++.+||+|||++......    ....+||+.|+|||++.+     ..++.++|+||+||
T Consensus       117 ~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGv  196 (332)
T cd05623         117 SVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGV  196 (332)
T ss_pred             HHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHH
Confidence            467777899999999999999999999999998765321    223579999999999973     35788999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751         99 MAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      +++++++|..||...+      ..+....+...-...+                      .+               ...
T Consensus       197 il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------~p---------------~~~  233 (332)
T cd05623         197 CMYEMLYGETPFYAES------LVETYGKIMNHKERFQ----------------------FP---------------AQV  233 (332)
T ss_pred             HHHHHhcCCCCCCCCC------HHHHHHHHhCCCcccc----------------------CC---------------Ccc
Confidence            9999999999997433      2233332221000000                      00               001


Q ss_pred             hhhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        179 PESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                      ...+.++.+|+++||+.+++.  |+|++++++||||++
T Consensus       234 ~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         234 TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            234567789999999765554  689999999999973

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=1.7e-25  Score=176.40  Aligned_cols=166  Identities=25%  Similarity=0.363  Sum_probs=118.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC-----------------CCCCCCcCCcccchHHHhcC-CCCcc
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----------------HFTEDVQTRQYRSLEVLINA-GYDCS   90 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----------------~~~~~~~~~~y~aPE~~~~~-~~~~~   90 (214)
                      +|...++|+|+++.||++..++.++|+|||.+.....                 ......++..|+|||.+.+. .++.+
T Consensus       135 LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  214 (335)
T PTZ00024        135 LHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFA  214 (335)
T ss_pred             HHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcH
Confidence            5666779999999999999999999999999976541                 11123567789999999875 47889


Q ss_pred             hhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhH
Q psy16751         91 ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV  170 (214)
Q Consensus        91 ~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (214)
                      +|+||+||+++++++|.+||...+      ..+++..+....+.++............+..       .....+..... 
T Consensus       215 ~Dv~slG~~l~el~tg~~p~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-  280 (335)
T PTZ00024        215 VDMWSVGCIFAELLTGKPLFPGEN------EIDQLGRIFELLGTPNEDNWPQAKKLPLYTE-------FTPRKPKDLKT-  280 (335)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCchhhCcchhhcccccc-------cCcCCcccHHH-
Confidence            999999999999999999998654      5667777777777765543222111111100       00000000000 


Q ss_pred             HHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       171 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                            .....+..+.+++.+||+.+|++|||++|+|.||||++
T Consensus       281 ------~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~  318 (335)
T PTZ00024        281 ------IFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS  318 (335)
T ss_pred             ------hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence                  11234557789999999999999999999999999974

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=4.2e-25  Score=169.87  Aligned_cols=166  Identities=25%  Similarity=0.445  Sum_probs=121.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.+.++|+|+++.||+++.++.++|+|||.+......   .....++..|+|||.+.+. .++.++|+||+||+++++
T Consensus       113 ~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l  192 (282)
T cd07829         113 YCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEM  192 (282)
T ss_pred             HHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHH
Confidence            466677799999999999999999999999999866432   2334567789999999877 688999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|.++|...+      ....+..+.+.++.+.............+ ..  .   .+.........       ..+..+.
T Consensus       193 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~---~~~~~~~~~~~-------~~~~~~~  253 (282)
T cd07829         193 ITGKPLFPGDS------EIDQLFKIFQILGTPTEESWPGVTKLPDY-KP--T---FPKFPPKDLEK-------VLPRLDP  253 (282)
T ss_pred             HhCCCCCCCcc------HHHHHHHHHHHhCCCcHHHHHhhcccccc-cc--c---ccccCccchHH-------hcccccH
Confidence            99999997654      56777778888887766554433222200 00  0   00000000000       0112255


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.+++.+||+.||++|||+++++.||||
T Consensus       254 ~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         254 EGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            78999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=8.8e-26  Score=173.99  Aligned_cols=166  Identities=23%  Similarity=0.389  Sum_probs=118.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l  103 (214)
                      .+|...++|+|++++||+++.++.++|+|||++......   .....++..|+|||.+.+.. ++.++|+||+||+++++
T Consensus       115 ~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l  194 (284)
T cd07860         115 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM  194 (284)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHH
Confidence            356666799999999999999999999999998765432   23346778899999987754 68899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      +...+..+.+..+.++............+...      .+.........       .....+.
T Consensus       195 ~tg~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------~~~~~~~  255 (284)
T cd07860         195 VTRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS------FPKWARQDFSK-------VVPPLDE  255 (284)
T ss_pred             HHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh------cccccccCHHH-------HcccCCH
Confidence            99999997544      56677777777777665433221111110000      00000000000       0123445


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.++|.+||+.||++|||++++++||||
T Consensus       256 ~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         256 DGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            67899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.93  E-value=7.4e-26  Score=173.32  Aligned_cols=139  Identities=19%  Similarity=0.256  Sum_probs=103.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc-----CCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~   99 (214)
                      .+|.+.++|+|++++||+++.++.++|+|||++......   .....|+..|+|||++.+     ..++.++|+||+||+
T Consensus       126 ~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~  205 (272)
T cd06637         126 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT  205 (272)
T ss_pred             HHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHH
Confidence            366777899999999999999999999999999865432   234578889999999973     358889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||....      ..........   ...                       +.              ....
T Consensus       206 l~el~~g~~p~~~~~------~~~~~~~~~~---~~~-----------------------~~--------------~~~~  239 (272)
T cd06637         206 AIEMAEGAPPLCDMH------PMRALFLIPR---NPA-----------------------PR--------------LKSK  239 (272)
T ss_pred             HHHHHhCCCCccccC------HHHHHHHHhc---CCC-----------------------CC--------------CCCC
Confidence            999999999986322      1111111000   000                       00              0112


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..+.++.+|+.+||..||.+|||++++++||||
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         240 KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            234567899999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.2e-25  Score=177.82  Aligned_cols=169  Identities=27%  Similarity=0.404  Sum_probs=121.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|...++|+|++|+||++..++.++++|||.+...........+++.|+|||.+.+. .++.++|+||+||+++++++|.
T Consensus       134 LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~  213 (343)
T cd07880         134 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK  213 (343)
T ss_pred             HHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            566677999999999999999999999999998776655556788899999999874 5888999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||.+.+      ....+..+....+.++..+..........    ......+........       ......+..+.+
T Consensus       214 ~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  276 (343)
T cd07880         214 PLFKGHD------HLDQLMEIMKVTGTPSKEFVQKLQSEDAK----NYVKKLPRFRKKDFR-------SLLPNANPLAVN  276 (343)
T ss_pred             CCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhcchhHH----HHHHhccccCcchHH-------HhccCCChHHHH
Confidence            9997544      45566666666666655544332211000    000001111100000       012344567889


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.+||+.||++|||+.++++||||+.
T Consensus       277 li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         277 VLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhcCccHhh
Confidence            999999999999999999999999963

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0197|consensus

Probab=99.93  E-value=6.3e-26  Score=179.19  Aligned_cols=131  Identities=15%  Similarity=0.190  Sum_probs=103.1

Q ss_pred             cccccccccccccccccCCCcceEEeecCCceeccCCCC-CCCcC---CcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         30 WVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-EDVQT---RQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        30 ~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~---~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      ..++.+|||+..+|||++.+..|||+|||+|+...+..+ ...|.   .-|.|||.+....++.++|||||||+++|+++
T Consensus       320 es~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT  399 (468)
T KOG0197|consen  320 ESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFT  399 (468)
T ss_pred             HhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhc
Confidence            344458999999999999999999999999996654432 22332   34999999999999999999999999999998


Q ss_pred             -CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        106 -GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       106 -g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                       |+.|+.+.+      +.+.+..+.+-            .                             +.+.|..|+..
T Consensus       400 ~G~~py~~ms------n~ev~~~le~G------------y-----------------------------Rlp~P~~CP~~  432 (468)
T KOG0197|consen  400 YGRVPYPGMS------NEEVLELLERG------------Y-----------------------------RLPRPEGCPDE  432 (468)
T ss_pred             cCCCCCCCCC------HHHHHHHHhcc------------C-----------------------------cCCCCCCCCHH
Confidence             788887655      45555444321            0                             11245778889


Q ss_pred             HHHHHHHccccCCCCCCCHHHHh
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      +.++|..||..+|++|||++.+.
T Consensus       433 vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  433 VYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHHHHHhhCCcccCCCHHHHH
Confidence            99999999999999999998654

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.93  E-value=5.9e-26  Score=181.33  Aligned_cols=142  Identities=18%  Similarity=0.248  Sum_probs=105.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCC----CCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAG----YDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~----~~~~~Diws~G~~l  100 (214)
                      +|...++|+|+||+||+++.++.+||+|||+++.....    ....+||+.|+|||++.+.+    ++.++||||+||++
T Consensus       158 LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil  237 (371)
T cd05622         158 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL  237 (371)
T ss_pred             HHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHH
Confidence            66777799999999999999999999999999876432    23457999999999998653    78899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++|++|..||...+      .......+.......+                                      +.....
T Consensus       238 yell~G~~Pf~~~~------~~~~~~~i~~~~~~~~--------------------------------------~~~~~~  273 (371)
T cd05622         238 YEMLVGDTPFYADS------LVGTYSKIMNHKNSLT--------------------------------------FPDDND  273 (371)
T ss_pred             HHHHhCCCCCCCCC------HHHHHHHHHcCCCccc--------------------------------------CCCcCC
Confidence            99999999997533      2222222221100000                                      001123


Q ss_pred             hHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                      .+..+.+|+.+||+.++.+  |++++++++||||++
T Consensus       274 ~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         274 ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             CCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence            4557789999999844433  789999999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.93  E-value=1.9e-25  Score=172.84  Aligned_cols=164  Identities=17%  Similarity=0.251  Sum_probs=121.3

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhhh--cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.+...+....++...  .++.  .+|...++|+|++|.||+++.++.+||+|||++...........+++.|+|
T Consensus        87 ~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~a  166 (290)
T cd05580          87 ELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLA  166 (290)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccC
Confidence            455666565555544443321  1222  356677799999999999999999999999999877655555678999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||.+.+..++.++|+||+|++++++++|..||...+      .......+..  +.+                       
T Consensus       167 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~-----------------------  215 (290)
T cd05580         167 PEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKILE--GKV-----------------------  215 (290)
T ss_pred             hhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhc--CCc-----------------------
Confidence            999988888999999999999999999999996433      1222222211  100                       


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                       ..+...+..+.+++.+||+.||.+|+     +++|+++||||+.
T Consensus       216 -----------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         216 -----------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             -----------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence                             01223345678999999999999999     8999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.93  E-value=1.7e-25  Score=169.96  Aligned_cols=138  Identities=21%  Similarity=0.386  Sum_probs=107.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|..+++|+|++|+||+++.++.++|+|||++......   .....+++.|+|||++.+..++.++|+||+||++++++
T Consensus       117 ~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~  196 (257)
T cd08223         117 YLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMA  196 (257)
T ss_pred             HHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHH
Confidence            366777799999999999999999999999999866432   23446888999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+..  +..+                                       ..+...+..
T Consensus       197 ~g~~~~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  229 (257)
T cd08223         197 TLKHAFNAKD------MNSLVYRIIE--GKLP---------------------------------------PMPKDYSPE  229 (257)
T ss_pred             cCCCCCCCCC------HHHHHHHHHh--cCCC---------------------------------------CCccccCHH
Confidence            9999986432      1111111111  1110                                       011234457


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+|+.+||+.||.+|||+.++++||||
T Consensus       230 ~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         230 LGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            7899999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0611|consensus

Probab=99.93  E-value=3.6e-26  Score=175.88  Aligned_cols=161  Identities=20%  Similarity=0.369  Sum_probs=128.6

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhh-----cccccccccccccccccccCCCcceEEeecCCceecc--CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRN-----ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD--KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~-----~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~   75 (214)
                      +|+||+-..+.+.++... .+|-+.     .||-+.++|||+|-+|||++.++.+||+|||++..+.  ....+.+|++.
T Consensus       139 eLYDYiSer~~LsErEaR-hfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPL  217 (668)
T KOG0611|consen  139 ELYDYISERGSLSEREAR-HFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPL  217 (668)
T ss_pred             cHHHHHHHhccccHHHHH-HHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcc
Confidence            689999999999998884 344332     3888888999999999999999999999999998764  34677899999


Q ss_pred             ccchHHHhcCCCC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         76 YRSLEVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        76 y~aPE~~~~~~~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      |.+||++.|.+|. +.+|.||+||++|-+..|..||.+.+      ....+.+|.+  |.              |     
T Consensus       218 YASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D------hk~lvrQIs~--Ga--------------Y-----  270 (668)
T KOG0611|consen  218 YASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD------HKRLVRQISR--GA--------------Y-----  270 (668)
T ss_pred             cCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch------HHHHHHHhhc--cc--------------c-----
Confidence            9999999999985 79999999999999999999998654      2222222211  11              1     


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                            ..++-+.++.-||+.||..||++|.|..++-.|=|++
T Consensus       271 ----------------------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  271 ----------------------REPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             ----------------------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence                                  1122334556899999999999999999999998864

>KOG4645|consensus

Probab=99.93  E-value=1.8e-26  Score=197.48  Aligned_cols=140  Identities=24%  Similarity=0.319  Sum_probs=114.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-------CCCCcCCcccchHHHhcC---CCCcchhhHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-------TEDVQTRQYRSLEVLINA---GYDCSADIWSVA   97 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G   97 (214)
                      .+|.|+++|||+|+.||+++.+|.+|++|||.|.......       ...+||+.|||||++.|.   +...++||||+|
T Consensus      1349 ~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1349 YLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred             HHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence            4888889999999999999999999999999998875432       345899999999999975   467799999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      ||..||++|+.||...+      +.+++-..+.. |..|+                                       .
T Consensus      1429 CVVlEM~tGkrPW~~~d------ne~aIMy~V~~-gh~Pq---------------------------------------~ 1462 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELD------NEWAIMYHVAA-GHKPQ---------------------------------------I 1462 (1509)
T ss_pred             ceEEEeecCCCchhhcc------chhHHHhHHhc-cCCCC---------------------------------------C
Confidence            99999999999998555      44554433322 22221                                       2


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      |...+.+.+|||.+||+.||++|.++.|+|.|-|-+
T Consensus      1463 P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1463 PERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             chhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence            344677889999999999999999999999998754

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.93  E-value=2.3e-25  Score=169.98  Aligned_cols=139  Identities=21%  Similarity=0.287  Sum_probs=105.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      +|...++|+|++|.|++++.++.++|+|||.+.....         ......|+..|+|||.+.+..++.++|+||+||+
T Consensus       118 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~  197 (265)
T cd06631         118 LHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCT  197 (265)
T ss_pred             HHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHH
Confidence            5666679999999999999999999999999875421         1223468889999999998889999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||...+      .......+....+..+                                       ..+.
T Consensus       198 ~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~---------------------------------------~~~~  232 (265)
T cd06631         198 VFEMATGKPPLASMD------RLAAMFYIGAHRGLMP---------------------------------------RLPD  232 (265)
T ss_pred             HHHHHhCCCccccCC------hHHHHHHhhhccCCCC---------------------------------------CCCC
Confidence            999999999996432      1221111111101100                                       0112


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..+..+.+|+++||+.+|++|||+.++++||||
T Consensus       233 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         233 SFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            344567899999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.93  E-value=9.1e-26  Score=174.80  Aligned_cols=141  Identities=22%  Similarity=0.265  Sum_probs=106.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.++++|+|+++.|++++.++.++|+|||++......   .....|+..|+|||.+.+..++.++|+||+|+++++++
T Consensus       133 ~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~  212 (292)
T cd06658         133 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI  212 (292)
T ss_pred             HHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            366677799999999999999999999999998755322   23347888999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      ....+..+........                                       ......+..
T Consensus       213 ~g~~p~~~~~------~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~  247 (292)
T cd06658         213 DGEPPYFNEP------PLQAMRRIRDNLPPRV---------------------------------------KDSHKVSSV  247 (292)
T ss_pred             hCCCCCCCCC------HHHHHHHHHhcCCCcc---------------------------------------ccccccCHH
Confidence            9999986432      2222222211100000                                       001123346


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+++.+||+.||.+|||++++++||||+
T Consensus       248 ~~~li~~~l~~~P~~Rpt~~~il~~~~~~  276 (292)
T cd06658         248 LRGFLDLMLVREPSQRATAQELLQHPFLK  276 (292)
T ss_pred             HHHHHHHHccCChhHCcCHHHHhhChhhh
Confidence            67999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.93  E-value=1.9e-25  Score=172.00  Aligned_cols=141  Identities=18%  Similarity=0.224  Sum_probs=105.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHh-----cCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLI-----NAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~-----~~~~~~~~Diws~G~~   99 (214)
                      .+|...++|+|+++.|++++.++.++|+|||++......   .....++..|+|||++.     +..++.++|+||+||+
T Consensus       118 ~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi  197 (282)
T cd06643         118 YLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT  197 (282)
T ss_pred             HHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHH
Confidence            356677799999999999999999999999998765322   23346888999999985     2347789999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|.+||...+      ..+....+...  ..+.                                     ...+.
T Consensus       198 l~el~~g~~p~~~~~------~~~~~~~~~~~--~~~~-------------------------------------~~~~~  232 (282)
T cd06643         198 LIEMAQIEPPHHELN------PMRVLLKIAKS--EPPT-------------------------------------LAQPS  232 (282)
T ss_pred             HHHHccCCCCccccC------HHHHHHHHhhc--CCCC-------------------------------------CCCcc
Confidence            999999999986432      22222222111  0000                                     00112


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+..+.+|+.+||+.||.+|||++++++||||+
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  266 (282)
T cd06643         233 RWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT  266 (282)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEe
Confidence            2345678999999999999999999999999996

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4721|consensus

Probab=99.93  E-value=8.9e-27  Score=185.60  Aligned_cols=161  Identities=16%  Similarity=0.150  Sum_probs=126.1

Q ss_pred             cchhhhhccCchhhhhHHH----HHHhhhcccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKR----RLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~----~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y   76 (214)
                      .|+++|...+.++..-+.-    +.---|.+|.|.++|||+|+-|||+.-+..|||+|||-++...+.  .-..+||..|
T Consensus       198 qL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW  277 (904)
T KOG4721|consen  198 QLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW  277 (904)
T ss_pred             cHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence            4677888888876655422    111234688999999999999999999999999999999877654  3345899999


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      ||||++...+.+.++||||||||||||++|..||...+         +.+-|. -+|.-                     
T Consensus       278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd---------ssAIIw-GVGsN---------------------  326 (904)
T KOG4721|consen  278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD---------SSAIIW-GVGSN---------------------  326 (904)
T ss_pred             hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc---------hheeEE-eccCC---------------------
Confidence            99999999999999999999999999999999996322         111111 01110                     


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                                     .-...+|.+++..++=||+.||+-.|+.||++.++|+|
T Consensus       327 ---------------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  327 ---------------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             ---------------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence                           01234678889999999999999999999999999988

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.3e-25  Score=175.49  Aligned_cols=169  Identities=15%  Similarity=0.220  Sum_probs=113.6

Q ss_pred             cchhhhhcc-CchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcC
Q psy16751          3 SIFNFFVAF-GSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~-~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~   73 (214)
                      +|.+++... ..+....++..+.  +.  ..+|...++|+|+|+.||++..++.+||+|||++......    ....+||
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt  166 (331)
T cd05597          87 DLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGT  166 (331)
T ss_pred             cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceecc
Confidence            455555442 3344444433211  12  2367777899999999999999999999999998765432    1224689


Q ss_pred             CcccchHHHhc-----CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc
Q psy16751         74 RQYRSLEVLIN-----AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE  148 (214)
Q Consensus        74 ~~y~aPE~~~~-----~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  148 (214)
                      +.|+|||++.+     ..++.++||||+||+++++++|..||...+      ..+....+.......+            
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~------~~~~~~~i~~~~~~~~------------  228 (331)
T cd05597         167 PDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKEHFQ------------  228 (331)
T ss_pred             ccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC------HHHHHHHHHcCCCccc------------
Confidence            99999999974     247789999999999999999999997433      2222222221100000            


Q ss_pred             cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                                .+               ......+..+.+|+++||+.++++  |++++++++||||.+
T Consensus       229 ----------~~---------------~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         229 ----------FP---------------PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             ----------CC---------------CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence                      00               001124557789999999765544  789999999999963

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.92  E-value=1.7e-25  Score=172.63  Aligned_cols=142  Identities=19%  Similarity=0.283  Sum_probs=108.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|+++.|++++.++.++|+|||++.....  ......|+..|+|||.+.+..++.++|+||+||+++++++|
T Consensus       118 lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g  197 (285)
T cd05632         118 LHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEG  197 (285)
T ss_pred             HHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhC
Confidence            5667779999999999999999999999999876532  23345789999999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||....      +......+.........                                      ..+...+..+.
T Consensus       198 ~~P~~~~~------~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~  233 (285)
T cd05632         198 QSPFRGRK------EKVKREEVDRRVLETEE--------------------------------------VYSAKFSEEAK  233 (285)
T ss_pred             CCCCCCCC------HHHHHHHHHHhhhcccc--------------------------------------ccCccCCHHHH
Confidence            99997432      22222222211111000                                      01122344668


Q ss_pred             HHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      +|+.+||+.||++|||     +.++++|+||++
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05632         234 SICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRN  266 (285)
T ss_pred             HHHHHHccCCHhHcCCCcccChHHHHcChhhhc
Confidence            9999999999999999     889999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.92  E-value=3.2e-25  Score=170.61  Aligned_cols=166  Identities=20%  Similarity=0.254  Sum_probs=116.6

Q ss_pred             chhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcccc
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYRS   78 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~a   78 (214)
                      |..++.....+....++..+.  +.  ..+|...++|+|++++||+++.++.++|+|||.+..... ......|+..|+|
T Consensus        84 L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~a  163 (278)
T cd05606          84 LHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMA  163 (278)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcC
Confidence            344444444444445443221  11  236667779999999999999999999999999876543 2334578999999


Q ss_pred             hHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccc
Q psy16751         79 LEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELR  157 (214)
Q Consensus        79 PE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  157 (214)
                      ||.+.+. .++.++|+||+||+++++++|..||.......   . ........  ..                       
T Consensus       164 PE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~---~-~~~~~~~~--~~-----------------------  214 (278)
T cd05606         164 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---K-HEIDRMTL--TM-----------------------  214 (278)
T ss_pred             cHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc---h-HHHHHHhh--cc-----------------------
Confidence            9999855 58899999999999999999999997432100   1 11110000  00                       


Q ss_pred             cCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        158 HIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                      ....+...+..+.+++.+||..+|++|+     ++.++++||||+.
T Consensus       215 ----------------~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         215 ----------------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             ----------------CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence                            0012233456778999999999999999     9999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=1.1e-25  Score=173.84  Aligned_cols=140  Identities=20%  Similarity=0.319  Sum_probs=104.0

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcC---CCCcchhhHHHHHHHHHHhhCC
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINA---GYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      .++|+|++++||+++.++.++|+|||++......  .....|+..|+|||.+.+.   .++.++|+||+||+++++++|.
T Consensus       128 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~  207 (288)
T cd06616         128 KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK  207 (288)
T ss_pred             CeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC
Confidence            5789999999999999999999999998765322  2334688899999999876   5889999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||....        .....+.+.....+....                       .           ......+..+.+
T Consensus       208 ~p~~~~~--------~~~~~~~~~~~~~~~~~~-----------------------~-----------~~~~~~~~~l~~  245 (288)
T cd06616         208 FPYPKWN--------SVFDQLTQVVKGDPPILS-----------------------N-----------SEEREFSPSFVN  245 (288)
T ss_pred             CCchhcc--------hHHHHHhhhcCCCCCcCC-----------------------C-----------cCCCccCHHHHH
Confidence            9996422        111112221111110000                       0           001234557789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      |+.+||+.+|++|||++++++||||+.
T Consensus       246 li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         246 FINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             HHHHHccCChhhCcCHHHHhcChhhhc
Confidence            999999999999999999999999963

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.92  E-value=5.8e-25  Score=169.49  Aligned_cols=163  Identities=25%  Similarity=0.388  Sum_probs=116.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|....+|+|+++.|++++.++.++|+|||.+......  .....++..|+|||.+.+..++.++|+||+||+++++++|
T Consensus       123 LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~  202 (287)
T cd07838         123 LHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR  202 (287)
T ss_pred             HHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC
Confidence            56667799999999999999999999999999876433  2334678889999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      .++|...+      ..+.+.++.+..+.+............        ....+.........       ..+..+..+.
T Consensus       203 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-------~~~~~~~~~~  261 (287)
T cd07838         203 RPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVSLP--------RSSFPSYTPRSFKS-------FVPEICEEGL  261 (287)
T ss_pred             CCcccCCC------hHHHHHHHHHHcCCCChHhcCCCcccc--------hhhcccccccchhh-------hhhhhhHHHH
Confidence            99997544      456666666655443221111100000        00000000000000       1123456778


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +++++||+.||++|||++++++||||
T Consensus       262 ~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         262 DLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             HHHHHHhccCCccCCCHHHHhcCcCC
Confidence            99999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=4.8e-25  Score=168.38  Aligned_cols=137  Identities=21%  Similarity=0.274  Sum_probs=105.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      +|.++.+|+|++|+||+++.++.++|+|||.++.....         .....|+..|+|||.+.+..++.++|+||+||+
T Consensus       122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i  201 (267)
T cd06628         122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCL  201 (267)
T ss_pred             HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHH
Confidence            56667799999999999999999999999998866421         112357888999999998889999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||...+      ....+..+..  +..+                                       ..+.
T Consensus       202 l~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~  234 (267)
T cd06628         202 VVEMLTGKHPFPDCT------QLQAIFKIGE--NASP---------------------------------------EIPS  234 (267)
T ss_pred             HHHHhhCCCCCCCcc------HHHHHHHHhc--cCCC---------------------------------------cCCc
Confidence            999999999997432      1222211111  0000                                       0122


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..+..+.++|++||+.||.+|||+.++++||||
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         235 NISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            344567899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.1e-25  Score=171.09  Aligned_cols=139  Identities=22%  Similarity=0.288  Sum_probs=107.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++|++++.++.++|+|||++......   .....++..|+|||.+.+..++.++|+||+||+++++++
T Consensus       114 lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~t  193 (274)
T cd06609         114 LHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK  193 (274)
T ss_pred             HHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence            56666799999999999999999999999999877533   334578889999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh-hHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE-SARG  184 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  184 (214)
                      |..||...+      ....+..+...  .++.                                       .... .+..
T Consensus       194 g~~p~~~~~------~~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  226 (274)
T cd06609         194 GEPPLSDLH------PMRVLFLIPKN--NPPS---------------------------------------LEGNKFSKP  226 (274)
T ss_pred             CCCCcccCc------hHHHHHHhhhc--CCCC---------------------------------------CcccccCHH
Confidence            999996432      12211111110  0000                                       0011 3456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+++.+||..+|++|||++++++||||++
T Consensus       227 ~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~  256 (274)
T cd06609         227 FKDFVSLCLNKDPKERPSAKELLKHKFIKK  256 (274)
T ss_pred             HHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence            789999999999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=3.6e-25  Score=174.13  Aligned_cols=167  Identities=26%  Similarity=0.421  Sum_probs=123.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|...++|+|+++.|++++.++.++|+|||.+...........++..|+|||.+.+ ..++.++|+||+||+++++++|
T Consensus       123 ~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg  202 (328)
T cd07856         123 YVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG  202 (328)
T ss_pred             HHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhC
Confidence            366677799999999999999999999999999876555555678889999999876 4689999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc--ccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS--EFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      .++|....      .......+.+.+|.++.++........  .++.      ..+...+.....       ..+..+..
T Consensus       203 ~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~  263 (328)
T cd07856         203 KPLFPGKD------HVNQFSIITDLLGTPPDDVINTICSENTLRFVQ------SLPKREPVPFSE-------KFKNADPS  263 (328)
T ss_pred             CCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh------hccccCCCcHHH-------HcCCCCHH
Confidence            99997543      455566677788888877765332111  0000      000000101000       01234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+++++||+.+|++|||+++++.||||.
T Consensus       264 ~~~li~~~l~~~P~~R~t~~ell~~~~~~  292 (328)
T cd07856         264 AIDLLEKMLVFDPQKRISAAEALAHPYLA  292 (328)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCCccc
Confidence            88999999999999999999999999995

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.92  E-value=8.5e-26  Score=177.64  Aligned_cols=179  Identities=19%  Similarity=0.185  Sum_probs=107.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC----------CCCCCCcCCcccchHHHhcC--CCCcchhhHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----------HFTEDVQTRQYRSLEVLINA--GYDCSADIWS   95 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----------~~~~~~~~~~y~aPE~~~~~--~~~~~~Diws   95 (214)
                      .+|.+.++|+|+||.||+++.++.++++||+.+.....          ......++..|+|||++.+.  +++.++||||
T Consensus       116 ~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws  195 (327)
T cd08227         116 YIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS  195 (327)
T ss_pred             HHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHH
Confidence            36677779999999999999999999999987543321          11223567789999999863  5899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccc------ccccCccccCCCCCCCchhh
Q psy16751         96 VACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEF------FTKKGELRHIPGLKPWDLYS  169 (214)
Q Consensus        96 ~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  169 (214)
                      +||+++++++|..||....      .......  ...+..+.............      ....................
T Consensus       196 lG~il~el~~g~~pf~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T cd08227         196 VGITACELANGHVPFKDMP------ATQMLLE--KLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSN  267 (327)
T ss_pred             HHHHHHHHHHCCCCCCCcc------hhHHHHH--HhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccc
Confidence            9999999999999996432      1111111  11122211100000000000      00000000000000000000


Q ss_pred             HHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ............++.+.+|+.+||++||++|||++|+++||||++
T Consensus       268 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         268 GESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             cCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            000000122344668899999999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=5.6e-25  Score=169.38  Aligned_cols=166  Identities=28%  Similarity=0.457  Sum_probs=120.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.++++|+|+++.||+++.++.++|+|||.+.....  ......++..|+|||.+.+. .++.++|+||+|++++++++
T Consensus       115 Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~  194 (283)
T cd07830         115 IHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT  194 (283)
T ss_pred             HHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh
Confidence            5666779999999999999999999999999986653  23445788899999998654 57889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |.++|....      ....+.++...++.+................     ...+.........       .....+..+
T Consensus       195 g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~~~~~~~~  256 (283)
T cd07830         195 LRPLFPGSS------EIDQLYKICSVLGTPTKQDWPEGYKLASKLG-----FRFPQFAPTSLHQ-------LIPNASPEA  256 (283)
T ss_pred             CCCccCCCC------hHHHHHHHHHhcCCCChhhhhhHhhhhcccc-----ccccccccccHHH-------HcccCCHHH
Confidence            999997554      5677788888888776554322211111100     0001111111100       011224678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+|+++||+.+|++|||++|++.||||
T Consensus       257 ~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         257 IDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             HHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            899999999999999999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=1.2e-25  Score=173.10  Aligned_cols=139  Identities=19%  Similarity=0.246  Sum_probs=103.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc-----CCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~   99 (214)
                      .+|.++++|+|++++||++..++.++|+|||.+......   .....|++.|+|||.+..     ..++.++|+||+||+
T Consensus       136 ~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~  215 (282)
T cd06636         136 HLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGIT  215 (282)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHH
Confidence            356677799999999999999999999999998765422   234578889999999863     357889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||....      ....+..+.+   ..+.                       .              ....
T Consensus       216 l~el~~g~~p~~~~~------~~~~~~~~~~---~~~~-----------------------~--------------~~~~  249 (282)
T cd06636         216 AIEMAEGAPPLCDMH------PMRALFLIPR---NPPP-----------------------K--------------LKSK  249 (282)
T ss_pred             HHHHHhCCCCccccC------HHhhhhhHhh---CCCC-----------------------C--------------Cccc
Confidence            999999999996322      1111111100   0000                       0              0012


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..+..+.+||.+||..||.+|||+.|+|+||||
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            234577899999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=7.1e-25  Score=168.91  Aligned_cols=168  Identities=24%  Similarity=0.303  Sum_probs=118.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~  102 (214)
                      .+|....+|+|++++||+++.++.++|+|||.+......    .....++..|+|||.+.+. .++.++||||+|+++++
T Consensus       115 ~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~e  194 (287)
T cd07840         115 YLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAE  194 (287)
T ss_pred             HHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHH
Confidence            356666789999999999999999999999999877543    2344677889999988764 57899999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..||...+      ....+..+.+..+.+..............  ...    .+.....   ......  ....++
T Consensus       195 l~t~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~---~~~~~~--~~~~~~  257 (287)
T cd07840         195 LFLGKPIFQGST------ELEQLEKIFELCGSPTDENWPGVSKLPWF--ENL----KPKKPYK---RRLREF--FKHLID  257 (287)
T ss_pred             HHhCCCCCCCCC------hHHHHHHHHHHhCCCchhhccccccchhh--hhc----cccccch---hHHHHH--hcccCC
Confidence            999999997544      45666667666666554433221111000  000    0000000   000000  111235


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..+.+++.+||+.+|.+|||++++++||||
T Consensus       258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         258 PSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=2.5e-25  Score=191.33  Aligned_cols=133  Identities=20%  Similarity=0.333  Sum_probs=100.5

Q ss_pred             cccccccccccccCC-----------------CcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcC--CCCcchh
Q psy16751         34 HFTEDVQTRQYRSLP-----------------PFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINA--GYDCSAD   92 (214)
Q Consensus        34 ~~h~d~k~~nil~~~-----------------~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~--~~~~~~D   92 (214)
                      ++|+|+||.||++..                 .+.+||+|||++......  ....+||+.|+|||++.+.  .++.++|
T Consensus       146 IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSD  225 (1021)
T PTZ00266        146 VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSD  225 (1021)
T ss_pred             ceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhH
Confidence            799999999999853                 345899999999876432  3345799999999999764  4889999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHH
Q psy16751         93 IWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV  172 (214)
Q Consensus        93 iws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (214)
                      ||||||++++|++|..||...+      ...++......   .+..                                  
T Consensus       226 VWSLG~ILYELLTGk~PF~~~~------~~~qli~~lk~---~p~l----------------------------------  262 (1021)
T PTZ00266        226 MWALGCIIYELCSGKTPFHKAN------NFSQLISELKR---GPDL----------------------------------  262 (1021)
T ss_pred             HHHHHHHHHHHHHCCCCCCcCC------cHHHHHHHHhc---CCCC----------------------------------
Confidence            9999999999999999997433      22322222111   0000                                  


Q ss_pred             hhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       173 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                          .....+.++.+||..||..+|.+|||+.|+|+|||++
T Consensus       263 ----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        263 ----PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             ----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence                0012245678999999999999999999999999986

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.92  E-value=5.7e-25  Score=167.58  Aligned_cols=168  Identities=17%  Similarity=0.274  Sum_probs=119.3

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhh--hcccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y   76 (214)
                      +|.+++.....+....++..+  .++  ..+|...++|+|+++.||+++.++.++|+|||.+......  .....++..|
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~  158 (262)
T cd05572          79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEY  158 (262)
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCc
Confidence            455555554444444443321  122  2366677799999999999999999999999999876543  2334788899


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      ++||.+.+..++.++|+||+|++++++++|..||.....    ........+..  +..                     
T Consensus       159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~--~~~---------------------  211 (262)
T cd05572         159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE----DPMEIYNDILK--GNG---------------------  211 (262)
T ss_pred             cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC----CHHHHHHHHhc--cCC---------------------
Confidence            999999888899999999999999999999999975431    01111111110  000                     


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                       ....+...+.++.++|.+||+.||++|+|     ++|+++||||++
T Consensus       212 -----------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         212 -----------------KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             -----------------CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence                             00012223557789999999999999999     999999999974

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=6.7e-25  Score=170.50  Aligned_cols=166  Identities=24%  Similarity=0.325  Sum_probs=117.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+++.||+++.++.+||+|||.+......    .....++..|+|||.+.+. .++.++||||+||+++++
T Consensus       132 LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el  211 (302)
T cd07864         132 CHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL  211 (302)
T ss_pred             HHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHH
Confidence            56667799999999999999999999999999866432    2233567789999998764 478899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|+++|...+      ....+..+.+..+.+.............+.....    .....     .....   .....+.
T Consensus       212 ~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~---~~~~~~~  273 (302)
T cd07864         212 FTKKPIFQANQ------ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP----KKQYR-----RRLRE---EFSFIPT  273 (302)
T ss_pred             HhCCCCCCCCC------hHHHHHHHHHHhCCCChhhccccccccccccccc----ccccc-----cchhh---hcCCCCH
Confidence            99999997543      5667777777777665544332222111100000    00000     00000   0112355


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.+++.+||+.||++|||+++++.||||
T Consensus       274 ~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         274 PALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            67899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=2.1e-25  Score=173.13  Aligned_cols=141  Identities=21%  Similarity=0.253  Sum_probs=108.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+..+|+|+++.||+++.++.++|+|||++......   .....++..|+|||.+.+..++.++|+||+||++++++
T Consensus       130 ~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ll  209 (296)
T cd06655         130 FLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV  209 (296)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence            367777899999999999999999999999998765432   22346888999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+.. .+.++                                      ...+...+..
T Consensus       210 tg~~pf~~~~------~~~~~~~~~~-~~~~~--------------------------------------~~~~~~~~~~  244 (296)
T cd06655         210 EGEPPYLNEN------PLRALYLIAT-NGTPE--------------------------------------LQNPEKLSPI  244 (296)
T ss_pred             hCCCCCCCCC------HHHHHHHHHh-cCCcc--------------------------------------cCCcccCCHH
Confidence            9999997533      2222221111 00000                                      0011233456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+|+.+||..||.+|||+.++++||||+
T Consensus       245 ~~~li~~~l~~dp~~Rpt~~~il~~~~~~  273 (296)
T cd06655         245 FRDFLNRCLEMDVEKRGSAKELLQHPFLK  273 (296)
T ss_pred             HHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence            78999999999999999999999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.92  E-value=3.1e-25  Score=171.85  Aligned_cols=168  Identities=24%  Similarity=0.394  Sum_probs=118.3

Q ss_pred             cccccccccccccccccccCC-CcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++++||+++. ++.+||+|||++......   .....+++.|+|||.+.+. .++.++|+||+||++++
T Consensus       117 ~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~  196 (294)
T PLN00009        117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAE  196 (294)
T ss_pred             HHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            466677799999999999975 567999999999765322   2344678899999998775 57889999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|.+||...+      ..+.+.++....+.+....+........+...      .+.........       ..+..+
T Consensus       197 l~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------~~~~~~  257 (294)
T PLN00009        197 MVNQKPLFPGDS------EIDELFKIFRILGTPNEETWPGVTSLPDYKSA------FPKWPPKDLAT-------VVPTLE  257 (294)
T ss_pred             HHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhccccccchhhhhh------cccCCCCCHHH-------hCcCCC
Confidence            999999997544      45666666666666655443322211111000      00000000000       112345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+.+++.+||+.+|++||++.++++||||++
T Consensus       258 ~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        258 PAGVDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             hHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence            56789999999999999999999999999974

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.92  E-value=4.7e-25  Score=167.29  Aligned_cols=139  Identities=20%  Similarity=0.305  Sum_probs=104.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|+++.||+++.++.++|+|||.+......   .....++..|+|||.+.+..++.++|+||+|++++++++
T Consensus       115 lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~  194 (256)
T cd06612         115 LHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE  194 (256)
T ss_pred             HHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh
Confidence            55556799999999999999999999999998876433   233467889999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||....      .....   .......+.                                    ....+...+..+
T Consensus       195 g~~p~~~~~------~~~~~---~~~~~~~~~------------------------------------~~~~~~~~~~~~  229 (256)
T cd06612         195 GKPPYSDIH------PMRAI---FMIPNKPPP------------------------------------TLSDPEKWSPEF  229 (256)
T ss_pred             CCCCCCCcc------hhhhh---hhhccCCCC------------------------------------CCCchhhcCHHH
Confidence            999986422      11110   000000000                                    000112334567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+++.+||+.||++|||++|+|+||||
T Consensus       230 ~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         230 NDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            899999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=6.3e-25  Score=167.79  Aligned_cols=138  Identities=17%  Similarity=0.254  Sum_probs=102.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|...++|+|++++||+++.++.++|+|||+++.....      .....++..|+|||.+.+..++.++|+||+||++++
T Consensus       122 LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~e  201 (266)
T cd06651         122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVE  201 (266)
T ss_pred             HHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHH
Confidence            56666799999999999999999999999998765321      123457888999999998889999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|+.||....      ....+..+.   .....                                     ...+...+
T Consensus       202 l~~g~~pf~~~~------~~~~~~~~~---~~~~~-------------------------------------~~~~~~~~  235 (266)
T cd06651         202 MLTEKPPWAEYE------AMAAIFKIA---TQPTN-------------------------------------PQLPSHIS  235 (266)
T ss_pred             HHHCCCCccccc------hHHHHHHHh---cCCCC-------------------------------------CCCchhcC
Confidence            999999996322      112111111   00000                                     00122334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.+++ +||..+|++|||++|+++||||+
T Consensus       236 ~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         236 EHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            4567788 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.92  E-value=3e-25  Score=171.71  Aligned_cols=141  Identities=20%  Similarity=0.271  Sum_probs=104.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~   99 (214)
                      .+|...++|+|++++|+++..++.++|+|||.+......   .....|+..|+|||.+...     .++.++|+||+||+
T Consensus       143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi  222 (291)
T cd06639         143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT  222 (291)
T ss_pred             HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHH
Confidence            367777899999999999999999999999998765432   2334678889999998653     26789999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|.+||...+      ....+..+.   ...+...                                    ..+.
T Consensus       223 ~~el~~g~~p~~~~~------~~~~~~~~~---~~~~~~~------------------------------------~~~~  257 (291)
T cd06639         223 AIELGDGDPPLFDMH------PVKTLFKIP---RNPPPTL------------------------------------LHPE  257 (291)
T ss_pred             HHHHhhCCCCCCCCc------HHHHHHHHh---cCCCCCC------------------------------------Cccc
Confidence            999999999997432      122221111   1100000                                    0011


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .....+.+|+.+||+.+|++|||+.++++||||+
T Consensus       258 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         258 KWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            2234678999999999999999999999999996

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0612|consensus

Probab=99.92  E-value=2.3e-25  Score=188.64  Aligned_cols=139  Identities=17%  Similarity=0.270  Sum_probs=110.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~   99 (214)
                      +|.-..+|||+||.|+|++..|.+||+|||.|-.++..    +...+|||.|.+||++...     .|+..+|.||+||+
T Consensus       191 lH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~  270 (1317)
T KOG0612|consen  191 LHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVF  270 (1317)
T ss_pred             HHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHH
Confidence            55555689999999999999999999999999888632    4566999999999999832     48999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC-
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT-  178 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  178 (214)
                      +|||+.|..||+.++      -.+...+|...-.                                        .+.+| 
T Consensus       271 ~YEMlyG~TPFYads------lveTY~KIm~hk~----------------------------------------~l~FP~  304 (1317)
T KOG0612|consen  271 MYEMLYGETPFYADS------LVETYGKIMNHKE----------------------------------------SLSFPD  304 (1317)
T ss_pred             HHHHHcCCCcchHHH------HHHHHHHHhchhh----------------------------------------hcCCCc
Confidence            999999999998544      3555555554300                                        01111 


Q ss_pred             -hhhHHHHHHHHHHccccCCCCCCC---HHHHhcCCCCCC
Q psy16751        179 -PESARGFSEFLRPMLAYDPKLRAT---AADCLQHPWLQN  214 (214)
Q Consensus       179 -~~~~~~~~~ll~~~l~~dp~~R~t---~~e~l~hp~f~~  214 (214)
                       ...+.++++||.++++ +|+.|.+   ++++..||||.+
T Consensus       305 ~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g  343 (1317)
T KOG0612|consen  305 ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG  343 (1317)
T ss_pred             ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence             3356788999999886 5788887   999999999974

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=3e-25  Score=172.21  Aligned_cols=141  Identities=20%  Similarity=0.231  Sum_probs=106.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|++|+||+++.++.++|+|||.+......   .....+++.|+|||.+.+..++.++|+||+||++++++
T Consensus       131 ~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~  210 (296)
T cd06654         131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI  210 (296)
T ss_pred             HHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHH
Confidence            356667799999999999999999999999998765322   23347888999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      ....+..+.. .+.++                                      ...+...+..
T Consensus       211 ~g~~pf~~~~------~~~~~~~~~~-~~~~~--------------------------------------~~~~~~~~~~  245 (296)
T cd06654         211 EGEPPYLNEN------PLRALYLIAT-NGTPE--------------------------------------LQNPEKLSAI  245 (296)
T ss_pred             hCCCCCCCCC------HHHhHHHHhc-CCCCC--------------------------------------CCCccccCHH
Confidence            9999996433      1121111110 00000                                      0011223456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+++.+||..+|++|||+.++++||||.
T Consensus       246 l~~li~~~l~~~p~~Rpt~~eil~~~~~~  274 (296)
T cd06654         246 FRDFLNRCLDMDVEKRGSAKELLQHQFLK  274 (296)
T ss_pred             HHHHHHHHCcCCcccCcCHHHHhhChhhh
Confidence            78999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.8e-25  Score=167.83  Aligned_cols=166  Identities=17%  Similarity=0.253  Sum_probs=116.0

Q ss_pred             chhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccch
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSL   79 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aP   79 (214)
                      |.+++.....+....+...+.  ++  ..+|..+++|+|+++.||+++.++.++|+|||.+..... .....++..|++|
T Consensus        84 L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~p  162 (260)
T cd05611          84 CASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-NKKFVGTPDYLAP  162 (260)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-cccCCCCcCccCh
Confidence            444444444444444433211  22  246667779999999999999999999999999876543 2334688899999


Q ss_pred             HHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccC
Q psy16751         80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHI  159 (214)
Q Consensus        80 E~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (214)
                      |.+.+..++.++|+||+|++++++++|..||...+      .......+...  ...            +          
T Consensus       163 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~--~~~------------~----------  212 (260)
T cd05611         163 ETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET------PDAVFDNILSR--RIN------------W----------  212 (260)
T ss_pred             hhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhc--ccC------------C----------
Confidence            99998888999999999999999999999996433      12222211110  000            0          


Q ss_pred             CCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH---HHHhcCCCCCC
Q psy16751        160 PGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA---ADCLQHPWLQN  214 (214)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~---~e~l~hp~f~~  214 (214)
                      +              ......++..+.+++.+||+.||++|||+   +|+|.||||++
T Consensus       213 ~--------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         213 P--------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             C--------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence            0              00112345577899999999999999955   79999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.1e-25  Score=173.58  Aligned_cols=140  Identities=18%  Similarity=0.289  Sum_probs=106.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--------------------------------CCCCCcCCcc
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--------------------------------FTEDVQTRQY   76 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--------------------------------~~~~~~~~~y   76 (214)
                      +|..+++|+|+++.||+++.++.++|+|||++......                                ....+|+..|
T Consensus       119 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y  198 (316)
T cd05574         119 LHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEY  198 (316)
T ss_pred             HHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCC
Confidence            55566799999999999999999999999998754211                                1123678889


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      +|||++.+..++.++||||+|++++++++|..||...+      ....+..+..   ....                   
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~------~~~~~~~~~~---~~~~-------------------  250 (316)
T cd05574         199 IAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN------RDETFSNILK---KEVT-------------------  250 (316)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc------hHHHHHHHhc---CCcc-------------------
Confidence            99999998889999999999999999999999997543      2222222211   0000                   


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC----HHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT----AADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~e~l~hp~f~~  214 (214)
                                        .......+..+.+++.+||+.||++|||    ++++|+||||++
T Consensus       251 ------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         251 ------------------FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             ------------------CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence                              0001113557789999999999999999    999999999974

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=2.9e-25  Score=192.55  Aligned_cols=137  Identities=14%  Similarity=0.130  Sum_probs=96.2

Q ss_pred             cccccccccccccccccccCC-------------------CcceEEeecCCceeccCC-------------------CCC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-------------------PFLFDIGTYRNACWVDKH-------------------FTE   69 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-------------------~~~~kl~Dfg~a~~~~~~-------------------~~~   69 (214)
                      .+|...++|||+||+||++..                   ++.+|++|||+++.....                   ...
T Consensus        95 ~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (793)
T PLN00181         95 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQIL  174 (793)
T ss_pred             HHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccc
Confidence            477788899999999999954                   445667777776532110                   011


Q ss_pred             CCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccc
Q psy16751         70 DVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEF  149 (214)
Q Consensus        70 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  149 (214)
                      .+||++|+|||++.+.+|+.++||||+||+++||++|.+++..        ....+..+...  ..+...          
T Consensus       175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~--------~~~~~~~~~~~--~~~~~~----------  234 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE--------KSRTMSSLRHR--VLPPQI----------  234 (793)
T ss_pred             cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh--------HHHHHHHHHHh--hcChhh----------
Confidence            3688899999999999999999999999999999998877642        11111111100  001000          


Q ss_pred             ccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        150 FTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                                   ........+++.+||+++|.+|||+.|+|+||||.
T Consensus       235 -----------------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~  269 (793)
T PLN00181        235 -----------------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFIN  269 (793)
T ss_pred             -----------------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhh
Confidence                                         00112345889999999999999999999999996

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.92  E-value=4.3e-25  Score=174.67  Aligned_cols=167  Identities=23%  Similarity=0.370  Sum_probs=110.3

Q ss_pred             cccccccccccccccccccCC-CcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~   99 (214)
                      .+|.+.++|+|++++||++.. ++.++++|||.+......      .....++..|+|||.+.+. .++.++||||+||+
T Consensus       129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (342)
T cd07854         129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  208 (342)
T ss_pred             HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHH
Confidence            366677799999999999974 568899999999865322      1234678899999988764 58889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc-cccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS-SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++++++|..||.+.+      .......+.................. ......      ...........       ..
T Consensus       209 l~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------~~  269 (342)
T cd07854         209 FAEMLTGKPLFAGAH------ELEQMQLILESVPVVREEDRNELLNVIPSFVRN------DGGEPRRPLRD-------LL  269 (342)
T ss_pred             HHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh------cccccCCCHHH-------Hc
Confidence            999999999997544      34444444433332222111110000 000000      00000000000       01


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ...+.++.+|+.+||+.||.+|||++++++||||+
T Consensus       270 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~  304 (342)
T cd07854         270 PGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS  304 (342)
T ss_pred             cCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence            23445778999999999999999999999999996

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.92  E-value=7.6e-25  Score=168.71  Aligned_cols=165  Identities=28%  Similarity=0.474  Sum_probs=118.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|++++||+++.++.++++|||++......   .....++..|++||.+.+. .++.++|+||+||++++++
T Consensus       116 lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~  195 (284)
T cd07836         116 CHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMI  195 (284)
T ss_pred             HHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence            56666799999999999999999999999999765432   2334678889999998775 4788999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..+|.+.+      ..+....+.+..+.+.............+..      ..+........       ...+..+..
T Consensus       196 ~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------~~~~~~~~~  256 (284)
T cd07836         196 TGRPLFPGTN------NEDQLLKIFRIMGTPTESTWPGISQLPEYKP------TFPRYPPQDLQ-------QLFPHADPL  256 (284)
T ss_pred             hCCCCCCCCC------cHHHHHHHHHHhCCCChhhHHHHhcCchhcc------cccCCChHHHH-------HHhhhcCcH
Confidence            9999997544      4566666766666665544333222111110      00111100000       011234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+++.+||+.||.+|||++++++||||
T Consensus       257 ~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         257 GIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            7899999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.92  E-value=2.5e-25  Score=167.35  Aligned_cols=158  Identities=20%  Similarity=0.228  Sum_probs=115.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.+...+...++...+.  +.  +.+|...++|+|++|+|++++.++.++++|||.+...........++..|+|
T Consensus        71 ~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~a  150 (237)
T cd05576          71 KLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCA  150 (237)
T ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccC
Confidence            4566666665565555544221  22  2356677799999999999999999999999988776655455566778999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||.+.+.+++.++|+||+|++++++++|..++.....                      ......               
T Consensus       151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~----------------------~~~~~~---------------  193 (237)
T cd05576         151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS----------------------GINTHT---------------  193 (237)
T ss_pred             CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch----------------------hccccc---------------
Confidence            9999888889999999999999999999887642110                      000000               


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH-----HHHhcCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA-----ADCLQHPWL  212 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~-----~e~l~hp~f  212 (214)
                                     ....+...+..+.+++.+||+.||++|+|+     +++++||||
T Consensus       194 ---------------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         194 ---------------TLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             ---------------ccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence                           000122334567899999999999999986     999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=3.7e-25  Score=159.05  Aligned_cols=164  Identities=14%  Similarity=0.147  Sum_probs=109.5

Q ss_pred             cchhhhhccCc-hhhhhHHHHHHhhhcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHH
Q psy16751          3 SIFNFFVAFGS-LEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEV   81 (214)
Q Consensus         3 ~l~~~~~~~~~-~~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~   81 (214)
                      +|.+++...++ +....+.. +..+ ++..-..+|...|+.||+++.++.+++  ||.+.......  ..|++.|+|||+
T Consensus         2 sL~~~l~~~~~~l~~~~~~~-i~~q-i~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~--~~g~~~y~aPE~   75 (176)
T smart00750        2 SLADILEVRGRPLNEEEIWA-VCLQ-CLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPEQ--SRVDPYFMAPEV   75 (176)
T ss_pred             cHHHHHHHhCCCCCHHHHHH-HHHH-HHHHHHHHHhcCCcccEeEcCccceee--ccceEeecccc--CCCcccccChHH
Confidence            56777766444 55555533 2222 221112345555999999999999999  99998765432  378899999999


Q ss_pred             HhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCC
Q psy16751         82 LINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPG  161 (214)
Q Consensus        82 ~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (214)
                      +.+..|+.++||||+||+++++++|..||.....     ....+..+.........                       .
T Consensus        76 ~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~-----------------------~  127 (176)
T smart00750       76 IQGQSYTEKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNGMPADDP-----------------------R  127 (176)
T ss_pred             hcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHHhccCCc-----------------------c
Confidence            9999999999999999999999999999864221     01111221111000000                       0


Q ss_pred             CCCCchhhHHHhhcCCChhhH--HHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        162 LKPWDLYSVLVEKYNWTPESA--RGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ..  .          .+....  ..+.+++.+||..||.+|||+.|+++|+|+
T Consensus       128 ~~--~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      128 DR--S----------NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             cc--c----------cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            00  0          001112  257899999999999999999999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.92  E-value=2.8e-25  Score=174.95  Aligned_cols=143  Identities=13%  Similarity=0.202  Sum_probs=104.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhc-----CCCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~   99 (214)
                      +|...++|+|+|+.||+++.++.+||+|||++.......    ....|++.|+|||++.+     ..++.++|+||+||+
T Consensus       118 lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvi  197 (331)
T cd05624         118 IHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC  197 (331)
T ss_pred             HHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehh
Confidence            567778999999999999999999999999997664321    23479999999999986     357889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||...+      ..+.+..+......++                      .+               ....
T Consensus       198 l~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------~p---------------~~~~  234 (331)
T cd05624         198 MYEMLYGETPFYAES------LVETYGKIMNHEERFQ----------------------FP---------------SHIT  234 (331)
T ss_pred             hhhhhhCCCCccCCC------HHHHHHHHHcCCCccc----------------------CC---------------Cccc
Confidence            999999999997433      2222222221000000                      00               0001


Q ss_pred             hhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                      ..+..+.+|+.+||+.++++  |++++++++||||+.
T Consensus       235 ~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         235 DVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             cCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            23456789999999976654  568999999999963

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.92  E-value=1.1e-24  Score=170.31  Aligned_cols=173  Identities=20%  Similarity=0.190  Sum_probs=110.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcC--CCCcchhhHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINA--GYDCSADIWS   95 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~--~~~~~~Diws   95 (214)
                      .+|.+.++|+|++++||+++.++.++++|||.+......          .....++..|+|||++.+.  .++.++|+||
T Consensus       116 ~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws  195 (314)
T cd08216         116 YIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYS  195 (314)
T ss_pred             HHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHH
Confidence            467777899999999999999999999999998755321          1223567789999999864  5889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhc
Q psy16751         96 VACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY  175 (214)
Q Consensus        96 ~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (214)
                      +||+++++++|..||....      ....+  .....+..+..+.. ................     ............
T Consensus       196 ~G~il~el~~g~~pf~~~~------~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  261 (314)
T cd08216         196 VGITACELANGHVPFKDMP------ATQML--LEKVRGTVPCLLDK-STYPLYEDSMSQSRSS-----NEHPNNRDSVDH  261 (314)
T ss_pred             HHHHHHHHHhCCCCCCCCC------HHHHH--HHHHhccCcccccc-CchhhhcCCcCccccc-----ccccchhhhhhc
Confidence            9999999999999997432      11111  11222222211110 0000000000000000     000000000111


Q ss_pred             CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       176 ~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ......+.++.+|+.+||++||++|||++++|+||||+.
T Consensus       262 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~  300 (314)
T cd08216         262 PYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ  300 (314)
T ss_pred             chhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence            123445667899999999999999999999999999963

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.92  E-value=5.2e-25  Score=170.01  Aligned_cols=142  Identities=23%  Similarity=0.332  Sum_probs=107.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+.++|+|++++||+++.++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+||+||++++++
T Consensus       130 ~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell  209 (285)
T cd06648         130 FLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMV  209 (285)
T ss_pred             HHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence            356677799999999999999999999999988655332   22346888999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+..   ..+...                                    ..+...+..
T Consensus       210 ~g~~p~~~~~------~~~~~~~~~~---~~~~~~------------------------------------~~~~~~~~~  244 (285)
T cd06648         210 DGEPPYFNEP------PLQAMKRIRD---NLPPKL------------------------------------KNLHKVSPR  244 (285)
T ss_pred             hCCCCCcCCC------HHHHHHHHHh---cCCCCC------------------------------------cccccCCHH
Confidence            9999986422      2222222211   100000                                    001123456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||+.+|++|||+.++++||||++
T Consensus       245 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  274 (285)
T cd06648         245 LRSFLDRMLVRDPAQRATAAELLNHPFLAK  274 (285)
T ss_pred             HHHHHHHHcccChhhCcCHHHHccCccccc
Confidence            789999999999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.92  E-value=8.9e-25  Score=168.49  Aligned_cols=167  Identities=25%  Similarity=0.424  Sum_probs=116.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|+++.|++++.++.++|+|||++......   .....++..|+|||++.+. .++.++||||+||++++++
T Consensus       116 LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~  195 (286)
T cd07846         116 CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEML  195 (286)
T ss_pred             HHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHH
Confidence            56667799999999999999999999999998765322   2334678899999999865 4778999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.++|....      ..+.+..+.+..+............... ...    ...+......   ...   ...+..+..
T Consensus       196 ~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~---~~~---~~~~~~~~~  258 (286)
T cd07846         196 TGEPLFPGDS------DIDQLYHIIKCLGNLIPRHQEIFQKNPL-FAG----MRLPEVKEIE---PLE---KRFPKLSGL  258 (286)
T ss_pred             cCCCCCCCCc------hHHHHHHHHHHhCCCchhhHHHhccchH-hhc----cccccccCcc---hHH---HhCCCcCHH
Confidence            9999997543      4566666666666554332211110000 000    0000000000   000   012344567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+|+.+||+.+|++|||+.++++||||
T Consensus       259 ~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         259 VLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             HHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            8899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.92  E-value=4.5e-25  Score=171.34  Aligned_cols=141  Identities=20%  Similarity=0.310  Sum_probs=106.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|..+++|+|+++.||+++.++.++|+|||++......   .....|+..|+|||.+.+..++.++|+||+||+++++++
T Consensus       133 LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~  212 (297)
T cd06659         133 LHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD  212 (297)
T ss_pred             HHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence            56667799999999999999999999999998755322   233578889999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||....      ....+..+.   +..+...                                    ......+..+
T Consensus       213 g~~p~~~~~------~~~~~~~~~---~~~~~~~------------------------------------~~~~~~~~~l  247 (297)
T cd06659         213 GEPPYFSDS------PVQAMKRLR---DSPPPKL------------------------------------KNAHKISPVL  247 (297)
T ss_pred             CCCCCCCCC------HHHHHHHHh---ccCCCCc------------------------------------cccCCCCHHH
Confidence            999997432      222222211   1100000                                    0011233456


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+++.+||+.+|.+|||++++++||||.+
T Consensus       248 ~~~i~~~l~~~P~~Rps~~~ll~~~~~~~  276 (297)
T cd06659         248 RDFLERMLTREPQERATAQELLDHPFLLQ  276 (297)
T ss_pred             HHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence            89999999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=7.8e-25  Score=169.50  Aligned_cols=141  Identities=21%  Similarity=0.237  Sum_probs=104.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc-----CCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~l  100 (214)
                      +|.+.++|+|++++||++..++.++|+|||.+......   .....+++.|+|||.+.+     ..++.++|+||+||++
T Consensus       126 lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il  205 (292)
T cd06644         126 LHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL  205 (292)
T ss_pred             HhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHH
Confidence            56667799999999999999999999999998765322   233467889999999853     3477899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||...+      .......+   ....+..                                    ...+..
T Consensus       206 ~el~~g~~p~~~~~------~~~~~~~~---~~~~~~~------------------------------------~~~~~~  240 (292)
T cd06644         206 IEMAQIEPPHHELN------PMRVLLKI---AKSEPPT------------------------------------LSQPSK  240 (292)
T ss_pred             HHHhcCCCCCcccc------HHHHHHHH---hcCCCcc------------------------------------CCCCcc
Confidence            99999999986422      11111111   1110000                                    001123


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.++.+++.+||+.||++||+++++++||||+.
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  274 (292)
T cd06644         241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS  274 (292)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            3446789999999999999999999999999963

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=2.7e-25  Score=172.52  Aligned_cols=141  Identities=21%  Similarity=0.246  Sum_probs=106.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|++++||+++.++.++|+|||.+......   .....+++.|+|||.+.+..++.++|+||+||++++++
T Consensus       130 ~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~  209 (297)
T cd06656         130 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV  209 (297)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence            356667799999999999999999999999998766432   22347888999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+.      ...+..+. ..+.++                                      ...+...+..
T Consensus       210 tg~~pf~~~~~------~~~~~~~~-~~~~~~--------------------------------------~~~~~~~~~~  244 (297)
T cd06656         210 EGEPPYLNENP------LRALYLIA-TNGTPE--------------------------------------LQNPERLSAV  244 (297)
T ss_pred             hCCCCCCCCCc------chheeeec-cCCCCC--------------------------------------CCCccccCHH
Confidence            99999964331      11110000 000000                                      0011223445


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+|+.+||+.+|++|||++++++||||+
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~~~~~  273 (297)
T cd06656         245 FRDFLNRCLEMDVDRRGSAKELLQHPFLK  273 (297)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence            68999999999999999999999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=1e-24  Score=166.67  Aligned_cols=141  Identities=20%  Similarity=0.225  Sum_probs=102.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHh---cCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLI---NAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~---~~~~~~~~Diws~G~~l~  101 (214)
                      .+|.++++|+|++++||++..++.++|+|||++......   .....|+..|+|||.+.   +..++.++|+||+||+++
T Consensus       121 ~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~  200 (267)
T cd06645         121 YLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAI  200 (267)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHH
Confidence            356667799999999999999999999999998766432   23447899999999985   335888999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||....      ....+..+... ...+...                                    ......
T Consensus       201 ~l~~~~~p~~~~~------~~~~~~~~~~~-~~~~~~~------------------------------------~~~~~~  237 (267)
T cd06645         201 ELAELQPPMFDLH------PMRALFLMTKS-NFQPPKL------------------------------------KDKMKW  237 (267)
T ss_pred             HHhcCCCCccccc------chhhHHhhhcc-CCCCCcc------------------------------------cccCCC
Confidence            9999999986422      11111111100 0000000                                    000112


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      +..+.+|+.+||+.+|++|||++++++|||
T Consensus       238 ~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         238 SNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            345689999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0614|consensus

Probab=99.92  E-value=2.9e-25  Score=174.81  Aligned_cols=141  Identities=15%  Similarity=0.225  Sum_probs=120.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.++++.||+||+|.+++.+|.+||.|||.|+.....  .-+.+|||.|-|||+++..+.+.++|.||+|++++|+++
T Consensus       535 YLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~  614 (732)
T KOG0614|consen  535 YLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLT  614 (732)
T ss_pred             HHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHc
Confidence            478888899999999999999999999999999988654  335699999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |.+||.+.+      .+...+.|++-...                                        +.+|.......
T Consensus       615 G~pPFs~~d------pmktYn~ILkGid~----------------------------------------i~~Pr~I~k~a  648 (732)
T KOG0614|consen  615 GSPPFSGVD------PMKTYNLILKGIDK----------------------------------------IEFPRRITKTA  648 (732)
T ss_pred             CCCCCCCCc------hHHHHHHHHhhhhh----------------------------------------hhcccccchhH
Confidence            999999766      67777777654221                                        12344555567


Q ss_pred             HHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      .+|++++-..+|.+|..     +.++-+|.||.+
T Consensus       649 ~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  649 TDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             HHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            89999999999999996     899999999963

>KOG1006|consensus

Probab=99.92  E-value=7.4e-26  Score=165.31  Aligned_cols=139  Identities=19%  Similarity=0.269  Sum_probs=108.4

Q ss_pred             cccccccccccccCCCcceEEeecCCceeccC-C-CCCCCcCCcccchHHHhcC--CCCcchhhHHHHHHHHHHhhCCCC
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-H-FTEDVQTRQYRSLEVLINA--GYDCSADIWSVACMAFELATGDYL  109 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~-~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~l~~l~~g~~~  109 (214)
                      ++|||+||+|||+++.|.+|++|||++..... . .+..+|...|||||.+...  +|+-++|+||+|++++|+.+|..|
T Consensus       189 iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP  268 (361)
T KOG1006|consen  189 IIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP  268 (361)
T ss_pred             hhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence            48999999999999999999999999876533 2 3345899999999999854  599999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHH
Q psy16751        110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFL  189 (214)
Q Consensus       110 f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  189 (214)
                      +.++++     -.+|+..+..  |.+|. +....                                 .....+..+.+|+
T Consensus       269 yr~w~s-----vfeql~~Vv~--gdpp~-l~~~~---------------------------------~~~~~s~~~~~fi  307 (361)
T KOG1006|consen  269 YRKWDS-----VFEQLCQVVI--GDPPI-LLFDK---------------------------------ECVHYSFSMVRFI  307 (361)
T ss_pred             cchHHH-----HHHHHHHHHc--CCCCe-ecCcc---------------------------------cccccCHHHHHHH
Confidence            987663     3444444432  33322 11100                                 0122455778999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCC
Q psy16751        190 RPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       190 ~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .-||..|-+.||...+++.+||++
T Consensus       308 ntCl~Kd~~~Rpky~~Lk~~~fyr  331 (361)
T KOG1006|consen  308 NTCLIKDRSDRPKYDDLKKFPFYR  331 (361)
T ss_pred             HHHhhcccccCcchhhhhcCchhh
Confidence            999999999999999999999986

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=1.4e-24  Score=167.43  Aligned_cols=137  Identities=19%  Similarity=0.323  Sum_probs=103.0

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcC------CCCcchhhHHHHHHHHHHhh
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINA------GYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~------~~~~~~Diws~G~~l~~l~~  105 (214)
                      .++|+|++|+||+++.++.++|+|||.+...... .....+++.|+|||.+.+.      .++.++|+||+||+++++++
T Consensus       123 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~  202 (286)
T cd06622         123 NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMAL  202 (286)
T ss_pred             CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHh
Confidence            5789999999999999999999999999766432 3345788899999998654      35789999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||....      .......+.......+.                                      ..+...+.++
T Consensus       203 g~~pf~~~~------~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~  238 (286)
T cd06622         203 GRYPYPPET------YANIFAQLSAIVDGDPP--------------------------------------TLPSGYSDDA  238 (286)
T ss_pred             CCCCCCCcc------hhhHHHHHHHHhhcCCC--------------------------------------CCCcccCHHH
Confidence            999996432      11111111111111100                                      0123355677


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+|+.+||+.+|++||+++++++||||.
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~l~~~~~~~  266 (286)
T cd06622         239 QDFVAKCLNKIPNRRPTYAQLLEHPWLV  266 (286)
T ss_pred             HHHHHHHcccCcccCCCHHHHhcChhhh
Confidence            8999999999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.92  E-value=1.1e-24  Score=166.17  Aligned_cols=144  Identities=20%  Similarity=0.334  Sum_probs=106.6

Q ss_pred             ccc-cccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|. ...+|+|+++.||+++.++.++|+|||.+...... .....++..|+|||.+.+..++.++|+||+|++++++++|
T Consensus       116 lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g  195 (265)
T cd06605         116 LHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATG  195 (265)
T ss_pred             HcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence            455 56799999999999999999999999998765322 1226788899999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh-hhHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP-ESARGF  185 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  185 (214)
                      ..||.......    ......+.......+..                                      .+. ..+..+
T Consensus       196 ~~p~~~~~~~~----~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~  233 (265)
T cd06605         196 RFPYPPENDPP----DGIFELLQYIVNEPPPR--------------------------------------LPSGKFSPDF  233 (265)
T ss_pred             CCCCCcccccc----ccHHHHHHHHhcCCCCC--------------------------------------CChhhcCHHH
Confidence            99986432100    01111111111110000                                      011 145567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .++|.+||..||++|||+.+++.||||+.
T Consensus       234 ~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         234 QDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             HHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence            89999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.92  E-value=2.5e-24  Score=164.46  Aligned_cols=143  Identities=20%  Similarity=0.291  Sum_probs=105.6

Q ss_pred             cccccccccccccccccccCCCc-ceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      .+|..+.+|+|+++.||+++.++ .++|+|||.+......       .....++..|+|||.+.+..++.++|+||+|++
T Consensus       118 ~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~  197 (268)
T cd06630         118 YLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV  197 (268)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence            46667779999999999997765 6999999998766432       123467889999999988889999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||.....      ......+.+..-...                                     ....+.
T Consensus       198 l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~-------------------------------------~~~~~~  234 (268)
T cd06630         198 IIEMATAKPPWNAEKH------SNHLALIFKIASATT-------------------------------------APSIPE  234 (268)
T ss_pred             HHHHHhCCCCCCCCCC------cchHHHHHHHhccCC-------------------------------------CCCCch
Confidence            9999999999863321      111111111100000                                     000223


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.++.+++.+||+.+|.+|||+.++++||||+
T Consensus       235 ~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         235 HLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             hhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            3456778999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.2e-24  Score=167.44  Aligned_cols=141  Identities=22%  Similarity=0.288  Sum_probs=104.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc-----CCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~l  100 (214)
                      +|...++|+|+++.|+++..++.++|+|||.+......   .....++..|++||.+.+     ..++.++|+||+||++
T Consensus       119 lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il  198 (280)
T cd06611         119 LHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITL  198 (280)
T ss_pred             HHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHH
Confidence            56667799999999999999999999999998655322   233468889999999863     3477899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|.+||...+      ....+..+..  +..+.                                     ...+..
T Consensus       199 ~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~~-------------------------------------~~~~~~  233 (280)
T cd06611         199 IELAQMEPPHHELN------PMRVLLKILK--SEPPT-------------------------------------LDQPSK  233 (280)
T ss_pred             HHHHhCCCCcccCC------HHHHHHHHhc--CCCCC-------------------------------------cCCccc
Confidence            99999999996432      1221211111  00000                                     001122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.++.+|+.+||+.+|++|||++++++||||++
T Consensus       234 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         234 WSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence            3446789999999999999999999999999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.91  E-value=6.9e-25  Score=173.13  Aligned_cols=167  Identities=23%  Similarity=0.402  Sum_probs=118.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~   99 (214)
                      +|..+++|+|++++||+++.++.+||+|||.+......        .....|+..|+|||.+.+. .++.++|+||+||+
T Consensus       123 LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~  202 (337)
T cd07852         123 IHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI  202 (337)
T ss_pred             HHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHH
Confidence            56667799999999999999999999999999866322        1234688899999998764 57889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc--cccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS--SEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      ++++++|+.+|.+..      .......+....+.++..........  ...+.      ............       .
T Consensus       203 l~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~  263 (337)
T cd07852         203 LGEMLLGKPLFPGTS------TLNQLEKIIEVIGPPSAEDIESIKSPFAATMLD------SLPSRPRKPLDE-------L  263 (337)
T ss_pred             HHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhh------hcccccccchhh-------h
Confidence            999999999997544      45667777777776655433221110  00000      000000000000       1


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ....+..+.+++.+||+.||++|||+.++++||||++
T Consensus       264 ~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         264 LPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             ccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            1224567889999999999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.91  E-value=2.8e-24  Score=164.10  Aligned_cols=139  Identities=19%  Similarity=0.303  Sum_probs=104.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|...++|+|++++||++..++.++|+|||.++....      ......|+..|+|||.+.+..++.++|+||+||+++
T Consensus       121 ~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  200 (265)
T cd06652         121 YLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVV  200 (265)
T ss_pred             HHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHH
Confidence            35666779999999999999999999999999986532      122346888999999998888999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||....      ....   +.+....+..                                     ...+...
T Consensus       201 el~~g~~p~~~~~------~~~~---~~~~~~~~~~-------------------------------------~~~~~~~  234 (265)
T cd06652         201 EMLTEKPPWAEFE------AMAA---IFKIATQPTN-------------------------------------PVLPPHV  234 (265)
T ss_pred             HHhhCCCCCCccc------hHHH---HHHHhcCCCC-------------------------------------CCCchhh
Confidence            9999999996322      1222   1121111100                                     0012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +..+.+++++|+. +|++|||++++++|||++
T Consensus       235 ~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         235 SDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             CHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            4567899999995 999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.91  E-value=1.4e-24  Score=171.46  Aligned_cols=134  Identities=14%  Similarity=0.164  Sum_probs=99.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+||.||+++.++.+||+|||+++.....     .....+++.|+|||++.+..++.++||||+||+++++
T Consensus       190 LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el  269 (338)
T cd05102         190 LASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEI  269 (338)
T ss_pred             HHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHH
Confidence            56677799999999999999999999999999865321     1223456789999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ..+.+...... +..                                       ...+...+
T Consensus       270 ~~~g~~pf~~~~------~~~~~~~~~~~-~~~---------------------------------------~~~~~~~~  303 (338)
T cd05102         270 FSLGASPYPGVQ------INEEFCQRLKD-GTR---------------------------------------MRAPENAT  303 (338)
T ss_pred             HhCCCCCCCCCC------ccHHHHHHHhc-CCC---------------------------------------CCCCCCCC
Confidence            97 889986432      11111111110 000                                       00122344


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+||+.||++|||+.++++
T Consensus       304 ~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         304 PEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            56789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=4.4e-24  Score=162.06  Aligned_cols=164  Identities=21%  Similarity=0.301  Sum_probs=116.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y   76 (214)
                      +|.+++.....+....+.....  +.  ..+|...++|+|++++||+++.++.+||+|||.+......  .....++..|
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y  167 (258)
T cd06632          88 SLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW  167 (258)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcce
Confidence            4556665554444443322111  11  2356677799999999999999999999999998766433  2345688899


Q ss_pred             cchHHHhcCC-CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~-~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      ++||.+.... ++.++|+||+||+++++++|..||....      .......+... +..+                   
T Consensus       168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~-~~~~-------------------  221 (258)
T cd06632         168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE------GVAAVFKIGRS-KELP-------------------  221 (258)
T ss_pred             eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc------HHHHHHHHHhc-ccCC-------------------
Confidence            9999998776 8899999999999999999999996422      11211111110 0000                   


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                                          ..+...+..+.+|+.+||+.+|.+|||++++++|||+
T Consensus       222 --------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         222 --------------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             --------------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence                                0122345567899999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.91  E-value=9.5e-25  Score=166.54  Aligned_cols=142  Identities=22%  Similarity=0.263  Sum_probs=105.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-------CCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-------TEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      +|...++|+|+++.||+++.++.++|+|||.+.......       ...+|+..|++||.+... .++.++|+||+||++
T Consensus       118 lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~  197 (267)
T cd06610         118 LHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITA  197 (267)
T ss_pred             HHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHH
Confidence            566667999999999999999999999999987664321       233688899999999877 688999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||...+      ....+....+   ..+...                    +..             .....
T Consensus       198 ~~l~~g~~p~~~~~------~~~~~~~~~~---~~~~~~--------------------~~~-------------~~~~~  235 (267)
T cd06610         198 IELATGAAPYSKYP------PMKVLMLTLQ---NDPPSL--------------------ETG-------------ADYKK  235 (267)
T ss_pred             HHHHhCCCCccccC------hhhhHHHHhc---CCCCCc--------------------CCc-------------ccccc
Confidence            99999999997433      1121211111   100000                    000             00123


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+..+.+++.+||+.||++|||++++++||||
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         236 YSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            45677899999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.91  E-value=2e-24  Score=165.96  Aligned_cols=143  Identities=17%  Similarity=0.230  Sum_probs=107.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|...++|+|+++.||+++.++.++|+|||.+.....  ......++..|+|||.+.+..++.++|+||+||+++++++
T Consensus       110 ~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~  189 (277)
T cd05577         110 HLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIA  189 (277)
T ss_pred             HHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhh
Confidence            36667779999999999999999999999999876532  2233467788999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.......   ....+.....  .                                       .....+...+..+
T Consensus       190 g~~p~~~~~~~~---~~~~~~~~~~--~---------------------------------------~~~~~~~~~~~~~  225 (277)
T cd05577         190 GRSPFRQRKEKV---EKEELKRRTL--E---------------------------------------MAVEYPDKFSPEA  225 (277)
T ss_pred             CCCCCCCCcccc---cHHHHHhccc--c---------------------------------------ccccCCccCCHHH
Confidence            999996433110   1111111000  0                                       0001123345677


Q ss_pred             HHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                      .+++.+||+.||++||     ++.++++||||++
T Consensus       226 ~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         226 KDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             HHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence            8999999999999999     8999999999963

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.91  E-value=2.5e-24  Score=166.93  Aligned_cols=139  Identities=9%  Similarity=-0.014  Sum_probs=101.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC----------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVAC   98 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~   98 (214)
                      +|...++|||+||+||+++.++.++|+|||+|+....          ......||+.|+|||+..+..++.++||||+||
T Consensus       142 lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~  221 (294)
T PHA02882        142 IHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGY  221 (294)
T ss_pred             HHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHH
Confidence            6666779999999999999999999999999986631          112236899999999999889999999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCCcHHHHHHH-HHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         99 MAFELATGDYLFEPHAGDTYTRDEDHLAHI-IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      +++++++|..||...+.     ....+... ......+..        .                           . ..
T Consensus       222 ~l~el~~g~~P~~~~~~-----~~~~~~~~~~~~~~~~~~--------~---------------------------~-~~  260 (294)
T PHA02882        222 CMLKWAGIKLPWKGFGH-----NGNLIHAAKCDFIKRLHE--------G---------------------------K-IK  260 (294)
T ss_pred             HHHHHHhCCCCCCcccc-----chHHHHHhHHHHHHHhhh--------h---------------------------h-hc
Confidence            99999999999975431     11111110 000000000        0                           0 00


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ...++..+.+++..|++.+|++||+++++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        261 IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            1233456789999999999999999999875

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.91  E-value=2.1e-24  Score=163.73  Aligned_cols=137  Identities=20%  Similarity=0.268  Sum_probs=105.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++||+++.++.++|+|||++......   .....|++.|+|||++.+..++.++|+||+||+++++++
T Consensus       117 lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  196 (256)
T cd08529         117 LHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT  196 (256)
T ss_pred             HHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHh
Confidence            45566789999999999999999999999998876432   223467889999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      .......+.+  +..+                                       ..+...+..+
T Consensus       197 g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~~  229 (256)
T cd08529         197 GKHPFDANN------QGALILKIIR--GVFP---------------------------------------PVSQMYSQQL  229 (256)
T ss_pred             CCCCCCCCC------HHHHHHHHHc--CCCC---------------------------------------CCccccCHHH
Confidence            999996433      2222222211  0000                                       0112334567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+++.+||+.+|++||++.++++|||.
T Consensus       230 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         230 AQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            899999999999999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.91  E-value=1.4e-24  Score=167.15  Aligned_cols=141  Identities=21%  Similarity=0.328  Sum_probs=104.7

Q ss_pred             cccc-ccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhc----CCCCcchhhHHHHHHHH
Q psy16751         29 CWVD-KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLIN----AGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~-~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~----~~~~~~~Diws~G~~l~  101 (214)
                      +|.+ ..+|+|++++||+++.++.+||+|||.+......  .....++..|+|||.+.+    .+++.++|+||+||+++
T Consensus       119 lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~  198 (283)
T cd06617         119 LHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMI  198 (283)
T ss_pred             HhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHH
Confidence            4544 5789999999999999999999999999865432  223468889999999875    35788999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||.....     ..+.+.....  +..+.                        .              .....
T Consensus       199 ~l~~g~~p~~~~~~-----~~~~~~~~~~--~~~~~------------------------~--------------~~~~~  233 (283)
T cd06617         199 ELATGRFPYDSWKT-----PFQQLKQVVE--EPSPQ------------------------L--------------PAEKF  233 (283)
T ss_pred             HHHhCCCCCCcccc-----CHHHHHHHHh--cCCCC------------------------C--------------Ccccc
Confidence            99999999863221     2222222211  10000                        0              00123


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.++.+|+.+||..+|.+|||++++++||||++
T Consensus       234 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         234 SPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence            456789999999999999999999999999973

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=1.8e-24  Score=166.88  Aligned_cols=139  Identities=23%  Similarity=0.287  Sum_probs=102.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc-----CCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~l  100 (214)
                      +|.+.++|+|+++.||++..++.++|+|||.+......   .....|++.|+|||++.+     ..++.++|+||+||++
T Consensus       140 lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~  219 (286)
T cd06638         140 LHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA  219 (286)
T ss_pred             HHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence            56667799999999999999999999999998766432   233478899999999853     3478899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||....      ....+.....   ..+.                       .             ...+..
T Consensus       220 ~el~~g~~p~~~~~------~~~~~~~~~~---~~~~-----------------------~-------------~~~~~~  254 (286)
T cd06638         220 IELGDGDPPLADLH------PMRALFKIPR---NPPP-----------------------T-------------LHQPEL  254 (286)
T ss_pred             HHHhcCCCCCCCCc------hhHHHhhccc---cCCC-----------------------c-------------ccCCCC
Confidence            99999999986422      1111111100   0000                       0             001122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+..+.+|+.+||+.||++|||+.|+++|+||
T Consensus       255 ~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         255 WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            23467899999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=2.9e-24  Score=164.26  Aligned_cols=140  Identities=22%  Similarity=0.293  Sum_probs=102.6

Q ss_pred             cccccccccccccccccccCC-CcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC--CCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA--GYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~l~  101 (214)
                      .+|...++|+|+++.||+++. .+.++|+|||.+.....   ......|+..|+|||.+.+.  .++.++|+||+|++++
T Consensus       123 ~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~  202 (268)
T cd06624         123 YLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIV  202 (268)
T ss_pred             HHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHH
Confidence            356677799999999999976 67999999999876532   12234678899999999765  3788999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||.....     ........ .....                                       ....+...
T Consensus       203 ~l~~g~~p~~~~~~-----~~~~~~~~-~~~~~---------------------------------------~~~~~~~~  237 (268)
T cd06624         203 EMATGKPPFIELGE-----PQAAMFKV-GMFKI---------------------------------------HPEIPESL  237 (268)
T ss_pred             HHHhCCCCCccccC-----hhhhHhhh-hhhcc---------------------------------------CCCCCccc
Confidence            99999999863221     00000000 00000                                       00012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.++.+|+.+||..+|.+|||+.+++.||||
T Consensus       238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         238 SAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            5677899999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.91  E-value=4.9e-24  Score=166.06  Aligned_cols=142  Identities=15%  Similarity=0.156  Sum_probs=104.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------------------CCCCCcCCcccchHHHhcCCCCc
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------------FTEDVQTRQYRSLEVLINAGYDC   89 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~   89 (214)
                      .+|.+.++|+|++|.||++..++.++++|||.++.....                  .....++..|+|||.+.+..++.
T Consensus       116 ~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  195 (305)
T cd05609         116 YLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGK  195 (305)
T ss_pred             HHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCc
Confidence            356677799999999999999999999999998642100                  01235677899999998888999


Q ss_pred             chhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhh
Q psy16751         90 SADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS  169 (214)
Q Consensus        90 ~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (214)
                      ++|+||+||+++++++|..||.+.+      ..+.+..+.......+.                                
T Consensus       196 ~~Di~slG~vl~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~--------------------------------  237 (305)
T cd05609         196 PVDWWAMGIILYEFLVGCVPFFGDT------PEELFGQVISDDIEWPE--------------------------------  237 (305)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcccCCCC--------------------------------
Confidence            9999999999999999999997432      12222221110000000                                


Q ss_pred             HHHhhcCCChhhHHHHHHHHHHccccCCCCCCC---HHHHhcCCCCCC
Q psy16751        170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT---AADCLQHPWLQN  214 (214)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t---~~e~l~hp~f~~  214 (214)
                             .....+..+.++|.+||+.||++|||   +.++|+||||..
T Consensus       238 -------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         238 -------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             -------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence                   01123456789999999999999998   799999999963

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2e-24  Score=165.38  Aligned_cols=139  Identities=19%  Similarity=0.265  Sum_probs=104.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~l  100 (214)
                      +|...++|+|++++||+++.++.++|+|||.+......   .....|+..|+|||.+.+.     .++.++|+||+||++
T Consensus       129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il  208 (275)
T cd06608         129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITA  208 (275)
T ss_pred             HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHH
Confidence            66777799999999999999999999999998765432   2345788899999998643     467889999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||....      ....+..+..   ..+..                                    ...+..
T Consensus       209 ~~l~~g~~p~~~~~------~~~~~~~~~~---~~~~~------------------------------------~~~~~~  243 (275)
T cd06608         209 IELADGKPPLCDMH------PMRALFKIPR---NPPPT------------------------------------LKSPEN  243 (275)
T ss_pred             HHHHhCCCCccccc------hHHHHHHhhc---cCCCC------------------------------------CCchhh
Confidence            99999999996322      1222222111   00000                                    001122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+..+.+|+.+||..||++|||+.++++|||+
T Consensus       244 ~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         244 WSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             cCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            34567899999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0696|consensus

Probab=99.91  E-value=1.8e-24  Score=167.01  Aligned_cols=138  Identities=14%  Similarity=0.218  Sum_probs=117.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++.||+|-.|++++..|.+||+|||+++.-   +...++.+|||.|+|||++...+|+.++|.||+||+++||+.
T Consensus       466 Lh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla  545 (683)
T KOG0696|consen  466 LHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA  545 (683)
T ss_pred             hhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc
Confidence            67788899999999999999999999999998743   344567799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |++||.+.+      +.+....|.+.                                          ...+|...+.++
T Consensus       546 GQpPFdGeD------E~elF~aI~eh------------------------------------------nvsyPKslSkEA  577 (683)
T KOG0696|consen  546 GQPPFDGED------EDELFQAIMEH------------------------------------------NVSYPKSLSKEA  577 (683)
T ss_pred             CCCCCCCCC------HHHHHHHHHHc------------------------------------------cCcCcccccHHH
Confidence            999999766      56666655542                                          122456677788


Q ss_pred             HHHHHHccccCCCCCCCH-----HHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATA-----ADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~-----~e~l~hp~f~~  214 (214)
                      .++....|...|.+|..+     .++-.||||+.
T Consensus       578 v~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  578 VAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             HHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence            999999999999999863     57889999974

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.91  E-value=9.7e-25  Score=171.70  Aligned_cols=177  Identities=16%  Similarity=0.172  Sum_probs=105.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---C-------CCCCCcCCcccchHHHhcC--CCCcchhhHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---H-------FTEDVQTRQYRSLEVLINA--GYDCSADIWS   95 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~-------~~~~~~~~~y~aPE~~~~~--~~~~~~Diws   95 (214)
                      .+|...++|+|+||+||++..++.++++||+.+.....   .       .....++..|+|||++.+.  +++.++|+||
T Consensus       116 ~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws  195 (328)
T cd08226         116 YLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS  195 (328)
T ss_pred             HHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHH
Confidence            35666679999999999999999999999986543311   1       1112345679999999874  4789999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhcc---CCccccccccCcc-----ccCCCCCCCch
Q psy16751         96 VACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSG---HRSSEFFTKKGEL-----RHIPGLKPWDL  167 (214)
Q Consensus        96 ~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~  167 (214)
                      +||+++++++|..||....      ....+.   .....++.......   .............     ...........
T Consensus       196 lG~~l~el~~g~~p~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (328)
T cd08226         196 VGITACELATGRVPFQDML------RTQMLL---QKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQT  266 (328)
T ss_pred             HHHHHHHHHhCCCCCCCcC------hHHHHH---HHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccc
Confidence            9999999999999997433      122221   11111111000000   0000000000000     00000000000


Q ss_pred             hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .............++..+.+|+++||++||++|||++|+|+||||+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~  312 (328)
T cd08226         267 MTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK  312 (328)
T ss_pred             cccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence            0000000111234667889999999999999999999999999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.91  E-value=6.3e-24  Score=162.67  Aligned_cols=143  Identities=19%  Similarity=0.282  Sum_probs=103.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCC--CCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAG--YDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~--~~~~~Diws~G~~l  100 (214)
                      .+|.+.++|+|+++.||+++.++.++++|||.+......     .....|+..|+|||.+.+..  ++.++|+||+|+++
T Consensus       123 ~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l  202 (272)
T cd06629         123 YLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVV  202 (272)
T ss_pred             HHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHH
Confidence            356667799999999999999999999999998765432     12235778899999998754  78899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||....         ....+........         ...          .+.              .....
T Consensus       203 ~~l~~g~~p~~~~~---------~~~~~~~~~~~~~---------~~~----------~~~--------------~~~~~  240 (272)
T cd06629         203 LEMFAGRRPWSDEE---------AIAAMFKLGNKRS---------APP----------IPP--------------DVSMN  240 (272)
T ss_pred             HHHHhCCCCCcCcc---------hHHHHHHhhcccc---------CCc----------CCc--------------ccccc
Confidence            99999999985322         1111111100000         000          000              01123


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+..+.+++.+||..+|++|||++++|+||||
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         241 LSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             CCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            45677899999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.91  E-value=8.4e-24  Score=159.88  Aligned_cols=162  Identities=16%  Similarity=0.231  Sum_probs=117.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~   75 (214)
                      +|.+++.....+...++...+.  ++.  .+|....+|+|+++.||++..++.++|+|||.+......   .....++..
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05123          79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPE  158 (250)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcc
Confidence            4555555554555555544322  222  356666799999999999999999999999999876432   344577889


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |++||...+..++.++|+||+|++++++++|..||...+      .......+.+  +.                     
T Consensus       159 ~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~--~~---------------------  209 (250)
T cd05123         159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED------RKEIYEKILK--DP---------------------  209 (250)
T ss_pred             ccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc--CC---------------------
Confidence            999999988888899999999999999999999996432      1111111111  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH---HHHhcCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA---ADCLQHPWL  212 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~---~e~l~hp~f  212 (214)
                                         ...+...+..+.+++.+||+.||++|||+   +++++||||
T Consensus       210 -------------------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         210 -------------------LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence                               01122334567899999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=7.6e-24  Score=160.66  Aligned_cols=138  Identities=20%  Similarity=0.300  Sum_probs=104.6

Q ss_pred             cccccccccccccccccccCCC-cceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.++++|+|+++.||+++.+ +.++++|||.+......  .....++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       116 ~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~  195 (256)
T cd08220         116 HVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA  195 (256)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHH
Confidence            4666777999999999999754 56899999999876543  22346888999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..+|...+      .......+..  +...                                       ..+...+..
T Consensus       196 ~~~~~~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  228 (256)
T cd08220         196 SLKRAFEAAN------LPALVLKIMS--GTFA---------------------------------------PISDRYSPD  228 (256)
T ss_pred             hCCCCcccCc------hHHHHHHHHh--cCCC---------------------------------------CCCCCcCHH
Confidence            9999986433      1111111111  0000                                       011234456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+++.+||..+|++|||+.|+++||||
T Consensus       229 l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         229 LRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            7899999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.91  E-value=3.5e-24  Score=162.65  Aligned_cols=137  Identities=18%  Similarity=0.327  Sum_probs=106.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++|++++.++.++++|||.+......   .....|++.|+|||.+.+..++.++|+||+||+++++++
T Consensus       117 lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~  196 (256)
T cd08218         117 VHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCT  196 (256)
T ss_pred             HHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHc
Confidence            56667799999999999999999999999999876442   223467888999999988888899999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      ..+....+..  +..+.                                       .+...+.++
T Consensus       197 g~~~~~~~~------~~~~~~~~~~--~~~~~---------------------------------------~~~~~~~~~  229 (256)
T cd08218         197 LKHAFEAGN------MKNLVLKIIR--GSYPP---------------------------------------VSSHYSYDL  229 (256)
T ss_pred             CCCCccCCC------HHHHHHHHhc--CCCCC---------------------------------------CcccCCHHH
Confidence            999986422      1222222111  11100                                       122345567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+++.+||+.+|.+||++.++++||||
T Consensus       230 ~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         230 RNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            899999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.91  E-value=5.5e-24  Score=161.99  Aligned_cols=135  Identities=23%  Similarity=0.324  Sum_probs=104.6

Q ss_pred             ccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCC
Q psy16751         31 VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        31 ~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      ...++|+|+++.||+++.++.+||+|||++......   .....++..|+|||.+.+..++.++|+||+|++++++++|.
T Consensus       128 ~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~  207 (265)
T cd08217         128 GNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS  207 (265)
T ss_pred             cCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCC
Confidence            556799999999999999999999999999876532   23457889999999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||...+      .......+..  +..+                                       ..+...+..+.+
T Consensus       208 ~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~~~~  240 (265)
T cd08217         208 PPFTARN------QLQLASKIKE--GKFR---------------------------------------RIPYRYSSELNE  240 (265)
T ss_pred             CcccCcC------HHHHHHHHhc--CCCC---------------------------------------CCccccCHHHHH
Confidence            9996432      1111111110  0000                                       012233456789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ++.+||+.+|++|||++++++|||+
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.91  E-value=1.5e-23  Score=158.31  Aligned_cols=139  Identities=22%  Similarity=0.292  Sum_probs=106.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC--CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF--TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|..+.+|+|+++.||+++.++.++|+|||.+.......  ....++..|++||.+.+..++.++|+||+|++++++++
T Consensus       113 ~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~  192 (253)
T cd05122         113 YLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE  192 (253)
T ss_pred             HhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHh
Confidence            4666777999999999999999999999999998775442  45578889999999988888899999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      ....+..+..  ...+. .                                    ......+..+
T Consensus       193 g~~p~~~~~------~~~~~~~~~~--~~~~~-~------------------------------------~~~~~~~~~~  227 (253)
T cd05122         193 GKPPYSELP------PMKALFKIAT--NGPPG-L------------------------------------RNPEKWSDEF  227 (253)
T ss_pred             CCCCCCCCc------hHHHHHHHHh--cCCCC-c------------------------------------CcccccCHHH
Confidence            999986432      1122211111  00000 0                                    0011124567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      .+++.+||+.||++|||+.++++|||
T Consensus       228 ~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         228 KDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCCC
Confidence            89999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=7.9e-24  Score=163.25  Aligned_cols=145  Identities=19%  Similarity=0.233  Sum_probs=103.7

Q ss_pred             cccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      +.++|+|++++|+++..++.++|+|||++..... ......|+..|+|||++.+..++.++|+||+||+++++++|..||
T Consensus       123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~  202 (284)
T cd06620         123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF  202 (284)
T ss_pred             cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            3568999999999999999999999999876532 233457899999999998888999999999999999999999999


Q ss_pred             CCCCCCCCCC--cHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHH
Q psy16751        111 EPHAGDTYTR--DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF  188 (214)
Q Consensus       111 ~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  188 (214)
                      ..........  ...............+                       +..              .....+..+.+|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~--------------~~~~~~~~~~~l  245 (284)
T cd06620         203 AFSNIDDDGQDDPMGILDLLQQIVQEPP-----------------------PRL--------------PSSDFPEDLRDF  245 (284)
T ss_pred             cccchhhhhhhhhhHHHHHHHHHhhccC-----------------------CCC--------------CchhcCHHHHHH
Confidence            7543211000  0000000000000000                       000              001234567899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        189 LRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       189 l~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+||+.||++|||++|+++|+||.
T Consensus       246 i~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         246 VDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             HHHHhcCCcccCcCHHHHhcCcccc
Confidence            9999999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1e-23  Score=160.46  Aligned_cols=140  Identities=21%  Similarity=0.224  Sum_probs=105.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC---CCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA---GYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~~  102 (214)
                      +|.+.++|+|++++||+++.++.++|+|||.+......   .....++..|+|||.+.+.   .++.++|+||+||++++
T Consensus       117 lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~  196 (262)
T cd06613         117 LHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIE  196 (262)
T ss_pred             HHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHH
Confidence            56667799999999999999999999999998766432   2345788899999999877   78889999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|.+||...+      .......+... +..+..                                    .......+
T Consensus       197 ~~tg~~p~~~~~------~~~~~~~~~~~-~~~~~~------------------------------------~~~~~~~~  233 (262)
T cd06613         197 LAELQPPMFDLH------PMRALFLISKS-NFPPPK------------------------------------LKDKEKWS  233 (262)
T ss_pred             HHhCCCCCCCCC------HHHHHHHHHhc-cCCCcc------------------------------------ccchhhhh
Confidence            999999996433      22222211110 000000                                    00012234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      .++.+|+.+||+.+|.+|||+++++.|+|
T Consensus       234 ~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         234 PVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            56789999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.90  E-value=9e-24  Score=162.21  Aligned_cols=162  Identities=19%  Similarity=0.337  Sum_probs=115.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCC-----------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----------   67 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----------   67 (214)
                      +|.+++.....+....+.....  +.  ..+|.+..+|+|++++||++..++.++++|||++.......           
T Consensus        88 ~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~  167 (280)
T cd05581          88 ELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATN  167 (280)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCcc
Confidence            3445555544444444433211  11  23666777999999999999999999999999988664322           


Q ss_pred             ------------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCC
Q psy16751         68 ------------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDI  135 (214)
Q Consensus        68 ------------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~  135 (214)
                                  ....++..|+|||...+..++.++|+||+|++++++++|..||...+      ....+..+....   
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~---  238 (280)
T cd05581         168 IDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN------EYLTFQKILKLE---  238 (280)
T ss_pred             ccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhcC---
Confidence                        12356788999999988888999999999999999999999997433      122222221100   


Q ss_pred             ChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH----HHHhcCCC
Q psy16751        136 PKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA----ADCLQHPW  211 (214)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~----~e~l~hp~  211 (214)
                                                             ...+...+..+.+|+.+||+.+|++|||+    +++++|||
T Consensus       239 ---------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~  279 (280)
T cd05581         239 ---------------------------------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF  279 (280)
T ss_pred             ---------------------------------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence                                                   01122334567899999999999999999    99999999


Q ss_pred             C
Q psy16751        212 L  212 (214)
Q Consensus       212 f  212 (214)
                      |
T Consensus       280 ~  280 (280)
T cd05581         280 F  280 (280)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.90  E-value=4.4e-24  Score=165.39  Aligned_cols=141  Identities=21%  Similarity=0.301  Sum_probs=106.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|++++||+++.++.++|+|||.+......   .....|+..|++||.+.+..++.++|+||+|+++++++
T Consensus       131 ~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~  210 (292)
T cd06657         131 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV  210 (292)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence            356677799999999999999999999999998765432   23346888999999998878899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+..      ....+..+...   .+..                                    .......+..
T Consensus       211 tg~~p~~~~~------~~~~~~~~~~~---~~~~------------------------------------~~~~~~~~~~  245 (292)
T cd06657         211 DGEPPYFNEP------PLKAMKMIRDN---LPPK------------------------------------LKNLHKVSPS  245 (292)
T ss_pred             hCCCCCCCCC------HHHHHHHHHhh---CCcc------------------------------------cCCcccCCHH
Confidence            9999987432      12222221111   0000                                    0001123445


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+++.+||+.+|.+||++.++++||||.
T Consensus       246 l~~li~~~l~~~P~~R~~~~~ll~~~~~~  274 (292)
T cd06657         246 LKGFLDRLLVRDPAQRATAAELLKHPFLA  274 (292)
T ss_pred             HHHHHHHHHhCCcccCcCHHHHhcChHHh
Confidence            67999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.90  E-value=5.4e-24  Score=163.61  Aligned_cols=139  Identities=25%  Similarity=0.318  Sum_probs=106.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|....+|+|++|.||+++.++.++++|||++......   .....++..|+|||.+.+..++.++|+||+||+++++++
T Consensus       117 lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~t  196 (277)
T cd06640         117 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK  196 (277)
T ss_pred             HHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHH
Confidence            56677799999999999999999999999999766432   223467888999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      .......+..  +.++                                       ......+..+
T Consensus       197 g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~~  229 (277)
T cd06640         197 GEPPNSDMH------PMRVLFLIPK--NNPP---------------------------------------TLTGEFSKPF  229 (277)
T ss_pred             CCCCCCCcC------hHhHhhhhhc--CCCC---------------------------------------CCchhhhHHH
Confidence            999986432      1111110000  0000                                       0123345677


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+++.+||+.+|++|||++++++||||.+
T Consensus       230 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06640         230 KEFIDACLNKDPSFRPTAKELLKHKFIVK  258 (277)
T ss_pred             HHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence            89999999999999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0586|consensus

Probab=99.90  E-value=1.6e-24  Score=173.64  Aligned_cols=162  Identities=18%  Similarity=0.365  Sum_probs=130.0

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhh-----cccccccccccccccccccCCCcceEEeecCCceecc--CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRN-----ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD--KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~-----~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~   75 (214)
                      ++|+|+++....-+...++ .|-+.     -||.+.++|||+|.+|++++.+..+||+|||++..+.  ....+.+|++.
T Consensus       141 e~~~yl~~~gr~~e~~ar~-~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgspp  219 (596)
T KOG0586|consen  141 ELFDYLVKHGRMKEKEARA-KFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPP  219 (596)
T ss_pred             hhHHHHHhcccchhhhhhh-hhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccCCCCC
Confidence            6899999999998855544 44332     3888888999999999999999999999999998875  45667899999


Q ss_pred             ccchHHHhcCCCC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         76 YRSLEVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        76 y~aPE~~~~~~~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      |.|||+..|..|+ +.+|+||+|+++|-++.|..||.+.+=.                 ...+                 
T Consensus       220 yAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----------------~Lr~-----------------  265 (596)
T KOG0586|consen  220 YAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----------------ELRP-----------------  265 (596)
T ss_pred             ccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-----------------cccc-----------------
Confidence            9999999999876 6999999999999999999999753300                 0000                 


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                    ..+..++..+-.++.++.++|+++|.++|++|++.++++.|.|..
T Consensus       266 --------------rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n  310 (596)
T KOG0586|consen  266 --------------RVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRN  310 (596)
T ss_pred             --------------hheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccc
Confidence                          001112234455566778999999999999999999999999964

>KOG1167|consensus

Probab=99.90  E-value=1.7e-24  Score=166.67  Aligned_cols=180  Identities=20%  Similarity=0.239  Sum_probs=116.6

Q ss_pred             ccccccccccccccccccCC-CcceEEeecCCceecc---------C------------------------C--------
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVD---------K------------------------H--------   66 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~---------~------------------------~--------   66 (214)
                      +|.++++|||+||+|++... .+.-.|+|||+|...+         .                        +        
T Consensus       148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~  227 (418)
T KOG1167|consen  148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN  227 (418)
T ss_pred             hhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence            77888899999999999866 5788999999987220         0                        0        


Q ss_pred             ------CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHH
Q psy16751         67 ------FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI  139 (214)
Q Consensus        67 ------~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  139 (214)
                            ...+.||++|+|||+++..+ .++++||||.||++..++++..||.....     +.+.+..+..++|.-...-
T Consensus       228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~d-----d~~al~ei~tifG~~~mrk  302 (418)
T KOG1167|consen  228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKD-----DADALAEIATIFGSAEMRK  302 (418)
T ss_pred             CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCcc-----ccchHHHHHHHhChHHHHH
Confidence                  01236999999999999875 78899999999999999999999876553     5667777777777532221


Q ss_pred             hhccCCccccccccC--cc----ccCCCCCCCchhh-HH--HhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCC
Q psy16751        140 IQSGHRSSEFFTKKG--EL----RHIPGLKPWDLYS-VL--VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHP  210 (214)
Q Consensus       140 ~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp  210 (214)
                      .....+....+....  ..    ............. ..  .......+..+..+.||+.+||+.||.+|.||+++|+||
T Consensus       303 ~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp  382 (418)
T KOG1167|consen  303 CAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP  382 (418)
T ss_pred             HhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence            111100000111000  00    0000000000000 00  000111233345788999999999999999999999999


Q ss_pred             CCC
Q psy16751        211 WLQ  213 (214)
Q Consensus       211 ~f~  213 (214)
                      ||.
T Consensus       383 FF~  385 (418)
T KOG1167|consen  383 FFD  385 (418)
T ss_pred             CCc
Confidence            996

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.90  E-value=1.6e-23  Score=158.66  Aligned_cols=139  Identities=23%  Similarity=0.311  Sum_probs=106.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|....+|+|+++.||++..++.++|+|||.+......     .....++..|++||.+.+..++.++|+||+|++++++
T Consensus       117 lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l  196 (260)
T cd06606         117 LHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEM  196 (260)
T ss_pred             HHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence            56666799999999999999999999999999877543     3445788899999999888889999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||....        ............         ..                            ....+...+.
T Consensus       197 ~~g~~p~~~~~--------~~~~~~~~~~~~---------~~----------------------------~~~~~~~~~~  231 (260)
T cd06606         197 ATGKPPWSELG--------NPMAALYKIGSS---------GE----------------------------PPEIPEHLSE  231 (260)
T ss_pred             HhCCCCCCCCC--------chHHHHHhcccc---------CC----------------------------CcCCCcccCH
Confidence            99999996432        111111111000         00                            0012233356


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+.+|+.+||+.||++|||+.++++||||
T Consensus       232 ~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         232 EAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            77899999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.90  E-value=1.2e-23  Score=160.14  Aligned_cols=138  Identities=19%  Similarity=0.319  Sum_probs=105.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----------CCCCCcCCcccchHHHhcCCCCcchhhHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----------FTEDVQTRQYRSLEVLINAGYDCSADIWSVA   97 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G   97 (214)
                      +|...++|+|+++.||+++.++.++|+|||++......           .....++..|++||...+..++.++|+||+|
T Consensus       109 lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG  188 (265)
T cd05579         109 LHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLG  188 (265)
T ss_pred             HHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHH
Confidence            56666799999999999999999999999998755322           1233677889999999888889999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      ++++++++|..||....      .......+..  +..+                                        .
T Consensus       189 ~~~~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~----------------------------------------~  220 (265)
T cd05579         189 CILYEFLVGIPPFHGET------PEEIFQNILN--GKIE----------------------------------------W  220 (265)
T ss_pred             HHHHHHHhCCCCCCCCC------HHHHHHHHhc--CCcC----------------------------------------C
Confidence            99999999999996432      2222222111  0000                                        0


Q ss_pred             Chh--hHHHHHHHHHHccccCCCCCCCH---HHHhcCCCCCC
Q psy16751        178 TPE--SARGFSEFLRPMLAYDPKLRATA---ADCLQHPWLQN  214 (214)
Q Consensus       178 ~~~--~~~~~~~ll~~~l~~dp~~R~t~---~e~l~hp~f~~  214 (214)
                      +..  .+..+.+|+.+||+.+|++|||+   .++|+||||++
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            111  24567899999999999999999   99999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG1026|consensus

Probab=99.90  E-value=2.3e-24  Score=178.43  Aligned_cols=128  Identities=12%  Similarity=0.182  Sum_probs=105.9

Q ss_pred             cccccccccccccccCCCcceEEeecCCceeccCCCCCCCc-----CCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQ-----TRQYRSLEVLINAGYDCSADIWSVACMAFELAT-  105 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-  105 (214)
                      +..+|||+..+|+|+.++-.|||+|||+++......++.++     +..|||||.|+...|+.++||||+||++||+++ 
T Consensus       622 ~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsy  701 (774)
T KOG1026|consen  622 HHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSY  701 (774)
T ss_pred             CcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhcc
Confidence            33479999999999999999999999999988654443443     346999999999999999999999999999998 


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..|+++..      +.+.+..+.+-  .                                       -...|.+++.++
T Consensus       702 G~QPy~glS------n~EVIe~i~~g--~---------------------------------------lL~~Pe~CP~~v  734 (774)
T KOG1026|consen  702 GKQPYYGLS------NQEVIECIRAG--Q---------------------------------------LLSCPENCPTEV  734 (774)
T ss_pred             ccCcccccc------hHHHHHHHHcC--C---------------------------------------cccCCCCCCHHH
Confidence            888888665      56766665431  1                                       013568889999


Q ss_pred             HHHHHHccccCCCCCCCHHHH
Q psy16751        186 SEFLRPMLAYDPKLRATAADC  206 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~  206 (214)
                      .+||.+||+.+|++|||++|+
T Consensus       735 Y~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  735 YSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             HHHHHHHhhcCcccCCCHHHH
Confidence            999999999999999999986

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.90  E-value=5.6e-24  Score=165.05  Aligned_cols=139  Identities=21%  Similarity=0.290  Sum_probs=102.0

Q ss_pred             cccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCC----CCcchhhHHHHHHHHHHhh
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAG----YDCSADIWSVACMAFELAT  105 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~----~~~~~Diws~G~~l~~l~~  105 (214)
                      +.++|+|+++.||+++.++.++|+|||.+......  .....++..|+|||.+.+..    ++.++|+||+|++++++++
T Consensus       134 ~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~  213 (296)
T cd06618         134 HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELAT  213 (296)
T ss_pred             CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHh
Confidence            35789999999999999999999999998765432  23346778899999997653    7889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |+.||.....     ..+.+..+.   .....                       ..             ......+.++
T Consensus       214 g~~p~~~~~~-----~~~~~~~~~---~~~~~-----------------------~~-------------~~~~~~~~~l  249 (296)
T cd06618         214 GQFPYKNCKT-----EFEVLTKIL---QEEPP-----------------------SL-------------PPNEGFSPDF  249 (296)
T ss_pred             CCCCCCcchh-----HHHHHHHHh---cCCCC-----------------------CC-------------CCCCCCCHHH
Confidence            9999963210     111121111   11000                       00             0001234567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+|+.+||..||.+|||++++++||||+.
T Consensus       250 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         250 CSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             HHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence            89999999999999999999999999863

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.90  E-value=2.6e-23  Score=158.38  Aligned_cols=141  Identities=24%  Similarity=0.331  Sum_probs=104.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-------CCCCcCCcccchHHHhcCC---CCcchhhHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-------TEDVQTRQYRSLEVLINAG---YDCSADIWSVA   97 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~y~aPE~~~~~~---~~~~~Diws~G   97 (214)
                      .+|...++|+|+++.||+++.++.+||+|||.+.......       ....++..|+|||.+.+..   ++.++|+||+|
T Consensus       114 ~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G  193 (264)
T cd06626         114 YLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG  193 (264)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence            3566777999999999999999999999999988764321       1245778899999998765   78899999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      ++++++++|..||....      ........... +..+.                     .                ..
T Consensus       194 ~il~~l~~g~~pf~~~~------~~~~~~~~~~~-~~~~~---------------------~----------------~~  229 (264)
T cd06626         194 CVVLEMATGKRPWSELD------NEFQIMFHVGA-GHKPP---------------------I----------------PD  229 (264)
T ss_pred             HHHHHHHhCCCCccCCc------chHHHHHHHhc-CCCCC---------------------C----------------Cc
Confidence            99999999999996432      11111111110 11100                     0                00


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ....+..+.+|+.+||+.+|.+|||+.++++|||+
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            01224566799999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=1.9e-23  Score=161.41  Aligned_cols=150  Identities=18%  Similarity=0.254  Sum_probs=106.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|..+.+|+|+++.|++++.++.++|+|||++...... .....++..|++||.+.+..++.++|+||+||+++++++|.
T Consensus       121 lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~  200 (287)
T cd06621         121 LHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR  200 (287)
T ss_pred             HHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            56667799999999999999999999999998765432 23346778899999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||..... ......+....+..   ...... ..                   .            .......+..+.+
T Consensus       201 ~p~~~~~~-~~~~~~~~~~~~~~---~~~~~~-~~-------------------~------------~~~~~~~~~~~~~  244 (287)
T cd06621         201 FPFPPEGE-PPLGPIELLSYIVN---MPNPEL-KD-------------------E------------PGNGIKWSEEFKD  244 (287)
T ss_pred             CCCCcccC-CCCChHHHHHHHhc---CCchhh-cc-------------------C------------CCCCCchHHHHHH
Confidence            99974321 00011111111110   000000 00                   0            0000123456789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      |+.+||..+|++|||+.|+++||||++
T Consensus       245 li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         245 FIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             HHHHHcCCCcccCCCHHHHHhCccccc
Confidence            999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1989|consensus

Probab=99.90  E-value=3.5e-24  Score=177.76  Aligned_cols=125  Identities=19%  Similarity=0.257  Sum_probs=96.6

Q ss_pred             cccccccccccccCCCcceEEeecCCceeccCCC------------CCCCcCCcccchHHHh---cCCCCcchhhHHHHH
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------------TEDVQTRQYRSLEVLI---NAGYDCSADIWSVAC   98 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------------~~~~~~~~y~aPE~~~---~~~~~~~~Diws~G~   98 (214)
                      ++|||+|.+|+|+..+|..||||||.|...-...            .....|+.|||||++.   +.+.+.++||||+||
T Consensus       167 iIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGc  246 (738)
T KOG1989|consen  167 IIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGC  246 (738)
T ss_pred             cchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHH
Confidence            4899999999999999999999999997553211            1226789999999997   457899999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751         99 MAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      +||.|+....||.....      ..    |+                     ..+.                   .++..
T Consensus       247 lLYkLCy~t~PFe~sg~------la----Il---------------------ng~Y-------------------~~P~~  276 (738)
T KOG1989|consen  247 LLYKLCYFTTPFEESGK------LA----IL---------------------NGNY-------------------SFPPF  276 (738)
T ss_pred             HHHHHHHhCCCcCcCcc------ee----EE---------------------eccc-------------------cCCCC
Confidence            99999999999974320      00    00                     0000                   01122


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+..+.+||+.||+.||++||++.|++.
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            456778899999999999999999999874

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.90  E-value=1.3e-23  Score=159.96  Aligned_cols=142  Identities=24%  Similarity=0.346  Sum_probs=107.2

Q ss_pred             ccc-cccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|. ...+|+|+++.||+++.++.++|+|||.+.......   ....++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       115 lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~  194 (264)
T cd06623         115 LHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECA  194 (264)
T ss_pred             HhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHH
Confidence            555 667999999999999999999999999998764322   2346788999999998888899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh-hHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE-SAR  183 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  183 (214)
                      +|..||.....   ....+....+.   .....                                      ..+.. .+.
T Consensus       195 tg~~p~~~~~~---~~~~~~~~~~~---~~~~~--------------------------------------~~~~~~~~~  230 (264)
T cd06623         195 LGKFPFLPPGQ---PSFFELMQAIC---DGPPP--------------------------------------SLPAEEFSP  230 (264)
T ss_pred             hCCCCCccccc---cCHHHHHHHHh---cCCCC--------------------------------------CCCcccCCH
Confidence            99999965331   00111111111   00000                                      01122 455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.+++.+||..+|++|||+.++++||||++
T Consensus       231 ~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         231 EFRDFISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence            7789999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.90  E-value=5.3e-24  Score=162.68  Aligned_cols=140  Identities=20%  Similarity=0.199  Sum_probs=100.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc---CCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN---AGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|+++.|+++..++.++|+|||++......   .....|+..|+|||.+.+   ..++.++|+||+||++++
T Consensus       122 lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~e  201 (267)
T cd06646         122 LHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIE  201 (267)
T ss_pred             HHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHH
Confidence            56667799999999999999999999999999866432   233468889999999863   347789999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|+.||.....      ......+...  ..                     . .+..             ......+
T Consensus       202 l~~g~~p~~~~~~------~~~~~~~~~~--~~---------------------~-~~~~-------------~~~~~~~  238 (267)
T cd06646         202 LAELQPPMFDLHP------MRALFLMSKS--NF---------------------Q-PPKL-------------KDKTKWS  238 (267)
T ss_pred             HHhCCCCccccch------hhhheeeecC--CC---------------------C-CCCC-------------ccccccC
Confidence            9999998853220      0000000000  00                     0 0000             0011234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      ..+.+|+++||+.+|++|||++++++|+|
T Consensus       239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         239 STFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            56789999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.90  E-value=1.4e-23  Score=159.35  Aligned_cols=137  Identities=21%  Similarity=0.354  Sum_probs=105.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|....+|+|++++||+++.++.+||+|||.+.......   ....+++.|.|||.+.+..++.++|+||+|++++++++
T Consensus       117 lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~  196 (256)
T cd08221         117 IHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT  196 (256)
T ss_pred             HHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHH
Confidence            555667899999999999999999999999998764332   34578899999999998888999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..+|...+      ..+....+..  +..+.                                       .+...+..+
T Consensus       197 g~~~~~~~~------~~~~~~~~~~--~~~~~---------------------------------------~~~~~~~~~  229 (256)
T cd08221         197 LKRTFDATN------PLNLVVKIVQ--GNYTP---------------------------------------VVSVYSSEL  229 (256)
T ss_pred             CCCCCCCCC------HHHHHHHHHc--CCCCC---------------------------------------CccccCHHH
Confidence            999986422      1222222211  11100                                       012234567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+++.+||+.+|.+|||++++|+|||+
T Consensus       230 ~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         230 ISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            899999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.90  E-value=1.5e-23  Score=163.94  Aligned_cols=139  Identities=21%  Similarity=0.277  Sum_probs=104.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc---CCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN---AGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++||++..++.++|+|||.+..... .....|+..|+|||.+.+   ..++.++|+||+||+++++++
T Consensus       137 LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~  215 (313)
T cd06633         137 LHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  215 (313)
T ss_pred             HHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHh
Confidence            5666779999999999999999999999999864432 334578889999999853   458889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      ....+..+..  +..+..                                      .....+..+
T Consensus       216 g~~p~~~~~------~~~~~~~~~~--~~~~~~--------------------------------------~~~~~~~~l  249 (313)
T cd06633         216 RKPPLFNMN------AMSALYHIAQ--NDSPTL--------------------------------------QSNEWTDSF  249 (313)
T ss_pred             CCCCCCCCC------hHHHHHHHHh--cCCCCC--------------------------------------CccccCHHH
Confidence            999987533      2222222211  000000                                      011223456


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+|+.+||+.+|.+|||+.++++||||+.
T Consensus       250 ~~li~~~l~~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         250 RGFVDYCLQKIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence            89999999999999999999999999973

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.90  E-value=4.3e-24  Score=164.13  Aligned_cols=139  Identities=23%  Similarity=0.300  Sum_probs=105.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+.++|+|++++||++..++.++++|||++......   .....++..|+|||.+.+..++.++|+||+||++++++
T Consensus       116 ~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  195 (277)
T cd06642         116 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA  195 (277)
T ss_pred             HHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHH
Confidence            356667799999999999999999999999999766432   22346788899999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||....      .......+.   ...+.                                      ......+..
T Consensus       196 tg~~p~~~~~------~~~~~~~~~---~~~~~--------------------------------------~~~~~~~~~  228 (277)
T cd06642         196 KGEPPNSDLH------PMRVLFLIP---KNSPP--------------------------------------TLEGQYSKP  228 (277)
T ss_pred             hCCCCCcccc------hhhHHhhhh---cCCCC--------------------------------------CCCcccCHH
Confidence            9999986322      111110000   00000                                      011223456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+++.+||+.+|++|||+.++++||||+
T Consensus       229 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06642         229 FKEFVEACLNKDPRFRPTAKELLKHKFIT  257 (277)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHhHHHH
Confidence            78999999999999999999999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.90  E-value=1.9e-23  Score=158.80  Aligned_cols=139  Identities=21%  Similarity=0.268  Sum_probs=106.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|.++++|+|++++||+++.++.++|+|||.+......  .....|+..|+|||.+.+..++.++|+||+|++++++++|
T Consensus       116 lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g  195 (258)
T cd05578         116 LHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRG  195 (258)
T ss_pred             HHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhC
Confidence            56666799999999999999999999999998766432  2334678889999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+..    ....+...... ..                                        ...+...+..+.
T Consensus       196 ~~p~~~~~~~----~~~~~~~~~~~-~~----------------------------------------~~~~~~~~~~~~  230 (258)
T cd05578         196 KRPYRGHSRT----IRDQIRAKQET-AD----------------------------------------VLYPATWSTEAI  230 (258)
T ss_pred             CCCCCCCCcc----HHHHHHHHhcc-cc----------------------------------------ccCcccCcHHHH
Confidence            9999754321    11111111110 00                                        001223346778


Q ss_pred             HHHHHccccCCCCCCCH--HHHhcCCCC
Q psy16751        187 EFLRPMLAYDPKLRATA--ADCLQHPWL  212 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~--~e~l~hp~f  212 (214)
                      ++|.+||+.||.+|+++  +|+++||||
T Consensus       231 ~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         231 DAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            99999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=7.4e-24  Score=162.71  Aligned_cols=141  Identities=21%  Similarity=0.290  Sum_probs=104.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|...++|+|++++||+++.++.++|+|||.+......   .....|+..|+|||.+.+. .++.++|+||+||+++++
T Consensus       116 ~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l  195 (277)
T cd06917         116 YIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEM  195 (277)
T ss_pred             HHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHH
Confidence            356667799999999999999999999999999876432   2334788899999998754 578899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+..      .......+.   ...+                       +..              .....+.
T Consensus       196 l~g~~p~~~~~------~~~~~~~~~---~~~~-----------------------~~~--------------~~~~~~~  229 (277)
T cd06917         196 ATGNPPYSDVD------AFRAMMLIP---KSKP-----------------------PRL--------------EDNGYSK  229 (277)
T ss_pred             HhCCCCCCCCC------hhhhhhccc---cCCC-----------------------CCC--------------CcccCCH
Confidence            99999996432      111000000   0000                       000              0011345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.+++.+||+.||++|||+.+++.||||++
T Consensus       230 ~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~  260 (277)
T cd06917         230 LLREFVAACLDEEPKERLSAEELLKSKWIKA  260 (277)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence            6789999999999999999999999999964

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.90  E-value=2.3e-23  Score=158.10  Aligned_cols=138  Identities=22%  Similarity=0.336  Sum_probs=103.2

Q ss_pred             cccccccccccccccccccCCCc-ceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|...++|+|+++.||+++.++ .++++|||.+......   .....|++.|+|||.+.+..++.++|+||+|++++++
T Consensus       116 ~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l  195 (257)
T cd08225         116 HIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL  195 (257)
T ss_pred             HHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            35666679999999999998875 5699999998766432   2234688889999999888899999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||...+      .......+..  +..+                                       ......+.
T Consensus       196 ~~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~  228 (257)
T cd08225         196 CTLKHPFEGNN------LHQLVLKICQ--GYFA---------------------------------------PISPNFSR  228 (257)
T ss_pred             HhCCCCCCCcc------HHHHHHHHhc--ccCC---------------------------------------CCCCCCCH
Confidence            99999986422      1111111110  0000                                       00122344


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ++.+++.+||+.+|++|||+.++++||||
T Consensus       229 ~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         229 DLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            67899999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=1e-23  Score=162.47  Aligned_cols=134  Identities=10%  Similarity=0.147  Sum_probs=102.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++|+|++++.++.++|+|||++......     .....+++.|+|||.+.+..++.++|+||+||+++++
T Consensus       140 lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el  219 (283)
T cd05048         140 LSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI  219 (283)
T ss_pred             HHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHH
Confidence            56667799999999999999999999999999865322     2234667889999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..      ..+....+..  +..                                       ...+..++
T Consensus       220 ~~~g~~p~~~~~------~~~~~~~i~~--~~~---------------------------------------~~~~~~~~  252 (283)
T cd05048         220 FSYGLQPYYGFS------NQEVIEMIRS--RQL---------------------------------------LPCPEDCP  252 (283)
T ss_pred             HcCCCCCCCCCC------HHHHHHHHHc--CCc---------------------------------------CCCcccCC
Confidence            97 988987533      1121111110  000                                       00123455


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+|+.+||+.||.+|||+.+++++
T Consensus       253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         253 ARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            678899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG1035|consensus

Probab=99.90  E-value=9.9e-24  Score=179.96  Aligned_cols=164  Identities=20%  Similarity=0.336  Sum_probs=116.2

Q ss_pred             cchhhhhccCchh-hhhHHHHHH---hhhccccc--ccccccccccccccCCCcceEEeecCCceecc------------
Q psy16751          3 SIFNFFVAFGSLE-ETDKKRRLY---IRNACWVD--KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD------------   64 (214)
Q Consensus         3 ~l~~~~~~~~~~~-~~d~k~~~~---~~~~~~~~--~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~------------   64 (214)
                      ++...+...++.- -+|.-..+|   ++.+.|+|  .++|||+||.||.+++++.|||+|||+|....            
T Consensus       681 ~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~  760 (1351)
T KOG1035|consen  681 TLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSF  760 (1351)
T ss_pred             hHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCc
Confidence            3444555555554 455555666   45554444  44999999999999999999999999998720            


Q ss_pred             ---------CCCCCCCcCCcccchHHHhcCC---CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHH-
Q psy16751         65 ---------KHFTEDVQTRQYRSLEVLINAG---YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIEL-  131 (214)
Q Consensus        65 ---------~~~~~~~~~~~y~aPE~~~~~~---~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~-  131 (214)
                               ...+..+||..|.|||++.+..   |+.++|+||+|++++||+..   |.+        .++....+..+ 
T Consensus       761 ~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~T--------sMERa~iL~~LR  829 (1351)
T KOG1035|consen  761 STNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGT--------SMERASILTNLR  829 (1351)
T ss_pred             cccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCc--------hHHHHHHHHhcc
Confidence                     1234569999999999998764   99999999999999999955   643        34444433222 


Q ss_pred             hCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        132 LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       132 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      -|.+|..                        +            ....+..+.-..+|+.||+.||++||||.|+|++.|
T Consensus       830 ~g~iP~~------------------------~------------~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~l  873 (1351)
T KOG1035|consen  830 KGSIPEP------------------------A------------DFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSEL  873 (1351)
T ss_pred             cCCCCCC------------------------c------------ccccccchHHHHHHHHHhcCCCccCCCHHHHhhccC
Confidence            1222211                        0            011222233468999999999999999999999999


Q ss_pred             CC
Q psy16751        212 LQ  213 (214)
Q Consensus       212 f~  213 (214)
                      |.
T Consensus       874 lp  875 (1351)
T KOG1035|consen  874 LP  875 (1351)
T ss_pred             CC
Confidence            85

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.90  E-value=1.1e-23  Score=164.19  Aligned_cols=139  Identities=21%  Similarity=0.298  Sum_probs=103.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc---CCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN---AGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|+++.||+++.++.++|+|||++...... ....++..|+|||++.+   ..++.++||||+|+++++++
T Consensus       130 ~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~  208 (307)
T cd06607         130 YLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  208 (307)
T ss_pred             HHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHH
Confidence            356666799999999999999999999999998755433 34578889999999853   35888999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+..  +.++.                        .              .....+..
T Consensus       209 tg~~p~~~~~------~~~~~~~~~~--~~~~~------------------------~--------------~~~~~~~~  242 (307)
T cd06607         209 ERKPPLFNMN------AMSALYHIAQ--NDSPT------------------------L--------------SSNDWSDY  242 (307)
T ss_pred             cCCCCCCCcc------HHHHHHHHhc--CCCCC------------------------C--------------CchhhCHH
Confidence            9999986432      1111111110  00000                        0              01123456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+++.+||..+|++|||+.++++||||.
T Consensus       243 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~  271 (307)
T cd06607         243 FRNFVDSCLQKIPQDRPSSEELLKHRFVL  271 (307)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence            78999999999999999999999999996

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=5.1e-24  Score=165.08  Aligned_cols=142  Identities=20%  Similarity=0.256  Sum_probs=106.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|++++|+++..++.++|+|||.+......   .....+++.|++||.+.+..++.++|+||+||++++++
T Consensus       130 ~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll  209 (293)
T cd06647         130 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV  209 (293)
T ss_pred             HHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHH
Confidence            467777799999999999999999999999998765432   22346888899999998888899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+.      ..++..+..  +..+                        .             ...+...+..
T Consensus       210 ~g~~pf~~~~~------~~~~~~~~~--~~~~------------------------~-------------~~~~~~~~~~  244 (293)
T cd06647         210 EGEPPYLNENP------LRALYLIAT--NGTP------------------------E-------------LQNPEKLSAI  244 (293)
T ss_pred             hCCCCCCCCCh------hhheeehhc--CCCC------------------------C-------------CCCccccCHH
Confidence            99999964331      111110000  0000                        0             0011223456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+++.+||..+|.+||++.+++.||||++
T Consensus       245 l~~li~~~l~~~p~~Rp~~~~il~h~~~~~  274 (293)
T cd06647         245 FRDFLNRCLEMDVEKRGSAKELLQHPFLKI  274 (293)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence            789999999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.90  E-value=2e-23  Score=162.85  Aligned_cols=138  Identities=22%  Similarity=0.280  Sum_probs=104.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc---CCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN---AGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|....+|+|+++.||++..++.++|+|||++...... ....++..|+|||.+.+   ..++.++||||+||+++++++
T Consensus       131 LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  209 (308)
T cd06634         131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  209 (308)
T ss_pred             HHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc
Confidence            56667799999999999999999999999998765433 33468889999999864   357889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      .......+.+  +..+.                                      ......+..+
T Consensus       210 g~~p~~~~~------~~~~~~~~~~--~~~~~--------------------------------------~~~~~~~~~~  243 (308)
T cd06634         210 RKPPLFNMN------AMSALYHIAQ--NESPA--------------------------------------LQSGHWSEYF  243 (308)
T ss_pred             CCCCCcccc------HHHHHHHHhh--cCCCC--------------------------------------cCcccccHHH
Confidence            999986432      1122211111  00000                                      0012344567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+|+.+||+.+|.+|||++++++|||+.
T Consensus       244 ~~li~~cl~~~P~~Rp~~~~ll~~~~~~  271 (308)
T cd06634         244 RNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (308)
T ss_pred             HHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence            8999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.7e-23  Score=156.57  Aligned_cols=138  Identities=22%  Similarity=0.341  Sum_probs=106.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+.++|+|+++.||++..++.++|+|||.+.......   ....++..|+|||...+..++.++|+||+|+++++++
T Consensus       114 ~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~  193 (254)
T cd06627         114 YLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL  193 (254)
T ss_pred             HHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH
Confidence            3677778999999999999999999999999998775432   2346788999999998878889999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+..  +..                                       ...+...+..
T Consensus       194 ~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~~~~  226 (254)
T cd06627         194 TGNPPYYDLN------PMAALFRIVQ--DDH---------------------------------------PPLPEGISPE  226 (254)
T ss_pred             hCCCCCCCcc------HHHHHHHHhc--cCC---------------------------------------CCCCCCCCHH
Confidence            9999986422      1121111110  000                                       0012233456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+++.+||..+|++|||+.+++.||||
T Consensus       227 ~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         227 LKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            7899999999999999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0607|consensus

Probab=99.90  E-value=2e-23  Score=156.35  Aligned_cols=148  Identities=20%  Similarity=0.278  Sum_probs=105.6

Q ss_pred             cccccccccccccccccccCCC---cceEEeecCCceec--cC--------CCCCCCcCCcccchHHHhc---C--CCCc
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPP---FLFDIGTYRNACWV--DK--------HFTEDVQTRQYRSLEVLIN---A--GYDC   89 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~---~~~kl~Dfg~a~~~--~~--------~~~~~~~~~~y~aPE~~~~---~--~~~~   89 (214)
                      .+|-..+.|||+||+|||....   .-|||+||.+..-.  ..        ...+.+|+..|||||+..-   .  -|+.
T Consensus       191 FlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDK  270 (463)
T KOG0607|consen  191 FLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDK  270 (463)
T ss_pred             HHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccc
Confidence            5777778899999999997553   57899998876543  11        1234589999999999863   2  4899


Q ss_pred             chhhHHHHHHHHHHhhCCCCCCCCCCC----CCCCcHH-----HHHHHHHHhCCCChHHhhccCCccccccccCccccCC
Q psy16751         90 SADIWSVACMAFELATGDYLFEPHAGD----TYTRDED-----HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP  160 (214)
Q Consensus        90 ~~Diws~G~~l~~l~~g~~~f~~~~~~----~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (214)
                      .+|.||+|||+|-|++|++||.+..+.    +....-.     .+..|.+---.+|.+.                     
T Consensus       271 rCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd---------------------  329 (463)
T KOG0607|consen  271 RCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD---------------------  329 (463)
T ss_pred             cccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhh---------------------
Confidence            999999999999999999999876432    2211111     1111111111111111                     


Q ss_pred             CCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        161 GLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                       ....+.+.+|+++++|..++.+|.+|.++++|||++
T Consensus       330 -----------------WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~  365 (463)
T KOG0607|consen  330 -----------------WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ  365 (463)
T ss_pred             -----------------hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence                             124466788999999999999999999999999996

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.89  E-value=2.5e-23  Score=160.57  Aligned_cols=142  Identities=23%  Similarity=0.318  Sum_probs=106.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|..+++|+|++|+||+++.++.++|+|||.+......   .....++..|++||.+.+..++.++|+||+||++++++
T Consensus       131 ~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~  210 (286)
T cd06614         131 YLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA  210 (286)
T ss_pred             HHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHH
Confidence            356677899999999999999999999999998655432   22345778899999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+..  +..+.                                     .......+..
T Consensus       211 ~g~~p~~~~~------~~~~~~~~~~--~~~~~-------------------------------------~~~~~~~~~~  245 (286)
T cd06614         211 EGEPPYLREP------PLRALFLITT--KGIPP-------------------------------------LKNPEKWSPE  245 (286)
T ss_pred             hCCCCCCCCC------HHHHHHHHHh--cCCCC-------------------------------------CcchhhCCHH
Confidence            9999986422      1111111110  00000                                     0001123456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||+.+|.+|||+.+++.||||++
T Consensus       246 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         246 FKDFLNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence            789999999999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.89  E-value=1.5e-23  Score=165.43  Aligned_cols=136  Identities=13%  Similarity=0.144  Sum_probs=100.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|...++|+|+||.||+++.++.++|+|||+++.....     .....++..|+|||.+.+..++.++||||+||++++
T Consensus       188 ~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~e  267 (337)
T cd05054         188 FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWE  267 (337)
T ss_pred             HHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHH
Confidence            356677799999999999999999999999999875322     122345677999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      ..+.+...... +..+                                       ..+...
T Consensus       268 l~t~g~~p~~~~~------~~~~~~~~~~~-~~~~---------------------------------------~~~~~~  301 (337)
T cd05054         268 IFSLGASPYPGVQ------IDEEFCRRLKE-GTRM---------------------------------------RAPEYA  301 (337)
T ss_pred             HHHcCCCCCCCCC------ccHHHHHHHhc-cCCC---------------------------------------CCCccC
Confidence            997 988986422      11222111110 0000                                       011223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..++.+++.+||+.+|++|||++|+++|
T Consensus       302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         302 TPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            4567899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.89  E-value=4.7e-23  Score=159.36  Aligned_cols=167  Identities=17%  Similarity=0.210  Sum_probs=117.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~   74 (214)
                      +|.+++.....+....+...+.  +.  ..+|...++|+|++++||+++.++.++|+|||++......    .....|+.
T Consensus        91 ~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  170 (290)
T cd05613          91 ELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTI  170 (290)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCc
Confidence            4667776666665555543321  22  2366677799999999999999999999999999766432    12346888


Q ss_pred             cccchHHHhcC--CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHh-CCCChHHhhccCCcccccc
Q psy16751         75 QYRSLEVLINA--GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL-GDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        75 ~y~aPE~~~~~--~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~  151 (214)
                      .|+|||.+.+.  .++.++|+||+|++++++++|..||.....      ......+.+.. ...+               
T Consensus       171 ~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~------~~~~~~~~~~~~~~~~---------------  229 (290)
T cd05613         171 EYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE------KNSQAEISRRILKSEP---------------  229 (290)
T ss_pred             ccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc------cccHHHHHHHhhccCC---------------
Confidence            99999999864  467899999999999999999999863221      11111111110 0000               


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                              ..+...+..+.+++.+||+.||++|+     ++++++.||||+.
T Consensus       230 ------------------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  273 (290)
T cd05613         230 ------------------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK  273 (290)
T ss_pred             ------------------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence                                    01223445678999999999999997     8999999999973

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.89  E-value=4.9e-23  Score=159.11  Aligned_cols=168  Identities=17%  Similarity=0.197  Sum_probs=114.0

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhhh--cccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~   74 (214)
                      +|++++.....+....++..+  .++.  .+|....+|+|+++.||+++.++.++|+|||+++......    ....|+.
T Consensus        91 ~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  170 (288)
T cd05583          91 ELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTI  170 (288)
T ss_pred             cHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCc
Confidence            345555554544444443321  1222  3566667999999999999999999999999987653321    2235788


Q ss_pred             cccchHHHhcCC--CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         75 QYRSLEVLINAG--YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        75 ~y~aPE~~~~~~--~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      .|++||.+.+..  .+.++|+||+|++++++++|..||...+...  ...+....+....                    
T Consensus       171 ~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~--------------------  228 (288)
T cd05583         171 EYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKSK--------------------  228 (288)
T ss_pred             cccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHccC--------------------
Confidence            999999988764  7789999999999999999999986322100  0111111111000                    


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC---HHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT---AADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t---~~e~l~hp~f~~  214 (214)
                                            ...+...+..+.+++.+||+.||++|||   +.++|+||||++
T Consensus       229 ----------------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~  271 (288)
T cd05583         229 ----------------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG  271 (288)
T ss_pred             ----------------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence                                  0012234456789999999999999998   567799999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=2.3e-23  Score=160.13  Aligned_cols=134  Identities=15%  Similarity=0.205  Sum_probs=100.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++|.||+++.++.++|+|||.+......     .....+++.|+|||++.+..++.++||||+||++++
T Consensus       137 ~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  216 (280)
T cd05049         137 YLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWE  216 (280)
T ss_pred             HHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHH
Confidence            356667799999999999999999999999999765321     223355678999999999899999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      .......+..  +..+                                       ..+...
T Consensus       217 ~~~~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~  249 (280)
T cd05049         217 IFTYGKQPWYGLS------NEEVIECITQ--GRLL---------------------------------------QRPRTC  249 (280)
T ss_pred             HHhcCCCCCCCCC------HHHHHHHHHc--CCcC---------------------------------------CCCCCC
Confidence            998 999986433      1222221110  1000                                       011233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         250 PSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            456789999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=3.2e-23  Score=159.66  Aligned_cols=134  Identities=13%  Similarity=0.133  Sum_probs=100.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|+||.|+++..++.+||+|||+++.....     .....+++.|+|||.+.+..++.++||||+||+++++
T Consensus       140 lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  219 (283)
T cd05091         140 LSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV  219 (283)
T ss_pred             HHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence            55666799999999999999999999999998765322     2233556789999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..      ..+.+..+...  ..                                       ...+..++
T Consensus       220 ~~~g~~p~~~~~------~~~~~~~i~~~--~~---------------------------------------~~~~~~~~  252 (283)
T cd05091         220 FSYGLQPYCGYS------NQDVIEMIRNR--QV---------------------------------------LPCPDDCP  252 (283)
T ss_pred             HcCCCCCCCCCC------HHHHHHHHHcC--Cc---------------------------------------CCCCCCCC
Confidence            97 777886432      22222222110  00                                       00123455


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+|+.+||+.+|++|||++++++.
T Consensus       253 ~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         253 AWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            667899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.89  E-value=2e-23  Score=160.38  Aligned_cols=140  Identities=22%  Similarity=0.290  Sum_probs=106.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|...++|+|+++.|++++.++.++++|||++......   .....++..|+|||.+.+..++.++|+||+||++++++
T Consensus       116 ~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~  195 (277)
T cd06641         116 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA  195 (277)
T ss_pred             HHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence            356777799999999999999999999999998766432   22346788899999998878889999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||....      .......+..  +..+                                       ..+...+.+
T Consensus       196 ~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  228 (277)
T cd06641         196 KGEPPHSELH------PMKVLFLIPK--NNPP---------------------------------------TLEGNYSKP  228 (277)
T ss_pred             cCCCCCCccc------hHHHHHHHhc--CCCC---------------------------------------CCCcccCHH
Confidence            9999986322      1111111100  0000                                       011233456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+++.+||+.+|++||++.++++||||++
T Consensus       229 ~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~  258 (277)
T cd06641         229 LKEFVEACLNKEPSFRPTAKELLKHKFIVR  258 (277)
T ss_pred             HHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence            789999999999999999999999999963

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.89  E-value=2.4e-23  Score=157.83  Aligned_cols=138  Identities=23%  Similarity=0.350  Sum_probs=106.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|....+|+|+++.|++++.++.++|+|||.+......   .....|++.|+|||...+..++.++|+||+|+++++++
T Consensus       118 ~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~  197 (258)
T cd08215         118 YLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC  197 (258)
T ss_pred             HHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHH
Confidence            466667799999999999999999999999999876543   23347888999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .........+  +..+                                       ..+...+..
T Consensus       198 ~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  230 (258)
T cd08215         198 TLKHPFEGEN------LLELALKILK--GQYP---------------------------------------PIPSQYSSE  230 (258)
T ss_pred             cCCCCCCCCc------HHHHHHHHhc--CCCC---------------------------------------CCCCCCCHH
Confidence            9999986322      1111111110  0000                                       011233456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+++.+||..+|++|||+.++|+||||
T Consensus       231 ~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         231 LRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            7899999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=5.9e-23  Score=156.75  Aligned_cols=138  Identities=20%  Similarity=0.286  Sum_probs=104.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|...++|+|++++||+++.++.++|+|||.++.....      .....++..|+|||.+.+..++.++|+||+||+++
T Consensus       121 ~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  200 (264)
T cd06653         121 YLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVV  200 (264)
T ss_pred             HHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHH
Confidence            356667799999999999999999999999999865321      12346888999999999888899999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||....      ...   .+.+....+...                                     ..+...
T Consensus       201 ~l~~g~~p~~~~~------~~~---~~~~~~~~~~~~-------------------------------------~~p~~~  234 (264)
T cd06653         201 EMLTEKPPWAEYE------AMA---AIFKIATQPTKP-------------------------------------MLPDGV  234 (264)
T ss_pred             HHHhCCCCCCccC------HHH---HHHHHHcCCCCC-------------------------------------CCCccc
Confidence            9999999996322      122   222221111100                                     123445


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +..+.+++.+||+ +|..|||+.+++.|||+
T Consensus       235 ~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         235 SDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             CHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            5677899999999 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.89  E-value=2.9e-23  Score=166.02  Aligned_cols=134  Identities=12%  Similarity=0.127  Sum_probs=98.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+||.||+++.++.+||+|||+++......     ....++..|+|||++.+..++.++||||+||+++++
T Consensus       228 LH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~el  307 (374)
T cd05106         228 LASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI  307 (374)
T ss_pred             HHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHH
Confidence            566677999999999999999999999999998654321     122345679999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ....+..+......+                                        ..+...+
T Consensus       308 lt~G~~Pf~~~~------~~~~~~~~~~~~~~~----------------------------------------~~~~~~~  341 (374)
T cd05106         308 FSLGKSPYPGIL------VNSKFYKMVKRGYQM----------------------------------------SRPDFAP  341 (374)
T ss_pred             HhCCCCCCcccc------ccHHHHHHHHcccCc----------------------------------------cCCCCCC
Confidence            97 999996432      111122221110000                                        0112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+++.+||+.||++|||+.++++
T Consensus       342 ~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         342 PEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            56789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.89  E-value=4.3e-23  Score=161.52  Aligned_cols=134  Identities=15%  Similarity=0.186  Sum_probs=99.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC-----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..+++|+|+|++||++..++.+||+|||+++.......     ...++..|+|||.+.+..++.++||||+||+++++
T Consensus       125 LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el  204 (316)
T cd05108         125 LEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL  204 (316)
T ss_pred             HHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHH
Confidence            5667779999999999999999999999999987643211     12335679999999988999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..       ...+..+......+                                        ..+..++
T Consensus       205 ~t~g~~p~~~~~-------~~~~~~~~~~~~~~----------------------------------------~~~~~~~  237 (316)
T cd05108         205 MTFGSKPYDGIP-------ASEISSILEKGERL----------------------------------------PQPPICT  237 (316)
T ss_pred             HcCCCCCCCCCC-------HHHHHHHHhCCCCC----------------------------------------CCCCCCC
Confidence            87 888886422       22222222110000                                        0112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+++.+||..+|.+|||+.+++.+
T Consensus       238 ~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         238 IDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            467899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.89  E-value=7.1e-23  Score=155.70  Aligned_cols=159  Identities=11%  Similarity=0.116  Sum_probs=109.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~   72 (214)
                      +|.+++.....+....+...+.  +.  ..+|...++|+|++|.|+++..++.+||+|||.+.......      ....+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW  160 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence            4555655544443333322111  12  23566777999999999999999999999999998664321      12233


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      +..|+|||.+.+..++.++|+||+||+++++++ |..||...+      ..+....+.+  +..+               
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~i~~--~~~~---------------  217 (257)
T cd05116         161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK------GNEVTQMIES--GERM---------------  217 (257)
T ss_pred             CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHC--CCCC---------------
Confidence            568999999987788999999999999999997 899996433      2222222211  0000               


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                              ..+...+.++.++|.+||+.||++|||+.++.+
T Consensus       218 ------------------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         218 ------------------------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             ------------------------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence                                    012234557789999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.89  E-value=5.6e-23  Score=160.00  Aligned_cols=140  Identities=14%  Similarity=0.186  Sum_probs=99.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|+||.||+++.++.+||+|||+++.....     .....++..|+|||++.+..++.++||||+||+++++
T Consensus       154 lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  233 (304)
T cd05096         154 LSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI  233 (304)
T ss_pred             HHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence            56667799999999999999999999999999865332     1223456789999999988899999999999999999


Q ss_pred             hh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        104 AT--GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       104 ~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++  +..||...+      ..+.+..+...+......         .                         ....++.+
T Consensus       234 ~~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~  273 (304)
T cd05096         234 LMLCKEQPYGELT------DEQVIENAGEFFRDQGRQ---------V-------------------------YLFRPPPC  273 (304)
T ss_pred             HHccCCCCCCcCC------HHHHHHHHHHHhhhcccc---------c-------------------------cccCCCCC
Confidence            86  456675432      222222221111000000         0                         00012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||..||++|||+.++.+
T Consensus       274 ~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         274 PQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            567789999999999999999999853

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.89  E-value=1.3e-22  Score=154.16  Aligned_cols=134  Identities=16%  Similarity=0.215  Sum_probs=102.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+||+++.++.++|+|||.+......     .....++..|+|||.+.+..++.++|+||+||+++++
T Consensus       121 lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  200 (262)
T cd00192         121 LASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEI  200 (262)
T ss_pred             HHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHH
Confidence            66677799999999999999999999999999877542     2334677889999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ..+....+..  +.                                       ....+...+
T Consensus       201 ~~~g~~p~~~~~------~~~~~~~~~~--~~---------------------------------------~~~~~~~~~  233 (262)
T cd00192         201 FTLGATPYPGLS------NEEVLEYLRK--GY---------------------------------------RLPKPEYCP  233 (262)
T ss_pred             HhcCCCCCCCCC------HHHHHHHHHc--CC---------------------------------------CCCCCccCC
Confidence            98 588886432      2222221111  00                                       001123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+++.+||+.+|++|||+.|++++
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         234 DELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             hHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            678899999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.89  E-value=9.3e-23  Score=156.85  Aligned_cols=133  Identities=16%  Similarity=0.218  Sum_probs=98.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC-----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++|+||++..++.+||+|||+++.......     ...++..|+|||.+.+..++.++||||+||+++|+
T Consensus       125 lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el  204 (279)
T cd05109         125 LEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWEL  204 (279)
T ss_pred             HHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHH
Confidence            6667779999999999999999999999999987643211     12345679999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....       ...+.........++                                        .+...+
T Consensus       205 ~t~g~~p~~~~~-------~~~~~~~~~~~~~~~----------------------------------------~~~~~~  237 (279)
T cd05109         205 MTFGAKPYDGIP-------AREIPDLLEKGERLP----------------------------------------QPPICT  237 (279)
T ss_pred             HcCCCCCCCCCC-------HHHHHHHHHCCCcCC----------------------------------------CCccCC
Confidence            88 888885322       222222221110100                                        112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+++.+||+.||++|||+.++++
T Consensus       238 ~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         238 IDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            56789999999999999999999884

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.89  E-value=4.2e-23  Score=160.24  Aligned_cols=135  Identities=12%  Similarity=0.107  Sum_probs=99.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCC--CcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTED--VQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.+.++|+|++|.|++++.++.+||+|||++..........  ..+..|+|||.+.+..++.++||||+||+++++++
T Consensus       134 ~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t  213 (297)
T cd05089         134 YLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS  213 (297)
T ss_pred             HHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHc
Confidence            3666777999999999999999999999999987543322222  23456999999988889999999999999999997


Q ss_pred             -CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        106 -GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       106 -g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                       |..||....      .......+.+.  ..                                       ...+..++..
T Consensus       214 ~g~~pf~~~~------~~~~~~~~~~~--~~---------------------------------------~~~~~~~~~~  246 (297)
T cd05089         214 LGGTPYCGMT------CAELYEKLPQG--YR---------------------------------------MEKPRNCDDE  246 (297)
T ss_pred             CCCCCCCCCC------HHHHHHHHhcC--CC---------------------------------------CCCCCCCCHH
Confidence             989986432      11111111100  00                                       0012234456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +.+|+.+||+.+|.+|||++++++.
T Consensus       247 ~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         247 VYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7899999999999999999999753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.89  E-value=5.6e-23  Score=156.16  Aligned_cols=134  Identities=10%  Similarity=0.119  Sum_probs=100.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-C
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-G  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g  106 (214)
                      .+|.+.++|+|++|+||+++.++.+||+|||++...........++..|+|||++.+..++.++|+||+||+++++++ |
T Consensus       117 ~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g  196 (256)
T cd05082         117 YLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG  196 (256)
T ss_pred             HHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCC
Confidence            356677799999999999999999999999999876554444455667999999988889999999999999999997 8


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+       ...+...... +..                                       ...++.++..+.
T Consensus       197 ~~p~~~~~-------~~~~~~~~~~-~~~---------------------------------------~~~~~~~~~~~~  229 (256)
T cd05082         197 RVPYPRIP-------LKDVVPRVEK-GYK---------------------------------------MDAPDGCPPVVY  229 (256)
T ss_pred             CCCCCCCC-------HHHHHHHHhc-CCC---------------------------------------CCCCCCCCHHHH
Confidence            88886322       1211111100 000                                       001123455778


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +++.+||+.+|++|||+.++++
T Consensus       230 ~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         230 DVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=6.9e-23  Score=158.34  Aligned_cols=140  Identities=16%  Similarity=0.324  Sum_probs=103.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++|+||++..++.++|+|||+++.....     .....++..|+|||.+.+..++.++|+||+||++++
T Consensus       134 ~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~e  213 (288)
T cd05061         134 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE  213 (288)
T ss_pred             HHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHH
Confidence            366777899999999999999999999999998765321     112245667999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      ..+....+..  +..+                                       ..+..+
T Consensus       214 l~~~~~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~  246 (288)
T cd05061         214 ITSLAEQPYQGLS------NEQVLKFVMD--GGYL---------------------------------------DQPDNC  246 (288)
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHc--CCCC---------------------------------------CCCCCC
Confidence            998 677886422      1221111110  0000                                       011223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc------CCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ------HPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~------hp~f~~  214 (214)
                      +..+.+++.+||+.||++|||+.++++      ||||+.
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         247 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            457789999999999999999999986      999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.89  E-value=7.7e-23  Score=156.19  Aligned_cols=138  Identities=20%  Similarity=0.217  Sum_probs=103.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+.++|+|++++||+++.++.++|+|||.+.......   ....|++.|+|||.+.+..++.++|+||+|+++++++
T Consensus       121 ~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~  200 (267)
T cd08228         121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA  200 (267)
T ss_pred             HHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHh
Confidence            3667777999999999999999999999999988764322   2346888999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.....     ....+.......+.++.                                       .....+..
T Consensus       201 ~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~  236 (267)
T cd08228         201 ALQSPFYGDKM-----NLFSLCQKIEQCDYPPL---------------------------------------PTEHYSEK  236 (267)
T ss_pred             cCCCCCccccc-----cHHHHHHHHhcCCCCCC---------------------------------------ChhhcCHH
Confidence            99999864321     11122222111111100                                       01223456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +.+++.+||+.+|++|||+.++++.
T Consensus       237 ~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         237 LRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHHHHCCCCcccCcCHHHHHHH
Confidence            7899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.89  E-value=1e-22  Score=155.00  Aligned_cols=136  Identities=26%  Similarity=0.437  Sum_probs=102.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++|+++.. +.++|+|||.+......   .....|++.|+|||...+..++.++|+||+|++++++++
T Consensus       122 lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~  200 (260)
T cd08222         122 MHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC  200 (260)
T ss_pred             HHHcCccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence            56667799999999999974 67999999998766332   223467888999999988888999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..+|....      .......+..  +..+                                       ..+...+.++
T Consensus       201 ~~~~~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~~  233 (260)
T cd08222         201 LAHAFEGQN------FLSVVLRIVE--GPTP---------------------------------------SLPETYSRQL  233 (260)
T ss_pred             CCCCCCCcc------HHHHHHHHHc--CCCC---------------------------------------CCcchhcHHH
Confidence            999985322      1111111110  1110                                       0123345577


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      .+++.+||+.+|++||++.++++||||
T Consensus       234 ~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         234 NSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            899999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.89  E-value=8.1e-23  Score=160.05  Aligned_cols=138  Identities=20%  Similarity=0.230  Sum_probs=104.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc---CCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN---AGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.+.++|+|+++.||++..++.++|+|||++..... .....|+..|+|||.+.+   ..++.++|+||+||+++++++
T Consensus       141 lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~  219 (317)
T cd06635         141 LHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  219 (317)
T ss_pred             HHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHh
Confidence            5666679999999999999999999999999865433 234578889999999853   357889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      ....+..+... +.++                                       ......+..+
T Consensus       220 g~~p~~~~~------~~~~~~~~~~~-~~~~---------------------------------------~~~~~~~~~l  253 (317)
T cd06635         220 RKPPLFNMN------AMSALYHIAQN-ESPT---------------------------------------LQSNEWSDYF  253 (317)
T ss_pred             CCCCCCCcc------HHHHHHHHHhc-cCCC---------------------------------------CCCccccHHH
Confidence            999986432      22222222211 0000                                       0012234567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+++.+||+.+|.+|||+.++++|+|+.
T Consensus       254 ~~li~~~l~~~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         254 RNFVDSCLQKIPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             HHHHHHHccCCcccCcCHHHHHhChhhh
Confidence            8999999999999999999999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=4.8e-23  Score=159.21  Aligned_cols=133  Identities=14%  Similarity=0.229  Sum_probs=99.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|.||+++.++.++|+|||.++.....     .....++..|+|||.+.+..++.++|+||+||+++++
T Consensus       136 lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l  215 (288)
T cd05093         136 LASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI  215 (288)
T ss_pred             HHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            56677799999999999999999999999999865332     1223456789999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |.+||....      ....+..+..  +..+                                       ..+...+
T Consensus       216 ~t~g~~p~~~~~------~~~~~~~i~~--~~~~---------------------------------------~~~~~~~  248 (288)
T cd05093         216 FTYGKQPWYQLS------NNEVIECITQ--GRVL---------------------------------------QRPRTCP  248 (288)
T ss_pred             HhCCCCCCCCCC------HHHHHHHHHc--CCcC---------------------------------------CCCCCCC
Confidence            98 888886433      2222222211  1000                                       0112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+|+.+||+.||.+|||+.+++.
T Consensus       249 ~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         249 KEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHH
Confidence            56789999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.89  E-value=1.9e-22  Score=155.21  Aligned_cols=133  Identities=13%  Similarity=0.200  Sum_probs=98.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|....+|+|+++.|++++.++.+||+|||.++.....     .....++..|++||.+.+..++.++|+||+||+++|+
T Consensus       125 lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el  204 (279)
T cd05111         125 LEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEM  204 (279)
T ss_pred             HHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHH
Confidence            56666799999999999999999999999999865321     2233466789999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..       ...+..+.+. +..+.                                       .+..++
T Consensus       205 ~t~g~~p~~~~~-------~~~~~~~~~~-~~~~~---------------------------------------~~~~~~  237 (279)
T cd05111         205 MSYGAEPYAGMR-------PHEVPDLLEK-GERLA---------------------------------------QPQICT  237 (279)
T ss_pred             HcCCCCCCCCCC-------HHHHHHHHHC-CCcCC---------------------------------------CCCCCC
Confidence            98 988886422       1222222111 00000                                       011223


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+|+..||++|||+.|+++
T Consensus       238 ~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         238 IDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            45678999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG4236|consensus

Probab=99.88  E-value=1.5e-24  Score=171.81  Aligned_cols=140  Identities=21%  Similarity=0.319  Sum_probs=112.2

Q ss_pred             ccccccccccccccccccCCC---cceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPP---FLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~---~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|-.+++|.|+||+|+|+...   -.+||+|||.|++.++.  ....+|||.|.|||++...+|+.+.|+||+||++|-.
T Consensus       680 LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVs  759 (888)
T KOG4236|consen  680 LHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVS  759 (888)
T ss_pred             hhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEE
Confidence            666778999999999998664   48999999999999754  5667999999999999999999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||..+..     -.+|+.+.. .+ -||.                                       ...+.+.
T Consensus       760 LSGTFPFNEdEd-----IndQIQNAa-FM-yPp~---------------------------------------PW~eis~  793 (888)
T KOG4236|consen  760 LSGTFPFNEDED-----INDQIQNAA-FM-YPPN---------------------------------------PWSEISP  793 (888)
T ss_pred             ecccccCCCccc-----hhHHhhccc-cc-cCCC---------------------------------------chhhcCH
Confidence            999999975331     112222110 00 0111                                       1245667


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .++|||.++|+..=++|.|++..|.|||+++
T Consensus       794 ~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~  824 (888)
T KOG4236|consen  794 EAIDLINNLLQVKMRKRYSVDKSLSHPWLQD  824 (888)
T ss_pred             HHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence            8899999999999999999999999999874

>KOG2345|consensus

Probab=99.88  E-value=4.2e-23  Score=149.37  Aligned_cols=132  Identities=18%  Similarity=0.275  Sum_probs=95.0

Q ss_pred             cccccccccccccCCCcceEEeecCCceeccCC------------CCCCCcCCcccchHHHhcC---CCCcchhhHHHHH
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------FTEDVQTRQYRSLEVLINA---GYDCSADIWSVAC   98 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~   98 (214)
                      ..|+|+||.||+....+.++++|||+++...-.            -...-.|..|+|||++.-.   ..+.++||||+||
T Consensus       150 yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGC  229 (302)
T KOG2345|consen  150 YAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGC  229 (302)
T ss_pred             ccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhH
Confidence            479999999999999999999999998766311            1123578899999999855   4678999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751         99 MAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++|.++.|..||...               .+.-|..            ....+++.      .           .++..
T Consensus       230 tLYa~mf~~sPfe~~---------------~~~GgSl------------aLAv~n~q------~-----------s~P~~  265 (302)
T KOG2345|consen  230 TLYAMMFGESPFERI---------------YQQGGSL------------ALAVQNAQ------I-----------SIPNS  265 (302)
T ss_pred             HHHHHHHcCCcchHH---------------hhcCCeE------------EEeeeccc------c-----------ccCCC
Confidence            999999999999521               1100100            00000000      0           00112


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ...+..+.+|+..||+.||.+||++.+++.+
T Consensus       266 ~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  266 SRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            3356678899999999999999999999853

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.3e-22  Score=154.16  Aligned_cols=134  Identities=11%  Similarity=0.156  Sum_probs=99.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC-CC---CcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-ED---VQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-~~---~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|....+|+|++|+||+++.++.+||+|||.++....... ..   .++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       116 lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~  195 (256)
T cd05059         116 LESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVF  195 (256)
T ss_pred             HHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHh
Confidence            5666679999999999999999999999999876543211 11   2334699999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      ..+....+.....                                         ...+...+.
T Consensus       196 ~~g~~p~~~~~------~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~  228 (256)
T cd05059         196 SEGKMPYERFS------NSEVVESVSAGYR-----------------------------------------LYRPKLAPT  228 (256)
T ss_pred             ccCCCCCCCCC------HHHHHHHHHcCCc-----------------------------------------CCCCCCCCH
Confidence            8 788886432      2222222111000                                         001223455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+++.+||+.+|++|||+.++++.
T Consensus       229 ~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         229 EVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            77899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.88  E-value=7.3e-23  Score=156.74  Aligned_cols=135  Identities=13%  Similarity=0.179  Sum_probs=99.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|+||+||+++.++.++|+|||+++......     ....+++.|++||...+..++.++|+||+||++++
T Consensus       127 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~e  206 (272)
T cd05075         127 YLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWE  206 (272)
T ss_pred             HHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHH
Confidence            3666778999999999999999999999999998764321     12245667999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      ..+....+ .. +...                                       ..+...
T Consensus       207 l~~~g~~p~~~~~------~~~~~~~~-~~-~~~~---------------------------------------~~~~~~  239 (272)
T cd05075         207 IATRGQTPYPGVE------NSEIYDYL-RQ-GNRL---------------------------------------KQPPDC  239 (272)
T ss_pred             HHcCCCCCCCCCC------HHHHHHHH-Hc-CCCC---------------------------------------CCCCCC
Confidence            998 788886422      11111111 10 0000                                       011233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||++|||+.+++++
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            4567899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.88  E-value=1.1e-22  Score=162.82  Aligned_cols=135  Identities=15%  Similarity=0.180  Sum_probs=99.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC-----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+||.||+++.++.+||+|||+++.......     ...++..|+|||.+.+..++.++||||+||+++++
T Consensus       230 lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~el  309 (375)
T cd05104         230 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI  309 (375)
T ss_pred             HHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHH
Confidence            5666779999999999999999999999999986643221     12345679999999998999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ....+...... +.          ..                             ..+...+
T Consensus       310 lt~g~~p~~~~~------~~~~~~~~~~~-~~----------~~-----------------------------~~~~~~~  343 (375)
T cd05104         310 FSLGSSPYPGMP------VDSKFYKMIKE-GY----------RM-----------------------------LSPECAP  343 (375)
T ss_pred             HhcCCCCCCCCC------chHHHHHHHHh-Cc----------cC-----------------------------CCCCCCC
Confidence            97 788886432      11112111110 00          00                             0012234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+|+.+||+.||++|||+.|+++.
T Consensus       344 ~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         344 SEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            567899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.88  E-value=7.9e-23  Score=157.08  Aligned_cols=135  Identities=19%  Similarity=0.315  Sum_probs=99.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|....+|+|++|+|++++.++.++|+|||+++......     ....++..|+|||.+.+..++.++|+||+||++++
T Consensus       134 ~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  213 (277)
T cd05062         134 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE  213 (277)
T ss_pred             HHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHH
Confidence            3566677999999999999999999999999987553221     12345678999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ....+..+..  +..+                                       ..+...
T Consensus       214 l~~~~~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~  246 (277)
T cd05062         214 IATLAEQPYQGMS------NEQVLRFVME--GGLL---------------------------------------DKPDNC  246 (277)
T ss_pred             HHcCCCCCCCCCC------HHHHHHHHHc--CCcC---------------------------------------CCCCCC
Confidence            998 678886432      2222211111  0000                                       011223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||++|||+.|++++
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         247 PDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4567899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.88  E-value=5.8e-23  Score=155.94  Aligned_cols=135  Identities=18%  Similarity=0.315  Sum_probs=102.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.+.++|+|+++.||++..++.++++|||.+......   .....|++.|+|||++.+..++.++|+||+|+++++++
T Consensus       115 ~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~  194 (255)
T cd08219         115 HIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELC  194 (255)
T ss_pred             HHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehh
Confidence            366777799999999999999999999999999876432   23457888999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      .......+..  +..+                                       ..+...+..
T Consensus       195 ~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  227 (255)
T cd08219         195 TLKHPFQANS------WKNLILKVCQ--GSYK---------------------------------------PLPSHYSYE  227 (255)
T ss_pred             hccCCCCCCC------HHHHHHHHhc--CCCC---------------------------------------CCCcccCHH
Confidence            9999997432      1121111111  1100                                       011223446


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +.+|+.+||+.||++|||+.+++.-
T Consensus       228 ~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         228 LRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHhCCcccCCCHHHHhhc
Confidence            7899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.88  E-value=1.2e-22  Score=157.27  Aligned_cols=134  Identities=13%  Similarity=0.209  Sum_probs=100.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++|.||+++.++.++|+|||++......     .....++..|+|||.+.+..++.++||||+||++++
T Consensus       138 ~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  217 (291)
T cd05094         138 YLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE  217 (291)
T ss_pred             HHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHH
Confidence            356667799999999999999999999999999765432     223456778999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ....+..+..  +..+                                       ..+...
T Consensus       218 l~t~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~  250 (291)
T cd05094         218 IFTYGKQPWFQLS------NTEVIECITQ--GRVL---------------------------------------ERPRVC  250 (291)
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHhC--CCCC---------------------------------------CCCccC
Confidence            998 999986433      1221111100  0000                                       001223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|++|||+.++++
T Consensus       251 ~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         251 PKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            456789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.88  E-value=2e-22  Score=152.85  Aligned_cols=138  Identities=26%  Similarity=0.408  Sum_probs=106.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|....+|+|+++.||++..++.+|++|||++...... .....++..|++||.+.+..++.++|+||+|++++++++|
T Consensus       118 ~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g  197 (256)
T cd08530         118 ALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATF  197 (256)
T ss_pred             HHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhC
Confidence            356667799999999999999999999999999776543 2234678899999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+       ...+...... +..+                                       ..+...+.++.
T Consensus       198 ~~p~~~~~-------~~~~~~~~~~-~~~~---------------------------------------~~~~~~~~~~~  230 (256)
T cd08530         198 APPFEARS-------MQDLRYKVQR-GKYP---------------------------------------PIPPIYSQDLQ  230 (256)
T ss_pred             CCCCCCCC-------HHHHHHHHhc-CCCC---------------------------------------CCchhhCHHHH
Confidence            99996433       1111111110 0000                                       01123445678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +++.+||+.+|++|||+.++++||++
T Consensus       231 ~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         231 NFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            99999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.88  E-value=1.7e-22  Score=153.52  Aligned_cols=133  Identities=17%  Similarity=0.197  Sum_probs=98.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|++++|++++.++.++|+|||.++......    ....++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       116 lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~  195 (256)
T cd05114         116 LERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF  195 (256)
T ss_pred             HHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHH
Confidence            666777999999999999999999999999987653221    1123455799999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      ..+.+..+.+  +..+                                       ..+...+.
T Consensus       196 ~~g~~p~~~~~------~~~~~~~i~~--~~~~---------------------------------------~~~~~~~~  228 (256)
T cd05114         196 TEGKMPFEKKS------NYEVVEMISR--GFRL---------------------------------------YRPKLASM  228 (256)
T ss_pred             cCCCCCCCCCC------HHHHHHHHHC--CCCC---------------------------------------CCCCCCCH
Confidence            9 888986433      2222222211  0000                                       00112234


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||+.+|++|||++++++
T Consensus       229 ~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         229 TVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            6689999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG1027|consensus

Probab=99.88  E-value=7.8e-24  Score=174.75  Aligned_cols=137  Identities=20%  Similarity=0.280  Sum_probs=101.2

Q ss_pred             ccccccccccccccccccCC-----CcceEEeecCCceeccC------CCCCCCcCCcccchHHHhcCCCCcchhhHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-----PFLFDIGTYRNACWVDK------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVA   97 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-----~~~~kl~Dfg~a~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G   97 (214)
                      +|.-.++|||+||+|||+..     ...++|+|||+++....      ......||-+|+|||.+....-+.++||+|+|
T Consensus       622 LHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslG  701 (903)
T KOG1027|consen  622 LHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLG  701 (903)
T ss_pred             HHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcC
Confidence            44455599999999999866     25789999999998852      23445789999999999998878899999999


Q ss_pred             HHHHHHhhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcC
Q psy16751         98 CMAFELATG-DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN  176 (214)
Q Consensus        98 ~~l~~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (214)
                      |++++.++| ..||..        ..+.-++|+.-  ..                   ++.                  .
T Consensus       702 CvfyYvltgG~HpFGd--------~~~R~~NIl~~--~~-------------------~L~------------------~  734 (903)
T KOG1027|consen  702 CVFYYVLTGGSHPFGD--------SLERQANILTG--NY-------------------TLV------------------H  734 (903)
T ss_pred             ceEEEEecCCccCCCc--------hHHhhhhhhcC--cc-------------------cee------------------e
Confidence            999999986 678853        12222222210  00                   000                  0


Q ss_pred             CChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       177 ~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +.+....++.|||.+|+.++|..||||.++|.||+|
T Consensus       735 L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlF  770 (903)
T KOG1027|consen  735 LEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLF  770 (903)
T ss_pred             eccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence            011111167899999999999999999999999998

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.88  E-value=1.1e-22  Score=156.24  Aligned_cols=135  Identities=11%  Similarity=0.155  Sum_probs=98.1

Q ss_pred             cccccccccccccccccccCCCc---ceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      .+|...++|+|++++||++..++   .+||+|||+++......     .....+..|+|||++.+..++.++||||+||+
T Consensus       131 ~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i  210 (277)
T cd05036         131 YLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL  210 (277)
T ss_pred             HHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence            35666779999999999997654   69999999998663221     12233567999999998889999999999999


Q ss_pred             HHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        100 AFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       100 l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++++++ |..||...+      . +.+.......+..                                        ..+
T Consensus       211 l~el~~~g~~pf~~~~------~-~~~~~~~~~~~~~----------------------------------------~~~  243 (277)
T cd05036         211 LWEIFSLGYMPYPGRT------N-QEVMEFVTGGGRL----------------------------------------DPP  243 (277)
T ss_pred             HHHHHcCCCCCCCCCC------H-HHHHHHHHcCCcC----------------------------------------CCC
Confidence            999996 888886433      1 1121111100000                                        011


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ...+..+.+++.+||+.+|++|||+.++++|
T Consensus       244 ~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         244 KGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            2334567899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.5e-22  Score=152.63  Aligned_cols=133  Identities=11%  Similarity=0.126  Sum_probs=98.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCC------CCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTE------DVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|...++|+|++++|++++.++.+||+|||.++........      ..++..|+|||.+.+..++.++|+||+||++++
T Consensus       111 lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  190 (257)
T cd05060         111 LESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE  190 (257)
T ss_pred             HhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHH
Confidence            56666799999999999999999999999999866432111      122356999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      . ..+.........                                        ...+...
T Consensus       191 ~~~~g~~p~~~~~------~-~~~~~~~~~~~~----------------------------------------~~~~~~~  223 (257)
T cd05060         191 AFSYGAKPYGEMK------G-AEVIAMLESGER----------------------------------------LPRPEEC  223 (257)
T ss_pred             HHcCCCCCcccCC------H-HHHHHHHHcCCc----------------------------------------CCCCCCC
Confidence            997 899986432      1 222221111000                                        0012234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|++|||+.++++
T Consensus       224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         224 PQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            456789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0193|consensus

Probab=99.88  E-value=3.9e-23  Score=165.61  Aligned_cols=138  Identities=14%  Similarity=0.249  Sum_probs=104.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc-----CCCCCCCcCCcccchHHHhcC---CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD-----KHFTEDVQTRQYRSLEVLINA---GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~-----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|+|+.||.+.+++.|||+|||++....     ......-|...|||||++...   +|+..+||||||++
T Consensus       503 YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV  582 (678)
T KOG0193|consen  503 YLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIV  582 (678)
T ss_pred             hhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHH
Confidence            3788888999999999999999999999999998663     234455778889999999854   69999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +|||++|..||...+       .+|+--++                      .++.+.  +            +......
T Consensus       583 ~YELltg~lPysi~~-------~dqIifmV----------------------GrG~l~--p------------d~s~~~s  619 (678)
T KOG0193|consen  583 WYELLTGELPYSIQN-------RDQIIFMV----------------------GRGYLM--P------------DLSKIRS  619 (678)
T ss_pred             HHHHHhCcCCcCCCC-------hhheEEEe----------------------cccccC--c------------cchhhhc
Confidence            999999999997322       22221110                      000000  0            0001235


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.++++|+..||.+++++||++.++|.
T Consensus       620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  620 NCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             cCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            67778999999999999999999999875

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.88  E-value=2.6e-22  Score=152.58  Aligned_cols=134  Identities=11%  Similarity=0.145  Sum_probs=99.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-C---CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-T---EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-~---~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|+++.|++++.++.+||+|||.++...... .   ...++..|+|||.+.+..++.++|+||+||++++++
T Consensus       116 lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~  195 (256)
T cd05113         116 LESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY  195 (256)
T ss_pred             HHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHh
Confidence            566677999999999999999999999999987654321 1   123456799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      .......+...  ..+                                       ..+...+.
T Consensus       196 ~~g~~p~~~~~------~~~~~~~~~~~--~~~---------------------------------------~~~~~~~~  228 (256)
T cd05113         196 SLGKMPYERFN------NSETVEKVSQG--LRL---------------------------------------YRPHLASE  228 (256)
T ss_pred             cCCCCCcCcCC------HHHHHHHHhcC--CCC---------------------------------------CCCCCCCH
Confidence            8 888886432      12222222110  000                                       01122345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+++.+||+.||.+|||+.+++.+
T Consensus       229 ~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         229 KVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            67899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0608|consensus

Probab=99.88  E-value=7.6e-23  Score=165.14  Aligned_cols=159  Identities=16%  Similarity=0.228  Sum_probs=110.2

Q ss_pred             cCchhhhhHHHHHHhhhccccccc-----ccccccccccccCCCcceEEeecCCceecc----CC---------------
Q psy16751         11 FGSLEETDKKRRLYIRNACWVDKH-----FTEDVQTRQYRSLPPFLFDIGTYRNACWVD----KH---------------   66 (214)
Q Consensus        11 ~~~~~~~d~k~~~~~~~~~~~~~~-----~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~----~~---------------   66 (214)
                      ..+|.+.++.+....+-.|.++++     +|||+||.|||++.+|.+||.|||+|.-+.    +.               
T Consensus       722 rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep  801 (1034)
T KOG0608|consen  722 RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEP  801 (1034)
T ss_pred             HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCC
Confidence            345666666443323333444333     899999999999999999999999987551    00               


Q ss_pred             --------------------------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCC
Q psy16751         67 --------------------------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTR  120 (214)
Q Consensus        67 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~  120 (214)
                                                ....+||+-|+|||++...+|+..||.||+||||+||+.|++||...+-     
T Consensus       802 ~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp-----  876 (1034)
T KOG0608|consen  802 SPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP-----  876 (1034)
T ss_pred             chhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC-----
Confidence                                      0123799999999999999999999999999999999999999975431     


Q ss_pred             cHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCC
Q psy16751        121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLR  200 (214)
Q Consensus       121 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R  200 (214)
                       .+.-.++            ..|.   .+.                       .+....+.+.++.++|.++ +-+++.|
T Consensus       877 -~~tq~kv------------~nw~---~~l-----------------------~~~~~~~ls~e~~~li~kL-c~sad~R  916 (1034)
T KOG0608|consen  877 -GETQYKV------------INWR---NFL-----------------------HIPYQGNLSKEALDLIQKL-CCSADSR  916 (1034)
T ss_pred             -Ccceeee------------eehh---hcc-----------------------ccccccccCHHHHHHHHHH-hcChhhh
Confidence             1100000            0000   000                       0112234556778999885 5678888


Q ss_pred             CC---HHHHhcCCCCCC
Q psy16751        201 AT---AADCLQHPWLQN  214 (214)
Q Consensus       201 ~t---~~e~l~hp~f~~  214 (214)
                      +.   ++|+..||||+.
T Consensus       917 LGkng~d~vKaHpfFkg  933 (1034)
T KOG0608|consen  917 LGKNGADQVKAHPFFKG  933 (1034)
T ss_pred             hcccchhhhhcCccccc
Confidence            75   788999999973

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.3e-22  Score=154.41  Aligned_cols=134  Identities=16%  Similarity=0.267  Sum_probs=100.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|...++|+|++|+|++++.++.+||+|||+++.....     .....++..|+|||.+.+..++.++||||+||++++
T Consensus       134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  213 (277)
T cd05032         134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWE  213 (277)
T ss_pred             HHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHH
Confidence            356677799999999999999999999999998765321     223456778999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+       ...+.+.... +..+                                       ..+...
T Consensus       214 l~t~g~~p~~~~~-------~~~~~~~~~~-~~~~---------------------------------------~~~~~~  246 (277)
T cd05032         214 MATLAEQPYQGLS-------NEEVLKFVID-GGHL---------------------------------------DLPENC  246 (277)
T ss_pred             hhccCCCCCccCC-------HHHHHHHHhc-CCCC---------------------------------------CCCCCC
Confidence            998 888886432       1222211111 0000                                       012233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|++|||+.+++.
T Consensus       247 ~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         247 PDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            557789999999999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.88  E-value=1.9e-22  Score=153.88  Aligned_cols=133  Identities=14%  Similarity=0.197  Sum_probs=98.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|....+|+|++|+|+++..++.+||+|||.+........    ...++..|+|||.+.+..++.++||||+||++++++
T Consensus       120 lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  199 (263)
T cd05052         120 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA  199 (263)
T ss_pred             HHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence            5556679999999999999999999999999987643221    112345799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+       .+.......  ....                                      ...+...+.
T Consensus       200 t~g~~p~~~~~-------~~~~~~~~~--~~~~--------------------------------------~~~~~~~~~  232 (263)
T cd05052         200 TYGMSPYPGID-------LSQVYELLE--KGYR--------------------------------------MERPEGCPP  232 (263)
T ss_pred             cCCCCCCCCCC-------HHHHHHHHH--CCCC--------------------------------------CCCCCCCCH
Confidence            8 888886433       121111111  0000                                      001223455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++.+++.+||+.||++|||+.++++
T Consensus       233 ~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         233 KVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHH
Confidence            7789999999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.88  E-value=2.8e-22  Score=153.25  Aligned_cols=133  Identities=8%  Similarity=0.093  Sum_probs=97.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CC--CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FT--EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~--~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|....+|+|++|+|++++.++.++++|||.+......  ..  ...++..|+|||.+.+..++.++||||+||++++++
T Consensus       123 lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell  202 (266)
T cd05064         123 LSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVM  202 (266)
T ss_pred             HHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHh
Confidence            56666799999999999999999999999987654321  11  223456799999999989999999999999999977


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      ..+.+..+.+.  ..                                       ...+..++.
T Consensus       203 ~~g~~p~~~~~------~~~~~~~~~~~--~~---------------------------------------~~~~~~~~~  235 (266)
T cd05064         203 SYGERPYWDMS------GQDVIKAVEDG--FR---------------------------------------LPAPRNCPN  235 (266)
T ss_pred             cCCCCCcCcCC------HHHHHHHHHCC--CC---------------------------------------CCCCCCCCH
Confidence            5 999986432      12222221110  00                                       001233455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||+.+|++|||++++++
T Consensus       236 ~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         236 LLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHHH
Confidence            6789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.88  E-value=1.9e-22  Score=155.30  Aligned_cols=133  Identities=14%  Similarity=0.182  Sum_probs=99.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++|+||++..++.++|+|||+++.....     .....+++.|+|||.+.+..++.++|+||+||+++++
T Consensus       138 LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  217 (280)
T cd05092         138 LASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEI  217 (280)
T ss_pred             HHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHH
Confidence            56667799999999999999999999999999765322     1223456789999999998899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |.+||....      ..+.+..+..  +..+                                       ..+..++
T Consensus       218 ~~~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~  250 (280)
T cd05092         218 FTYGKQPWYQLS------NTEAIECITQ--GREL---------------------------------------ERPRTCP  250 (280)
T ss_pred             HcCCCCCCccCC------HHHHHHHHHc--CccC---------------------------------------CCCCCCC
Confidence            98 888886422      1222221111  0000                                       0112344


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+||+.||.+|||++++++
T Consensus       251 ~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         251 PEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHH
Confidence            56789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.6e-22  Score=154.73  Aligned_cols=134  Identities=13%  Similarity=0.162  Sum_probs=99.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC-----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++|+||++..++.+||+|||.++.......     ...++..|+|||.+.+..++.++|+||+||+++++
T Consensus       129 lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el  208 (273)
T cd05035         129 LSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI  208 (273)
T ss_pred             HHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHH
Confidence            5666779999999999999999999999999987643211     12345679999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..      ..+.+..+..  +..                                       ...+..++
T Consensus       209 ~~~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~~  241 (273)
T cd05035         209 ATRGQTPYPGVE------NHEIYDYLRH--GNR---------------------------------------LKQPEDCL  241 (273)
T ss_pred             HhCCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCCcCCC
Confidence            98 888886432      1121111110  000                                       00123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||+.||++|||+.|++++
T Consensus       242 ~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         242 DELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            577899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.88  E-value=3e-22  Score=154.34  Aligned_cols=134  Identities=10%  Similarity=0.131  Sum_probs=100.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|.|++++.++.+||+|||+++.....     .....++..|+|||.+.+..++.++|+||+||+++++
T Consensus       140 lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el  219 (283)
T cd05090         140 LSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEI  219 (283)
T ss_pred             HHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHH
Confidence            56666799999999999999999999999999765321     1223456679999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      .......+ .....+                                        ..+..++
T Consensus       220 ~~~g~~p~~~~~------~~~~~~~~-~~~~~~----------------------------------------~~~~~~~  252 (283)
T cd05090         220 FSFGLQPYYGFS------NQEVIEMV-RKRQLL----------------------------------------PCSEDCP  252 (283)
T ss_pred             HcCCCCCCCCCC------HHHHHHHH-HcCCcC----------------------------------------CCCCCCC
Confidence            98 888886432      12222211 110000                                        0123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||+.||.+||++.+++++
T Consensus       253 ~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         253 PRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            577899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.87  E-value=2.1e-22  Score=153.31  Aligned_cols=133  Identities=10%  Similarity=0.149  Sum_probs=98.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|....+|+|++|+|++++.++.++|+|||.+.......    ....++..|+|||.+.+..++.++|+||+||++++++
T Consensus       119 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~  198 (261)
T cd05072         119 IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIV  198 (261)
T ss_pred             HHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHH
Confidence            566667999999999999999999999999998764321    1223456799999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      .......+...   ..                                      .......+.
T Consensus       199 t~g~~p~~~~~------~~~~~~~~~~~---~~--------------------------------------~~~~~~~~~  231 (261)
T cd05072         199 TYGKIPYPGMS------NSDVMSALQRG---YR--------------------------------------MPRMENCPD  231 (261)
T ss_pred             ccCCCCCCCCC------HHHHHHHHHcC---CC--------------------------------------CCCCCCCCH
Confidence            8 888886433      22222221110   00                                      000122345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++.+++.+||..+|++|||++++.+
T Consensus       232 ~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         232 ELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            6789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.87  E-value=4.7e-22  Score=151.31  Aligned_cols=133  Identities=11%  Similarity=0.146  Sum_probs=98.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC------CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT------EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|.+..+|+|++|.||++..++.+||+|||.+........      ...++..|+|||.+.+..++.++|+||+||++++
T Consensus       111 lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  190 (257)
T cd05115         111 LEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWE  190 (257)
T ss_pred             HHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHH
Confidence            5667779999999999999999999999999975532211      1123467999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||....      .......+.+  +..                                       ...+..+
T Consensus       191 l~~~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~  223 (257)
T cd05115         191 AFSYGQKPYKKMK------GPEVMSFIEQ--GKR---------------------------------------LDCPAEC  223 (257)
T ss_pred             HhcCCCCCcCcCC------HHHHHHHHHC--CCC---------------------------------------CCCCCCC
Confidence            996 999986433      1121111110  000                                       0012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +.++.+++.+||..+|++||++.++.+
T Consensus       224 ~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         224 PPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            567889999999999999999998875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=1.2e-22  Score=158.24  Aligned_cols=135  Identities=12%  Similarity=0.151  Sum_probs=98.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCC--CCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTE--DVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|...++|+|++|.|++++.++.+||+|||++.........  ..++..|+|||.+.+..++.++||||+||+++++++
T Consensus       139 ~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  218 (303)
T cd05088         139 YLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS  218 (303)
T ss_pred             HHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHh
Confidence            356777799999999999999999999999998644322122  233557999999988889999999999999999998


Q ss_pred             -CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        106 -GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       106 -g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                       |..||...+      ..+....+.   ....                                      ...+...+..
T Consensus       219 ~g~~p~~~~~------~~~~~~~~~---~~~~--------------------------------------~~~~~~~~~~  251 (303)
T cd05088         219 LGGTPYCGMT------CAELYEKLP---QGYR--------------------------------------LEKPLNCDDE  251 (303)
T ss_pred             cCCCCcccCC------hHHHHHHHh---cCCc--------------------------------------CCCCCCCCHH
Confidence             999986432      111111110   0000                                      0001223446


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +.+|+.+||+.+|++|||+++++++
T Consensus       252 ~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         252 VYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.87  E-value=1.6e-22  Score=156.62  Aligned_cols=135  Identities=16%  Similarity=0.210  Sum_probs=99.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++|.||++..++.+||+|||.++.....     .....++..|+|||.+.+..++.++||||+||++++
T Consensus       147 ~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  226 (293)
T cd05053         147 FLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWE  226 (293)
T ss_pred             HHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHH
Confidence            356677799999999999999999999999999866432     122234567999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+       ...+...... +..                                       ...+...
T Consensus       227 l~~~g~~p~~~~~-------~~~~~~~~~~-~~~---------------------------------------~~~~~~~  259 (293)
T cd05053         227 IFTLGGSPYPGIP-------VEELFKLLKE-GYR---------------------------------------MEKPQNC  259 (293)
T ss_pred             HhcCCCCCCCCCC-------HHHHHHHHHc-CCc---------------------------------------CCCCCCC
Confidence            997 888886432       1222111110 000                                       0011233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||..||++|||+.+++++
T Consensus       260 ~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         260 TQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            4567899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.87  E-value=3.2e-22  Score=155.01  Aligned_cols=140  Identities=12%  Similarity=0.151  Sum_probs=99.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+|+++..++.++|+|||.++.....     .....++..|+|||.+.+..++.++||||+||+++++
T Consensus       146 LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  225 (296)
T cd05051         146 LESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI  225 (296)
T ss_pred             HHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHH
Confidence            56677799999999999999999999999999865322     2233566789999999988899999999999999999


Q ss_pred             hh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        104 AT--GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       104 ~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++  +..||...+      ..+.+......+......                  ..                ...+...
T Consensus       226 ~~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~------------------~~----------------~~~~~~~  265 (296)
T cd05051         226 LTLCREQPYEHLT------DQQVIENAGHFFRDDGRQ------------------IY----------------LPRPPNC  265 (296)
T ss_pred             HhcCCCCCCCCcC------hHHHHHHHHhcccccccc------------------cc----------------CCCccCC
Confidence            87  566775322      223222222211000000                  00                0011233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +.++.+++.+||+.||++|||+.++++
T Consensus       266 ~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         266 PKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             CHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            457889999999999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.87  E-value=4e-22  Score=152.22  Aligned_cols=136  Identities=18%  Similarity=0.228  Sum_probs=100.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++||+++.++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||+|++++++++
T Consensus       122 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~  201 (267)
T cd08229         122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA  201 (267)
T ss_pred             HHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHh
Confidence            566667999999999999999999999999987664322   23478889999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.+...     +...+.........++                                       ......+..+
T Consensus       202 g~~p~~~~~~-----~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~  237 (267)
T cd08229         202 LQSPFYGDKM-----NLYSLCKKIEQCDYPP---------------------------------------LPSDHYSEEL  237 (267)
T ss_pred             CCCCcccccc-----hHHHHhhhhhcCCCCC---------------------------------------CCcccccHHH
Confidence            9999864321     1111111111000000                                       0012345577


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+++.+||+.||.+|||+.++++
T Consensus       238 ~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         238 RQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHHHhcCCCcccCCCHHHHHH
Confidence            89999999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG1095|consensus

Probab=99.87  E-value=2.7e-22  Score=171.57  Aligned_cols=129  Identities=13%  Similarity=0.221  Sum_probs=99.9

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC-CCCCC----cCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-C
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDV----QTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-G  106 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~----~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g  106 (214)
                      ..+|||+..+|+|++....|||+|||+|+..... ++..-    -..-|||||.+....++.++|||||||++||+++ |
T Consensus       822 ~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG  901 (1025)
T KOG1095|consen  822 HFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG  901 (1025)
T ss_pred             CCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence            3469999999999999999999999999955433 22221    2245999999999899999999999999999998 7


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+      +.+.+....+ -|..                                        ..|..|+..+.
T Consensus       902 ~~PY~~~~------n~~v~~~~~~-ggRL----------------------------------------~~P~~CP~~ly  934 (1025)
T KOG1095|consen  902 ATPYPSRS------NFEVLLDVLE-GGRL----------------------------------------DPPSYCPEKLY  934 (1025)
T ss_pred             CCCCCCcc------hHHHHHHHHh-CCcc----------------------------------------CCCCCCChHHH
Confidence            78887544      3443332222 1221                                        13466777888


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++|..||+.+|++||++..++.
T Consensus       935 ~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  935 QLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHHccCChhhCccHHHHHh
Confidence            9999999999999999998874

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.87  E-value=4.3e-22  Score=151.88  Aligned_cols=133  Identities=12%  Similarity=0.166  Sum_probs=98.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++|.||++..++.++|+|||.++.......    ...++..|+|||...+..++.++|+||+||++++++
T Consensus       118 lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ell  197 (262)
T cd05071         118 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT  197 (262)
T ss_pred             HHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence            5666779999999999999999999999999986643221    224556799999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||....      ..+....+... ...                                        ..+...+.
T Consensus       198 t~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~~~  230 (262)
T cd05071         198 TKGRVPYPGMV------NREVLDQVERG-YRM----------------------------------------PCPPECPE  230 (262)
T ss_pred             cCCCCCCCCCC------hHHHHHHHhcC-CCC----------------------------------------CCccccCH
Confidence            9 778886432      12222221110 000                                        01123345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||+.||++|||++++++
T Consensus       231 ~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         231 SLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHH
Confidence            6789999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=5.9e-22  Score=150.48  Aligned_cols=134  Identities=14%  Similarity=0.143  Sum_probs=100.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|....+|+|++|+|++++.++.+||+|||.+......      .....++..|+|||.+.+..++.++|+||+||++++
T Consensus       113 lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~e  192 (257)
T cd05040         113 LESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWE  192 (257)
T ss_pred             HHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHH
Confidence            56677799999999999999999999999999876432      112356678999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ..+....+... +..                                       ...+...
T Consensus       193 l~t~g~~p~~~~~------~~~~~~~~~~~-~~~---------------------------------------~~~~~~~  226 (257)
T cd05040         193 MFTYGEEPWAGLS------GSQILKKIDKE-GER---------------------------------------LERPEAC  226 (257)
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHhc-CCc---------------------------------------CCCCccC
Confidence            998 999986432      22222222110 000                                       0011223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|++|||+.++++
T Consensus       227 ~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         227 PQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             CHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            456789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.87  E-value=5.8e-22  Score=150.95  Aligned_cols=133  Identities=15%  Similarity=0.166  Sum_probs=95.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      +|...++|+|++++||+++.++.+||+|||+++.....       .....++..|+|||.+.+..++.++||||+||+++
T Consensus       114 lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  193 (262)
T cd05058         114 LASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW  193 (262)
T ss_pred             HHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHH
Confidence            56666799999999999999999999999999765321       11224566799999998888999999999999999


Q ss_pred             HHhhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        102 ELATG-DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       102 ~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++++| .++|...+       ...+...... +..+                                       ..+..
T Consensus       194 el~~~~~~~~~~~~-------~~~~~~~~~~-~~~~---------------------------------------~~~~~  226 (262)
T cd05058         194 ELMTRGAPPYPDVD-------SFDITVYLLQ-GRRL---------------------------------------LQPEY  226 (262)
T ss_pred             HHHcCCCCCCCCCC-------HHHHHHHHhc-CCCC---------------------------------------CCCCc
Confidence            99995 55564322       1111111100 0000                                       00112


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+..+.+++.+||..+|++|||+.++++
T Consensus       227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         227 CPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            2346789999999999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.87  E-value=3.6e-22  Score=151.54  Aligned_cols=134  Identities=11%  Similarity=0.112  Sum_probs=99.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-C
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-G  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g  106 (214)
                      .+|....+|+|++|+|+++..++.++|+|||.+............+..|+|||.+.+..++.++|+||+||+++++++ |
T Consensus       115 ~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g  194 (254)
T cd05083         115 YLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG  194 (254)
T ss_pred             HHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCC
Confidence            356667799999999999999999999999999765443333345567999999988889999999999999999997 8


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+      ..+....+.+  +..                                       ...+...+..+.
T Consensus       195 ~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~~~~~~  227 (254)
T cd05083         195 RAPYPKMS------LKEVKECVEK--GYR---------------------------------------MEPPEGCPADVY  227 (254)
T ss_pred             CCCCccCC------HHHHHHHHhC--CCC---------------------------------------CCCCCcCCHHHH
Confidence            88886432      1111111100  000                                       001123345678


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +++.+||+.+|.+|||+++++.
T Consensus       228 ~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         228 VLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0587|consensus

Probab=99.87  E-value=8.5e-23  Score=169.44  Aligned_cols=140  Identities=17%  Similarity=0.285  Sum_probs=108.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~l  100 (214)
                      +|-+.++|||+|..|||+..++.||+.|||.+...+..   ..+.+|||.|||||++...     .|+..+|+||+|++.
T Consensus       139 LH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa  218 (953)
T KOG0587|consen  139 LHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA  218 (953)
T ss_pred             HhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhcccee
Confidence            44445589999999999999999999999999988654   4456999999999999865     377899999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      .||.-|.+|+..         +.-...+..+-..||+...                                    .+..
T Consensus       219 IEladG~PPl~D---------mHPmraLF~IpRNPPPkLk------------------------------------rp~k  253 (953)
T KOG0587|consen  219 IEMAEGAPPLCD---------MHPMRALFLIPRNPPPKLK------------------------------------RPKK  253 (953)
T ss_pred             ehhcCCCCCccC---------cchhhhhccCCCCCCcccc------------------------------------chhh
Confidence            999999999862         2222222222122222111                                    1234


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ...++.+||..||..|-.+||+..++|+|||.+
T Consensus       254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  254 WSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             HHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence            456788999999999999999999999999975

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.87  E-value=6.3e-22  Score=150.25  Aligned_cols=134  Identities=14%  Similarity=0.178  Sum_probs=98.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|....+|+|++++|+++..++.++|+|||.+.......    ....++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       116 lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~  195 (256)
T cd05112         116 LESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVF  195 (256)
T ss_pred             HHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHH
Confidence            566677999999999999999999999999987654321    1223456799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||....      ....+..+... ..+                                        ..+...+.
T Consensus       196 ~~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~~~  228 (256)
T cd05112         196 SEGKTPYENRS------NSEVVETINAG-FRL----------------------------------------YKPRLASQ  228 (256)
T ss_pred             cCCCCCCCcCC------HHHHHHHHhCC-CCC----------------------------------------CCCCCCCH
Confidence            8 888886432      11212111100 000                                        00122345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+|+.+||+.+|++|||+.+++++
T Consensus       229 ~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         229 SVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHHHHHHHHcccChhhCCCHHHHHHh
Confidence            67899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=7.3e-22  Score=149.97  Aligned_cols=133  Identities=12%  Similarity=0.160  Sum_probs=99.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~  107 (214)
                      +|.+.++|+|+++.||+++.++.++|+|||.++...........+..|+|||.+.+..++.++|+||+|++++++++ |.
T Consensus       118 lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~  197 (256)
T cd05039         118 LEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  197 (256)
T ss_pred             HHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCC
Confidence            56667799999999999999999999999999877544333345567999999988889999999999999999997 88


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||...+       ...+...... +. .                                      ...+...+..+.+
T Consensus       198 ~p~~~~~-------~~~~~~~~~~-~~-~--------------------------------------~~~~~~~~~~~~~  230 (256)
T cd05039         198 VPYPRIP-------LKDVVPHVEK-GY-R--------------------------------------MEAPEGCPPEVYK  230 (256)
T ss_pred             CCCCCCC-------HHHHHHHHhc-CC-C--------------------------------------CCCccCCCHHHHH
Confidence            8886432       1211111110 00 0                                      0011233456789


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q psy16751        188 FLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++.+||+.+|++|||++++++
T Consensus       231 li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         231 VMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHHHHhccChhhCcCHHHHHH
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.87  E-value=1.1e-21  Score=152.66  Aligned_cols=133  Identities=14%  Similarity=0.188  Sum_probs=98.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++|.|+++..++.+||+|||+++.....     .....++..|+|||.+.+..++.++||||+||+++++
T Consensus       125 LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el  204 (303)
T cd05110         125 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL  204 (303)
T ss_pred             HhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHH
Confidence            56677799999999999999999999999999866422     1122456689999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..       ...+.........++                                        .+..++
T Consensus       205 ~t~g~~p~~~~~-------~~~~~~~~~~~~~~~----------------------------------------~~~~~~  237 (303)
T cd05110         205 MTFGGKPYDGIP-------TREIPDLLEKGERLP----------------------------------------QPPICT  237 (303)
T ss_pred             HhCCCCCCCCCC-------HHHHHHHHHCCCCCC----------------------------------------CCCCCC
Confidence            87 888886422       222222221100000                                        012233


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+|+..+|++|||++++++
T Consensus       238 ~~~~~li~~c~~~~p~~Rp~~~~l~~  263 (303)
T cd05110         238 IDVYMVMVKCWMIDADSRPKFKELAA  263 (303)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            46689999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.87  E-value=4.4e-22  Score=150.71  Aligned_cols=134  Identities=14%  Similarity=0.158  Sum_probs=98.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCC-----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++|+||+++.++.++|+|||.+........     ...++..|+|||.+.+..++.++|+||+||++++
T Consensus       108 ~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~  187 (251)
T cd05041         108 YLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE  187 (251)
T ss_pred             HHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHH
Confidence            35666779999999999999999999999999976542211     1123456999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||....      . ............+                                        ..+...
T Consensus       188 l~t~~~~p~~~~~------~-~~~~~~~~~~~~~----------------------------------------~~~~~~  220 (251)
T cd05041         188 TFSLGDTPYPGMS------N-QQTRERIESGYRM----------------------------------------PAPQLC  220 (251)
T ss_pred             HHhccCCCCccCC------H-HHHHHHHhcCCCC----------------------------------------CCCccC
Confidence            998 778886433      1 1111111100000                                        011233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|.+|||+.|+++
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            457789999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.87  E-value=3.9e-22  Score=155.24  Aligned_cols=135  Identities=16%  Similarity=0.192  Sum_probs=99.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++++||++..++.+||+|||.++.....     .....+++.|+|||++.+..++.++||||+|+++++
T Consensus       152 ~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  231 (304)
T cd05101         152 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  231 (304)
T ss_pred             HHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHH
Confidence            356677799999999999999999999999999876432     122345667999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..+|.+.+       ...+......  ...                                      ...+..+
T Consensus       232 l~~~g~~p~~~~~-------~~~~~~~~~~--~~~--------------------------------------~~~~~~~  264 (304)
T cd05101         232 IFTLGGSPYPGIP-------VEELFKLLKE--GHR--------------------------------------MDKPANC  264 (304)
T ss_pred             HHcCCCCCcccCC-------HHHHHHHHHc--CCc--------------------------------------CCCCCCC
Confidence            998 777775322       2222111110  000                                      0011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||..+|.+|||+.++++.
T Consensus       265 ~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         265 TNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            5577899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.87  E-value=6.5e-22  Score=153.98  Aligned_cols=134  Identities=14%  Similarity=0.175  Sum_probs=99.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+||++..++.++++|||+++......     ....++..|+|||.+.+..++.++||||+||+++++
T Consensus       157 lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el  236 (302)
T cd05055         157 LASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI  236 (302)
T ss_pred             HHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHH
Confidence            566677999999999999999999999999998654321     123456779999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      ....+...... +..+                                       ..+...+
T Consensus       237 ~t~g~~p~~~~~------~~~~~~~~~~~-~~~~---------------------------------------~~~~~~~  270 (302)
T cd05055         237 FSLGSNPYPGMP------VDSKFYKLIKE-GYRM---------------------------------------AQPEHAP  270 (302)
T ss_pred             HhCCCCCcCCCC------chHHHHHHHHc-CCcC---------------------------------------CCCCCCC
Confidence            98 889986433      11111111110 0000                                       0012234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+|+.+||..+|++|||+.|+++
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            56789999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.87  E-value=9.5e-22  Score=149.71  Aligned_cols=134  Identities=11%  Similarity=0.148  Sum_probs=99.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-CC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|...++|+|++|+|++++.++.++|+|||.+..... ..   ....++..|+|||.+.+..++.++|+||+|++++++
T Consensus       117 ~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el  196 (260)
T cd05067         117 FIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI  196 (260)
T ss_pred             HHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHH
Confidence            35666779999999999999999999999999976652 21   122455679999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      .......+......                                         ..+...+
T Consensus       197 ~~~g~~p~~~~~------~~~~~~~~~~~~~~-----------------------------------------~~~~~~~  229 (260)
T cd05067         197 VTYGRIPYPGMT------NPEVIQNLERGYRM-----------------------------------------PRPDNCP  229 (260)
T ss_pred             HhCCCCCCCCCC------hHHHHHHHHcCCCC-----------------------------------------CCCCCCC
Confidence            98 999996433      11212111110000                                         0112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+++.+||+.+|++|||+++++.
T Consensus       230 ~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         230 EELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHH
Confidence            56789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.87  E-value=5e-22  Score=151.26  Aligned_cols=132  Identities=13%  Similarity=0.146  Sum_probs=98.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|+++.|+++..++.++|+|||.+........    ...++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       118 lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~  197 (260)
T cd05070         118 IERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV  197 (260)
T ss_pred             HHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHH
Confidence            5667779999999999999999999999999987643211    123455799999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |.+||...+      ..+....+... ..+                                        ..+...+.
T Consensus       198 ~~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~~~  230 (260)
T cd05070         198 TKGRVPYPGMN------NREVLEQVERG-YRM----------------------------------------PCPQDCPI  230 (260)
T ss_pred             hcCCCCCCCCC------HHHHHHHHHcC-CCC----------------------------------------CCCCcCCH
Confidence            9 888886432      22222222110 000                                        01123345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHh
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      .+.+|+.+||+.+|++|||+.++.
T Consensus       231 ~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         231 SLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHH
Confidence            678999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.87  E-value=5.6e-22  Score=153.36  Aligned_cols=133  Identities=17%  Similarity=0.237  Sum_probs=98.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+||++..++.+||+|||+++.....     .....++..|+|||.+.+..++.++||||+|++++++
T Consensus       143 LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el  222 (290)
T cd05045         143 LAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI  222 (290)
T ss_pred             HHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHH
Confidence            56667799999999999999999999999999765321     1122456679999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..       .+.+......           ...                             ...+...+
T Consensus       223 ~t~g~~p~~~~~-------~~~~~~~~~~-----------~~~-----------------------------~~~~~~~~  255 (290)
T cd05045         223 VTLGGNPYPGIA-------PERLFNLLKT-----------GYR-----------------------------MERPENCS  255 (290)
T ss_pred             HhcCCCCCCCCC-------HHHHHHHHhC-----------CCC-----------------------------CCCCCCCC
Confidence            98 888886422       1222211110           000                             00112334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+|+.+||+.+|++|||++++++
T Consensus       256 ~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         256 EEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHH
Confidence            56789999999999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.87  E-value=6.2e-22  Score=154.87  Aligned_cols=134  Identities=16%  Similarity=0.198  Sum_probs=98.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|+++.|+++..++.+||+|||.++.....     .....++..|+|||.+.+..++.++|+||+||++++
T Consensus       149 ~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~e  228 (314)
T cd05099         149 YLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWE  228 (314)
T ss_pred             HHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHH
Confidence            356677799999999999999999999999999866432     111233457999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ..+....+..  +..                                       ...+..+
T Consensus       229 l~~~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~  261 (314)
T cd05099         229 IFTLGGSPYPGIP------VEELFKLLRE--GHR---------------------------------------MDKPSNC  261 (314)
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCCCCC
Confidence            998 778886432      1122211110  000                                       0012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +.++.+++.+||..+|++|||+.++++
T Consensus       262 ~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         262 THELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            456789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.87  E-value=7e-22  Score=152.65  Aligned_cols=133  Identities=14%  Similarity=0.197  Sum_probs=97.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|....+|+|++|.|+++..++.++|+|||.+......     .....++..|+|||.+.+..++.++|+||+||+++++
T Consensus       146 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el  225 (288)
T cd05050         146 LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI  225 (288)
T ss_pred             HHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHH
Confidence            56666799999999999999999999999998765322     1223445679999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      ..+....+..  +..                                       ...+...+
T Consensus       226 ~~~~~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~~  258 (288)
T cd05050         226 FSYGMQPYYGMA------HEEVIYYVRD--GNV---------------------------------------LSCPDNCP  258 (288)
T ss_pred             HhCCCCCCCCCC------HHHHHHHHhc--CCC---------------------------------------CCCCCCCC
Confidence            97 777876422      1121111110  000                                       00122344


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+|+.+||+.+|.+|||+.|+++
T Consensus       259 ~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         259 LELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHH
Confidence            56789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.87  E-value=7.8e-22  Score=150.68  Aligned_cols=135  Identities=10%  Similarity=0.188  Sum_probs=99.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CC--CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FT--EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~--~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|..+++|+|+++.|++++.++.++|+|||+++.....   ..  ...++..|+|||.+.+..++.++|+||+|+++++
T Consensus       121 ~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~  200 (266)
T cd05033         121 YLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE  200 (266)
T ss_pred             HHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHH
Confidence            356667799999999999999999999999999876421   11  1234567999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||....      .......+... ..++                                        .+...
T Consensus       201 l~~~g~~p~~~~~------~~~~~~~~~~~-~~~~----------------------------------------~~~~~  233 (266)
T cd05033         201 VMSYGERPYWDMS------NQDVIKAVEDG-YRLP----------------------------------------PPMDC  233 (266)
T ss_pred             HHccCCCCCCCCC------HHHHHHHHHcC-CCCC----------------------------------------CCCCC
Confidence            987 888886432      12211111110 0000                                        11223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.+|++|||+.+++++
T Consensus       234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         234 PSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            4567899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.87  E-value=7.8e-22  Score=150.23  Aligned_cols=133  Identities=13%  Similarity=0.153  Sum_probs=98.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|+++.|++++.++.++|+|||.+.......    ....++..|+|||...+..++.++|+||+|+++++++
T Consensus       118 lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~  197 (260)
T cd05069         118 IERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV  197 (260)
T ss_pred             HHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHH
Confidence            566667999999999999999999999999997664321    1224556799999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||....      ..+....+...   ...                                      ..+...+.
T Consensus       198 t~g~~p~~~~~------~~~~~~~~~~~---~~~--------------------------------------~~~~~~~~  230 (260)
T cd05069         198 TKGRVPYPGMV------NREVLEQVERG---YRM--------------------------------------PCPQGCPE  230 (260)
T ss_pred             hCCCCCCCCCC------HHHHHHHHHcC---CCC--------------------------------------CCCcccCH
Confidence            9 888886432      22222222110   000                                      01123345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||..||++|||++++++
T Consensus       231 ~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         231 SLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            6789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.87  E-value=3.8e-22  Score=152.81  Aligned_cols=133  Identities=13%  Similarity=0.180  Sum_probs=96.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCC--CCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTE--DVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-  105 (214)
                      +|...++|+|++|+|++++.++.+|++|||++.........  ...+..|+|||++.+..++.++|+||+||+++++++ 
T Consensus       128 lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~  207 (270)
T cd05047         128 LSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  207 (270)
T ss_pred             HHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcC
Confidence            56667799999999999999999999999998644322111  223456999999988889999999999999999996 


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      .......+..   ..         .                             ...+...+.++
T Consensus       208 g~~pf~~~~------~~~~~~~~~~---~~---------~-----------------------------~~~~~~~~~~~  240 (270)
T cd05047         208 GGTPYCGMT------CAELYEKLPQ---GY---------R-----------------------------LEKPLNCDDEV  240 (270)
T ss_pred             CCCCccccC------HHHHHHHHhC---CC---------C-----------------------------CCCCCcCCHHH
Confidence            889986422      1111111100   00         0                             00112234467


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+++.+||..||.+|||+.++++
T Consensus       241 ~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         241 YDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHHcccChhhCCCHHHHHH
Confidence            89999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=9e-22  Score=150.18  Aligned_cols=131  Identities=13%  Similarity=0.146  Sum_probs=94.3

Q ss_pred             ccccccccccccccccccCCCcc-------eEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFL-------FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~-------~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l  100 (214)
                      +|...++|+|++|+||++..++.       ++++|||.+...... ....++..|+|||.+.+ ..++.++||||+||++
T Consensus       121 lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l  199 (262)
T cd05077         121 LEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTL  199 (262)
T ss_pred             hhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence            56667799999999999976654       899999998655433 23467888999999874 5689999999999999


Q ss_pred             HHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        101 FELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       101 ~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +++++ |..||....       ........   ...                                       .....
T Consensus       200 ~el~~~~~~p~~~~~-------~~~~~~~~---~~~---------------------------------------~~~~~  230 (262)
T cd05077         200 WEICYNGEIPLKDKT-------LAEKERFY---EGQ---------------------------------------CMLVT  230 (262)
T ss_pred             HHHHhCCCCCCCCcc-------hhHHHHHH---hcC---------------------------------------ccCCC
Confidence            99984 777775321       11111100   000                                       00011


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ....++.+|+.+||+.||.+||++.+++++
T Consensus       231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         231 PSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            223467899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.87  E-value=8.3e-22  Score=149.33  Aligned_cols=133  Identities=14%  Similarity=0.177  Sum_probs=96.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCC-----CCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTE-----DVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++|.||++..++.+||+|||.+.........     ..++..|+|||.+.+..++.++|+||+||+++++
T Consensus       110 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~  189 (252)
T cd05084         110 LESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEA  189 (252)
T ss_pred             HHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHH
Confidence            56667799999999999999999999999998765432111     1223469999999888899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      . ............                                        ...+...+
T Consensus       190 ~~~~~~p~~~~~------~-~~~~~~~~~~~~----------------------------------------~~~~~~~~  222 (252)
T cd05084         190 FSLGAVPYANLS------N-QQTREAIEQGVR----------------------------------------LPCPELCP  222 (252)
T ss_pred             HhCCCCCccccC------H-HHHHHHHHcCCC----------------------------------------CCCcccCC
Confidence            97 878885322      1 111111110000                                        00122334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+|+.+||+.+|++|||+.++++
T Consensus       223 ~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         223 DAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            56789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.87  E-value=1.2e-21  Score=146.94  Aligned_cols=140  Identities=24%  Similarity=0.296  Sum_probs=106.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|+++.|+++..++.++++|||.+.....  ......++..|++||...+..++.++|+||+|++++++++|
T Consensus       103 lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~  182 (244)
T smart00220      103 LHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTG  182 (244)
T ss_pred             HHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence            5566779999999999999999999999999987754  34556788899999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||....      ....+.....   .......                                   ......+..+.
T Consensus       183 ~~p~~~~~------~~~~~~~~~~---~~~~~~~-----------------------------------~~~~~~~~~~~  218 (244)
T smart00220      183 KPPFPGDD------QLLELFKKIG---KPKPPFP-----------------------------------PPEWKISPEAK  218 (244)
T ss_pred             CCCCCCCC------cHHHHHHHHh---ccCCCCc-----------------------------------cccccCCHHHH
Confidence            99986422      1222222111   1000000                                   00001445678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +++.+||..+|++||++.++++||||
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhhCCCC
Confidence            99999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.86  E-value=1.6e-21  Score=147.58  Aligned_cols=133  Identities=11%  Similarity=0.171  Sum_probs=97.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+..+|+|++++||++..++.++++|||++........    ...++..|+|||++.+..++.++|+||+|+++++++
T Consensus       109 lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~  188 (250)
T cd05085         109 LESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF  188 (250)
T ss_pred             HHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHh
Confidence            5666779999999999999999999999999875533211    123355699999998888899999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+..      .......+..   ...                                      ...+...+.
T Consensus       189 ~~g~~p~~~~~------~~~~~~~~~~---~~~--------------------------------------~~~~~~~~~  221 (250)
T cd05085         189 SLGVCPYPGMT------NQQAREQVEK---GYR--------------------------------------MSCPQKCPD  221 (250)
T ss_pred             cCCCCCCCCCC------HHHHHHHHHc---CCC--------------------------------------CCCCCCCCH
Confidence            8 888886432      1111111110   000                                      001123445


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||..+|++|||+.++++
T Consensus       222 ~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         222 DVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHH
Confidence            7789999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.86  E-value=8.1e-22  Score=153.72  Aligned_cols=134  Identities=16%  Similarity=0.211  Sum_probs=98.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+||+++.++.++|+|||.++.....     .....++..|+|||.+.+..++.++|+||+||+++++
T Consensus       156 lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el  235 (307)
T cd05098         156 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI  235 (307)
T ss_pred             HHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHH
Confidence            56667799999999999999999999999998765421     1112344679999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+       ...+...... +..                                       ...+...+
T Consensus       236 ~~~g~~p~~~~~-------~~~~~~~~~~-~~~---------------------------------------~~~~~~~~  268 (307)
T cd05098         236 FTLGGSPYPGVP-------VEELFKLLKE-GHR---------------------------------------MDKPSNCT  268 (307)
T ss_pred             HcCCCCCCCcCC-------HHHHHHHHHc-CCC---------------------------------------CCCCCcCC
Confidence            98 778885322       2222222111 000                                       00122345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+|+.+||..+|++|||+.+++++
T Consensus       269 ~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         269 NELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            577899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=9.9e-22  Score=152.36  Aligned_cols=140  Identities=14%  Similarity=0.162  Sum_probs=98.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+|++++.++.+||+|||++......     .....++..|+|||.+.+..++.++|+||+||+++++
T Consensus       145 lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el  224 (295)
T cd05097         145 LASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEM  224 (295)
T ss_pred             HHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHH
Confidence            56667799999999999999999999999999765322     1222446689999999988899999999999999999


Q ss_pred             hh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        104 AT--GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       104 ~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++  +..||...+      ....+..+.........         ..+                         ...+...
T Consensus       225 ~~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~---------~~~-------------------------~~~~~~~  264 (295)
T cd05097         225 FTLCKEQPYSLLS------DEQVIENTGEFFRNQGR---------QIY-------------------------LSQTPLC  264 (295)
T ss_pred             HHcCCCCCCcccC------hHHHHHHHHHhhhhccc---------ccc-------------------------CCCCCCC
Confidence            87  556775322      22222222221100000         000                         0011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||..||++|||++++++
T Consensus       265 ~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         265 PSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            457889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.86  E-value=6.5e-22  Score=156.05  Aligned_cols=135  Identities=17%  Similarity=0.198  Sum_probs=99.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|++|.||++..++.+||+|||+++......     ....++..|+|||++.+..++.++||||+||++++
T Consensus       149 ~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  228 (334)
T cd05100         149 YLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWE  228 (334)
T ss_pred             HHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHH
Confidence            3566778999999999999999999999999998664321     12233457999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ..+....+..  +..                                       ...+...
T Consensus       229 l~~~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~  261 (334)
T cd05100         229 IFTLGGSPYPGIP------VEELFKLLKE--GHR---------------------------------------MDKPANC  261 (334)
T ss_pred             HHhcCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCCCCC
Confidence            998 778886432      1111111110  000                                       0011233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.+|.+|||+.+++++
T Consensus       262 ~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         262 THELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            4567899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.86  E-value=9.1e-22  Score=149.80  Aligned_cols=133  Identities=11%  Similarity=0.201  Sum_probs=99.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|+++.|++++.++.+||+|||.+.......   ....++..|++||.+.+..++.++|+||+|++++++++
T Consensus       120 lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~  199 (261)
T cd05148         120 LEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT  199 (261)
T ss_pred             HHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHc
Confidence            566677999999999999999999999999997664321   12234567999999988889999999999999999998


Q ss_pred             -CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        106 -GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       106 -g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                       |..||...+      ..+.+..+.... .+                                        ..+..++..
T Consensus       200 ~g~~p~~~~~------~~~~~~~~~~~~-~~----------------------------------------~~~~~~~~~  232 (261)
T cd05148         200 YGQVPYPGMN------NHEVYDQITAGY-RM----------------------------------------PCPAKCPQE  232 (261)
T ss_pred             CCCCCCCcCC------HHHHHHHHHhCC-cC----------------------------------------CCCCCCCHH
Confidence             788886433      222222222100 00                                        012334456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +.+++.+||+.||++|||++++++
T Consensus       233 ~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         233 IYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHH
Confidence            789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=7.9e-22  Score=150.22  Aligned_cols=133  Identities=12%  Similarity=0.171  Sum_probs=98.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-CCCCc---CCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-TEDVQ---TRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-~~~~~---~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++++||++..++.++|+|||++....... ....|   +..|+|||.+.+..++.++|+||+|+++++++
T Consensus       119 lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~  198 (261)
T cd05068         119 LEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIV  198 (261)
T ss_pred             HHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHH
Confidence            455667999999999999999999999999998765321 11222   34699999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+      ....+..+.+. ..+                                        ..+...+.
T Consensus       199 t~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~~~  231 (261)
T cd05068         199 TYGRMPYPGMT------NAEVLQQVDQG-YRM----------------------------------------PCPPGCPK  231 (261)
T ss_pred             hcCCCCCCCCC------HHHHHHHHHcC-CCC----------------------------------------CCCCcCCH
Confidence            8 888886432      22222222110 000                                        01123345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||+.+|.+||+++++++
T Consensus       232 ~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         232 ELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHHH
Confidence            6789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.86  E-value=2.3e-21  Score=147.10  Aligned_cols=134  Identities=13%  Similarity=0.154  Sum_probs=99.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCC----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|...++|+|+++.|++++.++.++|+|||.+........    ...++..|+|||.+.+..++.++|+||+|++++++
T Consensus       118 ~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l  197 (258)
T smart00219      118 YLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEI  197 (258)
T ss_pred             HHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHH
Confidence            35666779999999999999999999999999987654311    12366789999999777899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |.+||...+      .......+...  ...                                       ..+...+
T Consensus       198 ~~~g~~p~~~~~------~~~~~~~~~~~--~~~---------------------------------------~~~~~~~  230 (258)
T smart00219      198 FTLGESPYPGMS------NEEVLEYLKKG--YRL---------------------------------------PKPENCP  230 (258)
T ss_pred             HhCCCCCCCCCC------HHHHHHHHhcC--CCC---------------------------------------CCCCcCC
Confidence            98 778886422      12222211110  000                                       0112245


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      231 PEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            56789999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.86  E-value=1.7e-21  Score=149.12  Aligned_cols=133  Identities=14%  Similarity=0.274  Sum_probs=98.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|++++|+++..++.++|+|||+++......    ....++..|+|||.+.+..++.++|+||+||++++++
T Consensus       123 lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~  202 (270)
T cd05056         123 LESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL  202 (270)
T ss_pred             HHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence            566667999999999999999999999999987654321    1123345799999998888999999999999999988


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+      ..+....+..  +..                                       ...+...+.
T Consensus       203 ~~g~~pf~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~~~  235 (270)
T cd05056         203 MLGVKPFQGVK------NNDVIGRIEN--GER---------------------------------------LPMPPNCPP  235 (270)
T ss_pred             HcCCCCCCCCC------HHHHHHHHHc--CCc---------------------------------------CCCCCCCCH
Confidence            6 999997543      2222222110  000                                       001233455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+|+..+|++|||+.+++.
T Consensus       236 ~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         236 TLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.86  E-value=9.4e-22  Score=151.30  Aligned_cols=133  Identities=16%  Similarity=0.174  Sum_probs=98.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|+|++|+|+++..++.+||+|||+++.....     .....++..|+|||.+.+..++.++||||+||+++++
T Consensus       133 LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el  212 (280)
T cd05043         133 LHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL  212 (280)
T ss_pred             HHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence            55666799999999999999999999999999765321     1223456679999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      . ..+......  ...                                      ...+..++
T Consensus       213 ~~~g~~p~~~~~------~-~~~~~~~~~--~~~--------------------------------------~~~~~~~~  245 (280)
T cd05043         213 MTLGQTPYVEID------P-FEMAAYLKD--GYR--------------------------------------LAQPINCP  245 (280)
T ss_pred             hcCCCCCcCcCC------H-HHHHHHHHc--CCC--------------------------------------CCCCCcCC
Confidence            98 999986432      1 112111110  000                                      00112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+++.+||..||++|||+.++++
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         246 DELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            56789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.86  E-value=1.4e-21  Score=149.44  Aligned_cols=134  Identities=10%  Similarity=0.138  Sum_probs=98.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCC------CCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTE------DVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|..+++|+|++++|+++..++.++++|||++.........      ...+..|+|||.+.+..++.++|+||+||+++
T Consensus       122 ~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~  201 (268)
T cd05063         122 YLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMW  201 (268)
T ss_pred             HHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHH
Confidence            356677799999999999999999999999999766432111      12234699999999888999999999999999


Q ss_pred             HHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        102 ELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       102 ~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++++ |..||...+      ..+....+... ...+                                        .+..
T Consensus       202 ell~~g~~p~~~~~------~~~~~~~i~~~-~~~~----------------------------------------~~~~  234 (268)
T cd05063         202 EVMSFGERPYWDMS------NHEVMKAINDG-FRLP----------------------------------------APMD  234 (268)
T ss_pred             HHHhCCCCCCCcCC------HHHHHHHHhcC-CCCC----------------------------------------CCCC
Confidence            9987 998986432      22222222110 0000                                        0122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+..+.+++.+||+.+|++||++.++++
T Consensus       235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         235 CPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            3456789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.86  E-value=1.9e-21  Score=159.05  Aligned_cols=151  Identities=9%  Similarity=0.047  Sum_probs=97.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CC--CCCcCCcccchHHHhcCC------------------
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FT--EDVQTRQYRSLEVLINAG------------------   86 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~--~~~~~~~y~aPE~~~~~~------------------   86 (214)
                      +|...++|+|+|+.||++..++.+||+|||++......  ..  ...+++.|+|||.+....                  
T Consensus       325 lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~  404 (507)
T PLN03224        325 LHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFA  404 (507)
T ss_pred             HHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhH
Confidence            56666799999999999999999999999999765322  11  224578999999986432                  


Q ss_pred             --CC--cchhhHHHHHHHHHHhhCCC-CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCC
Q psy16751         87 --YD--CSADIWSVACMAFELATGDY-LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPG  161 (214)
Q Consensus        87 --~~--~~~Diws~G~~l~~l~~g~~-~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (214)
                        |+  ...|+||+||++++|+++.. +|....         ......+.....-..|.. ......             
T Consensus       405 ~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~---------~f~~~~~~~~~~~~~~r~-~~~~~~-------------  461 (507)
T PLN03224        405 WLYGRPDLFDSYTAGVLLMQMCVPELRPVANIR---------LFNTELRQYDNDLNRWRM-YKGQKY-------------  461 (507)
T ss_pred             HhcCCCCccchhhHHHHHHHHHhCCCCCccchh---------hhhhHHhhccchHHHHHh-hcccCC-------------
Confidence              22  24799999999999999874 554211         111111110000000000 000000             


Q ss_pred             CCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCC---CCCCCHHHHhcCCCCCC
Q psy16751        162 LKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDP---KLRATAADCLQHPWLQN  214 (214)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp---~~R~t~~e~l~hp~f~~  214 (214)
                                  .+...+..+....||+.+||+.+|   ++|+|++|+|+||||..
T Consensus       462 ------------~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        462 ------------DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             ------------CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence                        001123345677899999999866   68999999999999963

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=1.8e-21  Score=147.84  Aligned_cols=130  Identities=13%  Similarity=0.120  Sum_probs=94.9

Q ss_pred             ccccccccccccccccccCCCc-------ceEEeecCCceeccCCCCCCCcCCcccchHHHhcC--CCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPF-------LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA--GYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~   99 (214)
                      +|..+++|+|++|.||+++..+       .+||+|||++..... .....++..|+|||.+.+.  .++.++|+||+||+
T Consensus       117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~  195 (259)
T cd05037         117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTT  195 (259)
T ss_pred             HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence            5666779999999999998877       799999999986654 2334667789999999887  68899999999999


Q ss_pred             HHHHhhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        100 AFELATG-DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       100 l~~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++++++| ..||...+      ........ ..  .                                        ...+
T Consensus       196 ~~~l~~~~~~p~~~~~------~~~~~~~~-~~--~----------------------------------------~~~~  226 (259)
T cd05037         196 LLEICSNGEEPLSTLS------SSEKERFY-QD--Q----------------------------------------HRLP  226 (259)
T ss_pred             HHHHHhCCCCCcccCC------chhHHHHH-hc--C----------------------------------------CCCC
Confidence            9999994 66664321      00100000 00  0                                        0001


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ......+.+++.+||+.+|.+|||+.++++
T Consensus       227 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         227 MPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            111256789999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=2.2e-21  Score=147.65  Aligned_cols=132  Identities=12%  Similarity=0.143  Sum_probs=94.9

Q ss_pred             cccccccccccccccccccCCCcc--------eEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFL--------FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVAC   98 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~   98 (214)
                      .+|...++|+|+++.||++..++.        ++++|||.+...... ....++..|+|||.+.+. .++.++|+||+||
T Consensus       115 ~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  193 (258)
T cd05078         115 FLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK-EILLERIPWVPPECIENPQNLSLAADKWSFGT  193 (258)
T ss_pred             HHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc-hhccccCCccCchhccCCCCCCchhhHHHHHH
Confidence            456677799999999999977654        699999998655332 234678889999999875 5889999999999


Q ss_pred             HHHHHhhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         99 MAFELATGD-YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        99 ~l~~l~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      +++++++|. ++|...+      ...... ...   .                                       ....
T Consensus       194 ~l~~l~~g~~~~~~~~~------~~~~~~-~~~---~---------------------------------------~~~~  224 (258)
T cd05078         194 TLWEIFSGGDKPLSALD------SQKKLQ-FYE---D---------------------------------------RHQL  224 (258)
T ss_pred             HHHHHHcCCCCChhhcc------HHHHHH-HHH---c---------------------------------------cccC
Confidence            999999985 5554211      111110 000   0                                       0001


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +.....++.+|+.+||+.||++|||++++++.
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         225 PAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             CCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            22233567899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.86  E-value=1.5e-21  Score=157.14  Aligned_cols=135  Identities=11%  Similarity=0.118  Sum_probs=98.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|...++|+|++|.||+++.++.+||+|||+++.....     .....++..|+|||.+.+..++.++||||+||++++
T Consensus       252 ~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~e  331 (400)
T cd05105         252 FLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWE  331 (400)
T ss_pred             HHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHH
Confidence            356667799999999999999999999999999865322     122356678999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||....      ....+...... +..                                       ...+...
T Consensus       332 llt~g~~P~~~~~------~~~~~~~~~~~-~~~---------------------------------------~~~~~~~  365 (400)
T cd05105         332 IFSLGGTPYPGMI------VDSTFYNKIKS-GYR---------------------------------------MAKPDHA  365 (400)
T ss_pred             HHHCCCCCCcccc------hhHHHHHHHhc-CCC---------------------------------------CCCCccC
Confidence            996 888886422      11111111110 000                                       0011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.||++|||+.++.+
T Consensus       366 ~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         366 TQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            456789999999999999999988765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.5e-21  Score=148.65  Aligned_cols=133  Identities=13%  Similarity=0.157  Sum_probs=99.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.+.++|+|+++.|++++.++.++++|||.+.......    ....++..|+|||.+.+..++.++|+||+||++++++
T Consensus       119 lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~  198 (261)
T cd05034         119 LESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIV  198 (261)
T ss_pred             HHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHH
Confidence            566677999999999999999999999999998664321    1123456799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+      ....+..+......                                         ..+...+.
T Consensus       199 t~g~~p~~~~~------~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~  231 (261)
T cd05034         199 TYGRVPYPGMT------NREVLEQVERGYRM-----------------------------------------PRPPNCPE  231 (261)
T ss_pred             hCCCCCCCCCC------HHHHHHHHHcCCCC-----------------------------------------CCCCCCCH
Confidence            8 888986432      22233322111000                                         01122345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+++.+||+.+|++|||++++.+
T Consensus       232 ~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         232 ELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHH
Confidence            6789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.86  E-value=1.8e-21  Score=154.05  Aligned_cols=135  Identities=13%  Similarity=0.167  Sum_probs=98.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|+||.||+++.++.+||+|||++......     .....++..|+|||.+.+..++.++|+||+|++++++
T Consensus       195 lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  274 (343)
T cd05103         195 LASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI  274 (343)
T ss_pred             HHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHH
Confidence            56777799999999999999999999999999765321     1122345679999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ....+...... +...                                       ..+...+
T Consensus       275 ~~~g~~p~~~~~------~~~~~~~~~~~-~~~~---------------------------------------~~~~~~~  308 (343)
T cd05103         275 FSLGASPYPGVK------IDEEFCRRLKE-GTRM---------------------------------------RAPDYTT  308 (343)
T ss_pred             HHCCCCCCCCcc------ccHHHHHHHhc-cCCC---------------------------------------CCCCCCC
Confidence            96 888885322      11111111110 0000                                       0011123


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||+.||++|||+.++++|
T Consensus       309 ~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         309 PEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            467899999999999999999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.85  E-value=3.8e-21  Score=149.16  Aligned_cols=141  Identities=12%  Similarity=0.147  Sum_probs=97.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|..+++|+|++|+||++..++.++|+|||+++.....     .....++..|++||...+..++.++|+||+||++++
T Consensus       145 ~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~e  224 (296)
T cd05095         145 YLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWE  224 (296)
T ss_pred             HHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHH
Confidence            356666799999999999999999999999999765322     112234567999999988889999999999999999


Q ss_pred             Hhh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        103 LAT--GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       103 l~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++  |..||...+      ..+.+....+..       ....  ...         .                ...+..
T Consensus       225 l~~~~~~~p~~~~~------~~~~~~~~~~~~-------~~~~--~~~---------~----------------~~~~~~  264 (296)
T cd05095         225 ILTLCKEQPYSQLS------DEQVIENTGEFF-------RDQG--RQV---------Y----------------LPKPAL  264 (296)
T ss_pred             HHHhCCCCCccccC------hHHHHHHHHHHH-------hhcc--ccc---------c----------------CCCCCC
Confidence            998  667775322      112111111100       0000  000         0                001123


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++..+.+|+.+||+.||++|||+.++++
T Consensus       265 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         265 CPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            4467789999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.85  E-value=3.9e-21  Score=146.35  Aligned_cols=133  Identities=10%  Similarity=0.137  Sum_probs=97.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|+++.|+++...+.++|+|||.+.......    ....++..|+|||++.+..++.++|+||+||++++++
T Consensus       118 lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  197 (260)
T cd05073         118 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV  197 (260)
T ss_pred             HHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHH
Confidence            555667999999999999999999999999997654221    1123456699999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      .......+.   +....                                      ..+...+.
T Consensus       198 t~g~~p~~~~~------~~~~~~~~~---~~~~~--------------------------------------~~~~~~~~  230 (260)
T cd05073         198 TYGRIPYPGMS------NPEVIRALE---RGYRM--------------------------------------PRPENCPE  230 (260)
T ss_pred             hcCCCCCCCCC------HHHHHHHHh---CCCCC--------------------------------------CCcccCCH
Confidence            8 888886432      111111111   00000                                      01123345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++.+++.+||+.+|++||++.++++
T Consensus       231 ~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         231 ELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHH
Confidence            6789999999999999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.85  E-value=1.3e-21  Score=167.83  Aligned_cols=85  Identities=14%  Similarity=0.077  Sum_probs=73.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---------------------CCCCCCcCCcccchHHHhcCC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---------------------HFTEDVQTRQYRSLEVLINAG   86 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---------------------~~~~~~~~~~y~aPE~~~~~~   86 (214)
                      .+|..+++|+|+||+||+++.++.++|+|||++.....                     .....+||+.|+|||.+.+..
T Consensus       128 yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~  207 (932)
T PRK13184        128 YVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP  207 (932)
T ss_pred             HHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC
Confidence            35667789999999999999999999999999986511                     011247999999999999989


Q ss_pred             CCcchhhHHHHHHHHHHhhCCCCCCC
Q psy16751         87 YDCSADIWSVACMAFELATGDYLFEP  112 (214)
Q Consensus        87 ~~~~~Diws~G~~l~~l~~g~~~f~~  112 (214)
                      ++.++||||+||+++++++|..||..
T Consensus       208 ~S~kSDIWSLGVILyELLTG~~PF~~  233 (932)
T PRK13184        208 ASESTDIYALGVILYQMLTLSFPYRR  233 (932)
T ss_pred             CCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            99999999999999999999999964

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=1.8e-21  Score=150.04  Aligned_cols=147  Identities=14%  Similarity=0.163  Sum_probs=99.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|...++|+|++|+||+++.++.++|+|||+++......      ....++..|+|||.+.+..++.++||||+|+++++
T Consensus       123 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~e  202 (283)
T cd05080         123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYE  202 (283)
T ss_pred             HHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHH
Confidence            566677999999999999999999999999998664321      12245567999999988889999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHH-hCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIEL-LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++|..||.....        .+..+... .+.............              .           .....+...
T Consensus       203 l~tg~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--------------~-----------~~~~~~~~~  249 (283)
T cd05080         203 LLTHCDSKQSPPK--------KFEEMIGPKQGQMTVVRLIELLER--------------G-----------MRLPCPKNC  249 (283)
T ss_pred             HHhCCCCCCCCcc--------hhhhhhcccccccchhhhhhhhhc--------------C-----------CCCCCCCCC
Confidence            9999988753221        00000000 000000000000000              0           000112344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|++|||++++++
T Consensus       250 ~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         250 PQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            567889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0695|consensus

Probab=99.85  E-value=2.2e-21  Score=146.62  Aligned_cols=149  Identities=19%  Similarity=0.196  Sum_probs=116.5

Q ss_pred             hhhcccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         25 IRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        25 ~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .-|.+|...++.||+|-.|++++..|.+|+.|+|+++.-   ++..++.+|||-|.|||++.|..|+.++|.|++||+++
T Consensus       363 al~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmf  442 (593)
T KOG0695|consen  363 ALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMF  442 (593)
T ss_pred             HHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHH
Confidence            456788888899999999999999999999999998754   45567789999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        102 ELATGDYLFEPHAGDTYTRD-EDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ||+.|+.||.-...+....+ .+.+.+                                         .++.+....|..
T Consensus       443 emmagrspfdivgm~n~d~ntedylfq-----------------------------------------vilekqiriprs  481 (593)
T KOG0695|consen  443 EMMAGRSPFDIVGMDNPDMNTEDYLFQ-----------------------------------------VILEKQIRIPRS  481 (593)
T ss_pred             HHHcCCCCcceecCCCcccchhHHHHH-----------------------------------------HHhhhcccccce
Confidence            99999999963221111111 122222                                         222233344556


Q ss_pred             hHHHHHHHHHHccccCCCCCCC------HHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRAT------AADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t------~~e~l~hp~f~~  214 (214)
                      .+..+..++...|+.||.+|..      ..++..|+||++
T Consensus       482 lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  482 LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            6666678999999999999974      688999999974

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.85  E-value=3e-21  Score=147.54  Aligned_cols=133  Identities=17%  Similarity=0.242  Sum_probs=98.1

Q ss_pred             ccccccccccccccccccCCCc-----ceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPF-----LFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVAC   98 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~-----~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~   98 (214)
                      +|...++|+|++++||+++.++     .++++|||++......     .....++..|+|||.+.+..++.++||||+||
T Consensus       122 lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  201 (269)
T cd05044         122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGV  201 (269)
T ss_pred             HHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHH
Confidence            5566679999999999998877     8999999998765321     12234567899999999888999999999999


Q ss_pred             HHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         99 MAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        99 ~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      +++++++ |..||...+      ..+....+. ..+.                                        ...
T Consensus       202 il~ellt~g~~p~~~~~------~~~~~~~~~-~~~~----------------------------------------~~~  234 (269)
T cd05044         202 LMWEILTLGQQPYPALN------NQEVLQHVT-AGGR----------------------------------------LQK  234 (269)
T ss_pred             HHHHHHHcCCCCCcccC------HHHHHHHHh-cCCc----------------------------------------cCC
Confidence            9999997 888886432      222221111 0000                                        001


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +...+..+.+++.+||+.+|.+|||++++++
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            2334557789999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.85  E-value=5.1e-21  Score=146.03  Aligned_cols=136  Identities=20%  Similarity=0.280  Sum_probs=99.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|...++|+|++++||+++.++.++|+|||.+......   .....++..|+|||.+.+..++.++|+||+||+++++++
T Consensus       122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~  201 (267)
T cd08224         122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA  201 (267)
T ss_pred             HHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH
Confidence            56667799999999999999999999999998765432   223468888999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.....     ....+...... +..++                     .                 .....+..+
T Consensus       202 g~~p~~~~~~-----~~~~~~~~~~~-~~~~~---------------------~-----------------~~~~~~~~~  237 (267)
T cd08224         202 LQSPFYGDKM-----NLYSLCKKIEK-CDYPP---------------------L-----------------PADHYSEEL  237 (267)
T ss_pred             CCCCcccCCc-----cHHHHHhhhhc-CCCCC---------------------C-----------------ChhhcCHHH
Confidence            9999864321     11111100000 00000                     0                 011334567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+++.+||..+|++|||+.++++
T Consensus       238 ~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         238 RDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHH
Confidence            89999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.85  E-value=1.7e-21  Score=150.22  Aligned_cols=150  Identities=13%  Similarity=0.203  Sum_probs=99.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|...++|+|++|.||++..++.++|+|||+++......      ....++..|+|||.+.+..++.++||||+||+++
T Consensus       124 ~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~  203 (284)
T cd05079         124 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLY  203 (284)
T ss_pred             HHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhh
Confidence            4667777999999999999999999999999998664321      2335666799999998888999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++++..++....        .   ......++...+.....  ...... ..                  .....+...
T Consensus       204 ellt~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~--~~~~~~-~~------------------~~~~~~~~~  251 (284)
T cd05079         204 ELLTYCDSESSPM--------T---LFLKMIGPTHGQMTVTR--LVRVLE-EG------------------KRLPRPPNC  251 (284)
T ss_pred             hhhcCCCCCcccc--------c---hhhhhcccccccccHHH--HHHHHH-cC------------------ccCCCCCCC
Confidence            9999765543110        0   01111111110000000  000000 00                  000112334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||+.||.+|||++++++.
T Consensus       252 ~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         252 PEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            5678899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.85  E-value=3.4e-21  Score=147.34  Aligned_cols=136  Identities=19%  Similarity=0.245  Sum_probs=94.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhc-------CCCCcchhhHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLIN-------AGYDCSADIWSV   96 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~-------~~~~~~~Diws~   96 (214)
                      +|...++|+|+||.|++++.++.+||+|||++......     .....++..|+|||++..       ..++.++||||+
T Consensus       116 lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl  195 (269)
T cd05042         116 LHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSL  195 (269)
T ss_pred             HHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHH
Confidence            56667799999999999999999999999998754221     122345667999999864       246789999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCC-CChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         97 ACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGD-IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        97 G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      ||+++++++ |..||....      +.+.+......... ++.                      +              
T Consensus       196 G~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~----------------------~--------------  233 (269)
T cd05042         196 GVTMWELFTAADQPYPDLS------DEQVLKQVVREQDIKLPK----------------------P--------------  233 (269)
T ss_pred             HHHHHHHHhCCCCCCCcCC------HHHHHHHHhhccCccCCC----------------------C--------------
Confidence            999999998 677775432      23333332221100 000                      0              


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                       ..+...+..+.+++..|+ .||++|||+++++.
T Consensus       234 -~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         234 -QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             -cccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence             011233445678888888 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.85  E-value=1.4e-21  Score=148.84  Aligned_cols=133  Identities=13%  Similarity=0.206  Sum_probs=95.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..+++|++++++||+++.++.+||+|||++......     .....+...|+|||.+.+..++.++||||||++++|+
T Consensus       119 Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei  198 (259)
T PF07714_consen  119 LHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEI  198 (259)
T ss_dssp             HHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            55566799999999999999999999999999877322     1223566679999999998899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      ..+....+.+. ..                                        ...+..++
T Consensus       199 ~~~~~~p~~~~~------~~~~~~~~~~~-~~----------------------------------------~~~~~~~~  231 (259)
T PF07714_consen  199 LTLGKFPFSDYD------NEEIIEKLKQG-QR----------------------------------------LPIPDNCP  231 (259)
T ss_dssp             HTTSSGTTTTSC------HHHHHHHHHTT-EE----------------------------------------TTSBTTSB
T ss_pred             cccccccccccc------ccccccccccc-cc----------------------------------------ceeccchh
Confidence            99 678875432      22222222110 00                                        01123445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+||..||++|||+.++++
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            66789999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=4.4e-21  Score=146.96  Aligned_cols=135  Identities=12%  Similarity=0.168  Sum_probs=99.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|...++|+|++|+|+++..++.+|++|||.++.....     .....+++.|++||.+.+..++.++||||+||++++
T Consensus       128 ~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~e  207 (273)
T cd05074         128 YLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWE  207 (273)
T ss_pred             HHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHH
Confidence            356677799999999999999999999999999866322     122345567999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |.++|.+.+      . ..+.........+                                        ..+...
T Consensus       208 l~~~g~~p~~~~~------~-~~~~~~~~~~~~~----------------------------------------~~~~~~  240 (273)
T cd05074         208 IMTRGQTPYAGVE------N-SEIYNYLIKGNRL----------------------------------------KQPPDC  240 (273)
T ss_pred             HhhCCCCCCCCCC------H-HHHHHHHHcCCcC----------------------------------------CCCCCC
Confidence            998 788886432      1 1111111100000                                        011223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||..+|++|||+.++++.
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4567899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4257|consensus

Probab=99.85  E-value=2e-21  Score=156.72  Aligned_cols=132  Identities=12%  Similarity=0.246  Sum_probs=103.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC--CCCcCC--cccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT--EDVQTR--QYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~--~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +++...+|||+..+|||+.+..-||++|||+++.+....+  ...|..  -|||||.+.-++++.++|||-|||++||++
T Consensus       507 LeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl  586 (974)
T KOG4257|consen  507 LESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEIL  586 (974)
T ss_pred             HHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHH
Confidence            3444457999999999999999999999999998865432  223433  499999999999999999999999999988


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      . |.-||.+-.+.+++...+                  ++                             .+.+.|+.|++
T Consensus       587 ~lGvkPfqgvkNsDVI~~iE------------------nG-----------------------------eRlP~P~nCPp  619 (974)
T KOG4257|consen  587 SLGVKPFQGVKNSDVIGHIE------------------NG-----------------------------ERLPCPPNCPP  619 (974)
T ss_pred             HhcCCccccccccceEEEec------------------CC-----------------------------CCCCCCCCCCh
Confidence            7 889998766433222111                  00                             02246788999


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHh
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      .+..|+.+||.++|.+||++.++.
T Consensus       620 ~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  620 ALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HHHHHHHHHhccCcccCCcHHHHH
Confidence            999999999999999999988764

>KOG0194|consensus

Probab=99.85  E-value=1.4e-21  Score=156.49  Aligned_cols=160  Identities=13%  Similarity=0.106  Sum_probs=114.9

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhh-----cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCC-CcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRN-----ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTED-VQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~-----~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~-~~~~   74 (214)
                      +|.+||.+..+-+..+.|...-++.     .+|..+++|||+-.+|||+..++.+||+|||+++.....  .... --+.
T Consensus       247 sL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPi  326 (474)
T KOG0194|consen  247 SLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPI  326 (474)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcc
Confidence            5778888888744444433322222     278888899999999999999999999999998765421  1111 2335


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      .|+|||.+...-|+.++||||+||++||++. |..||.+..      ..+..+.+....-.                   
T Consensus       327 rWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~------~~~v~~kI~~~~~r-------------------  381 (474)
T KOG0194|consen  327 RWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK------NYEVKAKIVKNGYR-------------------  381 (474)
T ss_pred             eecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC------HHHHHHHHHhcCcc-------------------
Confidence            6999999999899999999999999999998 778887654      23333333221000                   


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                           ...+...+.....++.+|+..+|++|+|+.++.+
T Consensus       382 ---------------------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  382 ---------------------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             ---------------------CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence                                 0123345667788999999999999999988753

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.85  E-value=1e-20  Score=145.87  Aligned_cols=84  Identities=15%  Similarity=0.139  Sum_probs=68.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|..+++|+|+++.||+++.++.++|+|||++.......      ....++..|+|||.+.+..++.++|+||+||+++
T Consensus       123 ~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  202 (284)
T cd05081         123 YLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLY  202 (284)
T ss_pred             HHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHH
Confidence            3566777999999999999999999999999998663221      1112344599999998888999999999999999


Q ss_pred             HHhhCCCCCC
Q psy16751        102 ELATGDYLFE  111 (214)
Q Consensus       102 ~l~~g~~~f~  111 (214)
                      ++++|..++.
T Consensus       203 el~~~~~~~~  212 (284)
T cd05081         203 ELFTYSDKSC  212 (284)
T ss_pred             HHhhcCCcCC
Confidence            9999876553

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.84  E-value=6.9e-21  Score=145.54  Aligned_cols=133  Identities=10%  Similarity=0.148  Sum_probs=97.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC------CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT------EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|...++|+|++++|+++..++.++++|||++........      ...++..|++||.+.+..++.++|+||+||++++
T Consensus       122 lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~e  201 (267)
T cd05066         122 LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE  201 (267)
T ss_pred             HHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHH
Confidence            5666779999999999999999999999999986643211      1123457999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ..+....+.+.. .+                                        ..+...
T Consensus       202 ll~~g~~p~~~~~------~~~~~~~~~~~~-~~----------------------------------------~~~~~~  234 (267)
T cd05066         202 VMSYGERPYWEMS------NQDVIKAIEEGY-RL----------------------------------------PAPMDC  234 (267)
T ss_pred             HhcCCCCCcccCC------HHHHHHHHhCCC-cC----------------------------------------CCCCCC
Confidence            886 998886432      112111111100 00                                        001223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.+|.+|||+.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         235 PAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            456789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG4278|consensus

Probab=99.84  E-value=4.7e-21  Score=154.84  Aligned_cols=128  Identities=16%  Similarity=0.271  Sum_probs=99.6

Q ss_pred             cccccccccccccCCCcceEEeecCCceeccCC-CCCCCcC---CcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCC
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQT---RQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDY  108 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~---~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~  108 (214)
                      .+|||+..+|||+.++..||++|||+++.+... ++.-.|.   .-|.|||.+....++.++|||+|||+|||+.+ |-.
T Consensus       386 FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMs  465 (1157)
T KOG4278|consen  386 FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS  465 (1157)
T ss_pred             hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999988654 3333443   34999999998889999999999999999988 667


Q ss_pred             CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHH
Q psy16751        109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF  188 (214)
Q Consensus       109 ~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  188 (214)
                      |+.+-+       ..|....++.           ..+.                             .-+..|++.+.+|
T Consensus       466 PYPGid-------lSqVY~LLEk-----------gyRM-----------------------------~~PeGCPpkVYeL  498 (1157)
T KOG4278|consen  466 PYPGID-------LSQVYGLLEK-----------GYRM-----------------------------DGPEGCPPKVYEL  498 (1157)
T ss_pred             CCCCcc-------HHHHHHHHhc-----------cccc-----------------------------cCCCCCCHHHHHH
Confidence            776533       3333333221           1100                             1246678888999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q psy16751        189 LRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       189 l~~~l~~dp~~R~t~~e~l~  208 (214)
                      |+.||+|+|++||++.|+-+
T Consensus       499 MraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  499 MRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             HHHHhcCCcccCccHHHHHH
Confidence            99999999999999988743

>KOG1187|consensus

Probab=99.84  E-value=1.3e-20  Score=148.98  Aligned_cols=98  Identities=14%  Similarity=0.161  Sum_probs=79.5

Q ss_pred             chhhhhHHHHHHhhhcccccccccccccccccccCCCcceEEeecCCceeccC-CCCC--C-CcCCcccchHHHhcCCCC
Q psy16751         13 SLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTE--D-VQTRQYRSLEVLINAGYD   88 (214)
Q Consensus        13 ~~~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~~~~~y~aPE~~~~~~~~   88 (214)
                      +|.-...+..-|||+.+.- .++|||+|++||+++.+...||+|||+|+.... ....  . .||..|++||++.....+
T Consensus       178 kIa~g~A~gL~yLH~~~~~-~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt  256 (361)
T KOG1187|consen  178 KIALGAARGLAYLHEGCPP-PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLT  256 (361)
T ss_pred             HHHHHHHHHHHHHccCCCC-CEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcC
Confidence            4455555555667765532 468999999999999999999999999976643 2221  2 799999999999988899


Q ss_pred             cchhhHHHHHHHHHHhhCCCCCC
Q psy16751         89 CSADIWSVACMAFELATGDYLFE  111 (214)
Q Consensus        89 ~~~Diws~G~~l~~l~~g~~~f~  111 (214)
                      .++|||||||+++|+++|+.+..
T Consensus       257 ~KsDVySFGVvllElitgr~~~d  279 (361)
T KOG1187|consen  257 EKSDVYSFGVVLLELITGRKAVD  279 (361)
T ss_pred             cccccccchHHHHHHHhCCcccC
Confidence            99999999999999999997765

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.84  E-value=7.8e-21  Score=145.32  Aligned_cols=131  Identities=16%  Similarity=0.161  Sum_probs=97.7

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      .++|+|+++.||++..++.++|+|||.+......  .....|+..|++||.+.+..++.++|+||+|++++++++|..||
T Consensus       134 ~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~  213 (269)
T cd08528         134 RIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPF  213 (269)
T ss_pred             ceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcc
Confidence            3689999999999999999999999999866433  23456888999999999888999999999999999999999998


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHH
Q psy16751        111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR  190 (214)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  190 (214)
                      ...+      .......+......+.                                        .....+..+.+++.
T Consensus       214 ~~~~------~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~l~~li~  247 (269)
T cd08528         214 YSTN------MLSLATKIVEAVYEPL----------------------------------------PEGMYSEDVTDVIT  247 (269)
T ss_pred             cccC------HHHHHHHHhhccCCcC----------------------------------------CcccCCHHHHHHHH
Confidence            6322      1111111111000000                                        00123456789999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q psy16751        191 PMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       191 ~~l~~dp~~R~t~~e~l~h  209 (214)
                      +||+.||++|||+.|+..+
T Consensus       248 ~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         248 SCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHCCCCCccCCCHHHHHHH
Confidence            9999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.84  E-value=8.2e-21  Score=145.81  Aligned_cols=131  Identities=13%  Similarity=0.164  Sum_probs=93.6

Q ss_pred             ccccccccccccccccccCCCc-------ceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPF-------LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      +|...++|+|++|+||++...+       .++++|||.+...... ....++..|+|||.+.+. .++.++|+||+||++
T Consensus       133 lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l  211 (274)
T cd05076         133 LEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTL  211 (274)
T ss_pred             HHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHH
Confidence            5666779999999999987543       4899999998654332 234678889999999764 589999999999999


Q ss_pred             HHHh-hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        101 FELA-TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       101 ~~l~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++ .|..||....      ..+ ........                                          ...+.
T Consensus       212 ~el~~~g~~p~~~~~------~~~-~~~~~~~~------------------------------------------~~~~~  242 (274)
T cd05076         212 LEICFDGEVPLKERT------PSE-KERFYEKK------------------------------------------HRLPE  242 (274)
T ss_pred             HHHHhCCCCCccccC------hHH-HHHHHHhc------------------------------------------cCCCC
Confidence            9985 5888886422      111 11111100                                          00111


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .....+.+++.+||+.+|++|||+++++++
T Consensus       243 ~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         243 PSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            222356899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.84  E-value=1.4e-20  Score=151.62  Aligned_cols=135  Identities=13%  Similarity=0.145  Sum_probs=100.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|+|++++||++..++.+||+|||+++.....     .....++..|+|||.+.+..++.++|+||+||+++|+
T Consensus       255 LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~  334 (401)
T cd05107         255 LASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI  334 (401)
T ss_pred             HhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHH
Confidence            55566799999999999999999999999999865321     1233567789999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ..+.+...... +..+                                       ..+...+
T Consensus       335 l~~g~~P~~~~~------~~~~~~~~~~~-~~~~---------------------------------------~~p~~~~  368 (401)
T cd05107         335 FTLGGTPYPELP------MNEQFYNAIKR-GYRM---------------------------------------AKPAHAS  368 (401)
T ss_pred             HHcCCCCCCCCC------chHHHHHHHHc-CCCC---------------------------------------CCCCCCC
Confidence            98 788885432      22222222110 0000                                       0112334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+|+.+||+.+|.+||+++++++.
T Consensus       369 ~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         369 DEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            577899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=1.1e-20  Score=145.31  Aligned_cols=134  Identities=17%  Similarity=0.194  Sum_probs=98.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCC-----CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT-----EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|...++|+|+++.|+++..++.+||+|||.++.......     ...++..|+|||.+.+..++.++|+||+||++++
T Consensus       124 ~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~e  203 (279)
T cd05057         124 YLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWE  203 (279)
T ss_pred             HHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHH
Confidence            35666779999999999999999999999999986643211     1123457999999988889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..       ...+..........                                        ..+..+
T Consensus       204 l~~~g~~p~~~~~-------~~~~~~~~~~~~~~----------------------------------------~~~~~~  236 (279)
T cd05057         204 LMTFGAKPYEGIP-------AVEIPDLLEKGERL----------------------------------------PQPPIC  236 (279)
T ss_pred             HhcCCCCCCCCCC-------HHHHHHHHhCCCCC----------------------------------------CCCCCC
Confidence            998 999986432       22222221110000                                        012233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||..+|.+|||+.++++
T Consensus       237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         237 TIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            456789999999999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.84  E-value=9e-21  Score=145.08  Aligned_cols=84  Identities=14%  Similarity=0.179  Sum_probs=68.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcC-------CCCcchhhHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINA-------GYDCSADIWSV   96 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~-------~~~~~~Diws~   96 (214)
                      +|...++|+|+|+.|+++..++.++++|||.++.....     .....++..|+|||++.+.       .++.++|+||+
T Consensus       116 lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl  195 (269)
T cd05087         116 LHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSL  195 (269)
T ss_pred             HHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHH
Confidence            56667799999999999999999999999998755322     1223567789999998643       35789999999


Q ss_pred             HHHHHHHhh-CCCCCCC
Q psy16751         97 ACMAFELAT-GDYLFEP  112 (214)
Q Consensus        97 G~~l~~l~~-g~~~f~~  112 (214)
                      ||+++++++ |..||..
T Consensus       196 G~~l~el~~~g~~p~~~  212 (269)
T cd05087         196 GVTIWELFELGSQPYRH  212 (269)
T ss_pred             HHHHHHHHhCCCCCCCC
Confidence            999999996 9989864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.84  E-value=9.5e-21  Score=145.79  Aligned_cols=84  Identities=15%  Similarity=0.150  Sum_probs=70.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCC------CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFT------EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|....+|+|+++.||+++.++.++|+|||.+........      ...++..|++||.+.+..++.++|+||+|+++++
T Consensus       125 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~e  204 (284)
T cd05038         125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYE  204 (284)
T ss_pred             HHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhhe
Confidence            5666779999999999999999999999999987652211      1234456999999988889999999999999999


Q ss_pred             HhhCCCCCCC
Q psy16751        103 LATGDYLFEP  112 (214)
Q Consensus       103 l~~g~~~f~~  112 (214)
                      +++|..||..
T Consensus       205 l~tg~~p~~~  214 (284)
T cd05038         205 LFTYGDPSQS  214 (284)
T ss_pred             eeccCCCccc
Confidence            9999988753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0984|consensus

Probab=99.84  E-value=2.5e-21  Score=136.98  Aligned_cols=91  Identities=18%  Similarity=0.270  Sum_probs=77.7

Q ss_pred             ccccccccccccCCCcceEEeecCCceecc-CCCCC-CCcCCcccchHHHhcC----CCCcchhhHHHHHHHHHHhhCCC
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNACWVD-KHFTE-DVQTRQYRSLEVLINA----GYDCSADIWSVACMAFELATGDY  108 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~-~~~~~-~~~~~~y~aPE~~~~~----~~~~~~Diws~G~~l~~l~~g~~  108 (214)
                      +|||+||+|||++..|.||++|||++-... +-.++ ..|...|||||.+...    +|+-++||||+|++++|+.+++.
T Consensus       171 IHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~  250 (282)
T KOG0984|consen  171 IHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRF  250 (282)
T ss_pred             hhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccc
Confidence            899999999999999999999999998764 33333 5788899999999853    69999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHHH
Q psy16751        109 LFEPHAGDTYTRDEDHLAHIIE  130 (214)
Q Consensus       109 ~f~~~~~~~~~~~~~~~~~~~~  130 (214)
                      |+..+..     +.+|+.++.+
T Consensus       251 PY~~w~t-----pF~qLkqvVe  267 (282)
T KOG0984|consen  251 PYESWGT-----PFQQLKQVVE  267 (282)
T ss_pred             cccccCC-----HHHHHHHHhc
Confidence            9986543     6777777654

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.83  E-value=9.6e-21  Score=144.86  Aligned_cols=134  Identities=10%  Similarity=0.176  Sum_probs=97.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCC---cCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDV---QTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~---~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      .+|....+|+|++++|++++.++.++++|||.+.......     ....   .+..|+|||.+.+..++.++|+||+||+
T Consensus       121 ~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~  200 (269)
T cd05065         121 YLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV  200 (269)
T ss_pred             HHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHH
Confidence            3566777999999999999999999999999987653211     1111   1346999999998889999999999999


Q ss_pred             HHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        100 AFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       100 l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++++++ |..||...+      .......+... ...                                        ..+
T Consensus       201 l~e~l~~g~~p~~~~~------~~~~~~~i~~~-~~~----------------------------------------~~~  233 (269)
T cd05065         201 MWEVMSYGERPYWDMS------NQDVINAIEQD-YRL----------------------------------------PPP  233 (269)
T ss_pred             HHHHhcCCCCCCCCCC------HHHHHHHHHcC-CcC----------------------------------------CCc
Confidence            999886 888886432      12222211110 000                                        011


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..++..+.+++.+||+.+|++||++.++++
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         234 MDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            233456789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0196|consensus

Probab=99.83  E-value=1.5e-21  Score=160.52  Aligned_cols=135  Identities=11%  Similarity=0.179  Sum_probs=108.0

Q ss_pred             HHhhhcccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcC--CcccchHHHhcCCCCcchhhHHH
Q psy16751         23 LYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQT--RQYRSLEVLINAGYDCSADIWSV   96 (214)
Q Consensus        23 ~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~--~~y~aPE~~~~~~~~~~~Diws~   96 (214)
                      -||.++.+    +|||+..+|||++.+-.+|++|||+++...+..    +...|.  ..|.|||.+.-+.++.++|+||+
T Consensus       745 kYLsdm~Y----VHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSy  820 (996)
T KOG0196|consen  745 KYLSDMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSY  820 (996)
T ss_pred             HHHhhcCc----hhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhcccc
Confidence            44555544    599999999999999999999999999775432    222332  34999999999999999999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhc
Q psy16751         97 ACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY  175 (214)
Q Consensus        97 G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (214)
                      |+++||+++ |..|+..+.      +.+.+..+.+-..-|                                        
T Consensus       821 GIVmWEVmSyGERPYWdmS------NQdVIkaIe~gyRLP----------------------------------------  854 (996)
T KOG0196|consen  821 GIVMWEVMSYGERPYWDMS------NQDVIKAIEQGYRLP----------------------------------------  854 (996)
T ss_pred             ceEEEEecccCCCcccccc------hHHHHHHHHhccCCC----------------------------------------
Confidence            999999876 888887555      567776665543322                                        


Q ss_pred             CCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       176 ~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                       .|.+|+..+.+||..||++|...||++.|++.
T Consensus       855 -pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  855 -PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             -CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence             34778889999999999999999999999874

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.83  E-value=1.9e-20  Score=143.33  Aligned_cols=137  Identities=18%  Similarity=0.236  Sum_probs=94.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHhc-------CCCCcchhhHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLIN-------AGYDCSADIWSV   96 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~~-------~~~~~~~Diws~   96 (214)
                      +|...++|+|++++||+++.++.++|+|||++.....     ......++..|+|||++.+       ..++.++||||+
T Consensus       115 lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl  194 (268)
T cd05086         115 MHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWAL  194 (268)
T ss_pred             HHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHH
Confidence            5666779999999999999999999999999864321     1223467888999999853       235778999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhc
Q psy16751         97 ACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY  175 (214)
Q Consensus        97 G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (214)
                      ||+++++++ +..||...+      +.+.+.++...-..  .           ...        +               
T Consensus       195 G~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~--~-----------~~~--------~---------------  232 (268)
T cd05086         195 GVTLWELFENAAQPYSHLS------DREVLNHVIKDQQV--K-----------LFK--------P---------------  232 (268)
T ss_pred             HHHHHHHHhCCCCCCCCCC------HHHHHHHHHhhccc--c-----------cCC--------C---------------
Confidence            999999987 456775322      23333333221000  0           000        0               


Q ss_pred             CCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       176 ~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ......+..+.+++..|+ .+|++|||++++++
T Consensus       233 ~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         233 QLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             ccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            011223446678999999 68999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG2052|consensus

Probab=99.83  E-value=9.6e-21  Score=147.17  Aligned_cols=168  Identities=17%  Similarity=0.184  Sum_probs=114.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH-hhhccccccc----------ccccccccccccCCCcceEEeecCCceeccC------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY-IRNACWVDKH----------FTEDVQTRQYRSLPPFLFDIGTYRNACWVDK------   65 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~-~~~~~~~~~~----------~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~------   65 (214)
                      +|||||....--++..+|.... ...+.|.|..          .|||+|+.||++.+++.+-|+|+|+|-...+      
T Consensus       295 SL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~id  374 (513)
T KOG2052|consen  295 SLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTID  374 (513)
T ss_pred             cHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCccc
Confidence            7899998855556666665433 3334454433          5999999999999999999999999987643      


Q ss_pred             -CCCCCCcCCcccchHHHhcC-C---CC--cchhhHHHHHHHHHHhhC----------CCCCCCCC-CCCCCCcHHHHHH
Q psy16751         66 -HFTEDVQTRQYRSLEVLINA-G---YD--CSADIWSVACMAFELATG----------DYLFEPHA-GDTYTRDEDHLAH  127 (214)
Q Consensus        66 -~~~~~~~~~~y~aPE~~~~~-~---~~--~~~Diws~G~~l~~l~~g----------~~~f~~~~-~~~~~~~~~~~~~  127 (214)
                       .....+||..|||||++... +   +.  ..+||||||.++||++.+          ++||.... .++...++.....
T Consensus       375 i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVC  454 (513)
T KOG2052|consen  375 IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVC  454 (513)
T ss_pred             CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhccee
Confidence             35567999999999999754 1   22  479999999999999864          35665432 2222222222222


Q ss_pred             HHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHh
Q psy16751        128 IIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       128 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      +.+.-..+|..|                                     ...+....+..+|+.||..||.-|.||-.+.
T Consensus       455 v~~~RP~ipnrW-------------------------------------~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  455 VQKLRPNIPNRW-------------------------------------KSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             ecccCCCCCccc-------------------------------------ccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            222222222222                                     1234456778999999999999999986553

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.82  E-value=2.3e-20  Score=143.17  Aligned_cols=136  Identities=14%  Similarity=0.215  Sum_probs=99.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.+.++|+|++|.|+++...+.++++|||.+......    .....++..|+|||.+.+..++.++||||+|++++++
T Consensus       132 ~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  211 (275)
T cd05046         132 HLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEV  211 (275)
T ss_pred             HhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHH
Confidence            366677799999999999999999999999998754321    2233556679999999888888999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      ....+..+..  +...                                      +..+...+
T Consensus       212 ~~~~~~p~~~~~------~~~~~~~~~~--~~~~--------------------------------------~~~~~~~~  245 (275)
T cd05046         212 FTQGELPFYGLS------DEEVLNRLQA--GKLE--------------------------------------LPVPEGCP  245 (275)
T ss_pred             HhCCCCCccccc------hHHHHHHHHc--CCcC--------------------------------------CCCCCCCC
Confidence            98 777885322      1111111100  0000                                      00112344


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||+.+|++|||+.++++.
T Consensus       246 ~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         246 SRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            577899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG1151|consensus

Probab=99.82  E-value=7.2e-21  Score=148.46  Aligned_cols=166  Identities=15%  Similarity=0.223  Sum_probs=114.2

Q ss_pred             hhhhccCchhhhhHHHHHHhh---hccccc----ccccccccccccccCC---CcceEEeecCCceeccCC---------
Q psy16751          6 NFFVAFGSLEETDKKRRLYIR---NACWVD----KHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH---------   66 (214)
Q Consensus         6 ~~~~~~~~~~~~d~k~~~~~~---~~~~~~----~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~---------   66 (214)
                      |||++..+++..-..+.|.++   .+.+.+    .++|-|+||.|||+..   -|.+||.|||++++++..         
T Consensus       556 DFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGme  635 (775)
T KOG1151|consen  556 DFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGME  635 (775)
T ss_pred             hHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccccee
Confidence            455555555544433433322   222333    2389999999999754   489999999999998643         


Q ss_pred             -CCCCCcCCcccchHHHhcC----CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhh
Q psy16751         67 -FTEDVQTRQYRSLEVLINA----GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQ  141 (214)
Q Consensus        67 -~~~~~~~~~y~aPE~~~~~----~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  141 (214)
                       .+...||.||.+||.+.-.    ..+.++||||+||++|+.+.|+-||...         ..-..|++.--.+.     
T Consensus       636 LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn---------qsQQdILqeNTIlk-----  701 (775)
T KOG1151|consen  636 LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN---------QSQQDILQENTILK-----  701 (775)
T ss_pred             eecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc---------hhHHHHHhhhchhc-----
Confidence             2345899999999998744    3788999999999999999999999632         11222222100000     


Q ss_pred             ccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        142 SGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                       ...                           -.++..+..+.++.+||++||.+.-+.|..+.++-.||||.
T Consensus       702 -AtE---------------------------VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  702 -ATE---------------------------VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             -cee---------------------------ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence             000                           01112244566788999999999999999999999999984

>KOG0590|consensus

Probab=99.81  E-value=9.9e-21  Score=157.93  Aligned_cols=173  Identities=16%  Similarity=0.227  Sum_probs=121.9

Q ss_pred             cchhhhhccCchhhhhHHH--HHHhh--hcccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCC
Q psy16751          3 SIFNFFVAFGSLEETDKKR--RLYIR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~--~~~~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~   71 (214)
                      |||+.++....+.-.++-.  +..+.  +.+|...+.|||+|++|+++..+|.+||+|||.+..+.-.       ....+
T Consensus       406 Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~  485 (601)
T KOG0590|consen  406 DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIV  485 (601)
T ss_pred             HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcc
Confidence            6788888765554444422  22232  2366666689999999999999999999999999877432       23458


Q ss_pred             cCCcccchHHHhcCCCCc-chhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         72 QTRQYRSLEVLINAGYDC-SADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        72 ~~~~y~aPE~~~~~~~~~-~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      |+..|.|||++-+..|++ ..||||.|++++.|.+|+.||.......     .+...+             .        
T Consensus       486 gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~-----~~~~~~-------------~--------  539 (601)
T KOG0590|consen  486 GSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSD-----NSFKTN-------------N--------  539 (601)
T ss_pred             cCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccc-----cchhhh-------------c--------
Confidence            999999999999999985 8999999999999999999986432111     000000             0        


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                         ..          ................+...+.+|.+||++||.+|.|+++|++.+||+.
T Consensus       540 ---~~----------~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~  590 (601)
T KOG0590|consen  540 ---YS----------DQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS  590 (601)
T ss_pred             ---cc----------cccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence               00          0000000011112344566789999999999999999999999999974

>KOG1094|consensus

Probab=99.81  E-value=3.7e-20  Score=148.36  Aligned_cols=143  Identities=13%  Similarity=0.225  Sum_probs=105.3

Q ss_pred             HHHhhhcccccccccccccccccccCCCcceEEeecCCceeccCCCCCC-----CcCCcccchHHHhcCCCCcchhhHHH
Q psy16751         22 RLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTED-----VQTRQYRSLEVLINAGYDCSADIWSV   96 (214)
Q Consensus        22 ~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~Diws~   96 (214)
                      .-|++.+.+    +|||+.++|||++.++.+||+|||+++....-.+..     +-+..|||+|.++-..+++++|+|++
T Consensus       650 maYLes~nf----VHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWaf  725 (807)
T KOG1094|consen  650 MAYLESLNF----VHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAF  725 (807)
T ss_pred             HHHHHhhch----hhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhh
Confidence            345555554    599999999999999999999999999775433332     34567999999999999999999999


Q ss_pred             HHHHHHHhh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         97 ACMAFELAT--GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        97 G~~l~~l~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+++||+++  ...||....      +.+...+....+..++...         +                         
T Consensus       726 gvTlwE~~~~C~e~Py~~lt------~e~vven~~~~~~~~~~~~---------~-------------------------  765 (807)
T KOG1094|consen  726 GVTLWEVFMLCREQPYSQLT------DEQVVENAGEFFRDQGRQV---------V-------------------------  765 (807)
T ss_pred             HHHHHHHHHHHhhCchhhhh------HHHHHHhhhhhcCCCCcce---------e-------------------------
Confidence            999999865  677886433      2233333333222222111         0                         


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ...|..++..+.++|.+||..+.++|||++++..
T Consensus       766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            1245677788889999999999999999999853

>KOG0200|consensus

Probab=99.81  E-value=8.9e-20  Score=153.57  Aligned_cols=134  Identities=16%  Similarity=0.276  Sum_probs=98.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-CCC---CCcCC--cccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTE---DVQTR--QYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~---~~~~~--~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +....++|||+..+||++..+..+||+|||+|+..... .+.   ..++.  .|||||.+....|+.++||||+||+++|
T Consensus       434 L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~E  513 (609)
T KOG0200|consen  434 LASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWE  513 (609)
T ss_pred             HhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHH
Confidence            44445699999999999999999999999999965432 221   22223  3999999999889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..|+.+...     ..+.+. .++           .+.+                             ...|..+
T Consensus       514 ifsLG~~PYp~~~~-----~~~l~~-~l~-----------~G~r-----------------------------~~~P~~c  547 (609)
T KOG0200|consen  514 IFTLGGTPYPGIPP-----TEELLE-FLK-----------EGNR-----------------------------MEQPEHC  547 (609)
T ss_pred             HhhCCCCCCCCCCc-----HHHHHH-HHh-----------cCCC-----------------------------CCCCCCC
Confidence            988 7788864220     111111 111           1100                             1134566


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..++.++|+.||+.+|++||++.++..
T Consensus       548 ~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  548 SDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            778889999999999999999988753

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.80  E-value=1e-19  Score=155.03  Aligned_cols=126  Identities=22%  Similarity=0.290  Sum_probs=91.5

Q ss_pred             ccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCC
Q psy16751         43 QYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT  117 (214)
Q Consensus        43 nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~  117 (214)
                      |+.....+.+++.|||.++....     .....+||+.|+|||++.+.+|+.++||||+||+++|+++|..||.+..   
T Consensus       508 ~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~---  584 (669)
T cd05610         508 NLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET---  584 (669)
T ss_pred             ceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---
Confidence            45556666778889998876532     2234589999999999999999999999999999999999999997533   


Q ss_pred             CCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCC
Q psy16751        118 YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDP  197 (214)
Q Consensus       118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp  197 (214)
                         ..+.+..++..  ..+                      .+.               ........+.+++.+||..||
T Consensus       585 ---~~~~~~~il~~--~~~----------------------~p~---------------~~~~~~~~~~~~l~~lL~~dP  622 (669)
T cd05610         585 ---PQQVFQNILNR--DIP----------------------WPE---------------GEEKLSVNAQNAIEILLTMDP  622 (669)
T ss_pred             ---HHHHHHHHHhc--CCC----------------------CCc---------------ccccCCHHHHHHHHHHcccCh
Confidence               22333222210  000                      000               001233456799999999999


Q ss_pred             CCCCCHHHHhcCCCCC
Q psy16751        198 KLRATAADCLQHPWLQ  213 (214)
Q Consensus       198 ~~R~t~~e~l~hp~f~  213 (214)
                      .+|||+.|+|+||||+
T Consensus       623 ~~R~ta~e~l~h~~~~  638 (669)
T cd05610         623 TKRAGLKELKQHPLFH  638 (669)
T ss_pred             hHCcCHHHHHhCHhhc
Confidence            9999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4250|consensus

Probab=99.79  E-value=4.4e-20  Score=150.62  Aligned_cols=89  Identities=21%  Similarity=0.307  Sum_probs=77.1

Q ss_pred             hhcccccccccccccccccccCCC----cceEEeecCCceecc--CCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHH
Q psy16751         26 RNACWVDKHFTEDVQTRQYRSLPP----FLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVAC   98 (214)
Q Consensus        26 ~~~~~~~~~~h~d~k~~nil~~~~----~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~   98 (214)
                      -+.++.++++|||+||.||++...    ...||+|||.|+..+  +...+.+||+.|.+||+... ..|+..+|.||+||
T Consensus       133 l~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gv  212 (732)
T KOG4250|consen  133 LRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGV  212 (732)
T ss_pred             HHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhh
Confidence            345778889999999999996442    367999999999885  45778899999999999995 67999999999999


Q ss_pred             HHHHHhhCCCCCCCCC
Q psy16751         99 MAFELATGDYLFEPHA  114 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~  114 (214)
                      ++|+.++|..||.+..
T Consensus       213 tlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  213 TLYECATGELPFIPFG  228 (732)
T ss_pred             HHHHHhccCCCCCcCC
Confidence            9999999999997654

>KOG0576|consensus

Probab=99.78  E-value=2.5e-19  Score=145.42  Aligned_cols=167  Identities=20%  Similarity=0.249  Sum_probs=122.8

Q ss_pred             cchhhhhccCchhhhhHHHH----HHhhhcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRR----LYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~----~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|.+++..++.+.+..+.-.    .+--+.+|..+.+|||+|..||++...|.+|++|||.+...+.   ..+..+||+.
T Consensus        98 slQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpy  177 (829)
T KOG0576|consen   98 SLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPY  177 (829)
T ss_pred             cccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCcc
Confidence            56778888888877776331    1122335666669999999999999999999999999987764   3556799999


Q ss_pred             ccchHHHhc---CCCCcchhhHHHHHHHHHHhhCCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         76 YRSLEVLIN---AGYDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        76 y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~g~~~-f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      |||||+..-   .+|+..+|||++|++..|+..-++| |.-+       .+..+..+.+ .|..|+....+         
T Consensus       178 wmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-------pmr~l~LmTk-S~~qpp~lkDk---------  240 (829)
T KOG0576|consen  178 WMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-------PMRALFLMTK-SGFQPPTLKDK---------  240 (829)
T ss_pred             ccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-------hHHHHHHhhc-cCCCCCcccCC---------
Confidence            999999873   3699999999999999999877765 4311       2444444332 23322222111         


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                                 ...++.+-+|++.+|..+|++|||++.+|+|||..
T Consensus       241 ---------------------------~kws~~fh~fvK~altknpKkRptaeklL~h~fvs  275 (829)
T KOG0576|consen  241 ---------------------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVS  275 (829)
T ss_pred             ---------------------------ccchHHHHHHHHHHhcCCCccCCChhhheeceeec
Confidence                                       22344667999999999999999999999999974

>KOG0199|consensus

Probab=99.77  E-value=1.1e-18  Score=142.54  Aligned_cols=129  Identities=16%  Similarity=0.191  Sum_probs=100.4

Q ss_pred             cccccccccccccccCCCcceEEeecCCceeccCCCCCC-Cc-----CCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTED-VQ-----TRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~-~~-----~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      ...+|||+..+|+++-....|||+|||+.+..+.....+ ++     ...|.|||.+....++.++|+|++||++|||++
T Consensus       231 krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFt  310 (1039)
T KOG0199|consen  231 KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFT  310 (1039)
T ss_pred             hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhc
Confidence            344799999999999999999999999999886432221 11     235999999999999999999999999999998


Q ss_pred             -CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        106 -GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       106 -g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                       |..||.+..+      .+.+.++- . |                                       .+...+..|+.+
T Consensus       311 yGEePW~G~~g------~qIL~~iD-~-~---------------------------------------erLpRPk~csed  343 (1039)
T KOG0199|consen  311 YGEEPWVGCRG------IQILKNID-A-G---------------------------------------ERLPRPKYCSED  343 (1039)
T ss_pred             cCCCCCCCCCH------HHHHHhcc-c-c---------------------------------------ccCCCCCCChHH
Confidence             7789987652      33333321 0 0                                       012245778889


Q ss_pred             HHHHHHHccccCCCCCCCHHHHh
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      ..++|.+||..+|.+|||+..+.
T Consensus       344 IY~imk~cWah~paDRptFsair  366 (1039)
T KOG0199|consen  344 IYQIMKNCWAHNPADRPTFSAIR  366 (1039)
T ss_pred             HHHHHHHhccCCccccccHHHHH
Confidence            99999999999999999988764

>KOG3653|consensus

Probab=99.76  E-value=6.4e-19  Score=138.00  Aligned_cols=99  Identities=15%  Similarity=0.158  Sum_probs=75.1

Q ss_pred             chhhhhHHHHHHhhhcc-----cccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHH
Q psy16751         13 SLEETDKKRRLYIRNAC-----WVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVL   82 (214)
Q Consensus        13 ~~~~~d~k~~~~~~~~~-----~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~   82 (214)
                      ++.+.......|||.-.     |--.+.|||+|++|+|+.+++++-|+|||+|..+.-     .....+||..|||||++
T Consensus       311 ria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvL  390 (534)
T KOG3653|consen  311 RIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVL  390 (534)
T ss_pred             HHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHH
Confidence            34455554444444332     222347999999999999999999999999998842     22336999999999999


Q ss_pred             hcC-CCC-----cchhhHHHHHHHHHHhhCCCCCC
Q psy16751         83 INA-GYD-----CSADIWSVACMAFELATGDYLFE  111 (214)
Q Consensus        83 ~~~-~~~-----~~~Diws~G~~l~~l~~g~~~f~  111 (214)
                      .|. ++.     ...||||+|.++||++++-..+.
T Consensus       391 Egainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~  425 (534)
T KOG3653|consen  391 EGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD  425 (534)
T ss_pred             hhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            987 343     47999999999999999865553

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.75  E-value=6.2e-18  Score=150.20  Aligned_cols=144  Identities=13%  Similarity=0.071  Sum_probs=93.4

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCC
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP  112 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~  112 (214)
                      .++|+|+|+.||+++..+..++. +|.+...... ....+++.|+|||++.+..++.++||||+||+++|+++|+.||..
T Consensus       803 ~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        803 AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             CeecCCCCHHhEEECCCCceEEE-eccccccccC-CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence            66999999999999988877765 5554433222 233788999999999988899999999999999999999999853


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHc
Q psy16751        113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM  192 (214)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  192 (214)
                      ..+..  ..   +....+..-..        .....+.+        +...         .....+.....++.+++.+|
T Consensus       881 ~~~~~--~~---~~~~~~~~~~~--------~~~~~~~~--------~~~~---------~~~~~~~~~~~~~~~l~~~C  930 (968)
T PLN00113        881 EFGVH--GS---IVEWARYCYSD--------CHLDMWID--------PSIR---------GDVSVNQNEIVEVMNLALHC  930 (968)
T ss_pred             ccCCC--Cc---HHHHHHHhcCc--------cchhheeC--------cccc---------CCCCccHHHHHHHHHHHHhh
Confidence            22110  11   11111110000        00000000        0000         00011233445678999999


Q ss_pred             cccCCCCCCCHHHHhc
Q psy16751        193 LAYDPKLRATAADCLQ  208 (214)
Q Consensus       193 l~~dp~~R~t~~e~l~  208 (214)
                      |+.||++|||++|+++
T Consensus       931 l~~~P~~RPt~~evl~  946 (968)
T PLN00113        931 TATDPTARPCANDVLK  946 (968)
T ss_pred             CcCCchhCcCHHHHHH
Confidence            9999999999999986

>KOG1024|consensus

Probab=99.72  E-value=2.2e-17  Score=127.12  Aligned_cols=133  Identities=15%  Similarity=0.156  Sum_probs=100.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCC-----CCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTE-----DVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|.|+..+|++++..-.|||+|=.+++..-..-+.     .-.+.-||+||.+....|+.++|+|||||++||+
T Consensus       412 lh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWEL  491 (563)
T KOG1024|consen  412 LHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWEL  491 (563)
T ss_pred             HHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHH
Confidence            56667799999999999999999999999999876321111     1234469999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |+.|+..-+      ..+... +           +.++.+                             ...|-+|+
T Consensus       492 mtlg~~PyaeID------PfEm~~-y-----------lkdGyR-----------------------------laQP~NCP  524 (563)
T KOG1024|consen  492 MTLGKLPYAEID------PFEMEH-Y-----------LKDGYR-----------------------------LAQPFNCP  524 (563)
T ss_pred             HhcCCCCccccC------HHHHHH-H-----------Hhccce-----------------------------ecCCCCCc
Confidence            88 888875322      111111 1           111111                             11346778


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++..+|.-||...|++||+.+|+.+
T Consensus       525 DeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  525 DELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            88999999999999999999999864

>KOG0606|consensus

Probab=99.71  E-value=8.2e-18  Score=142.84  Aligned_cols=140  Identities=16%  Similarity=0.190  Sum_probs=109.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC------------------CCCCCCcCCcccchHHHhcCCCCcc
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK------------------HFTEDVQTRQYRSLEVLINAGYDCS   90 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~   90 (214)
                      +|.-.++|+|+|+.|.++..-|.+|+.|||++.....                  ..+..+||+.|+|||+++..+|+..
T Consensus       159 lh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkp  238 (1205)
T KOG0606|consen  159 LHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKP  238 (1205)
T ss_pred             hccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCC
Confidence            4444568999999999999999999999999876521                  1234589999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhH
Q psy16751         91 ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV  170 (214)
Q Consensus        91 ~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (214)
                      +|.|++|+++++++-|..||++++      ..+.+...+.....-++.                                
T Consensus       239 vdwwamGiIlyeFLVgcvpffGdt------peelfg~visd~i~wpE~--------------------------------  280 (1205)
T KOG0606|consen  239 VDWWAMGIILYEFLVGCVPFFGDT------PEELFGQVISDDIEWPEE--------------------------------  280 (1205)
T ss_pred             ccHHHHHHHHHHHheeeeeccCCC------HHHHHhhhhhhhcccccc--------------------------------
Confidence            999999999999999999999765      344444443322221111                                


Q ss_pred             HHhhcCCChhhHHHHHHHHHHccccCCCCCC---CHHHHhcCCCCC
Q psy16751        171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRA---TAADCLQHPWLQ  213 (214)
Q Consensus       171 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---t~~e~l~hp~f~  213 (214)
                             +....+++.+++..+|+.+|..|.   .+-++.+|+||+
T Consensus       281 -------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~  319 (1205)
T KOG0606|consen  281 -------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQ  319 (1205)
T ss_pred             -------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhcccee
Confidence                   123345778999999999999996   367888999997

>KOG1025|consensus

Probab=99.67  E-value=2.8e-16  Score=130.71  Aligned_cols=130  Identities=15%  Similarity=0.221  Sum_probs=99.7

Q ss_pred             ccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcC--CcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         31 VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQT--RQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        31 ~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~--~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+..+|||+..+|+|+.....+||.|||+|+.....   +....|.  +-|+|-|.+....|++++||||+||++||+++
T Consensus       816 ~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmT  895 (1177)
T KOG1025|consen  816 EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMT  895 (1177)
T ss_pred             hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHh
Confidence            455689999999999999999999999999877533   2222332  34999999999999999999999999999988


Q ss_pred             -CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        106 -GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       106 -g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                       |..|+.+..       .+-+...++.-.                                        +...|+.++.+
T Consensus       896 FGa~Py~gi~-------~~eI~dlle~ge----------------------------------------RLsqPpiCtiD  928 (1177)
T KOG1025|consen  896 FGAKPYDGIP-------AEEIPDLLEKGE----------------------------------------RLSQPPICTID  928 (1177)
T ss_pred             cCCCccCCCC-------HHHhhHHHhccc----------------------------------------cCCCCCCccHH
Confidence             777876433       233333322111                                        12245778888


Q ss_pred             HHHHHHHccccCCCCCCCHHHHh
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      +.-+|.+||..|+..||+++++-
T Consensus       929 Vy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  929 VYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             HHHHHHHHhccCcccCccHHHHH
Confidence            88999999999999999998764

>KOG0603|consensus

Probab=99.65  E-value=1.5e-16  Score=128.92  Aligned_cols=155  Identities=21%  Similarity=0.212  Sum_probs=118.5

Q ss_pred             hhhhhccCchhhhhHHHHHHh----hhcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchH
Q psy16751          5 FNFFVAFGSLEETDKKRRLYI----RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLE   80 (214)
Q Consensus         5 ~~~~~~~~~~~~~d~k~~~~~----~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE   80 (214)
                      |.=+.+.......|.+..++-    -..+|...++++|+|..||+++..|.+++.|||+++..-+.... +||..|||||
T Consensus        85 ft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-cgt~eymApE  163 (612)
T KOG0603|consen   85 FTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-CGTYEYRAPE  163 (612)
T ss_pred             hhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-ccchhhhhhH
Confidence            333344444566666543331    12355555689999999999999999999999999877544333 9999999999


Q ss_pred             HHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCC
Q psy16751         81 VLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP  160 (214)
Q Consensus        81 ~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (214)
                      ++.  +...++|.||+|++.+++++|..+|.+          +....|.+.                             
T Consensus       164 I~~--gh~~a~D~ws~gvl~felltg~~pf~~----------~~~~~Il~~-----------------------------  202 (612)
T KOG0603|consen  164 IIN--GHLSAADWWSFGVLAFELLTGTLPFGG----------DTMKRILKA-----------------------------  202 (612)
T ss_pred             hhh--ccCCcccchhhhhhHHHHhhCCCCCch----------HHHHHHhhh-----------------------------
Confidence            998  578899999999999999999999963          444444432                             


Q ss_pred             CCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        161 GLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                   ...++...+..+.++++.++..+|..|..     +.|+++|+||+.
T Consensus       203 -------------~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~  248 (612)
T KOG0603|consen  203 -------------ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS  248 (612)
T ss_pred             -------------ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence                         22355667778889999999999999985     578999999863

>KOG1033|consensus

Probab=99.64  E-value=1.8e-16  Score=126.16  Aligned_cols=130  Identities=22%  Similarity=0.291  Sum_probs=97.0

Q ss_pred             cccccccccccccccCCCcceEEeecCCceeccCC---------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      ...+|+|++|.||....+..+||+|||+.......         .+..+||+.||+||.+.+..|+.++||||+|++++|
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~E  454 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAE  454 (516)
T ss_pred             ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHH
Confidence            45579999999999999999999999998766432         345699999999999999999999999999999999


Q ss_pred             HhhC-CCCCCCCCCCCCCCcHHHHHHHHHH-hCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        103 LATG-DYLFEPHAGDTYTRDEDHLAHIIEL-LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       103 l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++.- ...|            +....+..+ -|.+|+.++..                                      
T Consensus       455 L~~~f~T~~------------er~~t~~d~r~g~ip~~~~~d--------------------------------------  484 (516)
T KOG1033|consen  455 LLIQFSTQF------------ERIATLTDIRDGIIPPEFLQD--------------------------------------  484 (516)
T ss_pred             HHHHhccHH------------HHHHhhhhhhcCCCChHHhhc--------------------------------------
Confidence            9972 2222            222222211 13333332211                                      


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                       .+.-..|++.||.+.|.+||++.+.-.|+|.
T Consensus       485 -~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  485 -YPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             -CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence             1122589999999999999988887777775

>KOG1152|consensus

Probab=99.62  E-value=2.2e-16  Score=126.79  Aligned_cols=109  Identities=16%  Similarity=0.240  Sum_probs=92.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceec-cCCCCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV-DKHFTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~~~y~   77 (214)
                      |||+|+=-+..+.+...|.+++  ...  .||...++|||+|-+|+.++.+|-+||+|||.|.-. ..+....+||..|.
T Consensus       656 DLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~a  735 (772)
T KOG1152|consen  656 DLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYA  735 (772)
T ss_pred             chhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeecccc
Confidence            6888888888888888876433  222  277777899999999999999999999999998755 45677789999999


Q ss_pred             chHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCC
Q psy16751         78 SLEVLINAGY-DCSADIWSVACMAFELATGDYLFE  111 (214)
Q Consensus        78 aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~  111 (214)
                      |||++-|.+| +.+.|||++|+++|-+.....||+
T Consensus       736 apevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  736 APEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             chhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            9999999886 578999999999999999988886

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.62  E-value=1.5e-15  Score=111.02  Aligned_cols=104  Identities=22%  Similarity=0.339  Sum_probs=89.6

Q ss_pred             cccccccccccccccccccCC-CcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~  102 (214)
                      .+|....+|+|+++.|+++.. .+.++|+|||.+......   .....+...|++||..... .++.+.|+|++|+++++
T Consensus       107 ~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~  186 (215)
T cd00180         107 YLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYE  186 (215)
T ss_pred             HHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHH
Confidence            456667799999999999998 899999999999877554   3445678889999999887 78889999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +                                                                               
T Consensus       187 l-------------------------------------------------------------------------------  187 (215)
T cd00180         187 L-------------------------------------------------------------------------------  187 (215)
T ss_pred             H-------------------------------------------------------------------------------
Confidence            9                                                                               


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHP  210 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp  210 (214)
                      ..+.+++.+|++.||++||++.++++|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            0235899999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.54  E-value=5.6e-15  Score=112.27  Aligned_cols=87  Identities=11%  Similarity=0.121  Sum_probs=65.0

Q ss_pred             hhcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC--------CCCcchhhHHHH
Q psy16751         26 RNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA--------GYDCSADIWSVA   97 (214)
Q Consensus        26 ~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~Diws~G   97 (214)
                      -..+|...++|.|++++|++++++|.+.|+||+.....++.......+..|.+||.....        .++.+.|.|++|
T Consensus       158 vA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG  237 (288)
T PF14531_consen  158 VANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG  237 (288)
T ss_dssp             HHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH
T ss_pred             HHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHH
Confidence            334677778999999999999999999999999988777654434555789999988653        478899999999


Q ss_pred             HHHHHHhhCCCCCCC
Q psy16751         98 CMAFELATGDYLFEP  112 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~  112 (214)
                      +++|.++++..||..
T Consensus       238 ~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  238 ITLYSLWCGRLPFGL  252 (288)
T ss_dssp             HHHHHHHHSS-STCC
T ss_pred             HHHHHHHHccCCCCC
Confidence            999999999999974

>KOG1240|consensus

Probab=99.51  E-value=2.3e-14  Score=122.80  Aligned_cols=135  Identities=20%  Similarity=0.236  Sum_probs=95.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc----CC--CC----CCCcCCcccchHHHhcC----------C-
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD----KH--FT----EDVQTRQYRSLEVLINA----------G-   86 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~----~~--~~----~~~~~~~y~aPE~~~~~----------~-   86 (214)
                      -||-.++.|+|+|.+|||+..-..+.|+||..-+..-    .+  +.    +...-.+|.|||.+...          + 
T Consensus       135 qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~  214 (1431)
T KOG1240|consen  135 QCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPL  214 (1431)
T ss_pred             HHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccc
Confidence            3888888999999999999999999999998764331    11  11    11222369999999752          2 


Q ss_pred             CCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCC
Q psy16751         87 YDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPW  165 (214)
Q Consensus        87 ~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (214)
                      .+++.||||+||+++|+++ |+++|.          .-|+....+.-.-.++..+.                        
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~----------LSQL~aYr~~~~~~~e~~Le------------------------  260 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFT----------LSQLLAYRSGNADDPEQLLE------------------------  260 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCccc----------HHHHHhHhccCccCHHHHHH------------------------
Confidence            5678999999999999988 788883          44444332211011111111                        


Q ss_pred             chhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        166 DLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                                   .-.+..++.|+..|++.||++|.+|++.|+.
T Consensus       261 -------------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  261 -------------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             -------------hCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence                         1122356899999999999999999999975

>KOG1345|consensus

Probab=99.51  E-value=4.3e-15  Score=109.68  Aligned_cols=86  Identities=13%  Similarity=0.148  Sum_probs=71.7

Q ss_pred             cccccccccccccccccccCC--CcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~l  100 (214)
                      ..|+.+++|||+|.+|||+-.  -..||++|||.++..+..-...-.+..|-+||++...     ..++..|+|.||+++
T Consensus       136 fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~  215 (378)
T KOG1345|consen  136 FMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIF  215 (378)
T ss_pred             HhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeee
Confidence            477788899999999999744  3589999999999888766655666779999998743     357899999999999


Q ss_pred             HHHhhCCCCCCCC
Q psy16751        101 FELATGDYLFEPH  113 (214)
Q Consensus       101 ~~l~~g~~~f~~~  113 (214)
                      +.+++|.+||...
T Consensus       216 f~cltG~~PWQka  228 (378)
T KOG1345|consen  216 FYCLTGKFPWQKA  228 (378)
T ss_pred             eeeecCCCcchhh
Confidence            9999999999743

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.44  E-value=4.3e-13  Score=99.44  Aligned_cols=85  Identities=21%  Similarity=0.239  Sum_probs=72.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHH-hcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVL-INAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~-~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+..+|+|+++.|++++.++.++|+|||.+.......    ....++..|++||.+ ....++.++|+|++|+++++
T Consensus       113 ~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~  192 (225)
T smart00221      113 YLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYE  192 (225)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHH
Confidence            3555667899999999999999999999999998775443    445778889999999 55568889999999999999


Q ss_pred             HhhCCCCCCC
Q psy16751        103 LATGDYLFEP  112 (214)
Q Consensus       103 l~~g~~~f~~  112 (214)
                      +++|+.||..
T Consensus       193 l~~g~~pf~~  202 (225)
T smart00221      193 LLWGPEPFSG  202 (225)
T ss_pred             HHHCCCCccc
Confidence            9999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.40  E-value=2.3e-12  Score=100.22  Aligned_cols=148  Identities=24%  Similarity=0.240  Sum_probs=103.4

Q ss_pred             cccccccccccccccccccCCCc-ceEEeecCCceeccCC---------CCCCCcCCcccchHHHhc---CCCCcchhhH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDKH---------FTEDVQTRQYRSLEVLIN---AGYDCSADIW   94 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~~---------~~~~~~~~~y~aPE~~~~---~~~~~~~Diw   94 (214)
                      .+|....+|||+||.|+++...+ .++++|||.++.....         ....+|+..|++||.+.+   ..++...|+|
T Consensus       116 ~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~  195 (384)
T COG0515         116 YLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIW  195 (384)
T ss_pred             HHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHH
Confidence            46666678999999999999988 7999999999866432         356689999999999998   5688899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCC--ChHHhhccCCccccccccCccccCCCCCCCchhhHHH
Q psy16751         95 SVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDI--PKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV  172 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (214)
                      |+|+++++++.|..||......   .............+..  ....                       ...       
T Consensus       196 s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~-------  242 (384)
T COG0515         196 SLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTPSLASPL-----------------------SPS-------  242 (384)
T ss_pred             HHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCccccccc-----------------------Ccc-------
Confidence            9999999999999887643311   0122222222221111  0000                       000       


Q ss_pred             hhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       173 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                          ........+.+++.+++..+|..|.+..+...+++.
T Consensus       243 ----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~  278 (384)
T COG0515         243 ----NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL  278 (384)
T ss_pred             ----ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHh
Confidence                001122456799999999999999999887776543

>KOG4158|consensus

Probab=99.36  E-value=1.4e-12  Score=101.40  Aligned_cols=138  Identities=11%  Similarity=0.081  Sum_probs=94.5

Q ss_pred             hhhc--ccccccccccccccccccC--CC--cceEEeecCCceeccC---------CCCCCCcCCcccchHHHhcCC---
Q psy16751         25 IRNA--CWVDKHFTEDVQTRQYRSL--PP--FLFDIGTYRNACWVDK---------HFTEDVQTRQYRSLEVLINAG---   86 (214)
Q Consensus        25 ~~~~--~~~~~~~h~d~k~~nil~~--~~--~~~kl~Dfg~a~~~~~---------~~~~~~~~~~y~aPE~~~~~~---   86 (214)
                      ++.+  +|-|.+-|||+|+.||++.  .+  -.+.|+|||++--.+.         ..-...|+-.-||||+....+   
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~  430 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN  430 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence            4444  5556668999999999963  23  4678999999754432         222346777899999998542   


Q ss_pred             --CC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCC
Q psy16751         87 --YD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLK  163 (214)
Q Consensus        87 --~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (214)
                        .+ .++|.|+.|.+.||++....||++..........      .+                                 
T Consensus       431 avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~------Yq---------------------------------  471 (598)
T KOG4158|consen  431 AVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT------YQ---------------------------------  471 (598)
T ss_pred             eeeccchhhhhhhhhhHHHHhccCCcccccchheechhh------hh---------------------------------
Confidence              22 3899999999999999999999863311100000      00                                 


Q ss_pred             CCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH---HHHhc
Q psy16751        164 PWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA---ADCLQ  208 (214)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~---~e~l~  208 (214)
                             +.+-..+++.+++.+++++..+|+.||++|+++   ..+|+
T Consensus       472 -------e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  472 -------ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             -------hhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence                   001112456777888999999999999999984   45554

>KOG1023|consensus

Probab=99.15  E-value=8.5e-11  Score=95.23  Aligned_cols=148  Identities=11%  Similarity=0.119  Sum_probs=96.2

Q ss_pred             HHHHHhhhcccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHhcC---C----C
Q psy16751         20 KRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLINA---G----Y   87 (214)
Q Consensus        20 k~~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~~~---~----~   87 (214)
                      +...|+++.-.   .+|..+++.|++++..-.+|+.|||+......     ......-...|.|||.+.+.   .    .
T Consensus        59 ~Gl~ylh~s~i---~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~  135 (484)
T KOG1023|consen   59 KGLAYLHNSPI---GYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESAL  135 (484)
T ss_pred             HHHHHHhcCcc---eeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccc
Confidence            33445554332   17999999999999999999999999876642     11122334569999999874   1    3


Q ss_pred             CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCch
Q psy16751         88 DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL  167 (214)
Q Consensus        88 ~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (214)
                      +.+.|+||+|++++|++.+..||........  ..+.+..+.. .+..+.                         .+.-.
T Consensus       136 ~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~--~~eii~~~~~-~~~~~~-------------------------rP~i~  187 (484)
T KOG1023|consen  136 TQKGDIYSFGIIMYEILFRSGPFDLRNLVED--PDEIILRVKK-GGSNPF-------------------------RPSIE  187 (484)
T ss_pred             cccCCeehHHHHHHHHHhccCccccccccCC--hHHHHHHHHh-cCCCCc-------------------------Ccchh
Confidence            5679999999999999999999975332111  1222222221 111100                         00000


Q ss_pred             hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHh
Q psy16751        168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                               ......+.+..++..||.-+|.+||+++++-
T Consensus       188 ---------~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  188 ---------LLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             ---------hhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence                     0012233568999999999999999988763

>KOG0195|consensus

Probab=99.12  E-value=1.8e-10  Score=85.73  Aligned_cols=156  Identities=17%  Similarity=0.184  Sum_probs=95.1

Q ss_pred             CccchhhhhccCchhhhhHHHHHH----hhhccccccc---c-cccccccccccCCCcceEE--eecCCceeccCCCCCC
Q psy16751          1 FKSIFNFFVAFGSLEETDKKRRLY----IRNACWVDKH---F-TEDVQTRQYRSLPPFLFDI--GTYRNACWVDKHFTED   70 (214)
Q Consensus         1 ~~~l~~~~~~~~~~~~~d~k~~~~----~~~~~~~~~~---~-h~d~k~~nil~~~~~~~kl--~Dfg~a~~~~~~~~~~   70 (214)
                      |-+|||+|+....++-..-....|    ...+.+.|+.   + .-.+.+..+.++++-+.+|  +|-..+.  +  ....
T Consensus       271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--q--e~gr  346 (448)
T KOG0195|consen  271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--Q--EVGR  346 (448)
T ss_pred             chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee--e--cccc
Confidence            457888888877754222222212    1122222222   1 1134556666766655554  3433332  1  1223


Q ss_pred             CcCCcccchHHHhcCCCC---cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc
Q psy16751         71 VQTRQYRSLEVLINAGYD---CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS  147 (214)
Q Consensus        71 ~~~~~y~aPE~~~~~~~~---~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  147 (214)
                      .-+|.|++||.+...+-+   .++|+|||.++++|+.++..||....      .++.--++.- -|-             
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls------pmecgmkial-egl-------------  406 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS------PMECGMKIAL-EGL-------------  406 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC------chhhhhhhhh-ccc-------------
Confidence            557889999999987533   58999999999999999999997544      3332222210 000             


Q ss_pred             ccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHH
Q psy16751        148 EFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC  206 (214)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~  206 (214)
                                                +...|+..+..+..|+.-|++-||-+||.++.+
T Consensus       407 --------------------------rv~ippgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  407 --------------------------RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             --------------------------cccCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence                                      011345566777899999999999999998765

>KOG0590|consensus

Probab=99.04  E-value=6.5e-11  Score=99.54  Aligned_cols=140  Identities=15%  Similarity=0.158  Sum_probs=100.7

Q ss_pred             ccccccccccccccccCCCc-ceEEeecCCceeccC------CCCCCCc-CCcccchHHHhcCC-CCcchhhHHHHHHHH
Q psy16751         31 VDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDK------HFTEDVQ-TRQYRSLEVLINAG-YDCSADIWSVACMAF  101 (214)
Q Consensus        31 ~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~------~~~~~~~-~~~y~aPE~~~~~~-~~~~~Diws~G~~l~  101 (214)
                      ...+.|+|++|+|.+++.++ .++++|||+|.....      .....+| ++.|.|||...+.. .....|+||.|+++.
T Consensus       142 ~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~  221 (601)
T KOG0590|consen  142 ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLS  221 (601)
T ss_pred             ccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccc
Confidence            44567999999999999999 999999999987754      1334578 99999999999965 457899999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      .+++|..++.-.....               +.           ...+....    ....             .......
T Consensus       222 ~~~~g~~p~~~~~~~~---------------~~-----------~~~~~~~~----~~~~-------------~~~~~~~  258 (601)
T KOG0590|consen  222 AMLTGELPWDFPSRKD---------------GR-----------YSSWKSNK----GRFT-------------QLPWNSI  258 (601)
T ss_pred             ccccCCCCcccccccc---------------cc-----------ceeecccc----cccc-------------cCccccC
Confidence            9999998875322100               00           00000000    0000             0111233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .....+++.+++..+|+.|.+.+++..+||+.
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~  290 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLS  290 (601)
T ss_pred             ChhhhhcccccccCCchhcccccccccccccc
Confidence            34557999999999999999999999999985

>KOG1165|consensus

Probab=99.01  E-value=6.3e-10  Score=84.88  Aligned_cols=88  Identities=10%  Similarity=0.071  Sum_probs=75.2

Q ss_pred             cccccccccccccccccccCCC-----cceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPP-----FLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSAD   92 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~-----~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~D   92 (214)
                      .+|.+..+.||+||.|.|+.+.     ..+.++|||+|+...++          .+...||..||+=..-+|...+..-|
T Consensus       139 ~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDD  218 (449)
T KOG1165|consen  139 YVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDD  218 (449)
T ss_pred             HHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhh
Confidence            3677777999999999999774     47899999999877432          34568999999999999998899999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCCC
Q psy16751         93 IWSVACMAFELATGDYLFEPHAG  115 (214)
Q Consensus        93 iws~G~~l~~l~~g~~~f~~~~~  115 (214)
                      +=|+|=++++++.|..||.+-..
T Consensus       219 LEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  219 LEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             HHHhhhhhhhhccCCCccccccC
Confidence            99999999999999999986643

>KOG0606|consensus

Probab=98.84  E-value=2.7e-09  Score=92.11  Aligned_cols=142  Identities=19%  Similarity=0.259  Sum_probs=101.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC----------------------------------CCCCCCcC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----------------------------------HFTEDVQT   73 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----------------------------------~~~~~~~~   73 (214)
                      -++.....|+|.++.|.+....+..++.|||.....+-                                  .....+||
T Consensus       919 ~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t  998 (1205)
T KOG0606|consen  919 SLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGT  998 (1205)
T ss_pred             ccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCC
Confidence            45554457999999999999999999999984333210                                  01223789


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|.+||..++......+|.|++|+++++.++|.++|....      .......+..   ..                  
T Consensus       999 ~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t------pq~~f~ni~~---~~------------------ 1051 (1205)
T KOG0606|consen  999 PDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET------PQQIFENILN---RD------------------ 1051 (1205)
T ss_pred             CcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc------hhhhhhcccc---CC------------------
Confidence            99999999999999999999999999999999999996433      1111111110   00                  


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHH---HHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA---DCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~---e~l~hp~f~~  214 (214)
                               .++.         .-+...+....+++.+.|..+|.+|.++.   ++-.||||+.
T Consensus      1052 ---------~~~p---------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~ 1097 (1205)
T KOG0606|consen 1052 ---------IPWP---------EGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQD 1097 (1205)
T ss_pred             ---------CCCC---------CCccccChhhhhhhhhhhccCchhccCcccccccccCCccCC
Confidence                     0000         01223345667999999999999999877   8899999974

>KOG1164|consensus

Probab=98.83  E-value=6.2e-09  Score=81.89  Aligned_cols=86  Identities=15%  Similarity=0.074  Sum_probs=69.8

Q ss_pred             ccccccccccccccccccCCC-----cceEEeecCCce--ec----cC---C----CCCCCcCCcccchHHHhcCCCCcc
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPP-----FLFDIGTYRNAC--WV----DK---H----FTEDVQTRQYRSLEVLINAGYDCS   90 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~-----~~~kl~Dfg~a~--~~----~~---~----~~~~~~~~~y~aPE~~~~~~~~~~   90 (214)
                      +|....+|||+||.|+.+...     ..+.++|||+|+  ..    +.   +    .....||..|.++....+...+..
T Consensus       138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~  217 (322)
T KOG1164|consen  138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRR  217 (322)
T ss_pred             HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCc
Confidence            555566899999999998764     469999999999  32    11   1    112359999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhCCCCCCCCC
Q psy16751         91 ADIWSVACMAFELATGDYLFEPHA  114 (214)
Q Consensus        91 ~Diws~G~~l~~l~~g~~~f~~~~  114 (214)
                      -|+||++-++.++..|..|+.+..
T Consensus       218 DDles~~Y~l~el~~g~LPW~~~~  241 (322)
T KOG1164|consen  218 DDLESLFYMLLELLKGSLPWEALE  241 (322)
T ss_pred             hhhhhHHHHHHHHhcCCCCCcccc
Confidence            999999999999999998886543

>KOG1163|consensus

Probab=98.80  E-value=4.6e-09  Score=76.98  Aligned_cols=87  Identities=10%  Similarity=0.030  Sum_probs=70.2

Q ss_pred             cccccccccccccccccccCC---CcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchhhH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSADIW   94 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Diw   94 (214)
                      .+|.+..+|||+||.|.|..-   ...+.++|||+|+...+.          .+...||..|.+=....|...+..-|+=
T Consensus       126 yvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDme  205 (341)
T KOG1163|consen  126 YVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDME  205 (341)
T ss_pred             HHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhh
Confidence            355555679999999999643   357899999999987432          2344788889888888877778899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCC
Q psy16751         95 SVACMAFELATGDYLFEPHA  114 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f~~~~  114 (214)
                      |+|-++.++-.|..||.+-.
T Consensus       206 SvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  206 SVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             hhcceeeeeecCCCcccccc
Confidence            99999999999999998654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.70  E-value=2.2e-09  Score=79.58  Aligned_cols=67  Identities=6%  Similarity=-0.014  Sum_probs=51.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.++.+|+|++|+|+++.++| ++|+|||.+....+...         .....+...|+.++|+||+|+++..+.
T Consensus       150 ~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        150 SLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             HHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhh---------HHHHHHHhHhcccccccceeEeehHHH
Confidence            47888889999999999999888 99999998764432211         111444556888999999999877654

>KOG1166|consensus

Probab=98.63  E-value=3.2e-08  Score=86.23  Aligned_cols=80  Identities=10%  Similarity=0.120  Sum_probs=68.8

Q ss_pred             ccccccccccccccccccCC-------CcceEEeecCCceecc-----CCCCCCCcCCcccchHHHhcCCCCcchhhHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-------PFLFDIGTYRNACWVD-----KHFTEDVQTRQYRSLEVLINAGYDCSADIWSV   96 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-------~~~~kl~Dfg~a~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~   96 (214)
                      +|-..++|.|+||.|.++..       ...++|||||.|..+.     ...+..++|-.+-++|...|.+|++.+|.|.+
T Consensus       810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGl  889 (974)
T KOG1166|consen  810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGL  889 (974)
T ss_pred             HHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHH
Confidence            67777799999999988654       3588999999998773     34556688889999999999999999999999


Q ss_pred             HHHHHHHhhCCC
Q psy16751         97 ACMAFELATGDY  108 (214)
Q Consensus        97 G~~l~~l~~g~~  108 (214)
                      +.+++-|+.|+.
T Consensus       890 Aa~~h~mLFG~y  901 (974)
T KOG1166|consen  890 AATVHVMLFGKY  901 (974)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999863

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.63  E-value=4.5e-08  Score=71.44  Aligned_cols=87  Identities=5%  Similarity=-0.145  Sum_probs=65.3

Q ss_pred             cccccccccccc-cccccccCCCcceEEeecCCceeccCCCC----------------CCCcCCcccchHHHhcC-CCCc
Q psy16751         28 ACWVDKHFTEDV-QTRQYRSLPPFLFDIGTYRNACWVDKHFT----------------EDVQTRQYRSLEVLINA-GYDC   89 (214)
Q Consensus        28 ~~~~~~~~h~d~-k~~nil~~~~~~~kl~Dfg~a~~~~~~~~----------------~~~~~~~y~aPE~~~~~-~~~~   89 (214)
                      .+|.++++|+|+ |+.||+++.++.++|+|||+|........                -...++.|++|+...-. ..+-
T Consensus       106 ~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~  185 (218)
T PRK12274        106 QLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSW  185 (218)
T ss_pred             HHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchh
Confidence            377888899999 79999999999999999999986543221                01357788888766544 3453


Q ss_pred             -chhhHHHHHHHHHHhhCCCCCCCCC
Q psy16751         90 -SADIWSVACMAFELATGDYLFEPHA  114 (214)
Q Consensus        90 -~~Diws~G~~l~~l~~g~~~f~~~~  114 (214)
                       ..+..+.|+.++.++++..+..+++
T Consensus       186 ~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        186 IRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHhcchHHHHHhccCCccccC
Confidence             4455599999999999988776544

>KOG2137|consensus

Probab=98.62  E-value=1e-08  Score=85.15  Aligned_cols=136  Identities=13%  Similarity=0.197  Sum_probs=97.4

Q ss_pred             ccccccccccccCCCcceEEeecCCceeccCC----CCC------C--CcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTE------D--VQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~------~--~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+.|++|.+..++..||+.|+.+......    +..      .  .-...|.|||++.+..-+.++|++|+||.++-
T Consensus       122 VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~  201 (700)
T KOG2137|consen  122 VHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYT  201 (700)
T ss_pred             eecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEE
Confidence            89999999999999999999999987655431    110      0  22346999999999778889999999999999


Q ss_pred             Hh-hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LA-TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +. .|+..+...+...       ........+..                                     .......+.
T Consensus       202 i~~~gk~i~~a~~~~~-------~~~~~~~~~~~-------------------------------------~~~~~s~~~  237 (700)
T KOG2137|consen  202 IYNGGKSIIAANGGLL-------SYSFSRNLLNA-------------------------------------GAFGYSNNL  237 (700)
T ss_pred             EecCCcchhhccCCcc-------hhhhhhccccc-------------------------------------ccccccccC
Confidence            98 5666665332100       00001000000                                     001123556


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.++++=|.++|..++..||++.+++..|||.+
T Consensus       238 p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D  270 (700)
T KOG2137|consen  238 PSELRESLKKLLNGDSAVRPTLDLLLSIPFFSD  270 (700)
T ss_pred             cHHHHHHHHHHhcCCcccCcchhhhhcccccCC
Confidence            678889999999999999999999999999974

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.56  E-value=3.2e-08  Score=85.14  Aligned_cols=71  Identities=6%  Similarity=-0.121  Sum_probs=56.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcCC-CCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~   99 (214)
                      +|...++|+|+||+||++..++.+||+|||+++....   .....++|+.|.+||...... -.-..++|++|.-
T Consensus       120 LH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         120 LHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             HHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcccccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            6667789999999999999999999999999986642   234568899999999876553 3346778888843

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.49  E-value=4.7e-08  Score=77.63  Aligned_cols=57  Identities=7%  Similarity=-0.018  Sum_probs=45.1

Q ss_pred             ccccccccccc-cccccccCCCcceEEeecCCceeccCCC-----------CCCCcCCcccchHHHhcC
Q psy16751         29 CWVDKHFTEDV-QTRQYRSLPPFLFDIGTYRNACWVDKHF-----------TEDVQTRQYRSLEVLINA   85 (214)
Q Consensus        29 ~~~~~~~h~d~-k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~~~y~aPE~~~~~   85 (214)
                      +|...++|+|+ ||.||+++.++.++|+|||+|+......           ....++..|+|||.+...
T Consensus       127 lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        127 LHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             HHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            67777899999 9999999888999999999999764321           233567778888888643

>KOG0601|consensus

Probab=98.45  E-value=4.9e-07  Score=74.01  Aligned_cols=139  Identities=15%  Similarity=0.132  Sum_probs=98.0

Q ss_pred             hcccccccccccccccccccCCC-cceEEeecCCceeccCC--------CCCCCcCCcccchHHHhcCCCCcchhhHHHH
Q psy16751         27 NACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVDKH--------FTEDVQTRQYRSLEVLINAGYDCSADIWSVA   97 (214)
Q Consensus        27 ~~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G   97 (214)
                      ..+|+..++|.++++.||....+ ..++++|||+.......        .+...|...|++||+..+. ++...|++|+|
T Consensus       236 ~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~  314 (524)
T KOG0601|consen  236 SHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLG  314 (524)
T ss_pred             cccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchh
Confidence            35677778999999999999888 89999999999887532        1223567789999999764 67889999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      .++.+..++..+........    ..++.+.     ..+.++                                      
T Consensus       315 ev~l~~~l~~~~~~~g~~~~----W~~~r~~-----~ip~e~--------------------------------------  347 (524)
T KOG0601|consen  315 EVILEAILGSHLPSVGKNSS----WSQLRQG-----YIPLEF--------------------------------------  347 (524)
T ss_pred             hhhHhhHhhcccccCCCCCC----ccccccc-----cCchhh--------------------------------------
Confidence            99999998876654321000    0000000     011110                                      


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ....+.++...+..|+..+|..|+++..++.|++.+
T Consensus       348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             hcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence            111223444588899999999999999999998764

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.96  E-value=6.2e-05  Score=60.24  Aligned_cols=85  Identities=12%  Similarity=0.052  Sum_probs=65.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceec--cCCCCCCCcCCcccchHHHh-----cCCCCcchhhHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV--DKHFTEDVQTRQYRSLEVLI-----NAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~--~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Diws~G~~l~  101 (214)
                      +|.+.++-.|++++|+++..++.|.+.|-..-..-  +......+|..+|.+||.-.     +..-+...|.|.+||+++
T Consensus       133 lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF  212 (637)
T COG4248         133 LHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIF  212 (637)
T ss_pred             HHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHH
Confidence            56666667899999999999999999874332211  23344568999999999986     224556899999999999


Q ss_pred             HHhhC-CCCCCCC
Q psy16751        102 ELATG-DYLFEPH  113 (214)
Q Consensus       102 ~l~~g-~~~f~~~  113 (214)
                      +++.| ..||.+-
T Consensus       213 ~lL~ggrHPysGI  225 (637)
T COG4248         213 HLLFGGRHPYSGI  225 (637)
T ss_pred             HHHhcCCCCCCcc
Confidence            99986 7888753

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.94  E-value=7.3e-06  Score=59.56  Aligned_cols=34  Identities=9%  Similarity=-0.184  Sum_probs=29.1

Q ss_pred             cccccccccccccccccCCCcceEEeecCCceecc
Q psy16751         30 WVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD   64 (214)
Q Consensus        30 ~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~   64 (214)
                      |...++|+|+||.||+++ ++.++|+|||+|....
T Consensus       135 H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~  168 (190)
T cd05147         135 QDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             HhCCcccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence            566789999999999998 5789999999996543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1266|consensus

Probab=97.90  E-value=1.4e-05  Score=61.63  Aligned_cols=128  Identities=16%  Similarity=0.092  Sum_probs=81.0

Q ss_pred             ccccccccccccCCCcceEEeecCCceec-----c--CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCC
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNACWV-----D--KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~~~-----~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|..+....|.+..+|.+|++--.-...-     .  .......+.++|.+||.-...+-+.++||+++|....++..+.
T Consensus       200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE  279 (458)
T ss_pred             ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence            78888889999999999988642221111     0  1122235567889998877667788999999999988988775


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .--....  .-....+.++.....                                                -....-++
T Consensus       280 iq~tnse--S~~~~ee~ia~~i~~------------------------------------------------len~lqr~  309 (458)
T KOG1266|consen  280 IQSTNSE--SKVEVEENIANVIIG------------------------------------------------LENGLQRG  309 (458)
T ss_pred             eccCCCc--ceeehhhhhhhheee------------------------------------------------ccCccccC
Confidence            3221111  000011111111000                                                00001147


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ++.+||+..|..||+|.+++.||..
T Consensus       310 ~i~kcl~~eP~~rp~ar~llfHpll  334 (458)
T KOG1266|consen  310 SITKCLEGEPNGRPDARLLLFHPLL  334 (458)
T ss_pred             cCcccccCCCCCCcchhhhhcCcee
Confidence            9999999999999999999999953

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.79  E-value=1e-05  Score=58.81  Aligned_cols=36  Identities=11%  Similarity=-0.135  Sum_probs=30.7

Q ss_pred             ccc-cccccccccccccccCCCcceEEeecCCceeccC
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      +|. .+++|+|++|.||++. ++.++|+|||+|.....
T Consensus       133 lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         133 LYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             HHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence            455 6789999999999998 89999999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0601|consensus

Probab=97.60  E-value=4.4e-05  Score=62.83  Aligned_cols=143  Identities=19%  Similarity=0.084  Sum_probs=91.0

Q ss_pred             hhhhhHHHHHHhhhcccccccccccccccccccCCC-cceEEeecCCceeccCCCCCCCcCCccc--chHHHhcCCCCcc
Q psy16751         14 LEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVDKHFTEDVQTRQYR--SLEVLINAGYDCS   90 (214)
Q Consensus        14 ~~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~   90 (214)
                      +++..++.    .+.+|....+|.|+++.||++..+ +..+++|||.+..+.-......+.-.+.  ++.......+..+
T Consensus       371 ~~~q~~~~----l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~  446 (524)
T KOG0601|consen  371 LTAQILTA----LNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSK  446 (524)
T ss_pred             hHHHHHhc----cccccchhhhcccccccceeeccchhhhhccccccccccceecccccccccccccchhhccccccccc
Confidence            34444444    555666666899999999999886 8889999999865322222222333344  4444444578889


Q ss_pred             hhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhH
Q psy16751         91 ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV  170 (214)
Q Consensus        91 ~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (214)
                      +|++|+|..+.+..++.++-....         +...+.+  |.                                    
T Consensus       447 ~~~~sl~~~~~e~~~~~~ls~~~~---------~~~~i~~--~~------------------------------------  479 (524)
T KOG0601|consen  447 ADIFSLGLSVDEAITGSPLSESGV---------QSLTIRS--GD------------------------------------  479 (524)
T ss_pred             cccccccccccccccCcccCcccc---------cceeeec--cc------------------------------------
Confidence            999999999999998876543211         0100000  00                                    


Q ss_pred             HHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       171 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                          ....+....++..+...|...++..|+.+.++..|.=
T Consensus       480 ----~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  480 ----TPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             ----ccCCCchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence                0011122245567888999999999999998887753

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.44  E-value=7.6e-05  Score=54.53  Aligned_cols=37  Identities=8%  Similarity=-0.073  Sum_probs=31.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      +|...++|+|++|.|++++.++.++|+|||.+...+.
T Consensus       141 lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         141 AYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             HHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            4556679999999999999999999999999865543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.39  E-value=8e-05  Score=56.14  Aligned_cols=35  Identities=9%  Similarity=-0.016  Sum_probs=31.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCcee
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACW   62 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~   62 (214)
                      .+|...++|+|++|.||++..++.++|+|||.+..
T Consensus       157 ~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        157 RFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            47777889999999999999889999999998853

>smart00090 RIO RIO-like kinase

Probab=97.23  E-value=0.00012  Score=55.08  Aligned_cols=36  Identities=8%  Similarity=-0.078  Sum_probs=31.3

Q ss_pred             ccccc-cccccccccccccCCCcceEEeecCCceeccC
Q psy16751         29 CWVDK-HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~~~-~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      +|.++ ++|+|++|.||+++ ++.++|+|||.|...+.
T Consensus       164 LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      164 LYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             HHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence            77777 89999999999998 88999999999865544

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.03  E-value=0.00031  Score=50.65  Aligned_cols=36  Identities=11%  Similarity=-0.109  Sum_probs=30.3

Q ss_pred             ccc-cccccccccccccccCCCcceEEeecCCceeccC
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      +|. ..++|+|++|.|+++. ++.++++|||.+.....
T Consensus       130 lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         130 LYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             HhhccCcCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence            444 6679999999999999 89999999999965543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10345 hypothetical protein; Provisional

Probab=96.87  E-value=0.00044  Score=51.05  Aligned_cols=34  Identities=3%  Similarity=-0.089  Sum_probs=27.2

Q ss_pred             hcccccccccccccccccccCCC----cceEEeecCCc
Q psy16751         27 NACWVDKHFTEDVQTRQYRSLPP----FLFDIGTYRNA   60 (214)
Q Consensus        27 ~~~~~~~~~h~d~k~~nil~~~~----~~~kl~Dfg~a   60 (214)
                      ..+|.+.++|+|+||.||++...    ..++|+|++.+
T Consensus       119 ~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        119 RYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            35788888999999999999743    48999994443

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.82  E-value=0.0005  Score=58.06  Aligned_cols=34  Identities=6%  Similarity=-0.059  Sum_probs=29.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceec
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV   63 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~   63 (214)
                      +|...++|+|++|.||++ .++.++|+|||+++..
T Consensus       444 lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        444 LHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             HHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            566677999999999999 6789999999998653

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=96.76  E-value=0.0015  Score=47.54  Aligned_cols=34  Identities=6%  Similarity=-0.127  Sum_probs=29.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceec
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV   63 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~   63 (214)
                      +|....+|+|+++.|+++. ++.++++|||.+...
T Consensus       106 lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724       106 LHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            5666778999999999998 899999999998653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.49  E-value=0.0013  Score=48.39  Aligned_cols=33  Identities=9%  Similarity=-0.124  Sum_probs=28.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCcee
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACW   62 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~   62 (214)
                      +|...++|+|++|.|+++. ++.++++|||.+..
T Consensus       111 lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        111 LHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            5666779999999999998 78999999999864

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.46  E-value=0.0017  Score=53.42  Aligned_cols=37  Identities=11%  Similarity=-0.008  Sum_probs=32.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      +|.++.+|+|++|.|+++..++.++++|||++...+.
T Consensus       273 l~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       273 VLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            5667789999999999999999999999999976653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1093|consensus

Probab=96.37  E-value=0.0032  Score=52.14  Aligned_cols=89  Identities=13%  Similarity=0.183  Sum_probs=59.6

Q ss_pred             CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCch
Q psy16751         88 DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL  167 (214)
Q Consensus        88 ~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (214)
                      ++++||||+|.++.++..|...+..-.      +.+++..+... +..+..........                     
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~------~s~~l~~i~k~-~~~d~~~~~~a~e~---------------------  160 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELT------ESEYLEILLKY-YTDDQELLSTAMEH---------------------  160 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHH------HHHHHHHHHHh-ccCchhHHHHHHHH---------------------
Confidence            359999999999999999987775332      45555555443 33222221111000                     


Q ss_pred             hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                              ...-.++..+.+++.+|+-..|..||...++++++-|
T Consensus       161 --------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~  197 (725)
T KOG1093|consen  161 --------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSF  197 (725)
T ss_pred             --------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccH
Confidence                    0113456677899999999999999999999888755

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.27  E-value=0.0025  Score=45.68  Aligned_cols=35  Identities=6%  Similarity=-0.162  Sum_probs=29.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceec
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV   63 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~   63 (214)
                      -+|.+.++|.|+.++|+.+.... +.++|||++..-
T Consensus       107 ~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642         107 KLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             HHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            37888889999999999988544 999999998633

>KOG1243|consensus

Probab=96.12  E-value=0.012  Score=49.83  Aligned_cols=88  Identities=13%  Similarity=0.121  Sum_probs=62.2

Q ss_pred             hhhhHHHHHHhhhcccccccccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcch
Q psy16751         15 EETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSA   91 (214)
Q Consensus        15 ~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~   91 (214)
                      +++-++..+||+|-++   .+|.++....+.++..|.-||++|-+++......   ........|..|+.+....+  ..
T Consensus       110 l~qIl~AL~FL~~d~~---lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~--s~  184 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCN---LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEW--SI  184 (690)
T ss_pred             HHHHHHHHHHHhccCC---eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcccc--ch
Confidence            3444555555654443   3799999999999999999999999887664332   22233334677776654333  48


Q ss_pred             hhHHHHHHHHHHhhCC
Q psy16751         92 DIWSVACMAFELATGD  107 (214)
Q Consensus        92 Diws~G~~l~~l~~g~  107 (214)
                      |.|.+||++++++.|.
T Consensus       185 D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  185 DSWGLGCLIEELFNGS  200 (690)
T ss_pred             hhhhHHHHHHHHhCcc
Confidence            9999999999999993

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=96.04  E-value=0.0037  Score=45.57  Aligned_cols=35  Identities=3%  Similarity=-0.316  Sum_probs=29.5

Q ss_pred             cccccccccccccccccCCCcceEEeecCCceeccC
Q psy16751         30 WVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        30 ~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      |...++|+|+++.||++. ++.+.|+|||.|-..+.
T Consensus       142 H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         142 KECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             HhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence            667789999999999996 57899999999865543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0576|consensus

Probab=95.68  E-value=0.0068  Score=51.37  Aligned_cols=77  Identities=14%  Similarity=0.012  Sum_probs=59.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      ++....+|+|    |++.. ++..+.+||+........  .+...+++.+++||+.....+....|.|+.|+-..++.-|
T Consensus       352 l~~~~~~~~d----~~l~s-~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~  426 (829)
T KOG0576|consen  352 LHSSYKVHRD----NILGS-EEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPG  426 (829)
T ss_pred             cccccccCcc----ccccc-ccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCC
Confidence            4443346666    44444 588999999998877655  5566899999999999999999999999999877777777


Q ss_pred             CCCC
Q psy16751        107 DYLF  110 (214)
Q Consensus       107 ~~~f  110 (214)
                      .+|-
T Consensus       427 ~pPr  430 (829)
T KOG0576|consen  427 LPPR  430 (829)
T ss_pred             CCCC
Confidence            6654

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.63  E-value=0.0058  Score=51.39  Aligned_cols=37  Identities=11%  Similarity=0.018  Sum_probs=32.0

Q ss_pred             ccccccccccccccccccCCCc----ceEEeecCCceeccC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPF----LFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~----~~kl~Dfg~a~~~~~   65 (214)
                      ++.++.+|+|++|.||++..++    .++++|||++...+.
T Consensus       276 if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            3467789999999999998887    999999999987743

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=95.61  E-value=0.0059  Score=41.72  Aligned_cols=29  Identities=10%  Similarity=-0.039  Sum_probs=26.4

Q ss_pred             ccccccccccccccCCCcceEEeecCCce
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      ..+|+|+++.|+++...+.++++|||.++
T Consensus       109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120         109 VLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             EEEecCCCcceEEEECCcEEEEEeccccc
Confidence            36899999999999988999999999885

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1826|consensus

Probab=95.31  E-value=0.0067  Score=56.46  Aligned_cols=76  Identities=9%  Similarity=0.081  Sum_probs=63.1

Q ss_pred             ccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      +|+++++-|-++..+..++++++|+.++..   ...+..++++.|+.|++...-.++.+.|+|..|+-++....|-.+|
T Consensus      1362 v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1362 VSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             hhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            799999999999999999999999998443   2345568888999999998888888899999998888877664443

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.20  E-value=0.011  Score=42.87  Aligned_cols=36  Identities=8%  Similarity=-0.162  Sum_probs=27.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD   64 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~   64 (214)
                      ++|...++|.|+...||++..+ .+.|+|||.+....
T Consensus       122 ~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  122 MLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             HHHhcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            4566778999999999999876 99999999986554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=94.99  E-value=0.012  Score=41.48  Aligned_cols=26  Identities=8%  Similarity=-0.102  Sum_probs=23.6

Q ss_pred             ccccccccccccCCCcceEEeecCCce
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      +|+|+++.|++++ ++.++++||+.+.
T Consensus       110 ~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151         110 CHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             ecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            8999999999998 6789999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3087|consensus

Probab=94.51  E-value=0.024  Score=40.84  Aligned_cols=35  Identities=6%  Similarity=-0.186  Sum_probs=28.6

Q ss_pred             ccccccccccccccccccCCCc---ceEEeecCCceec
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWV   63 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~   63 (214)
                      +|.+.++|.|+..+|+++.+++   .+.++|||++..-
T Consensus       129 lH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  129 LHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             hhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            7888889999999999976543   4579999998643

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=94.49  E-value=0.035  Score=40.82  Aligned_cols=35  Identities=9%  Similarity=-0.016  Sum_probs=30.7

Q ss_pred             cccccccccccccccccccCCCc---ceEEeecCCcee
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACW   62 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~   62 (214)
                      -+|...++|+|+++.||++...+   .+.++||+.++.
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            47888889999999999998877   899999998754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=93.17  E-value=0.047  Score=41.94  Aligned_cols=34  Identities=6%  Similarity=-0.088  Sum_probs=29.1

Q ss_pred             cccccccccccccccccccCC-------CcceEEeecCCce
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-------PFLFDIGTYRNAC   61 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-------~~~~kl~Dfg~a~   61 (214)
                      -+|.++++|+|+++.||++..       +..+.++||+.++
T Consensus       153 ~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        153 DMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            378888899999999999864       4689999999874

>KOG1035|consensus

Probab=92.48  E-value=0.21  Score=45.57  Aligned_cols=110  Identities=19%  Similarity=0.230  Sum_probs=71.7

Q ss_pred             CCCcceEEe--ecCCceeccCCCCC--CCcCCcccchHHHhcCCCCc--chhhHHHHHHHHHHhhCCCCCCCCCCCCCCC
Q psy16751         47 LPPFLFDIG--TYRNACWVDKHFTE--DVQTRQYRSLEVLINAGYDC--SADIWSVACMAFELATGDYLFEPHAGDTYTR  120 (214)
Q Consensus        47 ~~~~~~kl~--Dfg~a~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~--~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~  120 (214)
                      +..+.+.+.  ||+.+.........  ...+..+-++|......+..  ..|+|.+|.....+..|..+-.-        
T Consensus       323 ~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~--------  394 (1351)
T KOG1035|consen  323 DGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEK--------  394 (1351)
T ss_pred             CccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccc--------
Confidence            344566666  88887766544332  24455677888887665544  47999999999999887644210        


Q ss_pred             cHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCC
Q psy16751        121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLR  200 (214)
Q Consensus       121 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R  200 (214)
                       ...   ....+                                             +........+++.+|+.-++++|
T Consensus       395 -~~~---~~~~l---------------------------------------------~~~~~~~~~d~~~~~~~~~~~~R  425 (1351)
T KOG1035|consen  395 -SAV---PVSLL---------------------------------------------DVLSTSELLDALPKCLDEDSEER  425 (1351)
T ss_pred             -ccc---hhhhh---------------------------------------------ccccchhhhhhhhhhcchhhhhc
Confidence             000   00110                                             01111144689999999999999


Q ss_pred             CCHHHHhcCCCCC
Q psy16751        201 ATAADCLQHPWLQ  213 (214)
Q Consensus       201 ~t~~e~l~hp~f~  213 (214)
                      +++.+++.|+|.+
T Consensus       426 l~~~~ll~~~f~~  438 (1351)
T KOG1035|consen  426 LSALELLTHPFLR  438 (1351)
T ss_pred             cchhhhhhchhcc
Confidence            9999999999864

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=89.63  E-value=0.2  Score=36.77  Aligned_cols=28  Identities=14%  Similarity=0.101  Sum_probs=24.6

Q ss_pred             cccccccccccccCC--CcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLP--PFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~--~~~~kl~Dfg~a~   61 (214)
                      .+|+|+.+.|++++.  .+.+.|+||+.+.
T Consensus       176 l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         176 LVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             EEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            479999999999988  6778999999874

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK10271 thiK thiamine kinase; Provisional

Probab=88.78  E-value=0.26  Score=35.66  Aligned_cols=28  Identities=11%  Similarity=-0.051  Sum_probs=24.1

Q ss_pred             ccccccccccccCCCcceEEeecCCceec
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNACWV   63 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~~~   63 (214)
                      .|+|+.+.|++...++ ++++||+.|..-
T Consensus        80 ~H~D~~~~N~~~~~~~-~~lIDwe~a~~g  107 (188)
T PRK10271         80 LHMDVHAGNLVHSASG-LRLIDWEYAGDG  107 (188)
T ss_pred             ecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence            7999999999988776 889999998533

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=88.04  E-value=0.29  Score=36.41  Aligned_cols=33  Identities=6%  Similarity=-0.079  Sum_probs=27.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCce
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      -+|.++.+|.|..|.|+++.. +.++++|++..+
T Consensus       150 qlH~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~  182 (229)
T PF06176_consen  150 QLHKHGFYHGDPHPGNFLVSN-NGIRIIDTQGKR  182 (229)
T ss_pred             HHHHcCCccCCCCcCcEEEEC-CcEEEEECcccc
Confidence            367778899999999999884 559999998764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=87.35  E-value=0.36  Score=35.47  Aligned_cols=27  Identities=7%  Similarity=-0.081  Sum_probs=19.0

Q ss_pred             cccccccccccc-CCCcceEEeecCCce
Q psy16751         35 FTEDVQTRQYRS-LPPFLFDIGTYRNAC   61 (214)
Q Consensus        35 ~h~d~k~~nil~-~~~~~~kl~Dfg~a~   61 (214)
                      .|+|+.+.||++ ..++.++++||-.|.
T Consensus       146 cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  146 CHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             E-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             eeccCccccEEeccCCCeEEEecHHHHh
Confidence            599999999999 889999999998874

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG0592|consensus

Probab=87.19  E-value=0.15  Score=42.43  Aligned_cols=22  Identities=14%  Similarity=0.132  Sum_probs=18.9

Q ss_pred             hhccCchhhhhHHHHHHhhhcccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVDK   33 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~~   33 (214)
                      ++|..+|+|+|+||    +|+++-.+
T Consensus       189 ylH~~GIIHRDlKP----ENILLd~d  210 (604)
T KOG0592|consen  189 YLHSNGIIHRDLKP----ENILLDKD  210 (604)
T ss_pred             HHHhcCceeccCCh----hheeEcCC
Confidence            68999999999999    99986543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=85.95  E-value=0.47  Score=35.68  Aligned_cols=28  Identities=7%  Similarity=-0.210  Sum_probs=24.7

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|+|+.+.|+++++++.+.|+||+.|.
T Consensus       165 l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         165 VTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EECCCCCCccEEEeCCcEEEEEEccccc
Confidence            3799999999999988888999999773

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1006|consensus

Probab=85.94  E-value=0.18  Score=38.47  Aligned_cols=49  Identities=10%  Similarity=-0.035  Sum_probs=31.9

Q ss_pred             chhhhhccCchhhhhHHHHHHhhhcccccccccccccccccccCC---CcceEEeecCC
Q psy16751          4 IFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRN   59 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~   59 (214)
                      ..|||.+.-+++|+|+||    .|++.-   -|.++|-=..=+..   +..+|--|-|.
T Consensus       179 AL~yLK~~lkiIHRDvKP----SNILld---r~G~vKLCDFGIcGqLv~SiAkT~daGC  230 (361)
T KOG1006|consen  179 ALDYLKEELKIIHRDVKP----SNILLD---RHGDVKLCDFGICGQLVDSIAKTVDAGC  230 (361)
T ss_pred             HHHHHHHHhhhhhccCCh----hheEEe---cCCCEeeecccchHhHHHHHHhhhccCC
Confidence            468999999999999999    888753   26666633222221   23344455554

>PRK09902 hypothetical protein; Provisional

Probab=85.64  E-value=0.93  Score=33.57  Aligned_cols=34  Identities=3%  Similarity=-0.264  Sum_probs=28.4

Q ss_pred             ccccccccccccccccccCCCcc--eEEeecCCcee
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFL--FDIGTYRNACW   62 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~--~kl~Dfg~a~~   62 (214)
                      +|.....|+|+.+.||+++..+.  +.++||--++.
T Consensus       144 LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        144 MHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            67777899999999999976666  99999987653

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=85.30  E-value=0.53  Score=36.69  Aligned_cols=26  Identities=19%  Similarity=0.166  Sum_probs=23.6

Q ss_pred             ccccccccccccCCC----cceEEeecCCc
Q psy16751         35 FTEDVQTRQYRSLPP----FLFDIGTYRNA   60 (214)
Q Consensus        35 ~h~d~k~~nil~~~~----~~~kl~Dfg~a   60 (214)
                      .|+|+.+.|+++..+    +.+.++||..|
T Consensus       182 cH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         182 CHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             EecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            799999999999874    88999999887

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=84.20  E-value=0.75  Score=38.84  Aligned_cols=37  Identities=11%  Similarity=-0.031  Sum_probs=32.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK   65 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~   65 (214)
                      ++.++.+|.|.-|.|+++..+|.+-+.|||+....++
T Consensus       281 ~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         281 LLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            4447789999999999999999999999999877653

>KOG0615|consensus

Probab=84.18  E-value=0.24  Score=40.05  Aligned_cols=22  Identities=14%  Similarity=0.166  Sum_probs=19.3

Q ss_pred             hhccCchhhhhHHHHHHhhhcccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVDK   33 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~~   33 (214)
                      ++|.++|+|+|+||    +|++....
T Consensus       291 YLH~~GI~HRDiKP----eNILl~~~  312 (475)
T KOG0615|consen  291 YLHSQGIIHRDIKP----ENILLSND  312 (475)
T ss_pred             HHHHcCcccccCCc----ceEEeccC
Confidence            67899999999999    99987654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=83.71  E-value=0.58  Score=34.97  Aligned_cols=26  Identities=8%  Similarity=-0.219  Sum_probs=23.5

Q ss_pred             ccccccccccccCCCcceEEeecCCce
Q psy16751         35 FTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        35 ~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      +|.|+.+.|+++...+ +.|+||+.+.
T Consensus       156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       156 LHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             EecCCCCCcEEEcCCC-cEEEechhcC
Confidence            6999999999999877 9999999874

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0671|consensus

Probab=83.70  E-value=0.97  Score=36.24  Aligned_cols=58  Identities=10%  Similarity=0.075  Sum_probs=36.5

Q ss_pred             cchhhhhccCch----hhhhHHHHHHhhhc--ccccccccccccccccccCCCcceEEeecCCc
Q psy16751          3 SIFNFFVAFGSL----EETDKKRRLYIRNA--CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNA   60 (214)
Q Consensus         3 ~l~~~~~~~~~~----~~~d~k~~~~~~~~--~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a   60 (214)
                      ++|+++...+-+    .|...-....++.+  +|...++|.|+||+||+...+...+.-+-+..
T Consensus       176 S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  176 STFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             hHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence            456666554433    22222223344554  44455599999999999988888887776664

>TIGR02721 ycfN_thiK thiamine kinase

Probab=83.33  E-value=0.62  Score=35.36  Aligned_cols=27  Identities=15%  Similarity=0.146  Sum_probs=23.5

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      ..|+|+.+.|+++.+++ +.++||..|.
T Consensus       148 l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       148 PLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            37999999999998876 7899999874

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=83.24  E-value=0.67  Score=34.69  Aligned_cols=28  Identities=11%  Similarity=-0.003  Sum_probs=23.9

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|.|+.+.|++++..+..-|+||+.+.
T Consensus       166 l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         166 WFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             EEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            3799999999999877667799999873

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=83.12  E-value=0.79  Score=35.30  Aligned_cols=29  Identities=7%  Similarity=-0.137  Sum_probs=26.2

Q ss_pred             cccccccccccccCCCcceEEeecCCcee
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACW   62 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~   62 (214)
                      ..|.|+.+.|.+.+..+.++|+||-.|..
T Consensus       155 ~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         155 PCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             eecCCCCccceEEcCCCcEEEEecccCCC
Confidence            37999999999999999999999998853

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=83.12  E-value=0.71  Score=34.42  Aligned_cols=28  Identities=11%  Similarity=-0.047  Sum_probs=24.4

Q ss_pred             cccccccccccccCC-CcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLP-PFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~-~~~~kl~Dfg~a~   61 (214)
                      .+|+|+.+.|++... ++.+.++||-.|.
T Consensus       172 l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         172 FCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            479999999999987 5789999998773

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=82.75  E-value=0.67  Score=34.14  Aligned_cols=28  Identities=11%  Similarity=-0.014  Sum_probs=18.9

Q ss_pred             cccccccccccccC-CCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSL-PPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~-~~~~~kl~Dfg~a~   61 (214)
                      .+|.|+.+.|++++ .++.+-|+||+.+.
T Consensus       168 ~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  168 LIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             EE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             EEEeccccccceeeeccceeEEEecccce
Confidence            47999999999998 55666899998773

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0595|consensus

Probab=82.52  E-value=0.27  Score=39.55  Aligned_cols=22  Identities=18%  Similarity=0.184  Sum_probs=19.2

Q ss_pred             hhccCchhhhhHHHHHHhhhcccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVDK   33 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~~   33 (214)
                      +++.++|+|+|+||    +|++....
T Consensus       124 ~L~~~~IiHRDLKP----QNiLLs~~  145 (429)
T KOG0595|consen  124 FLHENNIIHRDLKP----QNILLSTT  145 (429)
T ss_pred             HHHHCCeeeccCCc----ceEEeccC
Confidence            57889999999999    99997764

>PRK05231 homoserine kinase; Provisional

Probab=82.43  E-value=0.74  Score=36.17  Aligned_cols=29  Identities=14%  Similarity=-0.007  Sum_probs=24.9

Q ss_pred             ccccccccccccccCCCcceEEeecCCce
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      ..+|+|..+.|++...+...-|+||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        188 GVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            45899999999999876666899999874

>KOG0581|consensus

Probab=81.01  E-value=0.42  Score=37.87  Aligned_cols=21  Identities=14%  Similarity=0.077  Sum_probs=18.0

Q ss_pred             hhhhccCchhhhhHHHHHHhhhccc
Q psy16751          6 NFFVAFGSLEETDKKRRLYIRNACW   30 (214)
Q Consensus         6 ~~~~~~~~~~~~d~k~~~~~~~~~~   30 (214)
                      .||.+..+|+|+|+||    .|++.
T Consensus       192 ~YLh~~~~IIHRDIKP----sNlLv  212 (364)
T KOG0581|consen  192 SYLHEERKIIHRDIKP----SNLLV  212 (364)
T ss_pred             HHHhhccCeeeccCCH----HHeee
Confidence            5777789999999999    88864

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=80.56  E-value=0.95  Score=35.43  Aligned_cols=29  Identities=10%  Similarity=-0.019  Sum_probs=25.4

Q ss_pred             ccccccccccccccCCCcceEEeecCCce
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      ..+|.|+.+.|+++..++.+.|+||+.+.
T Consensus       188 ~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       188 GVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             ccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            45899999999999888877899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		2e-64
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		2e-64
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		3e-61
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		2e-46
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		2e-46
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		9e-14
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-13
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-13
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		2e-13
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-13
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		3e-12
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		3e-12
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		3e-12
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		4e-12
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		4e-12
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		4e-12
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		9e-12
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-11
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		5e-11
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-09
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		4e-09
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		5e-09
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-09
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		5e-09
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-09
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		5e-09
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-09
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		5e-09
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-09
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-09
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		5e-09
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		5e-09
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-09
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-09
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		6e-09
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		7e-09
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		7e-09
4exu_A	371	Mapk13, Inactive Form Length = 371		8e-09
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		8e-09
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-08
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-08
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-08
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-08
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		8e-08
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-07
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-07
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-07
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-07
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-07
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-07
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-07
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-07
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-07
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-07
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-07
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-07
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-07
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-07
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-07
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-07
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-07
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-07
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-07
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-07
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		5e-07
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		6e-07
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		6e-07
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		6e-07
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		7e-07
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		7e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		9e-07
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-06
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-06
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-06
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-06
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-06
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-06
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-06
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-06
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-06
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-06
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-06
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-06
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-06
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-06
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-06
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-06
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-06
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-06
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-06
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-06
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-06
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-06
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-06
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		3e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-06
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		4e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		5e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		6e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		6e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		6e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		7e-06
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		7e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		8e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		8e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		8e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		9e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		9e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		9e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		9e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		9e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-05
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-05
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-05
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-05
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-05
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-05
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-05
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-05
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-05
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-05
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-05
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-05
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-05
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-05
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-05
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		2e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-05
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		6e-05
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		6e-05
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		6e-05
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		6e-05
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		6e-05
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		6e-05
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		6e-05
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		6e-05
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		6e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		2e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-04
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		4e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		5e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-04
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		5e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		5e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		5e-04

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 131/161 (81%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEPH
Sbjct: 221 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 280
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLVE
Sbjct: 281 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 340
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct: 341 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 381

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 131/161 (81%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRSLEVLI +GY+  ADIWS ACMAFELATGDYLFEPH
Sbjct: 237 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ YTRDEDH+A IIELLG +P+++I +G  S EFFTKKG+L+HI  LKPW L+ VLVE
Sbjct: 297 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 356
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W+ E A GF++FL PML   P+ RATAA+CL+HPWL +
Sbjct: 357 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  231 bits (588), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 107/161 (66%), Positives = 124/161 (77%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACWV KHFTED+QTRQYRS+EVLI AGY   ADIWS ACMAFELATGDYLFEPH
Sbjct: 229 IADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPH 288
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
           +G+ Y+RDEDH+AHIIELLG IP+    SG  S EFF ++GELRHI  LKPW L+ VLVE
Sbjct: 289 SGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVE 348
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY W  E A  F++FL PML   P+ RA+A +CL+HPWL +
Sbjct: 349 KYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 389

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 112/161 (69%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACW D+H+T  +QTR+YRS EVL+ A + C ADIWS AC+ FEL TGD+LFEP 
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
            G +YT+D+DH+A IIELLG++P  ++++G  +  FF  +G LR+I  LK W L  VL E
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 298
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY ++ + A+  S+FL PML  DP+ RA A   + HPWL++
Sbjct: 299 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  181 bits (460), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 112/161 (69%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I    NACW D+H+T  +QTR+YRS EVL+ A + C ADIWS AC+ FEL TGD+LFEP 
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
            G +YT+D+DH+A IIELLG++P  ++++G  +  FF  +G LR+I  LK W L  VL E
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 298
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           KY ++ + A+  S+FL PML  DP+ RA A   + HPWL++
Sbjct: 299 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 73.2 bits (178), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 57  YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
           + ++C+  +     +Q+R YR+ EV++ A Y    D+WS+ C+  EL TG Y   P    
Sbjct: 246 FGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLP---- 300
Query: 117 TYTRDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL---- 171
               DE D LA +IELLG   ++++ +  R+  F + KG  R+       D   VL    
Sbjct: 301 --GEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
Query: 172 --VEKYNWTPES------ARG-----FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               K    PES       +G     F +FL+  L +DP +R T    L+HPWL+
Sbjct: 359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 57  YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
           + ++C+  +     +Q+R YR+ EV++ A Y    D+WS+ C+  EL TG Y   P    
Sbjct: 246 FGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLP---- 300
Query: 117 TYTRDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL---- 171
               DE D LA +IELLG   ++++ +  R+  F + KG  R+       D   VL    
Sbjct: 301 --GEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
Query: 172 --VEKYNWTPES------ARG-----FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               K    PES       +G     F +FL+  L +DP +R T    L+HPWL+
Sbjct: 359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 57  YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
           + ++C+  +     +Q+R YR+ EV++ A Y    D+WS+ C+  EL TG Y   P    
Sbjct: 246 FGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLP---- 300
Query: 117 TYTRDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL---- 171
               DE D LA +IELLG   ++++ +  R+  F + KG  R+       D   VL    
Sbjct: 301 --GEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
Query: 172 --VEKYNWTPES------ARG-----FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               K    PES       +G     F +FL+  L +DP +R T    L+HPWL+
Sbjct: 359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 37  EDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSV 96
           + +Q  + +S    L D G    A +   +    + TRQYR+ EV++N G+D S+D+WS 
Sbjct: 189 KKIQIYRTKSTGIKLIDFGC---ATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSF 245
Query: 97  ACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKKGE 155
            C+  EL TG  LF  H         +HLA +  ++  IPK ++    +++   +  K E
Sbjct: 246 GCVLAELYTGSLLFRTH------EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDE 299
Query: 156 L--------------RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA 201
           L              +H+    P  LY ++  +          F +FL  +L  DP LR 
Sbjct: 300 LKLAWPENASSINSIKHVKKCLP--LYKIIKHEL---------FCDFLYSILQIDPTLRP 348
Query: 202 TAADCLQHPWLQ 213
           + A+ L+H +L+
Sbjct: 349 SPAELLKHKFLE 360

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 40  QTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACM 99
           + R  RS+      +  + +A +  +H +  V TR YR+ EV++  G+    D+WS+ C+
Sbjct: 183 KKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 242
Query: 100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--- 156
            FE   G  LF+ H       + +HLA +  +LG IP R+I+   +   F+  +G L   
Sbjct: 243 IFEYYVGFTLFQTHD------NREHLAMMERILGPIPSRMIRKTRKQKYFY--RGRLDWD 294
Query: 157 ------RHI-PGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH 209
                 R++    KP   Y           E      + +  ML Y+P  R T  + LQH
Sbjct: 295 ENTSAGRYVRENCKPLRRY------LTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQH 348
Query: 210 PWL 212
           P+ 
Sbjct: 349 PFF 351

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           +  + +A +  +H T  V TR YR  EV++  G+    D+WS+ C+ FE   G  LF+ H
Sbjct: 215 VADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 274
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIP-GLKP 164
                  + +HL  + ++LG IP  +I    R  ++F K G +        R++    KP
Sbjct: 275 ------ENREHLVMMEKILGPIPSHMIHRT-RKQKYFYKGGLVWDENSSDGRYVKENCKP 327
Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              Y +       + E  + F + +R ML +DP  R T A+ L HP+ 
Sbjct: 328 LKSYML-----QDSLEHVQLF-DLMRRMLEFDPAQRITLAEALLHPFF 369

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           +  + +A +  +H T  V TR YR  EV++  G+    D+WS+ C+ FE   G  LF+ H
Sbjct: 192 VADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 251
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIP-GLKP 164
                  + +HL  + ++LG IP  +I    R  ++F K G +        R++    KP
Sbjct: 252 ------ENREHLVMMEKILGPIPSHMIHRT-RKQKYFYKGGLVWDENSSDGRYVKENCKP 304
Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              Y +       + E  + F + +R ML +DP  R T A+ L HP+ 
Sbjct: 305 LKSYML-----QDSLEHVQLF-DLMRRMLEFDPAQRITLAEALLHPFF 346

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           +  + +A +  +H T  V TR YR  EV++  G+    D+WS+ C+ FE   G  LF+ H
Sbjct: 183 VADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIP-GLKP 164
                  + +HL  + ++LG IP  +I    R  ++F K G +        R++    KP
Sbjct: 243 ------ENREHLVMMEKILGPIPSHMIHRT-RKQKYFYKGGLVWDENSSDGRYVKENCKP 295
Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              Y +       + E  + F + +R ML +DP  R T A+ L HP+ 
Sbjct: 296 LKSYML-----QDSLEHVQLF-DLMRRMLEFDPAQRITLAEALLHPFF 337

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I  + ++C + +   + +Q+R YRS EVL+   YD + D+WS+ C+  E+ TG+ LF   
Sbjct: 202 IVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF--- 258
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF------------TKKGE------ 155
              +   + D +  I+E+LG  P  I+    ++ +FF            TK G+      
Sbjct: 259 ---SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 156 ----LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
               L +I G++          +   T      F + +  ML YDPK R      LQH +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 212 LQ 213
            +
Sbjct: 376 FK 377

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I  + ++C + +   + +Q+R YRS EVL+   YD + D+WS+ C+  E+ TG+ LF   
Sbjct: 202 IVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF--- 258
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF------------TKKGE------ 155
              +   + D +  I+E+LG  P  I+    ++ +FF            TK G+      
Sbjct: 259 ---SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 156 ----LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
               L +I G++          +   T      F + +  ML YDPK R      LQH +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 212 LQ 213
            +
Sbjct: 376 FK 377

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I  + ++C + +   + +Q+R YRS EVL+   YD + D+WS+ C+  E+ TG+ LF   
Sbjct: 183 IVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF--- 239
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF------------TKKGE------ 155
              +   + D +  I+E+LG  P  I+    ++ +FF            TK G+      
Sbjct: 240 ---SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 296
Query: 156 ----LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
               L +I G++          +   T      F + +  ML YDPK R      LQH +
Sbjct: 297 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 356
Query: 212 LQ 213
            +
Sbjct: 357 FK 358

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 8   FVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQ---TRQYRSLPPFLFDIGTYRNACWVD 64
           F+    L  TD K      N  +V   +TE       R  R+L      +  + +A + D
Sbjct: 133 FLHSNKLTHTDLKPE----NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 65  KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
           +H +  V TR YR+ EV++  G+    D+WS+ C+  E   G  +F  H        ++H
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS------KEH 242
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
           LA +  +LG +PK +IQ   +   F   + +         WD +S       +   + + 
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLD---------WDEHS---SAGRYVSRACKP 290
Query: 185 FSEFL--------------RPMLAYDPKLRATAADCLQHPW 211
             EF+              + ML YDP  R T  + L+HP+
Sbjct: 291 LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R A   D      V TR YR+ EV++N   Y  + DIWSV C+  E+ TG  L
Sbjct: 169 ILDFGLARQA---DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F+   G  +    D L  I+++ G  P   +Q   +S E    K  ++ +P L+  D  S
Sbjct: 226 FK---GSDHL---DQLKEIMKVTGTPPAEFVQR-LQSDE---AKNYMKGLPELEKKDFAS 275
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +L    N +P +       L  ML  D + R TA + L HP+ ++
Sbjct: 276 ILT---NASPLAV----NLLEKMLVLDAEQRVTAGEALAHPYFES 313

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 8   FVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQ---TRQYRSLPPFLFDIGTYRNACWVD 64
           F+    L  TD K      N  +V   +TE       R  R+L      +  + +A + D
Sbjct: 133 FLHSNKLTHTDLKPE----NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 65  KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
           +H +  V  R YR+ EV++  G+    D+WS+ C+  E   G  +F  H        ++H
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS------KEH 242
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
           LA +  +LG +PK +IQ   +   F   + +         WD +S       +   + + 
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLD---------WDEHS---SAGRYVSRACKP 290
Query: 185 FSEFL--------------RPMLAYDPKLRATAADCLQHPW 211
             EF+              + ML YDP  R T  + L+HP+
Sbjct: 291 LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R AC  +   T  V TR YR+ EV++  GY  + DIWSV C+  EL  G  +F
Sbjct: 167 ILDFGLARTAC-TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
           +       T   D    +IE LG      + +   +   + +       PG+K  +L+  
Sbjct: 226 QG------TDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRP--KYPGIKFEELFPD 277
Query: 171 LV-----EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            +     E+       AR   + L  ML  DP  R +  + L+HP++
Sbjct: 278 WIFPSESERDKIKTSQAR---DLLSKMLVIDPDKRISVDEALRHPYI 321

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           L+    E        AR   + L  ML  DP  R +  D LQHP++ 
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 168 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 227 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 279
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 280 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 168 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 227 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 279
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 280 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 160 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 219 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 271
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 272 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 205 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 264 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 316
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 317 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 166 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 224
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 225 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 277
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 278 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 320

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 161 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 220 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 272
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 273 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           L+    E        AR   + L  ML  DP  R +  D LQHP++ 
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 160 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 219 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 271
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 272 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 161 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 220 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 272
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           L+    E        AR   + L  ML  DP  R +  D LQHP++
Sbjct: 273 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 205 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
               G  Y    D    +IE LG    +  K++  +     E   K   L   P L P  
Sbjct: 264 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 316
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           L+    E        AR   + L  ML  DP  R +  D LQHP++ 
Sbjct: 317 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+A   D   T  V TR YR+ EV+++   Y+ + DIWSV C+  E+ TG  L
Sbjct: 167 ILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 223
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F+   G  Y    D L  I+++ G      +Q  +  +     K  ++ +P     D   
Sbjct: 224 FK---GKDYL---DQLTQILKVTGVPGTEFVQKLNDKA----AKSYIQSLPQTPRKDFTQ 273
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +        P ++   ++ L  ML  D   R TAA  L HP+ +
Sbjct: 274 LF-------PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G  R        F+ +V T  YR+ +VL+ +  Y  S DIWS  C+  E+ TG  L
Sbjct: 149 LGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T DE+ L  I +++G   + +  S  +  ++        +I    P DL  
Sbjct: 209 FPG------TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP------NIQQRPPRDLRQ 256
Query: 170 VLVEKYNWTPESARG-FSEFLRPMLAYDPKLRATAADCLQHPW 211
           VL      T E   G   +FL  +L  +P +R +A   L HPW
Sbjct: 257 VLQPH---TKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+A   D   T  V TR YR+ EV+++   Y+ + DIWSV C+  E+ TG  L
Sbjct: 185 ILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F+   G  Y    D L  I+++ G      +Q  +  +     K  ++ +P     D   
Sbjct: 242 FK---GKDYL---DQLTQILKVTGVPGTEFVQKLNDKA----AKSYIQSLPQTPRKDFTQ 291
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +        P ++   ++ L  ML  D   R TAA  L HP+ +
Sbjct: 292 LF-------PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 257
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  +K  +    L  K    W    P+
Sbjct: 258 NHILGILGS----------------PSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPK 301
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           S     + L  ML ++P  R T  + L HP+L+ 
Sbjct: 302 SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ +VL+ +  Y  S DIWS+ C+  E+ TG  L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T   D+D L  I  +LG    R                E   +  L  W   +
Sbjct: 220 F---PGVT---DDDQLPKIFSILGTPNPR----------------EWPQVQELPLWKQRT 257
Query: 170 VLV-EKYNWT---PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             V EK  W+   P   +   + L  ML +DP  R +A D + HP+ ++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ +VL+ +  Y  S DIWS+ C+  E+ TG  L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T   D+D L  I  +LG    R                E   +  L  W   +
Sbjct: 220 F---PGVT---DDDQLPKIFSILGTPNPR----------------EWPQVQELPLWKQRT 257
Query: 170 VLV-EKYNWT---PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             V EK  W+   P   +   + L  ML +DP  R +A D + HP+ ++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R A   D+  T  V TR YR+ E+++N   Y+ + DIWSV C+  EL  G  L
Sbjct: 164 ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G  Y    D L  I+E++G     ++     SSE    +  ++ +P +   DL S
Sbjct: 221 F---PGSDYI---DQLKRIMEVVGTPSPEVL--AKISSEH--ARTYIQSLPPMPQKDLSS 270
Query: 170 VLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPW 211
           +            RG +    + L  ML  D   R +AA+ L H +
Sbjct: 271 IF-----------RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 305

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R A   D+  T  V TR YR+ E+++N   Y+ + DIWSV C+  EL  G  L
Sbjct: 172 ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G  Y    D L  I+E++G     ++     SSE    +  ++ +P +   DL S
Sbjct: 229 F---PGSDYI---DQLKRIMEVVGTPSPEVL--AKISSEH--ARTYIQSLPPMPQKDLSS 278
Query: 170 VLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPW 211
           +            RG +    + L  ML  D   R +AA+ L H +
Sbjct: 279 IF-----------RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R A   D+  T  V TR YR+ E+++N   Y+ + DIWSV C+  EL  G  L
Sbjct: 172 ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G  Y    D L  I+E++G     ++     SSE    +  ++ +P +   DL S
Sbjct: 229 F---PGSDYI---DQLKRIMEVVGTPSPEVL--AKISSEH--ARTYIQSLPPMPQKDLSS 278
Query: 170 VLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPW 211
           +            RG +    + L  ML  D   R +AA+ L H +
Sbjct: 279 IF-----------RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 195 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQ--SGHRSSEFFTKKGELRHIPGLKPWDL 167
           F        T   + L  I+ L G  P  +I     H +  +      +  +P +   + 
Sbjct: 252 FPG------TDHINQLQQIMRLTGTPPASVISRMPSHEARNY------INSLPQMPKRNF 299
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
             V +      P +     + L  ML  D   R TA++ L HP+
Sbjct: 300 ADVFI---GANPLAV----DLLEKMLVLDTDKRITASEALAHPY 336

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 239
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP--GLKPWDLYSVLVEKYNWTPESAR 183
            HI+ +LG   +  +  G         +  L  +P     PW+            P +  
Sbjct: 240 NHILGILGSPSQEDLNCGIN----LKARNYLLSLPHKNKVPWN---------RLFPNADS 286
Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              + L  ML ++P  R      L HP+L
Sbjct: 287 KALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A   +   T  V TR YR+ EV++  GY  + DIWSV C+  EL  G  +F
Sbjct: 165 ILDFGLARTAS-TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF-----TKKGELRHIPGLKPW 165
           +       T   D    +IE          Q G  S+EF      T +  + + P   P 
Sbjct: 224 QG------TDHIDQWNKVIE----------QLGTPSAEFMAALQPTVRNYVENRPAY-PG 266
Query: 166 DLYSVLVEKYNWTPESARG------FSEFLRPMLAYDPKLRATAADCLQHPWL 212
             +  L   + +  ES R         + L  ML  DP  R +  + L+HP++
Sbjct: 267 IAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 238 NHILGILGS----------------PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 238 NHILGILGS----------------PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 235
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                  ++ +L  I  LK  +    L  K    W    P 
Sbjct: 236 NHILGILGS----------------PEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 279
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 280 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 239
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 240 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 283
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 284 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 238 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 242
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 243 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 286
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 287 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 243
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 244 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 287
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 288 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 234
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 235 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 279 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 238 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 257
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 258 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 301
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 302 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 235
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 236 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 279
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 280 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 257
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 258 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 301
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 302 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 245
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 246 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 289
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 290 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 238 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T +V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
                   T   D    +IE LG   P+  + +Q   R+      K        L P  L
Sbjct: 226 ------PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNALKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 239
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 240 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 283
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           +     + L  ML ++P  R      L HP+L
Sbjct: 284 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++NA  Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 19/165 (11%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L D G  R      + ++ +V T  YR  +VL  A  Y  S D+WS  C+  ELA     
Sbjct: 142 LADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
             P   D     +D L  I  LLG   +    S             +  +P  KP+ +Y 
Sbjct: 202 LFP-GNDV----DDQLKRIFRLLGTPTEEQWPS-------------MTKLPDYKPYPMYP 243
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                 N  P+      + L+ +L  +P  R +A + LQHP+  +
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
             E V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 28/153 (18%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
             E V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 242
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
            HI+ +LG                   + +L  I  LK  +    L  K    W    P 
Sbjct: 243 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 286
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +     + L  ML ++P  R      L HP+L+
Sbjct: 287 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 73  TRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIEL 131
           +R YR+ E+++ A  Y  S D+WS+ C+  EL  G  LF   +G+T     D L  II++
Sbjct: 204 SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF---SGETSI---DQLVRIIQI 257
Query: 132 LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRP 191
           +G   K   +   R +  +T   E+R  P LK  D   +L E    TP  A    + L  
Sbjct: 258 MGTPTK---EQMIRMNPHYT---EVR-FPTLKAKDWRKILPE---GTPSLA---IDLLEQ 304
Query: 192 MLAYDPKLRATAADCLQHPW 211
           +L Y+P LR    + + HP+
Sbjct: 305 ILRYEPDLRINPYEAMAHPF 324

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 67  FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDH 124
           ++ +V T  YR  +VL  A  Y  S D+WS  C+  ELA  G  LF  +  D      D 
Sbjct: 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD------DQ 211
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
           L  I  LLG   +    S             +  +P  KP+ +Y       N  P+    
Sbjct: 212 LKRIFRLLGTPTEEQWPS-------------MTKLPDYKPYPMYPATTSLVNVVPKLNAT 258
Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             + L+ +L  +P  R +A + LQHP+  +
Sbjct: 259 GRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
                   T   D    +IE LG   P+  + +Q   R+      K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF
Sbjct: 168 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
                   T   D    +IE LG   P+  + +Q   R+      K        L P  L
Sbjct: 227 PG------TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 280
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 281 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 323

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 162 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 164 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 221 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 270
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 271 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 305

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 162 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 162 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 177 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 234 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 283
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 284 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 318

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 178 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 284
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 285 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 319

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 178 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 284
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 285 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 319

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 178 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 284
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 285 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 319

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 177 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 234 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 283
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 284 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 318

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 163 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 220 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 269
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 270 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 304

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 176 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 233 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 282
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 283 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 317

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 185 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 242 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 291
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 292 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 326

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 185 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 242 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 291
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 292 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 326

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 186 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 243 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 292
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 293 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 327

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 189 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 246 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 295
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 296 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 330

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 163 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 220 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 269
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 270 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 304

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYL 109
           L D G  R      + + ++V TR YR+ E+L+ +  Y  + D+W++ C+  E+  G+ L
Sbjct: 165 LCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGD-IPKRIIQSGHRSSEFFTKKGELRHI--PGLKPWD 166
           F    GD+   D D L HI+  LG+ IP        R  E F K      +  P +K  +
Sbjct: 225 F---PGDS---DIDQLYHIMMCLGNLIP--------RHQELFNKNPVFAGVRLPEIKERE 270
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               L  +Y   P+ +    +  +  L  DP  R   A+ L H + Q
Sbjct: 271 ---PLERRY---PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 151 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 210
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 211 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 255
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 256 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 296

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 165 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 222 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 271
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 272 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 306

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 186 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 243 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 292
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 293 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 327

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 173 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 148 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 208 F---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK--------PSFPKWARQD 252
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 253 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 293

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 151 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 210
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 211 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 255
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 256 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 296

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 145 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +T +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDAGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G+ +     + + +  + +R YR+ E++  A  Y  + DIWS  C+  EL  G  L
Sbjct: 183 LIDFGSAKILIAGEPNVSX-ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F   +G       D L  II++LG   +  I++   +  +   K      P ++P     
Sbjct: 242 FPGESGI------DQLVEIIKVLGTPSREQIKT--MNPNYMEHK-----FPQIRPHPFSK 288
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V      + P +     + +  +L Y P  R TA + L HP+
Sbjct: 289 V------FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDYGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLCRHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
            T+ V TR YR+ E+L+ +  Y    D+WS+ C+  E+  G  +F    G +     + +
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF---PGSSTMNQLERI 243
Query: 126 AHIIELLGDIPKRIIQSGHRSS--EFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
             +I+   +     IQS    +  E   +K E+R       +  +  L+ K N   +   
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWL 212
              + L  +L ++P  R +A D L+HP++
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFV 332

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 67  FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH- 124
            TE V TR YR+ EV++ +A Y  + D+WS  C+  EL     +F         RD  H 
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQ 231
Query: 125 LAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
           L  I  ++G    D   R I+S  R+ E+            +K   +Y     +  +   
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESP-RAREY------------IKSLPMYPAAPLEKMFPRV 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + +G  + L+ ML +DP  R TA + L+HP+LQ 
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQT 311

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF        T   D    +IE
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF------PGTDHIDQWNKVIE 241
Query: 131 LLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE 187
            LG   P+  + +Q   R+      K        L P  L+    E        AR   +
Sbjct: 242 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR---D 298
Query: 188 FLRPMLAYDPKLRATAADCLQHPWL 212
            L  ML  D   R +  + LQHP++
Sbjct: 299 LLSKMLVIDASKRISVDEALQHPYI 323

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D      V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 186 ILDFGLARHT---DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 243 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 292
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 293 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 327

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDGGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDRGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 64  DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  LF        T   
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG------TDHI 229
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +V +      P + 
Sbjct: 230 DQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFANVFI---GANPLAV 282
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPW 211
               + L  ML  D   R TAA  L H +
Sbjct: 283 ----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 64  DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  LF        T   
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG------TDHI 229
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +V +      P + 
Sbjct: 230 DQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFANVFI---GANPLAV 282
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPW 211
               + L  ML  D   R TAA  L H +
Sbjct: 283 ----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D      V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 162 ILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+        T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 173 ILDFGLARHTA---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D      V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 189 ILDFGLARHT---DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 246 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 295
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 296 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 330

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D      V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+        T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 173 ILDFGLARHTA---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 67  FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH- 124
            TE V TR YR+ EV++ +A Y  + D+WS  C+  EL     +F         RD  H 
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQ 231
Query: 125 LAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
           L  I  ++G    D   R I+S  R+ E+            +K   +Y     +  +   
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESP-RAREY------------IKSLPMYPAAPLEKMFPRV 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + +G  + L+ ML +DP  R TA + L+HP+LQ 
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQT 311

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+    D      V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 166 ILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
           + D G  R+        T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  L
Sbjct: 173 ILDFGLARHTA---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F        T   D L  I+ L+G     +++    SSE  + +  ++ +  +   +  +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
           V +      P +     + L  ML  D   R TAA  L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A         +V TR YR+ EV++  GY  + DIWSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
               G  Y    D    +IE LG   P   + +Q   R+      K        L P  L
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 143 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 143 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 148 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 208 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 252
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 253 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 293

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + D+WSV C+  E+     LF
Sbjct: 172 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 230
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
               G  Y    D    +IE LG   P+  + +Q   R+      K        L P  L
Sbjct: 231 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 284
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 285 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 327

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + D+WSV C+  E+     LF
Sbjct: 161 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 219
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
               G  Y    D    +IE LG   P+  + +Q   R+      K        L P  L
Sbjct: 220 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 273
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 274 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
           L D G  R      + +  +V T  YR+ E+L+   Y  +A DIWS+ C+  E+ T   L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
           F    GD+   + D L  I   LG  P  ++  G  S   +         P    W    
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +S +V   +   E  R     L  ML YDP  R +A   L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A         +V TR YR+ EV++  GY  + D+WSV C+  E+     LF
Sbjct: 167 ILDFGLARTA-GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
               G  Y    D    +IE LG   P+  + +Q   R+      K        L P  L
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           +    E        AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV  +  E+  G  LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           +    E        AR   + L  ML  D   R +  + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 242
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 295
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 296 L----DFLDKLLRYDHQSRLTAREAMEHPYF 322

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 243
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 296
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 297 L----DFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 26/169 (15%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYL 109
           L D G  R       ++ ++V TR YRS E+L+ +  Y    D+W++ C+  EL +G  L
Sbjct: 143 LCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGD-IPKRIIQSGHRSSEFFTKKGELRHIPGLK---PW 165
           +   +      D D L  I + LGD IP+   Q    ++++F+         G+K   P 
Sbjct: 203 WPGKS------DVDQLYLIRKTLGDLIPRH--QQVFSTNQYFS---------GVKIPDPE 245
Query: 166 DLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           D+  + + K+      A G    L+  L  DP  R T    L HP+ +N
Sbjct: 246 DMEPLEL-KFPNISYPALG---LLKGCLHMDPTERLTCEQLLHHPYFEN 290

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  R A       T  V TR YR+ EV++  GY  + DIWSV  +  E+  G  LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
                   T   D    +IE LG      ++    +   + +   K        L P  L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           +    E        AR   + L  ML  D   R +  + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 243
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 296
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 297 L----DFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 249
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 250 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 302
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 303 L----DFLDKLLRYDHQSRLTAREAMEHPYF 329

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71  VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
           V +R ++  E+L++   YD S D+WS+ CM   LA+  +  EP  H  D Y    D L  
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           I ++LG       I K  I+   R ++   +    R       W+ +     ++  +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
                +FL  +L YD + R TA + ++HP+ 
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 22/165 (13%)
Query: 53  DIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD 107
           D G  R  C          TE V TR YR+ E++++   Y  + D+WSV C+  E+    
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
            LF    G  Y      L  I+ +LG     +IQ+          +  ++ +P  +P   
Sbjct: 261 QLF---PGKNYVH---QLQLIMMVLGTPSPAVIQAVGAER----VRAYIQSLPPRQPVPW 310
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            +V        P + R     L  ML ++P  R +AA  L+HP+L
Sbjct: 311 ETVY-------PGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 22/165 (13%)
Query: 53  DIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD 107
           D G  R  C          TE V TR YR+ E++++   Y  + D+WSV C+  E+    
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
            LF    G  Y      L  I+ +LG     +IQ+          +  ++ +P  +P   
Sbjct: 262 QLF---PGKNYVH---QLQLIMMVLGTPSPAVIQAVGAER----VRAYIQSLPPRQPVPW 311
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
            +V        P + R     L  ML ++P  R +AA  L+HP+L
Sbjct: 312 ETVY-------PGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L D G  R      K +  +V T  YR  ++L+ +  Y    D+W V C+ +E+ATG  L
Sbjct: 141 LADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL 200
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F    G T    E+ L  I  +LG  P      G  S+E F    +  + P  +   L S
Sbjct: 201 F---PGSTV---EEQLHFIFRILG-TPTEETWPGILSNEEF----KTYNYPKYRAEALLS 249
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
                    P      ++ L  +L ++ + R +A D ++HP+
Sbjct: 250 -------HAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 67  FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH- 124
             E V TR YR+ EV++ +A Y  + D+WS  C+  EL     +F         RD  H 
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQ 231
Query: 125 LAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
           L  I  ++G    D   R I+S  R+ E+            +K   +Y     +  +   
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESP-RAREY------------IKSLPMYPAAPLEKMFPRV 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + +G  + L+ ML +DP  R TA + L+HP+LQ 
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQT 311

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
            T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G++   + D L 
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
            I +L+G  P+          +    +G     P   P  + SV+       PE     +
Sbjct: 230 KIFDLIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGA 274
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + L  ML ++P  R +A   LQH +L  
Sbjct: 275 QLLLEMLTFNPHKRISAFRALQHSYLHK 302

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 182 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 235
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 236 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 294
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 295 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 321

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 181 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 234
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 235 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 293
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 294 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 320

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 181 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 234
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 235 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 293
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 294 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 320

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG     +  + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G++   + D L  I +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 225
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
           L+G  P+          +    +G     P   P  + SV+       PE     ++ L 
Sbjct: 226 LIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGAQLLL 270
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
            ML ++P  R +A   LQH +L  
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHK 294

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G++   + D L  I +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 225
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
           L+G  P+          +    +G     P   P  + SV+       PE     ++ L 
Sbjct: 226 LIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGAQLLL 270
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
            ML ++P  R +A   LQH +L  
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHK 294

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G++   + D L  I +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 225
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
           L+G  P+          +    +G     P   P  + SV+       PE     ++ L 
Sbjct: 226 LIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGAQLLL 270
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
            ML ++P  R +A   LQH +L  
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHK 294

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)
Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
           D G  R      + +T +V T  YR+ +VL+ +  Y  + DIWSV C+  E+  G  LF 
Sbjct: 143 DFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF- 201
Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           P   +      D L  I  +LG    +                   ++  L  +D    +
Sbjct: 202 PGVSEA-----DQLMRIFRILGTPNSK----------------NWPNVTELPKYDPNFTV 240
Query: 172 VEKYNWTPES-ARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
            E   W  ES  +G  E     L  ML  DP  R TA   L+H + +
Sbjct: 241 YEPLPW--ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 65/167 (38%), Gaps = 30/167 (17%)
Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
           D G  R      + +T +V T  YR+ +VL+ +  Y  + DIWSV C+  E+  G  LF 
Sbjct: 143 DFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFP 202
Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
                    + D L  I  +LG    +                   ++  L  +D    +
Sbjct: 203 G------VSEADQLMRIFRILGTPNSK----------------NWPNVTELPKYDPNFTV 240
Query: 172 VEKYNWTPES-ARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
            E   W  ES  +G  E     L  ML  DP  R TA   L+H + +
Sbjct: 241 YEPLPW--ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 37/188 (19%)
Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLE-VLINAGYDCSADIWSVACMAFELAT----- 105
            ++ T+ +   + +  T  V TR YR+ E +L+   Y  + D+WS+ C+  EL       
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284
Query: 106 ------------GDYLF----EPHAGDTY---TR-DEDHLAHIIELLGDIPKRIIQSGHR 145
                       G   F    +  AG+ +   TR + D L  I  +LG   +  I++  +
Sbjct: 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEK 344
Query: 146 SSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAAD 205
                  K  +R  P  +  DL     E++   P S+      L+ ML ++P  R T  +
Sbjct: 345 ED----AKRYIRIFPKREGTDL----AERF---PASSADAIHLLKRMLVFNPNKRITINE 393
Query: 206 CLQHPWLQ 213
           CL HP+ +
Sbjct: 394 CLAHPFFK 401

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)
Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
           D G  R      + +T ++ T  YR+ +VL+ +  Y  + DIWSV C+  E+  G  LF 
Sbjct: 143 DFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF- 201
Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           P   +      D L  I  +LG    +                   ++  L  +D    +
Sbjct: 202 PGVSEA-----DQLMRIFRILGTPNSK----------------NWPNVTELPKYDPNFTV 240
Query: 172 VEKYNWTPES-ARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
            E   W  ES  +G  E     L  ML  DP  R TA   L+H + +
Sbjct: 241 YEPLPW--ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 65  KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
           K +   V +R ++  E+L++   YD S D+WS+ CM A  +   +  F  H       + 
Sbjct: 201 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 254
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG        + +R  E   +   L      KPW  +     ++  +PE+ 
Sbjct: 255 DQLVKIAKVLGTDGLNAYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 313
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               +FL  +L YD + R TA + + HP+ Q
Sbjct: 314 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 340

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 25/146 (17%)
Query: 71  VQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           + +R YR+ E++  N  Y  + DIWSV C+  E+  G+ +F    GD        L  I+
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR---GDN---SAGQLHEIV 245
Query: 130 ELLGDIPKRIIQS---GHRSSEFFTKKGELRHIPGLKPW-DLYSVLVEKYNWTPESARGF 185
            +LG   + +++     H   + +  KG         PW +++S      + + + A+  
Sbjct: 246 RVLGCPSREVLRKLNPSHTDVDLYNSKG--------IPWSNVFS------DHSLKDAKEA 291
Query: 186 SEFLRPMLAYDPKLRATAADCLQHPW 211
            + L  +L Y P+ R    + L HP+
Sbjct: 292 YDLLSALLQYLPEERMKPYEALCHPY 317

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 43/159 (27%)
Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
            T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF   +      D D L 
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
            I++++G                         +PG + W    V + +  +  +SA+   
Sbjct: 230 KILDVIG-------------------------LPGEEDWP-RDVALPRQAFHSKSAQPIE 263
Query: 187 EFLRPM-----------LAYDPKLRATAADCLQHPWLQN 214
           +F+  +           L ++P  R +A   L HP+ Q+
Sbjct: 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 43/159 (27%)
Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
            T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF   +      D D L 
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
            I++++G                         +PG + W    V + +  +  +SA+   
Sbjct: 230 KILDVIG-------------------------LPGEEDWP-RDVALPRQAFHSKSAQPIE 263
Query: 187 EFLRPM-----------LAYDPKLRATAADCLQHPWLQN 214
           +F+  +           L ++P  R +A   L HP+ Q+
Sbjct: 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 43/158 (27%)
Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
            T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF   +      D D L 
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
            I++++G                         +PG + W    V + +  +  +SA+   
Sbjct: 230 KILDVIG-------------------------LPGEEDWP-RDVALPRQAFHSKSAQPIE 263
Query: 187 EFLRPM-----------LAYDPKLRATAADCLQHPWLQ 213
           +F+  +           L ++P  R +A   L HP+ Q
Sbjct: 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 50  FLFDIGTYRNACWVDKHFT------EDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFE 102
            +  IG +  A  +D H++      E + T+ YRS  +L++   Y  + D+W+  C+  E
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217
Query: 103 LATGDYLFEPHAGDTYTRDEDHLAHIIE----LLGDIPKRIIQSGHRSSEFFTKKGELRH 158
           + TG  LF   AG          AH +E    +L  IP  ++    R          L  
Sbjct: 218 MLTGKTLF---AG----------AHELEQMQLILESIP--VVHEEDRQEL-------LSV 255
Query: 159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           IP     D+           P  +R   +FL  +L + P  R TA + L HP++
Sbjct: 256 IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
           + +R ML + P LR TA  CL+HPW+Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 231
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 232 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 251
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 231
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 232 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 251
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 230
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 231 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 250
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 251 LDLVKKLLVVDPKARFTTEEALRHPWLQD 279

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 370
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 371 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 390
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 391 LDLVKKLLVVDPKARFTTEEALRHPWLQD 419

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 356
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 357 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 376
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWLQD 405

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 231
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 232 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 251
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73  TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  Y + EVL++   AGY+ + D WS+  + F   +G   F  H      +D+       
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 237
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
                     I SG                              KYN+ PE     SE  
Sbjct: 238 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 257
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
              ++ +L  DPK R T  + L+HPWLQ+
Sbjct: 258 LDLVKKLLVVDPKARFTTEEALRHPWLQD 286

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFE 111
           D G  R      + FT ++ T  YR  E+L+ +  Y  S DIWS+AC+  E+     LF 
Sbjct: 180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF- 238
Query: 112 PHAGDTYTRDEDHLAHIIELLG 133
              GD+   + D L  I E+LG
Sbjct: 239 --PGDS---EIDQLFKIFEVLG 255

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + +R ML + P LR TA  CL+HPW+Q 
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + +R ML + P LR TA  CL+HPW+Q 
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-77
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-69
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-40
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-35
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-34
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-34
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-33
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-21
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-21
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-18
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-18
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-18
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-18
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-17
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-17
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-17
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-17
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-17
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-17
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-17
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-17
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-17
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-17
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-17
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	6e-17
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-17
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	7e-17
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-17
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	9e-17
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-16
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-16
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-16
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-16
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-16
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-16
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-14
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-14
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-12
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-12
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-12
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-11
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-11
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-11
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-11
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-11
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-10
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-10
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-10
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-10
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-10
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	9e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	6e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-05
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-05
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	9e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-04

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  237 bits (606), Expect = 1e-77
 Identities = 112/194 (57%), Positives = 138/194 (71%), Gaps = 3/194 (1%)

Query: 21  RRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLE 80
                             ++ +    L   + D+G   NACWV KHFTED+QTRQYRSLE
Sbjct: 207 GSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG---NACWVHKHFTEDIQTRQYRSLE 263

Query: 81  VLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRII 140
           VLI +GY+  ADIWS ACMAFELATGDYLFEPH+G+ YTRDEDH+A IIELLG +P+++I
Sbjct: 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 323

Query: 141 QSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLR 200
            +G  S EFFTKKG+L+HI  LKPW L+ VLVEKY W+ E A GF++FL PML   P+ R
Sbjct: 324 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKR 383

Query: 201 ATAADCLQHPWLQN 214
           ATAA+CL+HPWL +
Sbjct: 384 ATAAECLRHPWLNS 397

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  215 bits (550), Expect = 2e-69
 Identities = 81/156 (51%), Positives = 111/156 (71%)

Query: 59  NACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
           NACW D+H+T  +QTR+YRS EVL+ A + C ADIWS AC+ FEL TGD+LFEP  G +Y
Sbjct: 184 NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
           T+D+DH+A IIELLG++P  ++++G  +  FF  +G LR+I  LK W L  VL EKY ++
Sbjct: 244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS 303

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            + A+  S+FL PML  DP+ RA A   + HPWL++
Sbjct: 304 KDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  140 bits (354), Expect = 2e-40
 Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 59  NACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
            A +   +    + TRQYR+ EV++N G+D S+D+WS  C+  EL TG  LF        
Sbjct: 208 CATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR------- 260

Query: 119 TRDE-DHLAHIIELLGDIPKRIIQSGHRS-SEFFTKKGELRHIPGLKPWDLYSVLVEKYN 176
           T +  +HLA +  ++  IPK ++    ++    +  K EL+         + S+   K  
Sbjct: 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKC 320

Query: 177 WTPESA---RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                      F +FL  +L  DP LR + A+ L+H +L+
Sbjct: 321 LPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  127 bits (321), Expect = 4e-35
 Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 25/172 (14%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
           +C+  +     +Q+R YR+ EV++ A Y    D+WS+ C+  EL TG  L          
Sbjct: 249 SCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP-------G 301

Query: 120 RDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY--- 175
            DE D LA +IELLG   ++++ +  R+  F + KG  R+       D   VL       
Sbjct: 302 EDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRR 361

Query: 176 ---NWTPESARG-----------FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                 PES              F +FL+  L +DP +R T    L+HPWL+
Sbjct: 362 GKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  125 bits (315), Expect = 1e-34
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 22/164 (13%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
           A +  +H T  V TR YR  EV++  G+    D+WS+ C+ FE   G  LF+       T
Sbjct: 189 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ-------T 241

Query: 120 RDE-DHLAHIIELLGDIPKRIIQSGHRSSEFF--------TKKGELRHIPGLKPWDLYSV 170
            +  +HL  + ++LG IP  +I    +   F+                    KP  L S 
Sbjct: 242 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP--LKSY 299

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +++             + +R ML +DP  R T A+ L HP+   
Sbjct: 300 MLQ----DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  123 bits (312), Expect = 2e-34
 Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 22/162 (13%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
           A + D+H +  V TR YR+ EV++  G+    D+WS+ C+  E   G  +F        T
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP-------T 236

Query: 120 RDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIPGLKPWDLYSV 170
            D  +HLA +  +LG +PK +IQ   +   F   + +               KP  L   
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP--LKEF 294

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           ++ +            + ++ ML YDP  R T  + L+HP+ 
Sbjct: 295 MLSQ----DVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  122 bits (307), Expect = 2e-33
 Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 30/177 (16%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
           +C + +   + +Q+R YRS EVL+   YD + D+WS+ C+  E+ TG+ LF         
Sbjct: 208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS-------G 260

Query: 120 RDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE----------------------L 156
            +E D +  I+E+LG  P  I+    ++ +FF K  +                      L
Sbjct: 261 ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKL 320

Query: 157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
            +I G++          +   T      F + +  ML YDPK R      LQH + +
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 88.8 bits (221), Expect = 2e-21
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 18/151 (11%)

Query: 65  KHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           + + ++V TR YR+ E+L+    Y  + D+W++ C+  E+  G+ LF    GD+   D D
Sbjct: 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF---PGDS---DID 232

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L HI+  LG++  R  Q     +  F           L        L  +Y    E   
Sbjct: 233 QLYHIMMCLGNLIPRH-QELFNKNPVF-------AGVRLPEIKEREPLERRYPKLSEVVI 284

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +  +  L  DP  R   A+ L H + Q 
Sbjct: 285 ---DLAKKCLHIDPDKRPFCAELLHHDFFQM 312

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 87.2 bits (217), Expect = 8e-21
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 18/151 (11%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            ++ ++V TR YRS E+L+    Y    D+W++ C+  EL +G  L+    G +   D D
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLW---PGKS---DVD 210

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I + LGD      Q    ++++F           +   +    L  K+      A 
Sbjct: 211 QLYLIRKTLGD-LIPRHQQVFSTNQYF-------SGVKIPDPEDMEPLELKFPNISYPAL 262

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                L+  L  DP  R T    L HP+ +N
Sbjct: 263 ---GLLKGCLHMDPTERLTCEQLLHHPYFEN 290

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 81.3 bits (201), Expect = 2e-18
 Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 12/153 (7%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
               T  V TR YR+ EV++  GY  + DIWSV C+  E+  G  LF    G  +    D
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP---GTDHI---D 233

Query: 124 HLAHIIELLGDIPKRIIQS-GHRSSEFFTKKGELRHIP--GLKPWDLYSVLVEKYNWTPE 180
               +IE LG      ++        +   + +        L P  L+    E       
Sbjct: 234 QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKAS 293

Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
            AR   + L  ML  D   R +  + LQHP++ 
Sbjct: 294 QAR---DLLSKMLVIDASKRISVDEALQHPYIN 323

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 81.8 bits (202), Expect = 2e-18
 Identities = 43/153 (28%), Positives = 61/153 (39%), Gaps = 12/153 (7%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
               T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF    G  Y    D
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYI---D 270

Query: 124 HLAHIIELLGDIPKRIIQS-GHRSSEFFTKKGELRHIP--GLKPWDLYSVLVEKYNWTPE 180
               +IE LG      ++        +   + +   +    L P  L+    E       
Sbjct: 271 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 330

Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
            AR   + L  ML  DP  R +  D LQHP++ 
Sbjct: 331 QAR---DLLSKMLVIDPAKRISVDDALQHPYIN 360

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 63  VDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
                T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G++   + 
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EA 225

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I +L+G +P         S         L       P      +        ES 
Sbjct: 226 DQLGKIFDLIG-LPPEDDWPRDVS---------LPR-GAFPPRG-PRPVQSVVPEMEESG 273

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
               + L  ML ++P  R +A   LQH +L  
Sbjct: 274 A---QLLLEMLTFNPHKRISAFRALQHSYLHK 302

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 79.9 bits (198), Expect = 4e-18
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 31/153 (20%)

Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
            T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF    G +   D D L 
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF---RGSS---DVDQLG 229

Query: 127 HIIELLGDIPKRIIQSGHRS---SEFFT-KKGELR-HIPGLKPWDLYSVLVEKYNWTPES 181
            I++++G +P         +     F +     +   +  +                   
Sbjct: 230 KILDVIG-LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI------------------D 270

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             G  + L   L ++P  R +A   L HP+ Q+
Sbjct: 271 ELGK-DLLLKCLTFNPAKRISAYSALSHPYFQD 302

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 29/156 (18%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
             H +E + T+ YRS  +L++   Y  + D+W+  C+  E+ TG  LF   AG       
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF---AGAHEL--- 231

Query: 123 DHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
           + +  I+E +      D  +  + S             +R+        L     +    
Sbjct: 232 EQMQLILESIPVVHEEDRQE--LLSVIPVY--------IRNDMTEPHKPLT----QLLPG 277

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               A    +FL  +L + P  R TA + L HP++ 
Sbjct: 278 ISREAV---DFLEQILTFSPMDRLTAEEALSHPYMS 310

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 19/151 (12%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           + FT ++ T  YR  E+L+ +  Y  S DIWS+AC+  E+     LF    GD+   + D
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF---PGDS---EID 245

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I E+LG +P      G  +   +              +   ++         +   
Sbjct: 246 QLFKIFEVLG-LPDDTTWPGVTALPDW--------KQSFPKFRGKTLKRVLGALLDDEGL 296

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + L  ML  DP  R +A + L+HP+  +
Sbjct: 297 ---DLLTAMLEMDPVKRISAKNALEHPYFSH 324

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 77.9 bits (193), Expect = 1e-17
 Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 20/151 (13%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           + +T ++ T  YR+ +VL+ +  Y  + DIWSV C+  E+  G  LF    G +   + D
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF---PGVS---EAD 208

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I  +LG  P                   L                       ES  
Sbjct: 209 QLMRIFRILG-TPNSKNWPNVTE---------LPKYDPNFTVYEPLPWESFLKGLDESGI 258

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + L  ML  DP  R TA   L+H + + 
Sbjct: 259 ---DLLSKMLKLDPNQRITAKQALEHAYFKE 286

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 21/151 (13%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           + +T  V TR YR+ E+L  A  Y    D+W+V C+  EL           GD+   D D
Sbjct: 167 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL---PGDS---DLD 220

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I E LG  P         S         L      K +     L   ++   +   
Sbjct: 221 QLTRIFETLG-TPTEEQWPDMCS---------LPDYVTFKSFP-GIPLHHIFSAAGDDLL 269

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + ++ +  ++P  R TA   L+  +  N
Sbjct: 270 ---DLIQGLFLFNPCARITATQALKMKYFSN 297

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 19/151 (12%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           + +T +V T  YR+ +VL+ +  Y  S DIWS+ C+  E+ TG  LF    G T   D+D
Sbjct: 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF---PGVT---DDD 227

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I  +LG  P        +    + ++         + +              +   
Sbjct: 228 QLPKIFSILG-TPNPREWPQVQELPLWKQR-------TFQVF-EKKPWSSIIPGFCQEGI 278

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + L  ML +DP  R +A D + HP+ ++
Sbjct: 279 ---DLLSNMLCFDPNKRISARDAMNHPYFKD 306

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 78.1 bits (193), Expect = 3e-17
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 30/153 (19%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
               + +R YR+ E++  A  Y  + DIWS  C+  EL  G  LF    G++     D L
Sbjct: 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF---PGESG---IDQL 251

Query: 126 AHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
             II++LG      I    +   +   +F          P ++P     V   +   TP 
Sbjct: 252 VEIIKVLGTPSREQIKT--MNPNYMEHKF----------PQIRPHPFSKVFRPR---TPP 296

Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
            A    + +  +L Y P  R TA + L HP+  
Sbjct: 297 DAI---DLISRLLEYTPSARLTAIEALCHPFFD 326

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 76.8 bits (190), Expect = 3e-17
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDE 122
           + ++ +V T  YR  +VL  A  Y  S D+WS  C+  ELA  G  LF    G+     +
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF---PGND---VD 209

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I  LLG  P                   L        +   + LV        + 
Sbjct: 210 DQLKRIFRLLG-TPTEEQWPSMTK---------LPDYKPYPMYPATTSLVNVVPKLNATG 259

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           R   + L+ +L  +P  R +A + LQHP+  +
Sbjct: 260 R---DLLQNLLKCNPVQRISAEEALQHPYFSD 288

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 77.3 bits (191), Expect = 4e-17
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 27/155 (17%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
            +     + +R YR+ E++     Y  + DIWSV C+  E+  G+ +F    GD      
Sbjct: 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF---RGDNSA--- 238

Query: 123 DHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
             L  I+ +LG      + K  +   H   + +  KG         PW   +V  +    
Sbjct: 239 GQLHEIVRVLGCPSREVLRK--LNPSHTDVDLYNSKG--------IPWS--NVFSDHSLK 286

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
             + A    + L  +L Y P+ R    + L HP+ 
Sbjct: 287 DAKEAY---DLLSALLQYLPEERMKPYEALCHPYF 318

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 77.3 bits (191), Expect = 4e-17
 Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
              +T  V T  YR  E+L+    Y    D+W   C+  E+ T   +     G+T   ++
Sbjct: 182 PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM---QGNT---EQ 235

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLY-SVLVEKYNWTPES 181
             LA I +L G I          + E +           L+        + ++       
Sbjct: 236 HQLALISQLCGSI----------TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD 285

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                + +  +L  DP  R  + D L H +  +
Sbjct: 286 PYAL-DLIDKLLVLDPAQRIDSDDALNHDFFWS 317

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 77.8 bits (192), Expect = 5e-17
 Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 32/154 (20%)

Query: 67  FTEDVQTRQYRSLEVLINA-GYDCSADIWSVAC-MAFELATGDYLFEPHAGDTYTRDEDH 124
               + +R YR+ E++  A  Y  S D+WS  C +A EL  G  +F    GD+     D 
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA-ELLLGQPIF---PGDSGV---DQ 265

Query: 125 LAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
           L  II++LG      I +  +   +   +F          P +K      V   +   TP
Sbjct: 266 LVEIIKVLGTPTREQIRE--MNPNYTEFKF----------PQIKAHPWTKVFRPR---TP 310

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             A         +L Y P  R T  +   H +  
Sbjct: 311 PEAI---ALCSRLLEYTPTARLTPLEACAHSFFD 341

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 77.0 bits (190), Expect = 6e-17
 Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 27/156 (17%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           D + T  V  R YR+ E+++   G+    D+WS  C+  E+     LF    G T+    
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR---GSTFY--- 240

Query: 123 DHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
           + L  I+E++G     D+      S   + ++   +  L ++P  + W            
Sbjct: 241 NQLNKIVEVVGTPKIEDVVM--FSS-PSARDYL--RNSLSNVPA-RAWT------AVVPT 288

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               A    + +  ML ++P+ R +    L+HP+ +
Sbjct: 289 ADPVAL---DLIAKMLEFNPQRRISTEQALRHPYFE 321

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 77.0 bits (190), Expect = 6e-17
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 28/157 (17%)

Query: 63  VDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD 121
            D   T  V TR YR+ EV++N   Y  + DIWSV C+  E+ TG  LF+   G  +   
Sbjct: 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK---GSDHL-- 232

Query: 122 EDHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN 176
            D L  I+++ G      + +  +QS   +  +      ++ +P L+  D          
Sbjct: 233 -DQLKEIMKVTGTPPAEFVQR--LQS-DEAKNY------MKGLPELEKKDFA----SILT 278

Query: 177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                A      L  ML  D + R TA + L HP+ +
Sbjct: 279 NASPLAV---NLLEKMLVLDAEQRVTAGEALAHPYFE 312

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 77.0 bits (190), Expect = 7e-17
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 22/154 (14%)

Query: 63  VDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD 121
            D   T  V TR YR+ EV+++   Y+ + DIWSV C+  E+ TG  LF+   G  Y   
Sbjct: 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK---GKDYL-- 230

Query: 122 EDHLAHIIELLGDIPKRIIQ--SGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
            D L  I+++ G      +Q  +   +  +      L   P  K +       + +    
Sbjct: 231 -DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS---LPQTPR-KDFT------QLFPRAS 279

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             A    + L  ML  D   R TAA  L HP+ +
Sbjct: 280 PQAA---DLLEKMLELDVDKRLTAAQALTHPFFE 310

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 76.5 bits (189), Expect = 7e-17
 Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 19/151 (12%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           K +  +V T  YR  ++L+ +  Y    D+W V C+ +E+ATG  LF    G T    E+
Sbjct: 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF---PGST---VEE 208

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I  +LG  P      G  S+E F              +     L+           
Sbjct: 209 QLHFIFRILG-TPTEETWPGILSNEEFKTY-------NYPKY-RAEALLSHAPRLDSDGA 259

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + L  +L ++ + R +A D ++HP+  +
Sbjct: 260 ---DLLTKLLQFEGRNRISAEDAMKHPFFLS 287

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 76.6 bits (189), Expect = 9e-17
 Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 18/159 (11%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
               T+ V TR YR+ E+L+ +  Y    D+WS+ C+  E+  G  +F    G +     
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP---GSSTM--- 237

Query: 123 DHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
           + L  II ++      D+    IQS   +        E   I      D+++        
Sbjct: 238 NQLERIIGVIDFPSNEDVES--IQS-PFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294

Query: 178 TPESARGFSE---FLRPMLAYDPKLRATAADCLQHPWLQ 213
               A    E    L  +L ++P  R +A D L+HP++ 
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 76.1 bits (188), Expect = 1e-16
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 15/151 (9%)

Query: 65  KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
             F+ +V T  YR+ +VL+ +  Y  S DIWS  C+  E+ TG  LF    G     DE+
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF---PGTN---DEE 216

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L  I +++G  P   +         +        I    P DL   +++ +   P    
Sbjct: 217 QLKLIFDIMG-TPNESLWPSVTKLPKYNPN-----IQQRPPRDL-RQVLQPHTKEPLDGN 269

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +FL  +L  +P +R +A   L HPW   
Sbjct: 270 LM-DFLHGLLQLNPDMRLSAKQALHHPWFAE 299

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 76.2 bits (188), Expect = 1e-16
 Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
            + +   V +R ++  E+L++   YD S D+WS+ CM   +      F    G       
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNY--- 238

Query: 123 DHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
           D L  I ++LG     D   +   +      F      L      K W      V   N 
Sbjct: 239 DQLVRIAKVLGTEDLYDYIDKY--NIELDPRF---NDILGRHSR-KRW---ERFVHSENQ 289

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
              S     +FL  +L YD + R TA + ++HP+  
Sbjct: 290 HLVSPEAL-DFLDKLLRYDHQSRLTAREAMEHPYFY 324

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 30/151 (19%)

Query: 68  TEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
              + +R YR+ E+++ A  Y  S D+WS+ C+  EL  G  LF   +G+T     D L 
Sbjct: 199 VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF---SGETSI---DQLV 252

Query: 127 HIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
            II+++G      + +  +   +    F          P LK  D   +L      TP  
Sbjct: 253 RIIQIMGTPTKEQMIR--MNPHYTEVRF----------PTLKAKDWRKILP---EGTPSL 297

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
           A    + L  +L Y+P LR    + + HP+ 
Sbjct: 298 AI---DLLEQILRYEPDLRINPYEAMAHPFF 325

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 63  VDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD 121
                T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  LF    G  +   
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHI-- 236

Query: 122 EDHLAHIIELLGDIPKRIIQ--SGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
            D L  I+ L+G     +++  S   +  +      ++ +  +   +        +    
Sbjct: 237 -DQLKLILRLVGTPGAELLKKISSESARNY------IQSLTQMPKMNFA----NVFIGAN 285

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             A    + L  ML  D   R TAA  L H +  
Sbjct: 286 PLAV---DLLEKMLVLDSDKRITAAQALAHAYFA 316

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 75.0 bits (185), Expect = 3e-16
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
                E V TR YR+ EV++ +  Y  + D+WS  C+  EL     +F    G  Y    
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYR--- 229

Query: 123 DHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
             L  I  ++G    D   R I+S  R+ E+      ++ +P      L     + +   
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIES-PRAREY------IKSLPMYPAAPLE----KMFPRV 278

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                   + L+ ML +DP  R TA + L+HP+LQ
Sbjct: 279 NPKGI---DLLQRMLVFDPAKRITAKEALEHPYLQ 310

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 74.2 bits (183), Expect = 5e-16
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 28/152 (18%)

Query: 68  TEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
           TE V TR YR+ E+++N+ GY  S DIWSV C+  E+ +   +F    G  Y    D L 
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLN 242

Query: 127 HIIELLG-----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
           HI+ +LG     D+    I +  ++  +      L  +P              +      
Sbjct: 243 HILGILGSPSQEDLNC--IIN-LKARNY------LLSLPHKNKVPWN----RLFPNADSK 289

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
           A    + L  ML ++P  R      L HP+L+
Sbjct: 290 AL---DLLDKMLTFNPHKRIEVEQALAHPYLE 318

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 72.1 bits (177), Expect = 3e-15
 Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 8/153 (5%)

Query: 66  HFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLF---EPHAGDTYTRD 121
                V T  YR+ E+L+ A  Y  + DIW++ C+  EL T + +F   +     +    
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250

Query: 122 EDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
            D L  I  ++G  P        +     +   +           L   + +        
Sbjct: 251 HDQLDRIFNVMG-FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 309

Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           A      L+ +L  DP  R T+   +Q P+   
Sbjct: 310 AF---HLLQKLLTMDPIKRITSEQAMQDPYFLE 339

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 69.5 bits (170), Expect = 3e-14
 Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 14/149 (9%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           V TR Y S E L    Y   +DIWS+     E+A G Y   P                  
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 250

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGE-----LRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
                  R            ++        L +I    P       +    ++ E    F
Sbjct: 251 AETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP-----PKLPSGVFSLE----F 301

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            +F+   L  +P  RA     + H +++ 
Sbjct: 302 QDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 68.3 bits (167), Expect = 9e-14
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 37/205 (18%)

Query: 36  TEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIW 94
            E+  ++   S      ++ T+ +   + +  T  V TR YR+ E+++    Y  + D+W
Sbjct: 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVW 268

Query: 95  SVACMAFELATGDY-----------LF--------------EPHAGDTYTRDEDHLAHII 129
           S+ C+  EL                LF                        + D L  I 
Sbjct: 269 SIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIF 328

Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFL 189
            +LG   +  I       E   K+   R+I      +    L E++  +   A      L
Sbjct: 329 NILGTPSEEDI-------EALEKEDAKRYIRIFPKREGTD-LAERFPASSADAI---HLL 377

Query: 190 RPMLAYDPKLRATAADCLQHPWLQN 214
           + ML ++P  R T  +CL HP+ + 
Sbjct: 378 KRMLVFNPNKRITINECLAHPFFKE 402

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 44/179 (24%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDY-----------LF- 110
            K  T  V TR YR+ E+++    Y  S DIWS  C+  EL                LF 
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264

Query: 111 ---------EPHAGDTYTRDE-DHLAHIIELLG-----DIPKRIIQSGHRSSEFFTKKGE 155
                    + ++   + +   D L  I  ++G     D+    I       ++      
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKN--INK-PEVIKY------ 315

Query: 156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           ++  P  KP +L     +KY    +        L  ML ++P  R T    L HP+L++
Sbjct: 316 IKLFPHRKPINLK----QKYPSISDDGI---NLLESMLKFNPNKRITIDQALDHPYLKD 367

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 64.7 bits (158), Expect = 1e-12
 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 51/140 (36%)

Query: 76  YRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGD 134
           + + EVL  N  +   ADI+++A      A  + L                 H I     
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP----------RNGDQWHEI----- 240

Query: 135 IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLA 194
                            ++G L  IP                 + E    F+E L+ M+ 
Sbjct: 241 -----------------RQGRLPRIPQ--------------VLSQE----FTELLKVMIH 265

Query: 195 YDPKLRATAADCLQHPWLQN 214
            DP+ R +A   ++H  L +
Sbjct: 266 PDPERRPSAMALVKHSVLLS 285

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 63.8 bits (155), Expect = 3e-12
 Identities = 34/147 (23%), Positives = 48/147 (32%), Gaps = 24/147 (16%)

Query: 80  EVL--INAGYDCSADIWSVACMAFELATG-----DY-----LFEPHAGDTYTRDEDHLAH 127
           EVL     GYD  +DI+SV   A ELA G     D      L E   G      +     
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264

Query: 128 IIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE 187
             EL     + +  SG   S   +            P            ++P     F  
Sbjct: 265 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP--------YHRTFSPH----FHH 312

Query: 188 FLRPMLAYDPKLRATAADCLQHPWLQN 214
           F+   L  +P  R +A+  L H + + 
Sbjct: 313 FVEQCLQRNPDARPSASTLLNHSFFKQ 339

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 45/133 (33%)

Query: 82  LINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQ 141
           +    YD S D+++      E+AT +Y   P++      +  + A I         R + 
Sbjct: 201 MYEEKYDESVDVYAFGMCMLEMATSEY---PYS------ECQNAAQIY--------RRVT 243

Query: 142 SGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA 201
           SG                   KP     V        PE      E +   +  +   R 
Sbjct: 244 SGV------------------KPASFDKVA------IPE----VKEIIEGCIRQNKDERY 275

Query: 202 TAADCLQHPWLQN 214
           +  D L H + Q 
Sbjct: 276 SIKDLLNHAFFQE 288

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 63.3 bits (154), Expect = 4e-12
 Identities = 23/146 (15%), Positives = 44/146 (30%), Gaps = 45/146 (30%)

Query: 69  EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHI 128
           E ++            +     +D+WS+ C+ + +  G   F              + + 
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------QQIINQ 273

Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
           I  L      II   H                           +E  +   +  +   + 
Sbjct: 274 ISKL----HAIIDPNHE--------------------------IEFPDIPEKDLQ---DV 300

Query: 189 LRPMLAYDPKLRATAADCLQHPWLQN 214
           L+  L  DPK R +  + L HP++Q 
Sbjct: 301 LKCCLKRDPKQRISIPELLAHPYVQI 326

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 62.8 bits (153), Expect = 5e-12
 Identities = 23/146 (15%), Positives = 44/146 (30%), Gaps = 45/146 (30%)

Query: 69  EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHI 128
           E ++            +     +D+WS+ C+ + +  G   F              + + 
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------QQIINQ 226

Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
           I  L      II   H                           +E  +   +  +   + 
Sbjct: 227 ISKL----HAIIDPNHE--------------------------IEFPDIPEKDLQ---DV 253

Query: 189 LRPMLAYDPKLRATAADCLQHPWLQN 214
           L+  L  DPK R +  + L HP++Q 
Sbjct: 254 LKCCLKRDPKQRISIPELLAHPYVQI 279

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 62.3 bits (152), Expect = 6e-12
 Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 50/141 (35%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
             +Y + E+L    Y  +AD++S+     E+A    L  PH G+ +         + +  
Sbjct: 219 DPRYMAPELL-QGSYGTAADVFSLGLTILEVACNMEL--PHGGEGW-------QQLRQ-- 266

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
           G +P     +   SSE                                        L  M
Sbjct: 267 GYLPPEF--TAGLSSE------------------------------------LRSVLVMM 288

Query: 193 LAYDPKLRATAADCLQHPWLQ 213
           L  DPKLRATA   L  P L+
Sbjct: 289 LEPDPKLRATAEALLALPVLR 309

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 62.3 bits (152), Expect = 6e-12
 Identities = 23/146 (15%), Positives = 44/146 (30%), Gaps = 45/146 (30%)

Query: 69  EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHI 128
           E ++            +     +D+WS+ C+ + +  G   F              + + 
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------QQIINQ 245

Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
           I  L      II   H                           +E  +   +  +   + 
Sbjct: 246 ISKL----HAIIDPNHE--------------------------IEFPDIPEKDLQ---DV 272

Query: 189 LRPMLAYDPKLRATAADCLQHPWLQN 214
           L+  L  DPK R +  + L HP++Q 
Sbjct: 273 LKCCLKRDPKQRISIPELLAHPYVQI 298

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 21/134 (15%), Positives = 35/134 (26%), Gaps = 45/134 (33%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV++    D   DIWS  CM   +  G     P                +        +I
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNGC---HPWT------QYFRGPLCL--------KI 268

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                   E          IP               +  P      ++ ++  L  +P  
Sbjct: 269 ASEPPPIRE----------IPP--------------SCAPL----TAQAIQEGLRKEPVH 300

Query: 200 RATAADCLQHPWLQ 213
           RA+A +  +     
Sbjct: 301 RASAMELRRKVGKA 314

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 45/135 (33%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+    Y    DIWS+  MA E+  G+    P+         ++           P R 
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYL-------NEN-----------PLRA 224

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                           L  I           L      +      F +FL   L  D + 
Sbjct: 225 ----------------LYLIATNGT----PELQNPEKLSAI----FRDFLNRCLEMDVEK 260

Query: 200 RATAADCLQHPWLQN 214
           R +A + LQH +L+ 
Sbjct: 261 RGSAKELLQHQFLKI 275

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 21/139 (15%), Positives = 39/139 (28%), Gaps = 47/139 (33%)

Query: 76  YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDI 135
           Y S E+  N  Y+  +DIW++ C+ +EL T  + F             +L   I      
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF-------EAGSMKNLVLKI------ 237

Query: 136 PKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAY 195
                             G    +        YS                   +  +   
Sbjct: 238 ----------------ISGSFPPVS-----LHYS-------------YDLRSLVSQLFKR 263

Query: 196 DPKLRATAADCLQHPWLQN 214
           +P+ R +    L+  ++  
Sbjct: 264 NPRDRPSVNSILEKGFIAK 282

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 61.3 bits (149), Expect = 2e-11
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            K   E + T  Y + EVL    YD   D+WS+  + F L  G   F         + + 
Sbjct: 192 QKKMKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPPF-------GGQTDQ 243

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            +   +                      +KG+         W   S          E A+
Sbjct: 244 EILRKV----------------------EKGKYTFDS--PEWKNVS----------EGAK 269

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + ++ ML +D + R +A   L+HPW++ 
Sbjct: 270 ---DLIKQMLQFDSQRRISAQQALEHPWIKE 297

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 30/135 (22%), Positives = 46/135 (34%), Gaps = 45/135 (33%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+  + Y    DIWS+  M  E+  G+    P+         D            P + 
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGE---PPYF-------SDS-----------PVQA 249

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                           ++ +    P      L   +  +P       +FL  ML  DP+ 
Sbjct: 250 ----------------MKRLRDSPP----PKLKNSHKVSPV----LRDFLERMLVRDPQE 285

Query: 200 RATAADCLQHPWLQN 214
           RATA + L HP+L  
Sbjct: 286 RATAQELLDHPFLLQ 300

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 60.9 bits (148), Expect = 3e-11
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 49/146 (33%)

Query: 73  TRQYRSLEVL---INAGYDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDHLAHI 128
           T  + + E+L          + DI+S  C+ + + +     F    G +  R        
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF----GKSLQRQ------- 237

Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
                             +        L     L P                 AR   E 
Sbjct: 238 ------------------ANILLGACSL---DCLHPEKHED----------VIAR---EL 263

Query: 189 LRPMLAYDPKLRATAADCLQHPWLQN 214
           +  M+A DP+ R +A   L+HP+  +
Sbjct: 264 IEKMIAMDPQKRPSAKHVLKHPFFWS 289

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 47/139 (33%)

Query: 76  YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDI 135
           Y S E +    Y+  +DIWS+ C+ +EL      F           +  LA  I      
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT-------AFSQKELAGKI------ 228

Query: 136 PKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAY 195
                           ++G+ R IP       YS                +E +  ML  
Sbjct: 229 ----------------REGKFRRIP-----YRYS-------------DELNEIITRMLNL 254

Query: 196 DPKLRATAADCLQHPWLQN 214
               R +  + L++P +  
Sbjct: 255 KDYHRPSVEEILENPLILE 273

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 21/140 (15%)

Query: 75  QYRSLEVLINAGYDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDHLAHIIELLG 133
           +   L       Y  + D+WS+    +  ATG  L F P  G    R+++ +  II    
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG-SLPFRPFEGPR--RNKEVMYKIITGKP 244

Query: 134 DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPML 193
                 +Q        ++          +      S  ++            +  L  +L
Sbjct: 245 SGAISGVQKAENGPIDWSGD--------MPVSCSLSRGLQVL---------LTPVLANIL 287

Query: 194 AYDPKLRATAADCLQHPWLQ 213
             D +               
Sbjct: 288 EADQEKCWGFDQFFAETSDI 307

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 37/151 (24%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           ++       T  Y + E+L   GYD S D+WS+  + + + +G     P      +    
Sbjct: 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG---QVPFQSHDRSLTCT 219

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
               I++         I+ G  S   F  +           W   S          + A+
Sbjct: 220 SAVEIMK--------KIKKGDFS---FEGE----------AWKNVS----------QEAK 248

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + ++ +L  DP  R   +    + WLQ+
Sbjct: 249 ---DLIQGLLTVDPNKRLKMSGLRYNEWLQD 276

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 60.1 bits (146), Expect = 5e-11
 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 45/135 (33%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+   GY+C ADIWS+   A E+A G     P+A       + H           P R 
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGK---PPYA-------DIH-----------PMRA 233

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                           +  IP   P        +   W+      F++F++  L   P+ 
Sbjct: 234 ----------------IFMIPTNPP----PTFRKPELWSDN----FTDFVKQCLVKSPEQ 269

Query: 200 RATAADCLQHPWLQN 214
           RATA   LQHP++++
Sbjct: 270 RATATQLLQHPFVRS 284

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 60.1 bits (146), Expect = 6e-11
 Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           D    + + T  Y + EVL    Y+   D+WS   + + L  G   F         +++ 
Sbjct: 202 DYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPF-------GGQNDQ 253

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            +   +                      +KG+         W   S          + A+
Sbjct: 254 DIIKKV----------------------EKGKYYFDF--NDWKNIS----------DEAK 279

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              E ++ ML YD   R TA + L   W++ 
Sbjct: 280 ---ELIKLMLTYDYNKRCTAEEALNSRWIKK 307

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 59.6 bits (145), Expect = 6e-11
 Identities = 27/149 (18%), Positives = 43/149 (28%), Gaps = 49/149 (32%)

Query: 70  DVQTRQYRSLEV----LINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
           D   + Y + E     L   GY   +DIWS+     ELA   +   P+            
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF---PYDSW--------- 216

Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF 185
               + L  + +                      P L              ++ E    F
Sbjct: 217 GTPFQQLKQVVE-------------------EPSPQLPA----------DKFSAE----F 243

Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            +F    L  + K R T  + +QHP+   
Sbjct: 244 VDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 59.7 bits (144), Expect = 8e-11
 Identities = 17/170 (10%), Positives = 36/170 (21%), Gaps = 50/170 (29%)

Query: 50  FLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVL--INAGYDCSADIWSVACMAFELATGD 107
            L D+        V            Y   E L    A +  + + W +    + +    
Sbjct: 234 MLGDVSA---LWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290

Query: 108 YLFE---PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKP 164
             F    P    ++ R    +     L       +                         
Sbjct: 291 LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPL------------------------- 325

Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                         P+  +     +   L +D + R    + ++ P    
Sbjct: 326 --------------PDFVK---TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            K   + + T  Y + EVL +  YD   D+WS   + + L +G   F          +E 
Sbjct: 182 SKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF-------NGANEY 233

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            +   +                      +KG+         W   S          ESA+
Sbjct: 234 DILKKV----------------------EKGKYTFEL--PQWKKVS----------ESAK 259

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + +R ML Y P +R +A D L H W+Q 
Sbjct: 260 ---DLIRKMLTYVPSMRISARDALDHEWIQT 287

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 34/148 (22%), Positives = 48/148 (32%), Gaps = 40/148 (27%)

Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
                 T  Y + EVL    YD S D+WS+  + + L  G   F P   +T       + 
Sbjct: 186 LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---FPPFYSNTGQAISPGM- 241

Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
                     KR I+ G      F              W   S          E A+   
Sbjct: 242 ----------KRRIRLGQYG---FPNP----------EWSEVS----------EDAK--- 265

Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
           + +R +L  DP  R T    + HPW+  
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQ 293

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            +       T ++ + EV          D+WSV  +++ L +G     P  G+    D++
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG---LSPFGGEN---DDE 363

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L ++     D                              +   S          E  +
Sbjct: 364 TLRNVKS--CDW------------NMDDS-----------AFSGIS----------EDGK 388

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+R +L  DP  R T    L+HPWL  
Sbjct: 389 ---DFIRKLLLADPNTRMTIHQALEHPWLTP 416

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 45/130 (34%)

Query: 85  AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGH 144
             YD  ADIWS+     E+A  +    PH        E +           P R+     
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIE---PPHH-------ELN-----------PMRV----- 230

Query: 145 RSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA 204
                      L  I    P      L+    W+ E    F +FL+  L  +P+ R +AA
Sbjct: 231 -----------LLKIAKSDP----PTLLTPSKWSVE----FRDFLKIALDKNPETRPSAA 271

Query: 205 DCLQHPWLQN 214
             L+HP++ +
Sbjct: 272 QLLEHPFVSS 281

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 44/139 (31%)

Query: 76  YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDI 135
           Y S E +   GY+  +DIWS+ C+ +E+A     F     + Y+     L   I      
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-----LCKKI------ 250

Query: 136 PKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAY 195
                           ++ +   +P     D YS                 + +   +  
Sbjct: 251 ----------------EQCDYPPLPS----DHYS-------------EELRQLVNMCINP 277

Query: 196 DPKLRATAADCLQHPWLQN 214
           DP+ R             +
Sbjct: 278 DPEKRPDVTYVYDVAKRMH 296

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 31/151 (20%), Positives = 50/151 (33%), Gaps = 46/151 (30%)

Query: 68  TEDVQTRQYRSLEVL----INAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           T D   R Y + E +       GYD  +D+WS+    +ELATG +   P+          
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF---PYP--------- 230

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
               + + L  + K                      P L          E+  ++P    
Sbjct: 231 KWNSVFDQLTQVVK-------------------GDPPQLSN-------SEEREFSPS--- 261

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            F  F+   L  D   R    + L+HP++  
Sbjct: 262 -FINFVNLCLTKDESKRPKYKELLKHPFILM 291

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 30/151 (19%), Positives = 46/151 (30%), Gaps = 40/151 (26%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
               T    T  Y + EVL    YD S D+WS+  + + L  G   + P   +       
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---YPPFYSNHGLAISP 273

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            +           K  I+ G      F              W   S          E  +
Sbjct: 274 GM-----------KTRIRMGQYE---FPNP----------EWSEVS----------EEVK 299

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                +R +L  +P  R T  + + HPW+  
Sbjct: 300 ---MLIRNLLKTEPTQRMTITEFMNHPWIMQ 327

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 57.8 bits (140), Expect = 3e-10
 Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 49/152 (32%)

Query: 68  TEDVQTRQYRSLEVL-----INAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
                   Y + E +         YD  AD+WS+     ELATG +   P+         
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF---PYKNCK----- 233

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
                  E+L  + +                      P L              ++ +  
Sbjct: 234 ----TDFEVLTKVLQ-------------------EEPPLLP---------GHMGFSGD-- 259

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             F  F++  L  D + R      L+H +++ 
Sbjct: 260 --FQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 47/134 (35%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           EV+  + YD  ADIWS+   A ELA G+    PH+       E H           P ++
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGE---PPHS-------ELH-----------PMKV 227

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                           L  IP   P  L      + N++        EF+   L  +P  
Sbjct: 228 ----------------LFLIPKNNPPTL------EGNYSKP----LKEFVEACLNKEPSF 261

Query: 200 RATAADCLQHPWLQ 213
           R TA + L+H ++ 
Sbjct: 262 RPTAKELLKHKFIL 275

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 57.8 bits (140), Expect = 3e-10
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           +    + + T  Y + EVL    YD   D+WS   + + L +G   F       Y ++E 
Sbjct: 177 NTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPF-------YGKNEY 228

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            +   +                      + G+         W   S          + A+
Sbjct: 229 DILKRV----------------------ETGKYAFDL--PQWRTIS----------DDAK 254

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + +R ML + P LR TA  CL+HPW+Q 
Sbjct: 255 ---DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 24/152 (15%), Positives = 44/152 (28%), Gaps = 47/152 (30%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
             + T  + T  Y + EVL   G Y+   D++S+  + FE+           G       
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP-----FSTGME----- 233

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
                 + +L  +                +   +   P     D                
Sbjct: 234 -----RVNILKKL----------------RSVSIEFPPDF--DDNKM------------- 257

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +   + +R ++ +DP  R  A   L   WL  
Sbjct: 258 KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
              F     T ++ + E++        AD+WS+  + + L +G     P  GDT    ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDT---KQE 224

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            LA++     +             EF  +            +   S            A+
Sbjct: 225 TLANVSA--VNY------------EFEDE-----------YFSNTS----------ALAK 249

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+R +L  DPK R T  D LQHPW++ 
Sbjct: 250 ---DFIRRLLVKDPKKRMTIQDSLQHPWIKP 277

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
              F     T ++ + E++        AD+WS+  + + L +G     P  G+T    ++
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGET---KQE 218

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L +I     +             +F  +            +   S          E A+
Sbjct: 219 TLTNI--SAVNY------------DFDEE-----------YFSNTS----------ELAK 243

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+R +L  DPK R T A  L+H W++ 
Sbjct: 244 ---DFIRRLLVKDPKRRMTIAQSLEHSWIKA 271

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 56.6 bits (137), Expect = 6e-10
 Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           D+       T ++ + E++         D+W++  + + L +G     P AG+    D +
Sbjct: 204 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG---LSPFAGED---DLE 257

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L ++     D             EF               +   S            A+
Sbjct: 258 TLQNVKR--CDW------------EFDED-----------AFSSVS----------PEAK 282

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F++ +L  +P+ R T  D L+HPWL+ 
Sbjct: 283 ---DFIKNLLQKEPRKRLTVHDALEHPWLKG 310

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 56.5 bits (137), Expect = 7e-10
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
              F     T ++ + E++        AD+WS+  + + L +G     P  GDT    ++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDT---KQE 225

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            LA+I                   +F  +            +   S          E A+
Sbjct: 226 TLANITS--VSY------------DFDEE-----------FFSHTS----------ELAK 250

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+R +L  + + R T  + L+HPW+  
Sbjct: 251 ---DFIRKLLVKETRKRLTIQEALRHPWITP 278

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 56.5 bits (137), Expect = 8e-10
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
             +F       +Y + EV  +     + D+WS+  + + L +G     P   +T   ++ 
Sbjct: 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG---INPFLAET---NQQ 210

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            + +I  +  +              F  +            +   S            A 
Sbjct: 211 IIENI--MNAEY------------TFDEE-----------AFKEIS----------IEAM 235

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+  +L  + K R TA++ LQHPWL+ 
Sbjct: 236 ---DFVDRLLVKERKSRMTASEALQHPWLKQ 263

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 56.0 bits (136), Expect = 1e-09
 Identities = 36/151 (23%), Positives = 50/151 (33%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           +   +    T  Y + EVL    Y  + D WS+  + + L  G   + P   +T    E 
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG---YPPFYEET----ES 213

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L   I   G              EF          P    WD  S          ESA+
Sbjct: 214 KLFEKI-KEGYY------------EF--------ESP---FWDDIS----------ESAK 239

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+  +L  DP  R T    L HPW+  
Sbjct: 240 ---DFICHLLEKDPNERYTCEKALSHPWIDG 267

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 32/151 (21%), Positives = 49/151 (32%), Gaps = 43/151 (28%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
                    T  Y + E+L    Y    D+WSV  + + L  G   FEP   +     + 
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG---FEPFYDER---GDQ 257

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            +   I L  +              F +             WD  S           +A+
Sbjct: 258 FMFRRI-LNCEY------------YFISP-----------WWDEVS----------LNAK 283

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + +R ++  DPK R T    LQHPW+  
Sbjct: 284 ---DLVRKLIVLDPKKRLTTFQALQHPWVTG 311

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 47/154 (30%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           +        T  + + EVL   GYD + DIWS+  + + + TG   + P A         
Sbjct: 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG---YTPFANGP------ 224

Query: 124 HLAHIIELLGDIPKRI---IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
                     D P+ I   I SG  S    +             W+  S          +
Sbjct: 225 ---------DDTPEEILARIGSGKFS---LSGG----------YWNSVS----------D 252

Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +A+   + +  ML  DP  R TAA  L+HPW+ +
Sbjct: 253 TAK---DLVSKMLHVDPHQRLTAALVLRHPWIVH 283

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 49/147 (33%)

Query: 68  TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAH 127
           T  V T+ Y S E +    Y    DI+S+  + FEL    Y F        T+ E     
Sbjct: 234 TGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFS-------TQME----- 278

Query: 128 IIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE 187
            + ++ D+                +  +   +   K                        
Sbjct: 279 RVRIITDV----------------RNLKFPLLFTQKYPQE------------------HM 304

Query: 188 FLRPMLAYDPKLRATAADCLQHPWLQN 214
            ++ ML+  P  R  A D +++   +N
Sbjct: 305 MVQDMLSPSPTERPEATDIIENAIFEN 331

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
              F     T ++ + E++        AD+WS+  + + L +G     P  GDT    ++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDT---KQE 225

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            LA+I                   +F  +            +   S          E A+
Sbjct: 226 TLANITA--VSY------------DFDEE-----------FFSQTS----------ELAK 250

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+R +L  + + R T  + L+HPW+  
Sbjct: 251 ---DFIRKLLVKETRKRLTIQEALRHPWITP 278

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 54.7 bits (132), Expect = 3e-09
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 46/130 (35%)

Query: 85  AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGH 144
           A YD  +D+WS+   A E+A G     P              H +  L  IP+       
Sbjct: 209 ATYDFKSDLWSLGITAIEMAEGAP---PLCD----------MHPMRALFLIPRN------ 249

Query: 145 RSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA 204
                          P LK             W+ +    F  F+   L  +   R    
Sbjct: 250 -------------PAPRLKS----------KKWSKK----FQSFIESCLVKNHSQRPATE 282

Query: 205 DCLQHPWLQN 214
             ++HP++++
Sbjct: 283 QLMKHPFIRD 292

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 54.7 bits (132), Expect = 3e-09
 Identities = 22/130 (16%), Positives = 35/130 (26%), Gaps = 46/130 (35%)

Query: 85  AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGH 144
             YD   D+WS+     ELA       P           +                    
Sbjct: 228 GQYDGKVDVWSLGITCIELAERK---PPLF-------NMN-----------AMSA----- 261

Query: 145 RSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA 204
                      L HI   +   L     +  +W+      F  F+   L   P+ R T+ 
Sbjct: 262 -----------LYHIAQNESPAL-----QSGHWSEY----FRNFVDSCLQKIPQDRPTSE 301

Query: 205 DCLQHPWLQN 214
             L+H ++  
Sbjct: 302 VLLKHRFVLR 311

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 52/142 (36%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
           T +Y S E + +  Y    D++++  +  EL          A +T            +  
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHV----CDTAFETS-----------KFF 228

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
            D+   II                         D++              +     L+ +
Sbjct: 229 TDLRDGIIS------------------------DIFD-------------KKEKTLLQKL 251

Query: 193 LAYDPKLRATAADCLQHPWLQN 214
           L+  P+ R   ++ L+   +  
Sbjct: 252 LSKKPEDRPNTSEILRTLTVWK 273

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 54.5 bits (131), Expect = 4e-09
 Identities = 26/137 (18%), Positives = 37/137 (27%), Gaps = 46/137 (33%)

Query: 80  EVL--INAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPK 137
           EVL   N  Y    D WS   +   L  G   F    G                  D   
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP---GVNDA--------------DTIS 286

Query: 138 RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDP 197
           ++               +L        +++ S            AR   + L  +L  + 
Sbjct: 287 QV------------LNKKLC-FEN-PNYNVLS----------PLAR---DLLSNLLNRNV 319

Query: 198 KLRATAADCLQHPWLQN 214
             R  A   LQHPW+  
Sbjct: 320 DERFDAMRALQHPWISQ 336

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 53.8 bits (130), Expect = 5e-09
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 34/140 (24%)

Query: 80  EVL-----INAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGD 134
           EV+       + YD   D+WS+  + + L +G   + P  G   +              +
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG---YPPFVGRCGSDCGWDRGEACPACQN 247

Query: 135 IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLA 194
           +    IQ G      F  K           W   S           +A+   + +  +L 
Sbjct: 248 MLFESIQEGKYE---FPDK----------DWAHIS----------CAAK---DLISKLLV 281

Query: 195 YDPKLRATAADCLQHPWLQN 214
            D K R +AA  LQHPW+Q 
Sbjct: 282 RDAKQRLSAAQVLQHPWVQG 301

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 30/151 (19%), Positives = 46/151 (30%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            + +     T  Y S EVL    Y    DIW+   + + L  G   + P   +       
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG---YPPFWDED------ 211

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
                  L        I++G      +              WD  +            A+
Sbjct: 212 ----QHRLY-----AQIKAGAYD---YPSP----------EWDTVT----------PEAK 239

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                +  ML  +PK R TA   L+ PW+ N
Sbjct: 240 ---SLIDSMLTVNPKKRITADQALKVPWICN 267

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 53.9 bits (130), Expect = 6e-09
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 39/136 (28%)

Query: 80  EVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKR 138
           EV+    GYD  ADIWS    A ELATG     P+           +    ++L    + 
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGA---APYH------KYPPM----KVLMLTLQ- 241

Query: 139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK 198
                                P L+       +++K  +       F + +   L  DP+
Sbjct: 242 ------------------NDPPSLETGVQDKEMLKK--YGKS----FRKMISLCLQKDPE 277

Query: 199 LRATAADCLQHPWLQN 214
            R TAA+ L+H + Q 
Sbjct: 278 KRPTAAELLRHKFFQK 293

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 53.5 bits (129), Expect = 8e-09
 Identities = 31/151 (20%), Positives = 46/151 (30%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            + +     T  Y S EVL    Y    DIW+   + + L  G   + P   +     + 
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG---YPPFWDED----QH 236

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L   I                      K G   +      WD  +            A+
Sbjct: 237 RLYAQI----------------------KAGAYDYPS--PEWDTVT----------PEAK 262

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                +  ML  +PK R TA   L+ PW+ N
Sbjct: 263 ---SLIDSMLTVNPKKRITADQALKVPWICN 290

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 53.5 bits (129), Expect = 8e-09
 Identities = 33/151 (21%), Positives = 47/151 (31%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
                  V T  + + EV+    Y    D+W    + F L +G     P           
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG---CLP------FYGTK 237

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
                  L   I                 KG+ +  P  + W   S          ESA+
Sbjct: 238 E-----RLFEGI----------------IKGKYKMNP--RQWSHIS----------ESAK 264

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + +R ML  DP  R T  + L HPWL+ 
Sbjct: 265 ---DLVRRMLMLDPAERITVYEALNHPWLKE 292

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 33/151 (21%), Positives = 47/151 (31%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            K     V T  Y S +VL    Y    D WS   M + L  G   + P +  T      
Sbjct: 162 GKMMRTKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCG---YPPFSAPT------ 211

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
                 E++       I+ G  +   F +K           W   S            A 
Sbjct: 212 ----DSEVM-----LKIREGTFT---FPEK----------DWLNVS----------PQAE 239

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                +R +L   PK R T+   L+H W + 
Sbjct: 240 ---SLIRRLLTKSPKQRITSLQALEHEWFEK 267

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 30/151 (19%), Positives = 44/151 (29%), Gaps = 46/151 (30%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           D+H T    T  Y + EV          DIWS   + + L TG     P  G +      
Sbjct: 180 DEHSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTG---CLPFTGTS------ 229

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
               + E+                       E  +          +            A 
Sbjct: 230 ----LEEVQQKA----------------TYKEPNYAV---ECRPLT----------PQAV 256

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + L+ ML  DP+ R +AA  L H W + 
Sbjct: 257 ---DLLKQMLTKDPERRPSAAQVLHHEWFKQ 284

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
                E + T +Y + E+L       + D+W++  +A+ L T      P  G+    +++
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH---TSPFVGED---NQE 240

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
              +I     ++            ++  +            +   S          + A 
Sbjct: 241 TYLNI--SQVNV------------DYSEE-----------TFSSVS----------QLAT 265

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F++ +L  +P+ R TA  CL H WLQ 
Sbjct: 266 ---DFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 46/138 (33%)

Query: 80  EVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIP 136
           EVL++   AGY+ + D WS+  + F   +G   + P +     R +  L   I       
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSG---YPPFSEH---RTQVSLKDQI------- 357

Query: 137 KRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYD 196
                            G+   IP  + W   S          E A    + ++ +L  D
Sbjct: 358 ---------------TSGKYNFIP--EVWAEVS----------EKAL---DLVKKLLVVD 387

Query: 197 PKLRATAADCLQHPWLQN 214
           PK R T  + L+HPWLQ+
Sbjct: 388 PKARFTTEEALRHPWLQD 405

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 26/142 (18%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
           T QY + E+L    Y  + D WS   +AFE  TG   F P   +            +   
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG---FRPFLPNW---QPVQWHGKVRE- 238

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD-LYSVLVEKYNWTPESARGFSEFLRP 191
                   +S      +    G ++    L   + L  +L  K             +L+ 
Sbjct: 239 --------KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGK----------LERWLQC 280

Query: 192 MLAYDPKLRATAADCLQHPWLQ 213
           ML +  + R T          Q
Sbjct: 281 MLMWHQRQRGTDPQNPNVGCFQ 302

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 41/135 (30%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
           E      YD S D+WS+  + + L  G   + P   +        +   I  +G      
Sbjct: 169 ETT-GEKYDKSCDMWSLGVIMYILLCG---YPPFYSNHGLAISPGMKTRI-RMGQY---- 219

Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
                   EF          P    W   S          E  +     +R +L  +P  
Sbjct: 220 --------EF----------PN-PEWSEVS----------EEVK---MLIRNLLKTEPTQ 247

Query: 200 RATAADCLQHPWLQN 214
           R T  + + HPW+  
Sbjct: 248 RMTITEFMNHPWIMQ 262

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 27/150 (18%), Positives = 46/150 (30%), Gaps = 51/150 (34%)

Query: 73  TRQYRSLEVLINA-------GYDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDH 124
           T  +R+ E+L  +           S DI+S+ C+ + + +     F    GD Y+R+ + 
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF----GDKYSRESN- 249

Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
                          I  G  S +                                 A  
Sbjct: 250 ---------------IIRGIFSLDEMKCL----------HDRSLI----------AEAT- 273

Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             + +  M+ +DP  R TA   L+HP    
Sbjct: 274 --DLISQMIDHDPLKRPTAMKVLRHPLFWP 301

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 45/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           +    + + T  Y + EVL    YD   D+WS   + + L +G     P  G        
Sbjct: 177 NTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG---TPPFYGKNEY---- 228

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
                 ++L     + +++G  +   F              W   S          + A+
Sbjct: 229 ------DIL-----KRVETGKYA---FDLP----------QWRTIS----------DDAK 254

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              + +R ML + P LR TA  CL+HPW+Q 
Sbjct: 255 ---DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 46/152 (30%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            + +     T  Y S EVL    Y    D+W+   + + L  G   + P     +  D+ 
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG---YPP----FWDEDQH 219

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELR-HIPGLKPWDLYSVLVEKYNWTPESA 182
            L   I                      K G      P    WD  +            A
Sbjct: 220 RLYQQI----------------------KAGAYDFPSP---EWDTVT----------PEA 244

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           +   + +  ML  +P  R TAA+ L+HPW+ +
Sbjct: 245 K---DLINKMLTINPSKRITAAEALKHPWISH 273

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
            +    +  T ++ + EV+         D+WSV  +A+ L +G     P  GD    D +
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG---LSPFLGDN---DAE 295

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L +I+                  +   +            +   S          E A+
Sbjct: 296 TLNNILA--CRW------------DLEDE-----------EFQDIS----------EEAK 320

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              EF+  +L  +   R +A++ L+HPWL +
Sbjct: 321 ---EFISKLLIKEKSWRISASEALKHPWLSD 348

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 29/136 (21%), Positives = 40/136 (29%), Gaps = 50/136 (36%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFE-PHAGDTYTRDEDHLAHIIELLGDIPKR 138
           EVL   G+    D+WS+ C+ + L  G   FE     +TY                   R
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY------------------LR 226

Query: 139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK 198
           I            KK E   IP                     A      ++ ML  DP 
Sbjct: 227 I------------KKNEYS-IP---------------KHINPVAA---SLIQKMLQTDPT 255

Query: 199 LRATAADCLQHPWLQN 214
            R T  + L   +  +
Sbjct: 256 ARPTINELLNDEFFTS 271

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 50.8 bits (122), Expect = 6e-08
 Identities = 29/136 (21%), Positives = 39/136 (28%), Gaps = 52/136 (38%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYL-FE-PHAGDTYTRDEDHLAHIIELLGDIPK 137
           EVL   G+    D+WS+ C+ + L  G    FE     +TY                   
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVG-KPPFETSCLKETY------------------L 251

Query: 138 RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDP 197
           RI            KK E   IP                     A      ++ ML  DP
Sbjct: 252 RI------------KKNEYS-IP---------------KHINPVAA---SLIQKMLQTDP 280

Query: 198 KLRATAADCLQHPWLQ 213
             R T  + L   +  
Sbjct: 281 TARPTINELLNDEFFT 296

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 50.8 bits (122), Expect = 6e-08
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 49/147 (33%)

Query: 68  TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAH 127
           T  V T+ Y S E +    Y    DI+S+  + FEL      F        T+ E     
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP---FS-------TQME----- 232

Query: 128 IIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE 187
            +  L D+                +  +   +   K                        
Sbjct: 233 RVRTLTDV----------------RNLKFPPLFTQKYPCE------------------YV 258

Query: 188 FLRPMLAYDPKLRATAADCLQHPWLQN 214
            ++ ML+  P  R  A + +++   ++
Sbjct: 259 MVQDMLSPSPMERPEAINIIENAVFED 285

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 50/140 (35%)

Query: 76  YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE-PHAGDTYTRDEDHLAHIIELLGD 134
           Y   E++    +D   D+WS+  + +E   G   FE     +TY                
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY---------------- 216

Query: 135 IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLA 194
             KRI             + E    P               ++  E AR   + +  +L 
Sbjct: 217 --KRI------------SRVEFT-FP---------------DFVTEGAR---DLISRLLK 243

Query: 195 YDPKLRATAADCLQHPWLQN 214
           ++P  R    + L+HPW+  
Sbjct: 244 HNPSQRPMLREVLEHPWITA 263

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 21/141 (14%)

Query: 75  QYRSLEVLINAGYDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDHLAHIIELLG 133
           +   L       Y  + D+WS+    +  ATG  L F P  G    R+++ +  II    
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG-SLPFRPFEGP--RRNKEVMYKII---- 240

Query: 134 DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPML 193
                   SG  S     + G +     +      S  ++            +  L  +L
Sbjct: 241 ----TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL---------LTPVLANIL 287

Query: 194 AYDPKLRATAADCLQHPWLQN 214
             D +                
Sbjct: 288 EADQEKCWGFDQFFAETSDIL 308

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 50/157 (31%)

Query: 64  DKHFTEDVQTRQYRSLEVL------INAGYDCSADIWSVACMAFELATGDYLFEPHAGDT 117
            +   E   T  Y + E++       + GY    D+WS   + + L  G     P     
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG---SPPFWHRK 233

Query: 118 YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
               +  +  +I                        G  +       WD YS        
Sbjct: 234 ----QMLMLRMI----------------------MSGNYQFGS--PEWDDYS-------- 257

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             ++ +   + +   L   P+ R TA + L HP+ Q 
Sbjct: 258 --DTVK---DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 46/138 (33%)

Query: 80  EVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIP 136
           EVL++   AGY+ + D WS+  + F   +G   + P +     R +  L   I       
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSG---YPPFSEH---RTQVSLKDQI------- 232

Query: 137 KRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYD 196
                            G+   IP  + W   S          E A    + ++ +L  D
Sbjct: 233 ---------------TSGKYNFIP--EVWAEVS----------EKAL---DLVKKLLVVD 262

Query: 197 PKLRATAADCLQHPWLQN 214
           PK R T  + L+HPWLQ+
Sbjct: 263 PKARFTTEEALRHPWLQD 280

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 50/135 (37%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYLFE-PHAGDTYTRDEDHLAHIIELLGDIPKR 138
           E++    +D   D+W    + +E   G   F+ P   +T+                  +R
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH------------------RR 223

Query: 139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK 198
           I               +L+  P                +  + ++   + +  +L Y P 
Sbjct: 224 I------------VNVDLK-FP---------------PFLSDGSK---DLISKLLRYHPP 252

Query: 199 LRATAADCLQHPWLQ 213
            R      ++HPW++
Sbjct: 253 QRLPLKGVMEHPWVK 267

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 32/156 (20%), Positives = 50/156 (32%), Gaps = 50/156 (32%)

Query: 64  DKHFTEDVQTRQYRSLEVL------INAGYDCSADIWSVACMAFELATGDYLFEPHAGDT 117
            +   E   T  Y + E+L       + GY    D+W+   + F L  G     P     
Sbjct: 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG---SPPFWHRR 309

Query: 118 YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW 177
                      I +L     R+I  G      F+             WD  S        
Sbjct: 310 ----------QILML-----RMIMEGQYQ---FSSP----------EWDDRS-------- 333

Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
              + +   + +  +L  DP+ R TA   LQHP+ +
Sbjct: 334 --STVK---DLISRLLQVDPEARLTAEQALQHPFFE 364

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 50/136 (36%)

Query: 80  EVLINAGYDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDHLAHIIELLGDIPKR 138
           E+   + +   +D+WS+ CM + L  G    F+          +     +   L     +
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIG-RPPFD---------TDT----VKNTL----NK 223

Query: 139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK 198
           +               +   +P               ++    A+   + +  +L  +P 
Sbjct: 224 V------------VLADYE-MP---------------SFLSIEAK---DLIHQLLRRNPA 252

Query: 199 LRATAADCLQHPWLQN 214
            R + +  L HP++  
Sbjct: 253 DRLSLSSVLDHPFMSR 268

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.4 bits (115), Expect = 5e-07
 Identities = 12/56 (21%), Positives = 25/56 (44%)

Query: 67  FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           FT   +T  ++ +E+L N  ++   D + VA   + +  G Y+   + G     + 
Sbjct: 242 FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEG 297

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 18/146 (12%), Positives = 30/146 (20%), Gaps = 52/146 (35%)

Query: 69  EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHI 128
           E    R   S           S D W++  + + +   D              +D     
Sbjct: 272 ELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI----------TKDAALGG 321

Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
            E +    K I                                       P+  R     
Sbjct: 322 SEWIFRSCKNI---------------------------------------PQPVR---AL 339

Query: 189 LRPMLAYDPKLRATAADCLQHPWLQN 214
           L   L Y  + R      ++ P  + 
Sbjct: 340 LEGFLRYPKEDRLLPLQAMETPEYEQ 365

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 47.7 bits (114), Expect = 8e-07
 Identities = 24/146 (16%), Positives = 40/146 (27%), Gaps = 49/146 (33%)

Query: 73  TRQYRSLEVLINAGY---DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  YR+ E+     +   D   D+WS+ C+ + +  G+  ++                  
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF--------------- 250

Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFL 189
              GD     +Q+                IP       +S                 + L
Sbjct: 251 -QKGDSVALAVQNQLS-------------IP---QSPRHS-------------SALWQLL 280

Query: 190 RPMLAYDPKLRATAADCLQHPW-LQN 214
             M+  DP  R      L     LQ 
Sbjct: 281 NSMMTVDPHQRPHIPLLLSQLEALQP 306

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 38/141 (26%)

Query: 80  EVLINAG--YDCSADIWSVACMAFELATGDYL-FEPHAGDTYTRDEDHLAHIIELLGDIP 136
           E   N         DIWS+    + +     + F           +     ++EL     
Sbjct: 220 EFFSNESSYNGAKVDIWSLGICLYVMFYN-VVPFS---------LKIS---LVELF---- 262

Query: 137 KRIIQSGHRSSEFFTKKGELR---HIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPML 193
             I            +   +                      N+         +FL+  L
Sbjct: 263 NNI------------RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI---DFLKLFL 307

Query: 194 AYDPKLRATAADCLQHPWLQN 214
             +P  R T+ D L+H WL +
Sbjct: 308 RKNPAERITSEDALKHEWLAD 328

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 53/142 (37%)

Query: 73  TRQYRS---LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
           T  YR+   +++  N       DIW++ C+ + L    + FE         D   L    
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE---------DGAKLR--- 260

Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFL 189
                     I +G  S            IP   P D                  F   +
Sbjct: 261 ----------IVNGKYS------------IP---PHDTQY-------------TVFHSLI 282

Query: 190 RPMLAYDPKLRATAADCLQHPW 211
           R ML  +P+ R + A+ +    
Sbjct: 283 RAMLQVNPEERLSIAEVVHQLQ 304

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 27/139 (19%), Positives = 37/139 (26%), Gaps = 65/139 (46%)

Query: 86  GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHR 145
           GY  +ADIWS+ C                             IIE+          +G  
Sbjct: 201 GYGKAADIWSLGCT----------------------------IIEMA---------TGKP 223

Query: 146 SSEFFTKKGELRHIPGLKPW-DLYSVL-----VEKYNWTPESARGFSE----FLRPMLAY 195
                             P+ +L         V  +   PE     S     F+      
Sbjct: 224 ------------------PFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEP 265

Query: 196 DPKLRATAADCLQHPWLQN 214
           DP  RA A D L   +L+ 
Sbjct: 266 DPDKRACANDLLVDEFLKV 284

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 23/135 (17%), Positives = 33/135 (24%), Gaps = 43/135 (31%)

Query: 80  EVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKR 138
           EVL+   YD   AD+WS     + +  G Y FE         D               +R
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE---------DP----EEPRDYRKTIQR 233

Query: 139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPK 198
           I               +   IP                            +  +   DP 
Sbjct: 234 I------------LSVKYS-IP-------------DDIRISPECC---HLISRIFVADPA 264

Query: 199 LRATAADCLQHPWLQ 213
            R +  +   H W  
Sbjct: 265 TRISIPEIKTHSWFL 279

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 13/152 (8%), Positives = 28/152 (18%), Gaps = 57/152 (37%)

Query: 68  TEDVQTRQYRSLEVLINAG-----YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
                  +  +  +L            + D W++    + +   D    P+  D      
Sbjct: 270 GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL---PNTDDA----- 321

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
                                                           +       P+  
Sbjct: 322 -----------------------------------------ALGGSEWIFRSCKNIPQPV 340

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
           R     L   L Y  + R      ++ P  + 
Sbjct: 341 R---ALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 25/52 (48%)

Query: 152 KKGELRHIPG-LKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT 202
           +K  L+ +   LK   LY+          +SA        P LA    ++AT
Sbjct: 18  EKQALKKLQASLK---LYA---------DDSA--------PALA----IKAT 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.98
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.98
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.98
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.98
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.98
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.98
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.95
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
3bhy_A	283	Death-associated protein kinase 3; death associate	99.95
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.95
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.95
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.95
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.94
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.94
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.94
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.93
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.93
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.93
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.93
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.93
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.93
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.93
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.93
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.92
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.92
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.92
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.91
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.91
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.91
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.91
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.91
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.91
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.91
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.91
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.91
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.91
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.91
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.91
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.91
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.91
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.91
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.9
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.9
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.9
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.9
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.9
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.9
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.89
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.89
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.88
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.86
3uqc_A	286	Probable conserved transmembrane protein; structur	99.69
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.65
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.22
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.51
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.63
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.87
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	95.86
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	93.49
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	89.74
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	88.78
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	85.04
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	83.61
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	83.52
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	81.28
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	80.94
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	80.8
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	80.68
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	80.47
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	80.2
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	80.02

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-39  Score=258.80  Aligned_cols=195  Identities=24%  Similarity=0.350  Sum_probs=145.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-------CCCCCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------HFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------~~~~~~   71 (214)
                      +|++++...+.+...+++..++  +..  .+|.++++|||+||+||+++.++.+||+|||+|+....       .....+
T Consensus       144 ~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~  223 (398)
T 4b99_A          144 DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV  223 (398)
T ss_dssp             EHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSC
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccce
Confidence            5777888888888887765333  222  37788889999999999999999999999999986632       344569


Q ss_pred             cCCcccchHHHhcCC-CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         72 QTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        72 ~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      ||+.|||||++.+.. |+.++||||+||+++||++|.+||.+.+      ..+++..|....|.++............. 
T Consensus       224 GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~------~~~~l~~I~~~~g~p~~~~~~~~~~~~~~-  296 (398)
T 4b99_A          224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN------YVHQLQLIMMVLGTPSPAVIQAVGAERVR-  296 (398)
T ss_dssp             CCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS------HHHHHHHHHHHHCCCCGGGTC-----CHH-
T ss_pred             eChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhhhhhhhh-
Confidence            999999999999864 7999999999999999999999998765      78999999999999887654322111100 


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                         ......+...+..+...       .+..+.+++|||.+||++||++|+||+|+|+||||++
T Consensus       297 ---~~~~~~~~~~~~~~~~~-------~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  350 (398)
T 4b99_A          297 ---AYIQSLPPRQPVPWETV-------YPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK  350 (398)
T ss_dssp             ---HHHHSSCCCCCCCHHHH-------STTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred             ---hhhhcCCCcCCCCHHHh-------CCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence               00011122222222111       1234567899999999999999999999999999974

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.2e-39  Score=254.55  Aligned_cols=166  Identities=19%  Similarity=0.274  Sum_probs=128.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|++++. ..++.+.+++..+.  +..  .+|.++++|||+||+|||++.+|.+||+|||+|+....   .....+||+.
T Consensus       157 ~L~~~l~-~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~  235 (346)
T 4fih_A          157 ALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY  235 (346)
T ss_dssp             EHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGG
T ss_pred             cHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcC
Confidence            4666554 45677777654322  222  37778889999999999999999999999999987743   3456799999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |||||++.+.+|+.++||||+||++|||++|.+||.+.+      ..+.+..+....  ++.                  
T Consensus       236 YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~--~~~------------------  289 (346)
T 4fih_A          236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDNL--PPR------------------  289 (346)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSS--CCC------------------
T ss_pred             cCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCC--CCC------------------
Confidence            999999999999999999999999999999999998644      455554443311  000                  


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                         .......++++.+||.+||+.||++|||++|+|+||||++
T Consensus       290 -------------------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          290 -------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             -------------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             -------------------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence                               0012345567899999999999999999999999999963

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=8.8e-40  Score=251.83  Aligned_cols=164  Identities=19%  Similarity=0.303  Sum_probs=131.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~   73 (214)
                      ||++++.+.+.+.+.+++..+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|+....     .....+||
T Consensus       118 ~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GT  197 (311)
T 4aw0_A          118 ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT  197 (311)
T ss_dssp             EHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSC
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccC
Confidence            6888888888888887755322  222  37778889999999999999999999999999987642     23456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+.+|+.++||||+||++|+|++|.+||.+.+      ..+.+.++.+.  .                   
T Consensus       198 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~--~-------------------  250 (311)
T 4aw0_A          198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKIIKL--E-------------------  250 (311)
T ss_dssp             GGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHT--C-------------------
T ss_pred             cccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcC--C-------------------
Confidence            99999999999999999999999999999999999997544      44444544431  1                   


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHH------HhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAAD------CLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e------~l~hp~f~~  214 (214)
                                           +..+...++++++||.+||+.||++|+|++|      +++||||++
T Consensus       251 ---------------------~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~  296 (311)
T 4aw0_A          251 ---------------------YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  296 (311)
T ss_dssp             ---------------------CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             ---------------------CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence                                 1123344567889999999999999999988      589999974

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.2e-39  Score=255.03  Aligned_cols=202  Identities=19%  Similarity=0.252  Sum_probs=132.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCC-cceEEeecCCceeccCC-----------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVDKH-----------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~~~-----------   66 (214)
                      +|++++   +++.+.+++..+.  +..  .+|.++++|||+||+||+++.+ +.+||+|||+|+.....           
T Consensus       106 ~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~  182 (361)
T 4f9c_A          106 SFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE  182 (361)
T ss_dssp             CHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC---
T ss_pred             cHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccc
Confidence            455555   2455555544222  222  3777888999999999999776 89999999999755321           


Q ss_pred             --------------------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHH
Q psy16751         67 --------------------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL  125 (214)
Q Consensus        67 --------------------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~  125 (214)
                                          ....+||+.|+|||++.+. .|+.++||||+||++++|++|+.||.+.+.     +.+++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~-----~~~~l  257 (361)
T 4f9c_A          183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD-----DLTAL  257 (361)
T ss_dssp             -----------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS-----HHHHH
T ss_pred             ccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC-----HHHHH
Confidence                                2345899999999999987 489999999999999999999999875432     78999


Q ss_pred             HHHHHHhCCCChHHhhccCCccccccccCcc--------------ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHH
Q psy16751        126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------------RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRP  191 (214)
Q Consensus       126 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  191 (214)
                      ..+...+|.++....................              ...+.... . ..............+++++|||.+
T Consensus       258 ~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~-~-~~~~~~~~~~~~~is~~a~DLl~~  335 (361)
T 4f9c_A          258 AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTS-D-IQGHATNLEGWNEVPDEAYDLLDK  335 (361)
T ss_dssp             HHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC------------------------CTTCCHHHHHHHHH
T ss_pred             HHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccc-c-cccccccccccccCCHHHHHHHHH
Confidence            9999999875443332221111110000000              00000000 0 000000011223456788999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q psy16751        192 MLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       192 ~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ||++||++|+||+|||+||||++
T Consensus       336 lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          336 LLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             HTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HCcCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.8e-39  Score=248.82  Aligned_cols=164  Identities=17%  Similarity=0.170  Sum_probs=131.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.+...+.+.+++..+.  +.  ..+|.++++|||+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus       112 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~  191 (304)
T 3ubd_A          112 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE  191 (304)
T ss_dssp             EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGG
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcc
Confidence            6888888888888887755322  22  23777888999999999999999999999999998653   23456799999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++||||+||++|+|++|.+||.+.+      ..+.+.++.+.  .+                    
T Consensus       192 YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~--~~--------------------  243 (304)
T 3ubd_A          192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILKA--KL--------------------  243 (304)
T ss_dssp             GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--CC--------------------
T ss_pred             cCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHcC--CC--------------------
Confidence            999999999999999999999999999999999998644      44555554431  11                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                          ..+...++++.+||.+||+.||++|||     ++|+++||||++
T Consensus       244 --------------------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          244 --------------------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             --------------------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             --------------------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence                                123345567899999999999999998     479999999974

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.6e-39  Score=247.10  Aligned_cols=163  Identities=17%  Similarity=0.318  Sum_probs=120.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|++++.+.+.+.+.+++..+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|+....  .....+||+.|
T Consensus        98 ~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y  177 (275)
T 3hyh_A           98 ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY  177 (275)
T ss_dssp             EHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTT
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECccc
Confidence            5788888888888887755322  222  37888889999999999999999999999999987643  34556999999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+.+| +.++||||+||++++|++|..||.+.+      ....+..+..  +.                     
T Consensus       178 ~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~--~~---------------------  228 (275)
T 3hyh_A          178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISN--GV---------------------  228 (275)
T ss_dssp             SCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--TC---------------------
T ss_pred             CChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc--CC---------------------
Confidence            99999999886 579999999999999999999997533      2333333322  11                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                         ...+...++++.+||.+||+.||++|||++|+|+||||+
T Consensus       229 -------------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k  267 (275)
T 3hyh_A          229 -------------------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK  267 (275)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHH
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccc
Confidence                               012234456788999999999999999999999999996

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.4e-39  Score=246.52  Aligned_cols=166  Identities=14%  Similarity=0.202  Sum_probs=123.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhhc--ccccc--cccccccccccccCC-CcceEEeecCCceeccC-CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRNA--CWVDK--HFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDK-HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~~--~~~~~--~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~-~~~~~~~~~   74 (214)
                      +|++++.+...+....++....  +..+  +|.++  ++|||+||+||+++. ++.+||+|||+|+.... .....+||+
T Consensus       115 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp  194 (290)
T 3fpq_A          115 TLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP  194 (290)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCc
Confidence            6778887777766666543211  3333  56556  899999999999974 79999999999986543 345568999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|||||++.+ +|+.++||||+||++++|++|..||.+..      ....+...... +..|..                
T Consensus       195 ~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~------~~~~~~~~i~~-~~~~~~----------------  250 (290)
T 3fpq_A          195 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVTS-GVKPAS----------------  250 (290)
T ss_dssp             CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHTT-TCCCGG----------------
T ss_pred             cccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC------cHHHHHHHHHc-CCCCCC----------------
Confidence            9999998864 69999999999999999999999997533      33333332211 111110                


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                            .+...++++.+||.+||+.||++|||++|+|+||||++
T Consensus       251 ----------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          251 ----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ----------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                                  11233456789999999999999999999999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=254.47  Aligned_cols=166  Identities=19%  Similarity=0.260  Sum_probs=128.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|++++ +.+++.+.+++..+.  +..  .+|.++++|||+||+|||++.+|.+||+|||+|+....   .....+||+.
T Consensus       234 ~L~~~i-~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~  312 (423)
T 4fie_A          234 ALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY  312 (423)
T ss_dssp             EHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTT
T ss_pred             cHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcC
Confidence            466655 445677777654322  222  37788889999999999999999999999999987743   3456799999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |||||++.+.+|+.++||||+||++|||++|.+||.+.+      ..+.+..+...  .++.                  
T Consensus       313 YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~--~~~~------------------  366 (423)
T 4fie_A          313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN--LPPR------------------  366 (423)
T ss_dssp             TCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS--CCCC------------------
T ss_pred             cCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC--CCCC------------------
Confidence            999999999999999999999999999999999998544      44555444321  1000                  


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                         .......+.++.+||.+||+.||++|+|++|+|+||||++
T Consensus       367 -------------------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          367 -------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             -------------------CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             -------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence                               0012334567899999999999999999999999999963

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.7e-39  Score=251.57  Aligned_cols=163  Identities=18%  Similarity=0.293  Sum_probs=125.9

Q ss_pred             cchhhhhccCch--hhhhHHHHHH---hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCc
Q psy16751          3 SIFNFFVAFGSL--EETDKKRRLY---IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~--~~~d~k~~~~---~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~   72 (214)
                      +|++++...++.  .+..++. ++   +..  .+|.++++|||+||+||+++.++.+||+|||+|+.....   ....+|
T Consensus       109 ~L~~~i~~~~~~~~~e~~~~~-~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~G  187 (350)
T 4b9d_A          109 DLFKRINAQKGVLFQEDQILD-WFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIG  187 (350)
T ss_dssp             BHHHHHHHTTTCCCCHHHHHH-HHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHS
T ss_pred             cHHHHHHHcCCCCCCHHHHHH-HHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCC
Confidence            677888655432  3334322 22   222  377788899999999999999999999999999877532   334589


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+.+|+.++||||+||++|+|++|.+||.+.+      ..+.+.++..  +..+.               
T Consensus       188 T~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~--~~~~~---------------  244 (350)
T 4b9d_A          188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIIS--GSFPP---------------  244 (350)
T ss_dssp             CCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH--TCCCC---------------
T ss_pred             CccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHc--CCCCC---------------
Confidence            999999999999999999999999999999999999998644      4455554443  11110               


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                              .+...+.++.+||.+||+.||++|||++|+|+||||+
T Consensus       245 ------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~  281 (350)
T 4b9d_A          245 ------------------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA  281 (350)
T ss_dssp             ------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             ------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhh
Confidence                                    1233456788999999999999999999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.4e-37  Score=240.80  Aligned_cols=167  Identities=19%  Similarity=0.193  Sum_probs=126.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCc-ceEEeecCCceeccCC--------CCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDKH--------FTE   69 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~~--------~~~   69 (214)
                      +|++++.+.+.+.+..++..+.  +..  .+|.++++|||+||+|||++.+| .+||+|||+|+.....        ...
T Consensus       136 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~  215 (336)
T 4g3f_A          136 SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY  215 (336)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CC
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCc
Confidence            6888888877777777654222  222  37778889999999999999887 5999999999876421        223


Q ss_pred             CCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccc
Q psy16751         70 DVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEF  149 (214)
Q Consensus        70 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  149 (214)
                      .+||+.|||||++.+.+|+.++||||+||++|||++|.+||.+.+.      ...+.++..  +.++.            
T Consensus       216 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~------~~~~~~i~~--~~~~~------------  275 (336)
T 4g3f_A          216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR------GPLCLKIAS--EPPPI------------  275 (336)
T ss_dssp             CCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC------SCCHHHHHH--SCCGG------------
T ss_pred             cccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHc--CCCCc------------
Confidence            4799999999999999999999999999999999999999975442      222222322  11110            


Q ss_pred             ccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHH-------------hcCCCCCC
Q psy16751        150 FTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC-------------LQHPWLQN  214 (214)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~-------------l~hp~f~~  214 (214)
                                               ...++.+++.+.+||.+||+.||++|||+.|+             |+|||+.+
T Consensus       276 -------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          276 -------------------------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             -------------------------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             -------------------------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence                                     01234566788999999999999999999997             57999863

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=7.8e-36  Score=238.61  Aligned_cols=186  Identities=60%  Similarity=1.070  Sum_probs=167.7

Q ss_pred             cccc-ccccccccccccccCCCc-------------------------------------------------ceEEeecC
Q psy16751         29 CWVD-KHFTEDVQTRQYRSLPPF-------------------------------------------------LFDIGTYR   58 (214)
Q Consensus        29 ~~~~-~~~h~d~k~~nil~~~~~-------------------------------------------------~~kl~Dfg   58 (214)
                      +|.+ +++|+|+||.||++..++                                                 .+||+|||
T Consensus       162 lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG  241 (397)
T 1wak_A          162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG  241 (397)
T ss_dssp             HHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGG
T ss_pred             HHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccc
Confidence            6666 789999999999998775                                                 79999999


Q ss_pred             CceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy16751         59 NACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKR  138 (214)
Q Consensus        59 ~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~  138 (214)
                      +|+.........+||+.|+|||++.+..++.++||||+||++++|++|..||.+.+.........++..+.+.+|.+|..
T Consensus       242 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~  321 (397)
T 1wak_A          242 NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK  321 (397)
T ss_dssp             GCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHH
T ss_pred             ccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChH
Confidence            99988777777799999999999999999999999999999999999999998776666566788899999999999999


Q ss_pred             HhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        139 IIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.........++...+.........++............+...+..+.+||.+||++||++|||++|+|+||||++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          322 LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             HhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            8888888888888888888888888888888888888888999999999999999999999999999999999975

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.2e-35  Score=228.99  Aligned_cols=162  Identities=15%  Similarity=0.251  Sum_probs=112.6

Q ss_pred             cchhhhhccCchhhhhHHH--HHH---hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC---------
Q psy16751          3 SIFNFFVAFGSLEETDKKR--RLY---IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~--~~~---~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---------   66 (214)
                      +|.+++.....+...+...  .++   ++.  .+|.++++|||+||+||+++.++.+||+|||+|+.....         
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~  180 (299)
T 4g31_A          101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP  180 (299)
T ss_dssp             CHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---------------
T ss_pred             cHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccc
Confidence            5666776665555544221  122   122  377778899999999999999999999999999876421         


Q ss_pred             ------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhC-CCChHH
Q psy16751         67 ------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLG-DIPKRI  139 (214)
Q Consensus        67 ------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~  139 (214)
                            ....+||+.|||||++.+.+|+.++||||+||+++||++   ||.+        ..+....+..... ..|+.+
T Consensus       181 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~--------~~~~~~~~~~~~~~~~p~~~  249 (299)
T 4g31_A          181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST--------QMERVRTLTDVRNLKFPPLF  249 (299)
T ss_dssp             -----------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS--------HHHHHHHHHHHHTTCCCHHH
T ss_pred             cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC--------ccHHHHHHHHHhcCCCCCCC
Confidence                  123489999999999999999999999999999999995   6642        3333333332211 111111


Q ss_pred             hhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                                             ...++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       250 ---------------------------------------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          250 ---------------------------------------TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             ---------------------------------------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             ---------------------------------------cccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence                                                   122345678999999999999999999999999974

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=8.8e-35  Score=230.88  Aligned_cols=186  Identities=45%  Similarity=0.866  Sum_probs=154.9

Q ss_pred             cccc-cccccccccccccc------CCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVD-KHFTEDVQTRQYRS------LPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~-~~~h~d~k~~nil~------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      +|.+ +++|+|+||.||++      ...+.+||+|||+++.........+||+.|+|||++.+..++.++||||+||+++
T Consensus       147 lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  226 (373)
T 1q8y_A          147 MHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF  226 (373)
T ss_dssp             HHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHH
T ss_pred             HHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHH
Confidence            5666 78999999999999      4455899999999998877777779999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||.+.++.........+..+...+|.+|..+.........++...+..........+............+...
T Consensus       227 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (373)
T 1q8y_A          227 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE  306 (373)
T ss_dssp             HHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHH
T ss_pred             HHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcch
Confidence            99999999987766556667888999999999999998887777777777777777777777777777777777788889


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.++.+||.+||+.||++|||++|+|+||||++
T Consensus       307 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  339 (373)
T 1q8y_A          307 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  339 (373)
T ss_dssp             HHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             HHHHHHHHHHHhccCccccCCHHHHhhChhhhc
Confidence            999999999999999999999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.6e-35  Score=246.96  Aligned_cols=167  Identities=20%  Similarity=0.232  Sum_probs=129.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~   77 (214)
                      ||++++.+...+.+.+++..+.  +..  .+|.++++|||+||+|||++.+|.+||+|||+|+.... .....+||+.|+
T Consensus       278 dL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~Ym  357 (689)
T 3v5w_A          278 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM  357 (689)
T ss_dssp             BHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGC
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCcc
Confidence            6888888888888777754221  222  37788889999999999999999999999999987753 455679999999


Q ss_pred             chHHHhc-CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         78 SLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        78 aPE~~~~-~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      |||++.+ .+|+.++|+||+||++|+|++|.+||.+.+...   ..+....+..  +                       
T Consensus       358 APEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~--~-----------------------  409 (689)
T 3v5w_A          358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLT--M-----------------------  409 (689)
T ss_dssp             CHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHH--C-----------------------
T ss_pred             CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcC--C-----------------------
Confidence            9999975 579999999999999999999999997543211   1111111111  0                       


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                       ....+...++++.+||.+||+.||++|++     |+|+++||||++
T Consensus       410 -----------------~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          410 -----------------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             -----------------CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             -----------------CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence                             11133455678899999999999999998     799999999984

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.8e-35  Score=246.18  Aligned_cols=168  Identities=17%  Similarity=0.260  Sum_probs=129.0

Q ss_pred             cchhhhhcc-CchhhhhHHHHHH--hhh--cccccccccccccccccccCC--CcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAF-GSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~-~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++... +.+.+.+++..+.  +..  .+|.++++|||+||+||++..  .+.+||+|||+|+.....  ....+||
T Consensus       240 ~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT  319 (573)
T 3uto_A          240 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT  319 (573)
T ss_dssp             BHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSS
T ss_pred             cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEEC
Confidence            678888754 4566666644221  222  367778899999999999875  489999999999987543  3456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+.+|+.++||||+||++|+|++|.+||.+.+      ..+.+..+......++..               
T Consensus       320 ~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~---------------  378 (573)
T 3uto_A          320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDDS---------------  378 (573)
T ss_dssp             GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCSG---------------
T ss_pred             ccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHhCCCCCCcc---------------
Confidence            99999999999999999999999999999999999998654      455555554322221111               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             .....+.++++||.+||+.||++|||+.|+|+||||+.
T Consensus       379 -----------------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~  416 (573)
T 3uto_A          379 -----------------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP  416 (573)
T ss_dssp             -----------------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             -----------------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence                                   01234567789999999999999999999999999973

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=2.6e-34  Score=232.39  Aligned_cols=174  Identities=26%  Similarity=0.464  Sum_probs=138.7

Q ss_pred             ccccccccccccccccccCCCcc--eEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFL--FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|..+++|+|+||+||+++.++.  +||+|||+|+.........+||+.|+|||++.+..|+.++||||+||++++|++|
T Consensus       216 LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG  295 (429)
T 3kvw_A          216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG  295 (429)
T ss_dssp             HHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhC
Confidence            66677899999999999998877  9999999998887777778999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCC-----------------------CCC
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP-----------------------GLK  163 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~  163 (214)
                      .+||.+.+      ..+++..+.+.+|.++..+.........++...+......                       ...
T Consensus       296 ~~pf~~~~------~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (429)
T 3kvw_A          296 YPLLPGED------EGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPE  369 (429)
T ss_dssp             SCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTT
T ss_pred             CCCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCcc
Confidence            99998655      7889999999999999998877666555544333211100                       000


Q ss_pred             CCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        164 PWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ...+...      .+...++.+.+||.+||++||++|||++|||+||||++
T Consensus       370 ~~~~~~~------l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~  414 (429)
T 3kvw_A          370 SREWGNA------LKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR  414 (429)
T ss_dssp             CSCHHHH------TTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-
T ss_pred             chhhHhh------ccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhcc
Confidence            0011110      12334567899999999999999999999999999974

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.5e-34  Score=220.32  Aligned_cols=167  Identities=12%  Similarity=0.172  Sum_probs=117.3

Q ss_pred             cchhhhhccC-chhhhhHHHHHHh---h--hcccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLYI---R--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~~---~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~   71 (214)
                      +|++++...+ .+...++.. +..   .  ..+|.++++|||+||+|||++.++.+||+|||+|+....     .....+
T Consensus       117 sL~~~l~~~~~~l~~~~~~~-i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~  195 (307)
T 3omv_A          117 SLYKHLHVQETKFQMFQLID-IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT  195 (307)
T ss_dssp             BHHHHHHTSCCCCCHHHHHH-HHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CC
T ss_pred             CHHHHHhhcCCCCCHHHHHH-HHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccc
Confidence            6777776543 344443322 221   1  136677889999999999999999999999999986642     234568


Q ss_pred             cCCcccchHHHhcC---CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc
Q psy16751         72 QTRQYRSLEVLINA---GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE  148 (214)
Q Consensus        72 ~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  148 (214)
                      ||+.|||||++.+.   +|+.++||||+||++|||++|+.||.+.+      ....+..+.......|.           
T Consensus       196 GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~------~~~~~~~~~~~~~~~p~-----------  258 (307)
T 3omv_A          196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN------NRDQIIFMVGRGYASPD-----------  258 (307)
T ss_dssp             CCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHTTCCCCC-----------
T ss_pred             cCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcCCCCCC-----------
Confidence            99999999999854   58999999999999999999999997544      34444443321111110           


Q ss_pred             cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHH------hcCCCC
Q psy16751        149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC------LQHPWL  212 (214)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~------l~hp~f  212 (214)
                                   .            ...+..++..+.+|+.+||+.||++|||+.|+      |+|++-
T Consensus       259 -------------~------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          259 -------------L------------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             -------------S------------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             -------------c------------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence                         0            01234566788999999999999999999876      567764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.7e-33  Score=223.31  Aligned_cols=177  Identities=27%  Similarity=0.442  Sum_probs=132.6

Q ss_pred             cccccccccccccccC--CCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCC
Q psy16751         32 DKHFTEDVQTRQYRSL--PPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYL  109 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~  109 (214)
                      .+++|+|+||+||++.  .++.+||+|||+|+.........+||+.|+|||++.+.+++.++||||+||+++++++|..|
T Consensus       178 ~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  257 (382)
T 2vx3_A          178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL  257 (382)
T ss_dssp             TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            3579999999999994  47889999999999888777778999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc-----------cccCCCCCCCchhhHHHhh----
Q psy16751        110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE-----------LRHIPGLKPWDLYSVLVEK----  174 (214)
Q Consensus       110 f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~----  174 (214)
                      |.+.+      ..+++..+.+..|.++..+.........++.....           ...............+...    
T Consensus       258 f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  331 (382)
T 2vx3_A          258 FSGAN------EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGP  331 (382)
T ss_dssp             SCCSS------HHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSG
T ss_pred             CCCCC------HHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCC
Confidence            98655      67888999999999988876554433222221100           0000111111111111100    


Q ss_pred             -------cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        175 -------YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       175 -------~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                             .........++.+||.+||++||++|||++|+|+||||++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~  378 (382)
T 2vx3_A          332 GGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK  378 (382)
T ss_dssp             GGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC
T ss_pred             CccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccccc
Confidence                   0112234468899999999999999999999999999974

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.5e-34  Score=234.45  Aligned_cols=175  Identities=23%  Similarity=0.317  Sum_probs=126.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+|+.....  ....+||+.|+|||++.+.+|+.++||||+||++++|++
T Consensus       179 ~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~  258 (464)
T 3ttj_A          179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR  258 (464)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            367777899999999999999999999999999877543  445689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC-----Chh
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW-----TPE  180 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  180 (214)
                      |.+||.+.+      ..+++..+.+.+|.+.+++..........+.     ...+.................     ...
T Consensus       259 g~~pF~g~~------~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (464)
T 3ttj_A          259 HKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-----ENRPKYAGLTFPKLFPDSLFPADSEHNKL  327 (464)
T ss_dssp             SSCSSCCSS------HHHHHHHHHHHHCSCCHHHHTTSCHHHHHHH-----TTSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred             CCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHcchhhhhHh-----hcccccCCCChHHhCcccccccccccccc
Confidence            999998655      7899999999999998877654432111110     111111111111111110000     012


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+.++.+||.+||++||++|||++|+|+||||+
T Consensus       328 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~  360 (464)
T 3ttj_A          328 KASQARDLLSKMLVIDPAKRISVDDALQHPYIN  360 (464)
T ss_dssp             HHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence            256789999999999999999999999999996

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1e-33  Score=226.19  Aligned_cols=181  Identities=20%  Similarity=0.300  Sum_probs=129.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC------------------------CCCCCCcCCcccchHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK------------------------HFTEDVQTRQYRSLEVLI   83 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~------------------------~~~~~~~~~~y~aPE~~~   83 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+|+....                        .....+||+.|+|||++.
T Consensus       124 ~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  203 (388)
T 3oz6_A          124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL  203 (388)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT
T ss_pred             HHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc
Confidence            36777789999999999999999999999999986532                        123458999999999998


Q ss_pred             c-CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc--ccccccCccccCC
Q psy16751         84 N-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS--EFFTKKGELRHIP  160 (214)
Q Consensus        84 ~-~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~  160 (214)
                      + ..|+.++||||+||++++|++|.+||.+.+      ...++..+...+|.++.+.........  .+...........
T Consensus       204 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (388)
T 3oz6_A          204 GSTKYTKGIDMWSLGCILGEILCGKPIFPGSS------TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIR  277 (388)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC--
T ss_pred             CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCccccccc
Confidence            7 469999999999999999999999998655      788999999999998887665432221  0000000000000


Q ss_pred             CCCCCch---hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        161 GLKPWDL---YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       161 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .......   ..............+.++.+||.+||++||++|||++|+|+||||+.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          278 QSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             ---CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             CCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence            0001111   11111122223355678899999999999999999999999999863

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-33  Score=221.20  Aligned_cols=169  Identities=27%  Similarity=0.398  Sum_probs=133.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhhCC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+++.........++|+.|+|||++.+ ..++.++||||+||+++++++|.
T Consensus       144 LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  223 (367)
T 1cm8_A          144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK  223 (367)
T ss_dssp             HHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             HHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            67777899999999999999999999999999988777777799999999999998 57999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||.+.+      ..+++..+.+..|.++.++..........    ......+......+..       .....+..+.+
T Consensus       224 ~pf~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  286 (367)
T 1cm8_A          224 TLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSDEAK----NYMKGLPELEKKDFAS-------ILTNASPLAVN  286 (367)
T ss_dssp             CSSCCSS------HHHHHHHHHHHHCCCCHHHHHTCSCHHHH----HHHHHSCCCCCCCGGG-------TCTTCCHHHHH
T ss_pred             CCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhhhHHHH----HHHHhCCCCCCCCHHH-------HCCCCCHHHHH
Confidence            9998655      68899999999999998876544322100    0000111111111111       12344567899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ||.+||++||++|||++|+|+||||++
T Consensus       287 ll~~mL~~dP~~R~t~~e~l~hp~f~~  313 (367)
T 1cm8_A          287 LLEKMLVLDAEQRVTAGEALAHPYFES  313 (367)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHHHHccCChhHCCCHHHHhcChHHHh
Confidence            999999999999999999999999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4e-33  Score=227.20  Aligned_cols=200  Identities=24%  Similarity=0.340  Sum_probs=134.3

Q ss_pred             chhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC--------------
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--------------   65 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--------------   65 (214)
                      |.+++.....+....++..++  +..  .+|..+++|+|+||+||+++.++.+||+|||+|+....              
T Consensus       143 L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~  222 (458)
T 3rp9_A          143 FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE  222 (458)
T ss_dssp             HHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-----
T ss_pred             hhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccc
Confidence            445555555555555543222  222  36777789999999999999999999999999987642              


Q ss_pred             ----------------CCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhh-----------CCCCCCCCCCCC
Q psy16751         66 ----------------HFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELAT-----------GDYLFEPHAGDT  117 (214)
Q Consensus        66 ----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~-----------g~~~f~~~~~~~  117 (214)
                                      .....+||+.|+|||++.+ ..|+.++||||+||+++||++           |.++|.+.+..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~  302 (458)
T 3rp9_A          223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFP  302 (458)
T ss_dssp             ----------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC------
T ss_pred             cccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccc
Confidence                            1234578999999998864 469999999999999999998           667775432110


Q ss_pred             --------------CCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        118 --------------YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       118 --------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                                    .....+++..+...+|.++.+............    .....+.........       ..+..+.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-------~~~~~s~  371 (458)
T 3rp9_A          303 LSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKR----YIRIFPKREGTDLAE-------RFPASSA  371 (458)
T ss_dssp             --------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHH----HHTTSCCCCCCCGGG-------GSTTSCH
T ss_pred             ccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHH----HHHhcCCCCCCCHHH-------HCCCCCH
Confidence                          011368889999999999988765543321100    001111111111111       1133466


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.+||.+||++||++|||++|+|+||||++
T Consensus       372 ~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~  402 (458)
T 3rp9_A          372 DAIHLLKRMLVFNPNKRITINECLAHPFFKE  402 (458)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcCHhhhh
Confidence            7899999999999999999999999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.7e-33  Score=217.62  Aligned_cols=168  Identities=24%  Similarity=0.396  Sum_probs=125.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|+||+||+++.++.+||+|||+++....   .....+||+.|+|||++.+. .++.++||||+||++++++
T Consensus       135 LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll  214 (311)
T 3niz_A          135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI  214 (311)
T ss_dssp             HHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHH
Confidence            6677789999999999999999999999999987753   23445889999999999875 5899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+.+..+....+.++............+.....     ..........       ..+..+.+
T Consensus       215 ~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~~  276 (311)
T 3niz_A          215 TGKPLFPGVT------DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF-----QVFEKKPWSS-------IIPGFCQE  276 (311)
T ss_dssp             HSSCSCCCSS------TTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC-----CCCCCCCHHH-------HSTTCCHH
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHHCCCChHHhhhhhccchhhhccc-----ccccCCcHHH-------hCcccCHH
Confidence            9999998655      4667888888888876654433322222111100     0000011110       11334567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||++||++|||++|+|+||||++
T Consensus       277 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          277 GIDLLSNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence            789999999999999999999999999985

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.5e-32  Score=217.30  Aligned_cols=179  Identities=25%  Similarity=0.370  Sum_probs=131.8

Q ss_pred             ccccccccccccccccccCC-------------------------CcceEEeecCCceeccCCCCCCCcCCcccchHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-------------------------PFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI   83 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~   83 (214)
                      +|...++|+|+||+||++..                         ++.+||+|||+|+.........+||+.|+|||++.
T Consensus       153 LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~  232 (360)
T 3llt_A          153 LRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL  232 (360)
T ss_dssp             HHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHT
T ss_pred             HHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHc
Confidence            66777899999999999975                         78999999999998877777789999999999999


Q ss_pred             cCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc--ccccccCccccCCC
Q psy16751         84 NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS--EFFTKKGELRHIPG  161 (214)
Q Consensus        84 ~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  161 (214)
                      +.+++.++||||+||+++++++|..||.+.+      ..+.+..+....+.+|..+........  .+..........+.
T Consensus       233 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~  306 (360)
T 3llt_A          233 NLGWDVSSDMWSFGCVLAELYTGSLLFRTHE------HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE  306 (360)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTT
T ss_pred             CCCCCCccchHHHHHHHHHHHHCCCCCCCCc------HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcc
Confidence            9999999999999999999999999998655      678888888998998887765433221  11111111111111


Q ss_pred             CCCCchh-hHHHhhc-CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        162 LKPWDLY-SVLVEKY-NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       162 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ....... ....... ..+...+..+.+||.+||++||++|||++|+|+||||+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          307 NASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            1110000 0000000 00112235778999999999999999999999999996

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-32  Score=212.96  Aligned_cols=166  Identities=24%  Similarity=0.326  Sum_probs=127.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.+.++|+|+||+||+++.++.+||+|||+++....  .....+||+.|+|||++.+..++.++||||+||+++++++
T Consensus       135 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~  214 (308)
T 3g33_A          135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR  214 (308)
T ss_dssp             HHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTT
T ss_pred             HHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHh
Confidence            36777789999999999999999999999999986643  2344588999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |.+||.+.+      ..+++..+.+..+.++.............        ..+...+.....       ..+..+..+
T Consensus       215 g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-------~~~~~~~~~  273 (308)
T 3g33_A          215 RKPLFCGNS------EADQLGKIFDLIGLPPEDDWPRDVSLPRG--------AFPPRGPRPVQS-------VVPEMEESG  273 (308)
T ss_dssp             SSCSCCCSS------HHHHHHHHHHHHCCCCTTTSCSSCSSCGG--------GSCCCCCCCHHH-------HSCSCCHHH
T ss_pred             CCCCCCCCC------HHHHHHHHHHHhCCCChhhccchhhcccc--------ccCCCCCCcHHH-------hCccccHHH
Confidence            999998655      67888888888888776543322111100        011111111111       123455678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+||.+||++||++|||+.|+|+||||++
T Consensus       274 ~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          274 AQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             HHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence            89999999999999999999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=6.6e-33  Score=219.98  Aligned_cols=169  Identities=24%  Similarity=0.341  Sum_probs=120.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhhCC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      +|..+++|+|+||+||+++.++.+||+|||+++.........+||+.|+|||++.+ ..++.++||||+||++++|++|.
T Consensus       148 LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  227 (367)
T 2fst_X          148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  227 (367)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSS
T ss_pred             HHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCC
Confidence            66777899999999999999999999999999887766667799999999999988 57999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||.+.+      ..+++..+.+..|.++.............    ......+......+...       ....++.+.+
T Consensus       228 ~pf~~~~------~~~~l~~i~~~~g~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-------~~~~~~~~~d  290 (367)
T 2fst_X          228 TLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESAR----NYIQSLTQMPKMNFANV-------FIGANPLAVD  290 (367)
T ss_dssp             CSCCCSS------HHHHHHHHHHHHCSCCHHHHTTCCCHHHH----HHHHTSCCCCCCCHHHH-------TTTCCHHHHH
T ss_pred             CCCCCCC------HHHHHHHHHHHhCCCCHHHHHHhhhHHHH----HHHhccCCCCCCCHHHH-------CCCCCHHHHH
Confidence            9998655      68899999999999988766543322100    00001111111111111       1234567889


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ||.+||++||++|||++|+|+||||++
T Consensus       291 Ll~~mL~~dP~~R~t~~e~L~hp~~~~  317 (367)
T 2fst_X          291 LLEKMLVLDSDKRITAAQALAHAYFAQ  317 (367)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHhCCCCcccCcCHHHHhcChhhhh
Confidence            999999999999999999999999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.7e-32  Score=222.05  Aligned_cols=201  Identities=23%  Similarity=0.320  Sum_probs=135.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC------------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------------   66 (214)
                      +|.+++.....+....++..++  +.  ..+|..+++|+|+||+||+++.++.+||+|||+|+.....            
T Consensus       115 ~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~  194 (432)
T 3n9x_A          115 DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN  194 (432)
T ss_dssp             EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---------------
T ss_pred             CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccccccccc
Confidence            3455555555555555543222  22  2367777899999999999999999999999999876432            


Q ss_pred             -------------CCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhhC-----------CCCCCCCCCCCC---
Q psy16751         67 -------------FTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATG-----------DYLFEPHAGDTY---  118 (214)
Q Consensus        67 -------------~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~g-----------~~~f~~~~~~~~---  118 (214)
                                   ....+||+.|+|||++.+ ..|+.++||||+||++++|++|           .++|.+.+..+.   
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~  274 (432)
T 3n9x_A          195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPD  274 (432)
T ss_dssp             ----------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----
T ss_pred             ccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcc
Confidence                         245689999999999754 4699999999999999999984           444443221000   


Q ss_pred             --------CCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHH
Q psy16751        119 --------TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR  190 (214)
Q Consensus       119 --------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  190 (214)
                              ....+++..+...+|.++.+...........-.    ....+...+......       .+..+.++.+||.
T Consensus       275 ~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-------~~~~s~~~~dLl~  343 (432)
T 3n9x_A          275 RNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY----IKLFPHRKPINLKQK-------YPSISDDGINLLE  343 (432)
T ss_dssp             ------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHH----HHTSCCCCCCCHHHH-------STTSCHHHHHHHH
T ss_pred             cccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHH----HHhCCCCCCCCHHHH-------CCCCCHHHHHHHH
Confidence                    013688899999999999877654433211100    001111111111111       1235667899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCC
Q psy16751        191 PMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       191 ~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +||++||++|||++|||+||||++
T Consensus       344 ~mL~~dP~~R~ta~e~L~Hp~f~~  367 (432)
T 3n9x_A          344 SMLKFNPNKRITIDQALDHPYLKD  367 (432)
T ss_dssp             HHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred             HHhcCCcccCCCHHHHhcChhhhh
Confidence            999999999999999999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.98  E-value=4.6e-33  Score=218.80  Aligned_cols=135  Identities=13%  Similarity=0.173  Sum_probs=107.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|||+|++||+++.++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++||||+||++|||
T Consensus       201 LH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El  280 (353)
T 4ase_A          201 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI  280 (353)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHH
Confidence            67777899999999999999999999999999876432     2234789999999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      ..+.+...+.. |..                                       ...+..++
T Consensus       281 ~t~G~~Pf~~~~------~~~~~~~~i~~-g~~---------------------------------------~~~p~~~~  314 (353)
T 4ase_A          281 FSLGASPYPGVK------IDEEFCRRLKE-GTR---------------------------------------MRAPDYTT  314 (353)
T ss_dssp             TTTSCCSSTTCC------CSHHHHHHHHH-TCC---------------------------------------CCCCTTCC
T ss_pred             HhCCCCCCCCCC------HHHHHHHHHHc-CCC---------------------------------------CCCCccCC
Confidence            98 899997543      22333333221 110                                       01234456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +++.+||.+||+.||++|||++|+++|
T Consensus       315 ~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          315 PEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            678999999999999999999999976

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.98  E-value=3.1e-32  Score=209.63  Aligned_cols=169  Identities=23%  Similarity=0.354  Sum_probs=125.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++..+.   .....+||+.|+|||++.+.. ++.++||||+||+++++
T Consensus       116 ~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  195 (292)
T 3o0g_A          116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL  195 (292)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHH
Confidence            36777789999999999999999999999999987653   234558899999999998876 89999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.....     ..+++..+.+..+.++............+...    ...+...  .       .....+..+.
T Consensus       196 ~~~~~p~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~-------~~~~~~~~~~  257 (292)
T 3o0g_A          196 ANAGRPLFPGND-----VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY----PMYPATT--S-------LVNVVPKLNA  257 (292)
T ss_dssp             TTTSCCSCCCSS-----HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC----CCCCTTC--C-------CTTTSTTCCH
T ss_pred             HHcCCCCcCCCC-----HHHHHHHHHHHhCCCChhhhhhhccccccccc----ccccCCc--c-------hhhcccccCh
Confidence            988777543321     67788888888888776544332221111000    0000000  0       0112234566


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.+|+.+||++||++|||++|+|+||||++
T Consensus       258 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence            7889999999999999999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.98  E-value=2.2e-32  Score=214.10  Aligned_cols=179  Identities=24%  Similarity=0.406  Sum_probs=136.0

Q ss_pred             cccccccccccccccccccCC-------------------CcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-------------------PFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYD   88 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~   88 (214)
                      .+|.++++|+|+||+||++..                   ++.+||+|||+++.........+||+.|+|||++.+..++
T Consensus       133 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  212 (339)
T 1z57_A          133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWS  212 (339)
T ss_dssp             HHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCC
T ss_pred             HHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCC
Confidence            367777899999999999987                   6689999999998877777777999999999999998999


Q ss_pred             cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchh
Q psy16751         89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLY  168 (214)
Q Consensus        89 ~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (214)
                      .++||||+||+++++++|..||...+      ..+.+..+.+..+.+|..+.........+............  .....
T Consensus       213 ~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  284 (339)
T 1z57_A          213 QPCDVWSIGCILIEYYLGFTVFPTHD------SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSS--AGRYV  284 (339)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSC------HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSH--HHHHH
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccccccc--ccchh
Confidence            99999999999999999999998655      67788888899999998887665544333222111111000  00000


Q ss_pred             ----hHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        169 ----SVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       169 ----~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                          .............+..+.+||.+||+.||++|||++|+|+||||++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          285 SRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             HHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             hhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence                0000111223456778899999999999999999999999999973

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.98  E-value=4.3e-32  Score=214.74  Aligned_cols=167  Identities=19%  Similarity=0.333  Sum_probs=127.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCc----ceEEeecCCceeccC--CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPF----LFDIGTYRNACWVDK--HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~----~~kl~Dfg~a~~~~~--~~~~~~~   72 (214)
                      +|++++.....+...++...+.  +..  .+|.++++|+|+||+||++..++    .+||+|||++.....  .....+|
T Consensus       101 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~g  180 (361)
T 2yab_A          101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG  180 (361)
T ss_dssp             BHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCS
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCC
Confidence            6777777777776666644322  222  36777789999999999987766    799999999987754  3455689


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+.+|+.++||||+||++++|++|.+||.+.+      ..+.+..+......++...             
T Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~-------------  241 (361)
T 2yab_A          181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITAVSYDFDEEF-------------  241 (361)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCHHH-------------
T ss_pred             CccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCCCCCchh-------------
Confidence            999999999999899999999999999999999999997644      3444444433211212111             


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                               ....+..+.+||.+||+.||++|||+.|+|+||||+
T Consensus       242 -------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          242 -------------------------FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             -------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             -------------------------ccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence                                     023345678999999999999999999999999997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.98  E-value=2.6e-32  Score=215.05  Aligned_cols=178  Identities=24%  Similarity=0.406  Sum_probs=136.1

Q ss_pred             cccccccccccccccccc-------------------CCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCc
Q psy16751         29 CWVDKHFTEDVQTRQYRS-------------------LPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDC   89 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~-------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~   89 (214)
                      +|.++++|+|+||.||++                   ..++.+||+|||+++.........+||+.|+|||++.+..++.
T Consensus       139 lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  218 (355)
T 2eu9_A          139 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQ  218 (355)
T ss_dssp             HHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCT
T ss_pred             HHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCC
Confidence            677778999999999999                   5678999999999998777777779999999999999989999


Q ss_pred             chhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhh
Q psy16751         90 SADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS  169 (214)
Q Consensus        90 ~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (214)
                      ++||||+||+++++++|..||.+.+      ..+.+..+....+.+|..+.........++............  .....
T Consensus       219 ~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  290 (355)
T 2eu9_A          219 PCDVWSIGCILFEYYRGFTLFQTHE------NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSD--GRYVK  290 (355)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHH--HHHHH
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccch--hcccc
Confidence            9999999999999999999998655      677888889999999998877665544433222111110000  00000


Q ss_pred             ----HHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        170 ----VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       170 ----~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                          ............+.++.+||.+||++||++|||+.|+|+||||++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  339 (355)
T 2eu9_A          291 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAG  339 (355)
T ss_dssp             HHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             ccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcC
Confidence                000011123445678899999999999999999999999999963

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.98  E-value=3.7e-32  Score=212.62  Aligned_cols=163  Identities=16%  Similarity=0.378  Sum_probs=124.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|++++...+.+....+...+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||++.....  .....+||+.|
T Consensus       100 ~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y  179 (328)
T 3fe3_A          100 EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPY  179 (328)
T ss_dssp             BHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGG
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcce
Confidence            5667777766666665544222  22  236777889999999999999999999999999976642  34556899999


Q ss_pred             cchHHHhcCCCC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+..+. .++||||+||+++++++|..||.+.+      .......+..  +.                     
T Consensus       180 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~--~~---------------------  230 (328)
T 3fe3_A          180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLR--GK---------------------  230 (328)
T ss_dssp             CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CC---------------------
T ss_pred             eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--CC---------------------
Confidence            999999998865 79999999999999999999997543      2232222221  11                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                         ...+...+.++.+|+.+||+.||.+|||++|+|+||||+
T Consensus       231 -------------------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~  269 (328)
T 3fe3_A          231 -------------------YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWIN  269 (328)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTT
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhc
Confidence                               012233456778999999999999999999999999996

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.98  E-value=1.5e-32  Score=212.39  Aligned_cols=134  Identities=13%  Similarity=0.124  Sum_probs=107.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|||+|++||+++.++.+||+|||+|+....     .....+||+.|+|||++.+..|+.++||||+||++||+
T Consensus       161 LH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El  240 (308)
T 4gt4_A          161 LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV  240 (308)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHH
Confidence            5667789999999999999999999999999986632     23445899999999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      ..+.+..+..  |..                                       ...+..++
T Consensus       241 ~t~g~~Pf~~~~------~~~~~~~i~~--~~~---------------------------------------~~~p~~~~  273 (308)
T 4gt4_A          241 FSYGLQPYCGYS------NQDVVEMIRN--RQV---------------------------------------LPCPDDCP  273 (308)
T ss_dssp             HTTTCCTTTTCC------HHHHHHHHHT--TCC---------------------------------------CCCCTTCC
T ss_pred             HhCCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCcccch
Confidence            98 889997544      3333332221  110                                       01234566


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+|+.+||+.||++|||++|++++
T Consensus       274 ~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          274 AWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            778899999999999999999999864

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.5e-32  Score=214.15  Aligned_cols=134  Identities=13%  Similarity=0.193  Sum_probs=101.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|...++|||+|++||+++.++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++||||+||++||+
T Consensus       174 LH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~El  253 (329)
T 4aoj_A          174 LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI  253 (329)
T ss_dssp             HHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHH
Confidence            56677899999999999999999999999999876322     2345799999999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |+.||.+.+      ..+.+..+.+  |..                                       ...+..++
T Consensus       254 lt~G~~Pf~~~~------~~~~~~~i~~--g~~---------------------------------------~~~p~~~~  286 (329)
T 4aoj_A          254 FTYGKQPWYQLS------NTEAIDCITQ--GRE---------------------------------------LERPRACP  286 (329)
T ss_dssp             HTTSCCTTCSSC------HHHHHHHHHH--TCC---------------------------------------CCCCTTCC
T ss_pred             HcCCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCccccc
Confidence            98 899997544      3444433322  110                                       01234556


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +++.+||.+||+.||++|||++|++++
T Consensus       287 ~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          287 PEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            778999999999999999999998753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=215.38  Aligned_cols=169  Identities=23%  Similarity=0.407  Sum_probs=122.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|..+++|+|+||.||+++.++.+||+|||+++....   .....+||+.|+|||++.+. .++.++||||+||+++++
T Consensus       115 ~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  194 (324)
T 3mtl_A          115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM  194 (324)
T ss_dssp             HHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHH
Confidence            36677789999999999999999999999999986643   23345789999999999874 689999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      ..+++..+.+.+|.++............+...     ..+.........       .....+.
T Consensus       195 ~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~~  256 (324)
T 3mtl_A          195 ATGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKTY-----NYPKYRAEALLS-------HAPRLDS  256 (324)
T ss_dssp             HHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT-----CCCCCCCCCHHH-------HCTTSCH
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHhCCCChHhchhhhcchhhccc-----ccccccchhhhh-------hcCCCCH
Confidence            99999998655      67888889999998776544332221111000     011111111110       1234456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.+||.+||++||++|||++|+|+||||.+
T Consensus       257 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          257 DGADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence            7889999999999999999999999999963

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=1.4e-32  Score=211.78  Aligned_cols=132  Identities=14%  Similarity=0.225  Sum_probs=105.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.+.++|||+||+||+++.++.+||+|||+|+.....     .....||+.|+|||++.+..|+.++||||+||++|||
T Consensus       144 LH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~El  223 (299)
T 4asz_A          144 LASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI  223 (299)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            66777899999999999999999999999999866332     2234689999999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |+.||.+.+      ..+.+..+.+  |..+                                       ..+..++
T Consensus       224 lt~G~~Pf~~~~------~~~~~~~i~~--~~~~---------------------------------------~~p~~~~  256 (299)
T 4asz_A          224 FTYGKQPWYQLS------NNEVIECITQ--GRVL---------------------------------------QRPRTCP  256 (299)
T ss_dssp             HTTTCCTTTTSC------HHHHHHHHHH--TCCC---------------------------------------CCCTTCC
T ss_pred             HcCCCCCCCCCC------HHHHHHHHHc--CCCC---------------------------------------CCCccch
Confidence            98 899997544      3444433332  1110                                       1234556


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHh
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                      .++.+||.+||+.||++|||++|++
T Consensus       257 ~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          257 QEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHH
Confidence            6789999999999999999999985

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=7.6e-32  Score=215.80  Aligned_cols=167  Identities=23%  Similarity=0.440  Sum_probs=130.2

Q ss_pred             ccccccccccccccccccC-CCcceEEeecCCceecc--CCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSL-PPFLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|+||+||+++ .++.+||+|||+|+...  ......+||+.|+|||++.+. .|+.++||||+||++++++
T Consensus       157 LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell  236 (394)
T 4e7w_A          157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM  236 (394)
T ss_dssp             HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            6677789999999999998 78999999999998763  334556899999999999876 5999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.+||.+.+      ..+++..+.+.+|.++.+........  +..     ...+......+...      .+...+.+
T Consensus       237 ~g~~pf~~~~------~~~~l~~i~~~~g~p~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~------~~~~~~~~  297 (394)
T 4e7w_A          237 QGQPLFPGES------GIDQLVEIIKVLGTPSREQIKTMNPN--YME-----HKFPQIRPHPFSKV------FRPRTPPD  297 (394)
T ss_dssp             HSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCGG--GSS-----SCCCCCCCCCHHHH------SCTTCCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhChh--hhh-----hccccccCCcHHHh------ccccCCHH
Confidence            9999998655      68899999999999887765432111  100     01122222222111      22345668


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||++||++|||+.|+|+||||++
T Consensus       298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          298 AIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             HHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence            899999999999999999999999999974

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=8.5e-32  Score=209.71  Aligned_cols=164  Identities=16%  Similarity=0.216  Sum_probs=127.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||+++.........+||+.|+|
T Consensus        92 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~a  171 (318)
T 1fot_A           92 ELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIA  171 (318)
T ss_dssp             BHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCC
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccC
Confidence            5666666666655555533211  22  2367777899999999999999999999999999988776677799999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+.+++.++|+||+||++++|++|..||...+      .......+...  .                        
T Consensus       172 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~--~------------------------  219 (318)
T 1fot_A          172 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNA--E------------------------  219 (318)
T ss_dssp             HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHC--C------------------------
T ss_pred             HhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhC--C------------------------
Confidence            999999899999999999999999999999997543      33444433321  0                        


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                      ...+...+.++.+||.+||+.||++|+     +++++++||||++
T Consensus       220 ----------------~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          220 ----------------LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             ----------------CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             ----------------CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence                            012233455778999999999999999     8999999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.3e-31  Score=208.56  Aligned_cols=172  Identities=27%  Similarity=0.471  Sum_probs=128.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|+||+||+++.++.+||+|||+++....   .....+||+.|+|||++.+. .++.++||||+||++++++
T Consensus       124 lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~  203 (317)
T 2pmi_A          124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI  203 (317)
T ss_dssp             HHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHH
Confidence            6667789999999999999999999999999987653   23455889999999999875 5899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+++..+.+..|.++............+..      ..+..............  .....+.+
T Consensus       204 ~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~  269 (317)
T 2pmi_A          204 TGKPLFPGTN------DEEQLKLIFDIMGTPNESLWPSVTKLPKYNP------NIQQRPPRDLRQVLQPH--TKEPLDGN  269 (317)
T ss_dssp             HSSCSCCCSS------HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCT------TCCCCCCCCSHHHHGGG--CSSCCCHH
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHhCCCChhHhhhhhhhhhccc------ccccccchhHHHhhccc--ccccCCHH
Confidence            9999998655      6788888888888877655433322211110      01111111111111111  12345567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||+.||++|||++|+|+||||++
T Consensus       270 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          270 LMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence            899999999999999999999999999974

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=8.6e-32  Score=206.85  Aligned_cols=167  Identities=22%  Similarity=0.368  Sum_probs=121.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+++....   ......||+.|+|||++.+. .++.++||||+||++++++
T Consensus       116 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  195 (288)
T 1ob3_A          116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV  195 (288)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHH
Confidence            6677789999999999999999999999999987643   23445789999999999875 5899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+.+..+.+..+.++............+-      .......+..+.       ......+.+
T Consensus       196 ~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~  256 (288)
T 1ob3_A          196 NGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYD------PNFTVYEPLPWE-------SFLKGLDES  256 (288)
T ss_dssp             HSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTCC------TTCCCCCCCCGG-------GTCCSCCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHHHHCCCChhhchhhhcccccc------cccccccCccHH-------HHhhhcCHH
Confidence            9999998654      677888888888876554332211111100      000000011100       012334567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||+.||++|||++|+|+||||++
T Consensus       257 ~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          257 GIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            789999999999999999999999999974

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=3.2e-32  Score=214.94  Aligned_cols=164  Identities=13%  Similarity=0.173  Sum_probs=122.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++..+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus       110 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~  189 (353)
T 3txo_A          110 DLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD  189 (353)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGG
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcC
Confidence            5666666666666666544221  22  23677778999999999999999999999999998642   23445689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..|+.++|+||+||++++|++|..||.+.+      ..+....+...  .                     
T Consensus       190 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~--~---------------------  240 (353)
T 3txo_A          190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILND--E---------------------  240 (353)
T ss_dssp             GCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--C---------------------
T ss_pred             eEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC------HHHHHHHHHcC--C---------------------
Confidence            999999999899999999999999999999999997544      34444444321  1                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH------HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA------ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~------~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+||.+||+.||++|+++      +|+++||||++
T Consensus       241 -------------------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          241 -------------------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence                               01223345577899999999999999998      89999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=1.6e-31  Score=215.56  Aligned_cols=166  Identities=21%  Similarity=0.347  Sum_probs=127.5

Q ss_pred             ccccccccccccccccccCCC-cceEEeecCCceecc--CCCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|+|++||+++.+ +.+||+|||+++...  ......+||+.|+|||++.+. .|+.++||||+||++++|+
T Consensus       172 LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell  251 (420)
T 1j1b_A          172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL  251 (420)
T ss_dssp             HHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHH
Confidence            667778999999999999854 678999999998763  334456899999999999876 6999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|++||.+.+      ..+++..+.+.+|.+..+.+.........       ...+......+...      .+...+.+
T Consensus       252 ~G~~pf~~~~------~~~~l~~i~~~lg~p~~~~~~~~~~~~~~-------~~~p~~~~~~~~~~------~~~~~~~~  312 (420)
T 1j1b_A          252 LGQPIFPGDS------GVDQLVEIIKVLGTPTREQIREMNPNYTE-------FKFPQIKAHPWTKV------FRPRTPPE  312 (420)
T ss_dssp             HSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHHHHCSCCCC-------CCCCCCCCCCHHHH------SCTTSCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhChhhhh-------hccCccCCCCHHHh------cCCCCCHH
Confidence            9999998655      68899999999999887655432111000       01111122122111      12344567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+||.+||++||.+|||+.|+|+||||+
T Consensus       313 ~~~Li~~~L~~dP~~R~t~~e~l~hp~f~  341 (420)
T 1j1b_A          313 AIALCSRLLEYTPTARLTPLEACAHSFFD  341 (420)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             HHHHHHHhccCChhHCCCHHHHhCCHhhc
Confidence            89999999999999999999999999996

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=1.3e-31  Score=214.03  Aligned_cols=171  Identities=19%  Similarity=0.190  Sum_probs=124.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceec---cCCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV---DKHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~~~   75 (214)
                      +|++++.....+....++..+.  +.  ..+|..+++|||+||+||+++.++.+||+|||+|+..   .......+||+.
T Consensus       139 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~  218 (396)
T 4dc2_A          139 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN  218 (396)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGG
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcc
Confidence            4566666666666555543221  12  2367778899999999999999999999999999863   234556689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCC--CCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT--YTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      |+|||++.+.+|+.++|+||+||++++|++|.+||.......  .......+.....                       
T Consensus       219 Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~-----------------------  275 (396)
T 4dc2_A          219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-----------------------  275 (396)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH-----------------------
T ss_pred             cCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh-----------------------
Confidence            999999999999999999999999999999999996432111  0011111111111                       


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH------HHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA------ADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~------~e~l~hp~f~~  214 (214)
                                        ......+...+.++.+||.+||+.||++|+|+      +|+++||||++
T Consensus       276 ------------------~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          276 ------------------EKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             ------------------HCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             ------------------ccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence                              01112334556678999999999999999985      79999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=3.9e-32  Score=212.60  Aligned_cols=194  Identities=25%  Similarity=0.370  Sum_probs=132.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hccccccccccccccccccc-----CCCcceEEeecCCceeccC---CCCCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRS-----LPPFLFDIGTYRNACWVDK---HFTED   70 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~-----~~~~~~kl~Dfg~a~~~~~---~~~~~   70 (214)
                      +|.+++.....+....++..+.  +.  ..+|..+++|+|+||+||++     ...+.+||+|||+++....   .....
T Consensus       118 ~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  197 (329)
T 3gbz_A          118 DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE  197 (329)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---------
T ss_pred             CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCC
Confidence            4556666655555555543221  22  23677778999999999999     4456699999999987653   23445


Q ss_pred             CcCCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccc
Q psy16751         71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEF  149 (214)
Q Consensus        71 ~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  149 (214)
                      +||+.|+|||++.+. .++.++||||+||+++++++|..||.+.+      ..+++..+.+..+.++............+
T Consensus       198 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (329)
T 3gbz_A          198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS------EIDQLFKIFEVLGLPDDTTWPGVTALPDW  271 (329)
T ss_dssp             --CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC------HHHHHHHHHHHhCCCchhhhhhhhhhhhh
Confidence            789999999999886 48999999999999999999999998655      67888888888887765443222211111


Q ss_pred             ccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        150 FTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .      ...+...........      +...+.++.+||.+||++||++|||++|+|+||||++
T Consensus       272 ~------~~~~~~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  324 (329)
T 3gbz_A          272 K------QSFPKFRGKTLKRVL------GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH  324 (329)
T ss_dssp             C------TTCCCCCCCCHHHHH------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             h------hhhhhhccccHhhhc------ccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence            1      111111222221111      1234567889999999999999999999999999974

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=3.7e-31  Score=206.81  Aligned_cols=168  Identities=22%  Similarity=0.338  Sum_probs=126.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCc----ceEEeecCCceecc--CCCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPF----LFDIGTYRNACWVD--KHFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~----~~kl~Dfg~a~~~~--~~~~~~~~   72 (214)
                      +|.+++.....+...++...+.  +..  .+|..+++|+|++|.||++..++    .+||+|||+++...  ......+|
T Consensus       100 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g  179 (326)
T 2y0a_A          100 ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG  179 (326)
T ss_dssp             BHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCS
T ss_pred             CHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccC
Confidence            5667776666666655543222  222  36667789999999999998877    89999999998774  33455689


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+..++.++||||+||+++++++|..||.+.+      ..+.+..+.......+...             
T Consensus       180 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~-------------  240 (326)
T 2y0a_A          180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYEFEDEY-------------  240 (326)
T ss_dssp             CTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHTCCCCCHHH-------------
T ss_pred             CcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHHhcCCCcCccc-------------
Confidence            999999999998899999999999999999999999997544      3444444433211111111             


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                               ....+..+.+||.+||+.||++|||+.|+|+||||+.
T Consensus       241 -------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          241 -------------------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             -------------------------HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             -------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence                                     0233456789999999999999999999999999973

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=2.1e-31  Score=211.67  Aligned_cols=170  Identities=25%  Similarity=0.357  Sum_probs=126.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++.........+||+.|+|||++.+ ..++.++||||+||+++++++|
T Consensus       159 ~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  238 (371)
T 4exu_A          159 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG  238 (371)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHS
T ss_pred             HHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhC
Confidence            366777899999999999999999999999999988777777789999999999988 5799999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.+.+      ..+.+..+.+..|.++.++...........    .....+.........       .....+..+.
T Consensus       239 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-------~~~~~~~~~~  301 (371)
T 4exu_A          239 KTLFKGKD------YLDQLTQILKVTGVPGTEFVQKLNDKAAKS----YIQSLPQTPRKDFTQ-------LFPRASPQAA  301 (371)
T ss_dssp             SCSCCCSS------HHHHHHHHHHHHCCCCHHHHTTCSCHHHHH----HHHHSCCCCCCCHHH-------HSTTSCHHHH
T ss_pred             CCCCCCCC------hHHHHHHHHHHhCCCcHHHHHHhhhhhhhh----hhhccCCCcchhHHH-------hccccChHHH
Confidence            99998655      688889999999999887765443221100    000011111111110       1134466789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +||.+||++||++|||++|+|+||||+.
T Consensus       302 ~li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          302 DLLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHCCCChhhcCCHHHHhcCccccc
Confidence            9999999999999999999999999973

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=215.09  Aligned_cols=183  Identities=20%  Similarity=0.259  Sum_probs=121.4

Q ss_pred             ccccccccccccccccccc----CCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRS----LPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSV   96 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~----~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~   96 (214)
                      .+|...++|+|+||+||++    ..++.+||+|||+|+.....      ....+||+.|+|||++.+. .++.++||||+
T Consensus       143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  222 (405)
T 3rgf_A          143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI  222 (405)
T ss_dssp             HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHH
T ss_pred             HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHH
Confidence            3677778999999999999    67799999999999876532      3345889999999999985 48999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCC---CCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         97 ACMAFELATGDYLFEPHAGD---TYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        97 G~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||++++|++|.+||.+....   ......+++..+...+|.++...+................... ............ 
T Consensus       223 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-  300 (405)
T 3rgf_A          223 GCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN-TYTNCSLIKYME-  300 (405)
T ss_dssp             HHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGG-GGTTCCHHHHHH-
T ss_pred             HHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhcccc-CCCcchhhhhHh-
Confidence            99999999999999765421   1123468899999999988765443322211110000000000 000000000010 


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                        ......+..+.+||.+||++||++|||++|||+||||++
T Consensus       301 --~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~  339 (405)
T 3rgf_A          301 --KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE  339 (405)
T ss_dssp             --TTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTS
T ss_pred             --hcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhcc
Confidence              011122456789999999999999999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=1.9e-31  Score=210.25  Aligned_cols=171  Identities=18%  Similarity=0.249  Sum_probs=127.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-------CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+|+....       .....+||+.|+|||++.+. .++.++||||+||+
T Consensus       139 ~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  218 (351)
T 3mi9_A          139 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  218 (351)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             HHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHH
Confidence            36677789999999999999999999999999987642       23445789999999999875 58999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|.+||.+.+      ...++..+.+..+.++............+...    . ...............     .
T Consensus       219 l~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~-----~  282 (351)
T 3mi9_A          219 MAEMWTRSPIMQGNT------EQHQLALISQLCGSITPEVWPNVDNYELYEKL----E-LVKGQKRKVKDRLKA-----Y  282 (351)
T ss_dssp             HHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSS----C-CCSSCCCCHHHHHHH-----H
T ss_pred             HHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChhhccccccchhhccc----c-cccccccCHHHHhhh-----c
Confidence            999999999998655      67888888888888877654433222211100    0 011111111111111     1


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..++.+.+||.+||++||++|||++|+|+||||++
T Consensus       283 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  317 (351)
T 3mi9_A          283 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  317 (351)
T ss_dssp             HCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred             cCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence            12456789999999999999999999999999964

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=2e-31  Score=210.23  Aligned_cols=164  Identities=16%  Similarity=0.257  Sum_probs=127.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+||.||+++.++.+||+|||+++.........+||+.|+|
T Consensus       127 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~a  206 (350)
T 1rdq_E          127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALA  206 (350)
T ss_dssp             BHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCC
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccC
Confidence            5666666655555555433211  12  2367777899999999999999999999999999988776667799999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+.+++.++|+||+||++++|++|..||.+.+      ..+....+..  +.+                       
T Consensus       207 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~--~~~-----------------------  255 (350)
T 1rdq_E          207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVS--GKV-----------------------  255 (350)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CCC-----------------------
T ss_pred             HHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHc--CCC-----------------------
Confidence            999999999999999999999999999999997543      3333333332  110                       


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                       ..+...+..+.+||.+||+.||.+|++     ++++++||||++
T Consensus       256 -----------------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          256 -----------------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             -----------------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             -----------------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence                             122334567789999999999999998     999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=4.2e-31  Score=210.76  Aligned_cols=166  Identities=22%  Similarity=0.338  Sum_probs=128.9

Q ss_pred             ccccccccccccccccccC-CCcceEEeecCCceecc--CCCCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSL-PPFLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|+||+||+++ .++.+||+|||+|+...  ......+||+.|+|||++.+.. ++.++||||+||++++++
T Consensus       157 LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence            6677789999999999997 68999999999998764  3345568899999999998864 999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+++..+.+.+|.++.+..........       ....+......+...      .+...+.+
T Consensus       237 ~g~~pf~~~~------~~~~~~~i~~~~g~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~  297 (383)
T 3eb0_A          237 LGKPLFSGET------SIDQLVRIIQIMGTPTKEQMIRMNPHYT-------EVRFPTLKAKDWRKI------LPEGTPSL  297 (383)
T ss_dssp             HSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCTTC---------CCCCCCCCCCHHHH------SCTTCCHH
T ss_pred             hCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhCcccc-------cccCCccCcccHHhh------CCCCCCHH
Confidence            9999998655      6889999999999988775543221100       001111112222111      23445667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+||.+||++||++|||+.|+|+||||+
T Consensus       298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~  326 (383)
T 3eb0_A          298 AIDLLEQILRYEPDLRINPYEAMAHPFFD  326 (383)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSGGGH
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCHHHH
Confidence            89999999999999999999999999995

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=9.2e-31  Score=206.90  Aligned_cols=170  Identities=19%  Similarity=0.301  Sum_probs=129.3

Q ss_pred             cc--ccccccccccccccccCC-CcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHH
Q psy16751         29 CW--VDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~--~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~  102 (214)
                      +|  ..+++|+|+||+||+++. ++.+||+|||+++.....  .....||+.|+|||++.+.. ++.++||||+||++++
T Consensus       145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  224 (360)
T 3e3p_A          145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAE  224 (360)
T ss_dssp             HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            55  667899999999999986 899999999999876532  34557899999999998765 8999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..||.+.+      ...++..+.+..+.++.+..............       .......+....   .......+
T Consensus       225 ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~  288 (360)
T 3e3p_A          225 MMLGEPIFRGDN------SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDL-------YNSKGIPWSNVF---SDHSLKDA  288 (360)
T ss_dssp             HHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGG-------GCCCCCCHHHHT---TTCCCTTH
T ss_pred             HHhCCCCcCCCC------hHHHHHHHHHHcCCCCHHHHHhcccchhhccc-------cccccCCccccc---chhhcccc
Confidence            999999998655      67888899999999888776543322111110       000011111111   01223456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .++.+||.+||++||.+|||+.|+|+||||++
T Consensus       289 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  320 (360)
T 3e3p_A          289 KEAYDLLSALLQYLPEERMKPYEALCHPYFDE  320 (360)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence            78899999999999999999999999999963

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=4.3e-31  Score=214.14  Aligned_cols=167  Identities=20%  Similarity=0.270  Sum_probs=126.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccC---CCcceEEeecCCceeccCC---CCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSL---PPFLFDIGTYRNACWVDKH---FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~---~~~~~kl~Dfg~a~~~~~~---~~~~~~   72 (214)
                      +|++++.....+...++...+.  +..  .+|..+++|+|+||+||++.   .++.+||+|||+|......   ....+|
T Consensus        96 ~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~g  175 (444)
T 3soa_A           96 ELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG  175 (444)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCS
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccC
Confidence            5677777777776666644322  222  36777789999999999997   4688999999999876533   334689


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+.+|+.++||||+||+++++++|.+||.+.+      ..+....+......++..              
T Consensus       176 t~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~--------------  235 (444)
T 3soa_A          176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED------QHRLYQQIKAGAYDFPSP--------------  235 (444)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCCCTT--------------
T ss_pred             CcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhCCCCCCcc--------------
Confidence            999999999998899999999999999999999999997544      334444333211111100              


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                              .....+.++.+|+.+||+.||++|||+.|+|+||||+
T Consensus       236 ------------------------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          236 ------------------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             ------------------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             ------------------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence                                    0123456788999999999999999999999999995

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=3.1e-31  Score=208.02  Aligned_cols=164  Identities=15%  Similarity=0.180  Sum_probs=123.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++....  +.  ..+|.++++|+|+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~  170 (337)
T 1o6l_A           91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  170 (337)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChh
Confidence            4555665555555555433211  12  23677778999999999999999999999999998642   23455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++|+||+||++++|++|..||.+.+      .......+..  +.                     
T Consensus       171 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~--~~---------------------  221 (337)
T 1o6l_A          171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILM--EE---------------------  221 (337)
T ss_dssp             GCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CC---------------------
T ss_pred             hCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHc--CC---------------------
Confidence            999999999899999999999999999999999997533      2333333321  11                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+||.+||+.||++|+     +++|+++||||++
T Consensus       222 -------------------~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          222 -------------------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence                               012234456778999999999999999     8999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.1e-31  Score=208.83  Aligned_cols=167  Identities=20%  Similarity=0.293  Sum_probs=126.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++....   .....+||+.|+|||++.+. .++.++||||+||+++++
T Consensus       127 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  206 (346)
T 1ua2_A          127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL  206 (346)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHH
Confidence            36677789999999999999999999999999987643   23456899999999999875 489999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|.++|.+.+      ..+++..+....+.++...+........+....       .........       .....+.
T Consensus       207 l~g~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-------~~~~~~~  266 (346)
T 1ua2_A          207 LLRVPFLPGDS------DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK-------SFPGIPLHH-------IFSAAGD  266 (346)
T ss_dssp             HHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC-------CCCCCCHHH-------HCTTCCH
T ss_pred             HHCCCCCCCCC------HHHHHHHHHHHcCCCChhhhhhhccCccccccc-------ccCCCChHH-------hhccCCH
Confidence            99999998655      678888888888887665443322221111100       000011100       1134456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.+||.+||+.||++|||++|+|+||||++
T Consensus       267 ~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          267 DLLDLIQGLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence            7899999999999999999999999999974

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=1.5e-32  Score=218.25  Aligned_cols=175  Identities=22%  Similarity=0.340  Sum_probs=118.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++.....  ....+||+.|+|||++.+.+++.++||||+||+++++++
T Consensus       142 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  221 (371)
T 2xrw_A          142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK  221 (371)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh
Confidence            366777899999999999999999999999999876543  345689999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhc-C----CChh
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY-N----WTPE  180 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~  180 (214)
                      |..||.+.+      ..+++..+.+..|.+.+.+..........+..     ..+............... .    ....
T Consensus       222 g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (371)
T 2xrw_A          222 GGVLFPGTD------HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE-----NRPKYAGYSFEKLFPDVLFPADSEHNKL  290 (371)
T ss_dssp             SSCSSCCSS------HHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHH-----SSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred             CCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHh-----hCccccccchhhhcccccCccccccccc
Confidence            999998655      67788888888888777665433211110000     001111111111000000 0    0122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+..+.+||.+||++||++|||++|+|+||||+
T Consensus       291 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  323 (371)
T 2xrw_A          291 KASQARDLLSKMLVIDASKRISVDEALQHPYIN  323 (371)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             ccHHHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence            366889999999999999999999999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=4e-31  Score=208.57  Aligned_cols=164  Identities=13%  Similarity=0.152  Sum_probs=124.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~  186 (353)
T 2i0e_A          107 DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD  186 (353)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCcc
Confidence            5666666655655555533211  11  23677788999999999999999999999999998642   23455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+++.++|+||+||++++|++|..||.+.+      ..+....+...  .                     
T Consensus       187 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~--~---------------------  237 (353)
T 2i0e_A          187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEH--N---------------------  237 (353)
T ss_dssp             GCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--C---------------------
T ss_pred             ccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHhC--C---------------------
Confidence            999999999899999999999999999999999997544      33444444321  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+||.+||+.||.+|++     ++++++||||++
T Consensus       238 -------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          238 -------------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence                               0122344567789999999999999994     699999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=5.8e-31  Score=208.62  Aligned_cols=170  Identities=25%  Similarity=0.364  Sum_probs=128.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+++.....      ....+||+.|+|||++.+. .++.++||||+||++
T Consensus       143 ~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  222 (364)
T 3qyz_A          143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  222 (364)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHH
T ss_pred             HHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHH
Confidence            367777899999999999999999999999999876432      3445899999999998765 489999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||.+.+      ..+++..+...+|.++.+.............    ....+......+..       ....
T Consensus       223 ~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------~~~~  285 (364)
T 3qyz_A          223 AEMLSNRPIFPGKH------YLDQLNHILGILGSPSQEDLNCIINLKARNY----LLSLPHKNKVPWNR-------LFPN  285 (364)
T ss_dssp             HHHHHSSCSSCCSS------GGGHHHHHHHHHCSCCHHHHHTCCCHHHHHH----HHTSCCCCCCCHHH-------HCTT
T ss_pred             HHHHHCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHH----HHhcCCccCCCHHH-------hCCC
Confidence            99999999998655      6788889999999988876654332211000    00111111111111       1133


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.++.+||.+||++||++|||++|+|+||||++
T Consensus       286 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence            4567889999999999999999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=4e-31  Score=209.24  Aligned_cols=171  Identities=18%  Similarity=0.247  Sum_probs=120.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++....  ......||+.|+|||++.+ ..++.++||||+||++++++
T Consensus       149 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  228 (362)
T 3pg1_A          149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF  228 (362)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred             HHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH
Confidence            36777789999999999999999999999999985543  2344588999999999988 56899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+.+..+....+.++.....................   .........       ..+..+..
T Consensus       229 ~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~  292 (362)
T 3pg1_A          229 NRKALFRGST------FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLS---NVPARAWTA-------VVPTADPV  292 (362)
T ss_dssp             HSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCC---CCCCCCHHH-------HSTTSCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcc---cCChhhHHh-------hCCCCCHH
Confidence            9999998655      6788888999888887765433222111000000000   111111110       12344567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||++||++|||+.|+|+||||++
T Consensus       293 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          293 ALDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence            889999999999999999999999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=5.8e-31  Score=203.21  Aligned_cols=141  Identities=20%  Similarity=0.227  Sum_probs=112.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.++++|+|+||.||+++.++.+||+|||++......   ....+||+.|+|||++.+..++.++||||+||++++++
T Consensus       131 ~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  210 (297)
T 3fxz_A          131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI  210 (297)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHH
T ss_pred             HHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            367777899999999999999999999999999876532   34458999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||...+      ....+..+... +.+..                                      ..+...+..
T Consensus       211 ~g~~pf~~~~------~~~~~~~~~~~-~~~~~--------------------------------------~~~~~~~~~  245 (297)
T 3fxz_A          211 EGEPPYLNEN------PLRALYLIATN-GTPEL--------------------------------------QNPEKLSAI  245 (297)
T ss_dssp             HSSCTTTTSC------HHHHHHHHHHH-CSCCC--------------------------------------SCGGGSCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHhC-CCCCC--------------------------------------CCccccCHH
Confidence            9999997543      33333333221 11100                                      012344567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+||.+||+.||++|||++|+|+||||+
T Consensus       246 ~~~li~~~l~~dp~~Rps~~ell~h~~~~  274 (297)
T 3fxz_A          246 FRDFLNRCLEMDVEKRGSAKELLQHQFLK  274 (297)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhhChhhc
Confidence            78999999999999999999999999996

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=8.7e-31  Score=203.16  Aligned_cols=170  Identities=26%  Similarity=0.393  Sum_probs=121.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|..+++|+|++|.||+++.++.+||+|||++......   ....+||+.|+|||++.+ ..++.++||||+||+++++
T Consensus       117 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  196 (311)
T 4agu_A          117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAEL  196 (311)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHH
Confidence            366677899999999999999999999999999876532   345588999999999987 4689999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      ..+.+..+.+..+...+...........+ ...    ..+.........   ..   .+..+.
T Consensus       197 ~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~---~~---~~~~~~  259 (311)
T 4agu_A          197 LSGVPLWPGKS------DVDQLYLIRKTLGDLIPRHQQVFSTNQYF-SGV----KIPDPEDMEPLE---LK---FPNISY  259 (311)
T ss_dssp             HHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHHHHTCGGG-TTC----CCCCCSSCCCHH---HH---CTTCCH
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHhccccccccccccccccc-ccC----cCCCccccchhh---hh---cccccH
Confidence            99999998655      67778888888888766544322221111 100    001111000000   00   123456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.+|+.+||++||++|||++|+|+||||++
T Consensus       260 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          260 PALGLLKGCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence            7889999999999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=2.9e-31  Score=208.79  Aligned_cols=164  Identities=15%  Similarity=0.169  Sum_probs=123.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++....  +.  ..+|.++++|+|+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus       104 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~  183 (345)
T 1xjd_A          104 DLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPD  183 (345)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGG
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcc
Confidence            4566665555555444433211  11  23677778999999999999999999999999998642   23455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++|+||+||++++|++|..||.+.+      ..+....+..  +.+                    
T Consensus       184 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~--~~~--------------------  235 (345)
T 1xjd_A          184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIRM--DNP--------------------  235 (345)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CCC--------------------
T ss_pred             cCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHh--CCC--------------------
Confidence            999999999999999999999999999999999997543      3333333322  110                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHH-HHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA-DCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~-e~l~hp~f~~  214 (214)
                                          ..+...+.++.+||.+||+.||++|||+. ++++||||++
T Consensus       236 --------------------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          236 --------------------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             --------------------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             --------------------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence                                01233455778999999999999999998 9999999974

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=6.7e-31  Score=213.45  Aligned_cols=164  Identities=16%  Similarity=0.178  Sum_probs=121.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhhc--ccc-cccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRNA--CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~~--~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~   74 (214)
                      +|.+++.....+....++....  +..+  +|. .+++|+|+||+||+++.++.+||+|||+|+...   ......+||+
T Consensus       234 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~  313 (446)
T 4ejn_A          234 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  313 (446)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCc
Confidence            4555555555555554433211  2333  454 557999999999999999999999999997642   2345568999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||++.+..|+.++||||+||++++|++|..||.+.+      .......+...  .                    
T Consensus       314 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~--~--------------------  365 (446)
T 4ejn_A          314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILME--E--------------------  365 (446)
T ss_dssp             GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--C--------------------
T ss_pred             cccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHHhC--C--------------------
Confidence            9999999999999999999999999999999999997543      23333333211  0                    


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                          ...+...+.++.+||.+||+.||.+||     |++|+++||||++
T Consensus       366 --------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          366 --------------------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             --------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             --------------------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence                                012234456778999999999999999     9999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=9.7e-31  Score=206.46  Aligned_cols=170  Identities=25%  Similarity=0.359  Sum_probs=125.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++..........||+.|+|||++.+ ..++.++||||+||+++++++|
T Consensus       141 ~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  220 (353)
T 3coi_A          141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG  220 (353)
T ss_dssp             HHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHS
T ss_pred             HHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhC
Confidence            367777899999999999999999999999999877766666789999999999987 5789999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.+.+      ..+++..+.+..|.++.++............    ....+........       ......+..+.
T Consensus       221 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~  283 (353)
T 3coi_A          221 KTLFKGKD------YLDQLTQILKVTGVPGTEFVQKLNDKAAKSY----IQSLPQTPRKDFT-------QLFPRASPQAA  283 (353)
T ss_dssp             SCSSBSSC------HHHHHHHHHHHHCBCCHHHHTTCSCHHHHHH----HHTSCBCSSCCTT-------TTCTTSCHHHH
T ss_pred             CCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHHhhHHHHHH----HHhCcCCCCccHH-------HhcCCcCHHHH
Confidence            99998655      5788888999999988877654332210000    0000000000000       01234566789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +||.+||+.||++|||++|+|+||||+.
T Consensus       284 ~li~~~L~~dp~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          284 DLLEKMLELDVDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            9999999999999999999999999973

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.6e-31  Score=208.50  Aligned_cols=168  Identities=18%  Similarity=0.239  Sum_probs=123.8

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hh--hcccccccccccccccccccCC--CcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.... .+...++...+.  +.  ..+|.++++|+|+||+||+++.  ++.+||+|||++......  ....+||
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  166 (321)
T 1tki_A           87 DIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA  166 (321)
T ss_dssp             BHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESC
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCC
Confidence            5666665543 355444433211  22  2367777899999999999987  789999999999876432  3345799


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+..++.++||||+||+++++++|..||.+.+      ..+.+..+......++...              
T Consensus       167 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~--------------  226 (321)
T 1tki_A          167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYTFDEEA--------------  226 (321)
T ss_dssp             GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCCCHHH--------------
T ss_pred             hhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHcCCCCCChhh--------------
Confidence            99999999998889999999999999999999999997544      3444444433211111110              


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                              ....+.++.+|+.+||+.||++|||+.|+|+||||++
T Consensus       227 ------------------------~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  263 (321)
T 1tki_A          227 ------------------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             ------------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             ------------------------hccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhcc
Confidence                                    0234557789999999999999999999999999863

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=1e-30  Score=205.84  Aligned_cols=171  Identities=19%  Similarity=0.183  Sum_probs=122.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus        96 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~  175 (345)
T 3a8x_A           96 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN  175 (345)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGG
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCcc
Confidence            4556666555555555533211  12  23677778999999999999999999999999998642   23455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCC--CCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY--TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      |+|||++.+..|+.++|+||+||++++|++|..||........  ......+......                      
T Consensus       176 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~----------------------  233 (345)
T 3a8x_A          176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE----------------------  233 (345)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH----------------------
T ss_pred             ccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc----------------------
Confidence            9999999999999999999999999999999999964321110  0011111111100                      


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH------HHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA------ADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~------~e~l~hp~f~~  214 (214)
                                         .....+...+..+.+||.+||+.||++|||+      +|+++||||++
T Consensus       234 -------------------~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          234 -------------------KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             -------------------CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             -------------------CCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence                               0111234455678899999999999999995      89999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=7.6e-31  Score=207.78  Aligned_cols=167  Identities=21%  Similarity=0.264  Sum_probs=123.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCC---cceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPP---FLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~---~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.....+...++...+.  +..  .+|.++++|+|+||+||++...   +.+||+|||++......  ....+||
T Consensus       114 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt  193 (362)
T 2bdw_A          114 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT  193 (362)
T ss_dssp             BHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSC
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCC
Confidence            5667777666666665544222  222  3677778999999999999764   46999999999877533  3456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+..|+.++||||+||+++++++|.+||.+.+      .......+.......+..               
T Consensus       194 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~---------------  252 (362)
T 2bdw_A          194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGAYDYPSP---------------  252 (362)
T ss_dssp             TTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTT---------------
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCcc---------------
Confidence            99999999999899999999999999999999999997543      333333332211111100               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                             .....+.++.+||.+||+.||++|||+.|+|+||||+
T Consensus       253 -----------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          253 -----------------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             -----------------------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             -----------------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence                                   0123456778999999999999999999999999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=1.3e-31  Score=212.86  Aligned_cols=147  Identities=12%  Similarity=0.091  Sum_probs=109.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc--CCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN--AGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+|+..+.......+|+.|+|||++.+  ..++.++||||+||+++++++
T Consensus       209 ~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt  288 (371)
T 3q60_A          209 NLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC  288 (371)
T ss_dssp             HHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence            366777899999999999999999999999999988765545677799999999987  579999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.+.....                      .........  .....    ...           ........+..+
T Consensus       289 g~~Pf~~~~~~~----------------------~~~~~~~~~--~~~~~----~~~-----------~~~~~~~~~~~~  329 (371)
T 3q60_A          289 LFLPFGLVTPGI----------------------KGSWKRPSL--RVPGT----DSL-----------AFGSCTPLPDFV  329 (371)
T ss_dssp             SSCSTTBCCTTC----------------------TTCCCBCCT--TSCCC----CSC-----------CCTTSSCCCHHH
T ss_pred             CCCCCCCcCccc----------------------ccchhhhhh--hhccc----ccc-----------chhhccCCCHHH
Confidence            999997543110                      000000000  00000    000           000113445678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+||.+||+.||++|||+.++|+||||+
T Consensus       330 ~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          330 KTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             HHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence            8999999999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=5.3e-30  Score=199.88  Aligned_cols=164  Identities=21%  Similarity=0.310  Sum_probs=125.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|.++++|+|+++.||+++.++.+||+|||+++....  ......|++.|+|||++.+..++.++||||+||+++++++|
T Consensus       136 lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  215 (326)
T 1blx_A          136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR  215 (326)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcC
Confidence            6777789999999999999999999999999986643  23456889999999999998999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc-cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE-FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      ..||.+.+      ....+..+....+.++............ .+..         .......       ......+..+
T Consensus       216 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-------~~~~~~~~~~  273 (326)
T 1blx_A          216 KPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS---------KSAQPIE-------KFVTDIDELG  273 (326)
T ss_dssp             SCSCCCSS------HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCC---------CCCCCGG-------GTCCSCCHHH
T ss_pred             CCCCCCCC------HHHHHHHHHHHcCCCCcccCccccccchhhhcc---------cCcchhh-------hccccCCHHH
Confidence            99998655      5777888888888766543322211110 0000         0000000       0123455678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+|+.+||+.||++|||+.|+|+||||++
T Consensus       274 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          274 KDLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            89999999999999999999999999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=1.2e-30  Score=221.22  Aligned_cols=164  Identities=13%  Similarity=0.143  Sum_probs=126.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++..+.  +.  ..+|..+++|||+||+||+++.++.+||+|||+|+...   ......+||+.
T Consensus       428 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~  507 (674)
T 3pfq_A          428 DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD  507 (674)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSS
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCc
Confidence            5666666666665555543211  11  23677788999999999999999999999999998642   23455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++|+||+||+++||++|.+||.+.+      ..+.+..+....                       
T Consensus       508 Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~-----------------------  558 (674)
T 3pfq_A          508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHN-----------------------  558 (674)
T ss_dssp             SCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHSSC-----------------------
T ss_pred             ccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCC-----------------------
Confidence            999999999999999999999999999999999998644      344444443210                       


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH-----HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA-----ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~-----~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+||.+||+.||++|+++     +|+++||||++
T Consensus       559 -------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          559 -------------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             -------------------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence                               11234456678999999999999999997     99999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=3.1e-30  Score=201.35  Aligned_cols=167  Identities=14%  Similarity=0.135  Sum_probs=121.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~   73 (214)
                      +|.+++.....+...++...+.  +.  ..+|..+++|+|+|+.||+++.++.+||+|||+++....     .....+||
T Consensus        91 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt  170 (323)
T 3tki_A           91 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT  170 (323)
T ss_dssp             EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSC
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccC
Confidence            5667776666666555544222  22  236777789999999999999999999999999986532     23456899


Q ss_pred             CcccchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         74 RQYRSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        74 ~~y~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      +.|+|||++.+..+ +.++||||+||+++++++|..||.....     ........... ....                
T Consensus       171 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~~~~~~-~~~~----------------  228 (323)
T 3tki_A          171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-----SCQEYSDWKEK-KTYL----------------  228 (323)
T ss_dssp             GGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT-----TSHHHHHHHTT-CTTS----------------
T ss_pred             cCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHhcc-cccC----------------
Confidence            99999999998875 6789999999999999999999975432     11111111100 0000                


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             ......+..+.+|+.+||+.||++|||++|+++||||++
T Consensus       229 -----------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          229 -----------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             -----------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             -----------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence                                   001234556789999999999999999999999999973

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=1.2e-30  Score=207.42  Aligned_cols=142  Identities=20%  Similarity=0.272  Sum_probs=112.8

Q ss_pred             cccccccccccccccccc--CCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRS--LPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~--~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|...++|+|+||.||++  ..++.+||+|||+++....  .....+||+.|+|||++.+..++.++||||+||++++|+
T Consensus       203 LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  282 (373)
T 2x4f_A          203 MHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL  282 (373)
T ss_dssp             HHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH
T ss_pred             HHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH
Confidence            666778999999999998  5678999999999987753  234557999999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+.+..+......++..                                      .....+.+
T Consensus       283 tg~~pf~~~~------~~~~~~~i~~~~~~~~~~--------------------------------------~~~~~~~~  318 (373)
T 2x4f_A          283 SGLSPFLGDN------DAETLNNILACRWDLEDE--------------------------------------EFQDISEE  318 (373)
T ss_dssp             HSSCTTCCSS------HHHHHHHHHHTCCCSCSG--------------------------------------GGTTSCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHhccCCCChh--------------------------------------hhccCCHH
Confidence            9999997644      455555554321111110                                      00233457


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||+.||.+|||+.|+|+||||++
T Consensus       319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          319 AKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            789999999999999999999999999863

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=2.3e-30  Score=204.15  Aligned_cols=169  Identities=21%  Similarity=0.327  Sum_probs=114.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCC---CcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|.+++.....+...++...+.  +..  .+|..+++|+|++|.||++..   ++.+||+|||+++.....  .....||
T Consensus       134 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  213 (349)
T 2w4o_A          134 ELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGT  213 (349)
T ss_dssp             BHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------C
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCC
Confidence            5666776666655555543221  222  366677899999999999975   889999999999876432  3456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+..++.++||||+||+++++++|..||.....     ....+..+.......+.                
T Consensus       214 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~i~~~~~~~~~----------------  272 (349)
T 2w4o_A          214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG-----DQFMFRRILNCEYYFIS----------------  272 (349)
T ss_dssp             GGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-----HHHHHHHHHTTCCCCCT----------------
T ss_pred             CCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-----cHHHHHHHHhCCCccCC----------------
Confidence            999999999998999999999999999999999999975431     12222222211000000                


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                            ......+.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       273 ----------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  311 (349)
T 2w4o_A          273 ----------------------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG  311 (349)
T ss_dssp             ----------------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             ----------------------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence                                  011234557789999999999999999999999999974

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2.3e-31  Score=208.67  Aligned_cols=163  Identities=18%  Similarity=0.316  Sum_probs=122.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|++++.....+...++...+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||++.....  .....+||+.|
T Consensus        94 ~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y  173 (336)
T 3h4j_B           94 ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNY  173 (336)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTT
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCc
Confidence            4667777777766666644222  22  236777789999999999999999999999999987643  34556899999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+..+ +.++||||+||+++++++|..||.......                     ...... .         
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---------------------~~~~i~-~---------  222 (336)
T 3h4j_B          174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---------------------LFKKVN-S---------  222 (336)
T ss_dssp             SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---------------------CBCCCC-S---------
T ss_pred             CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---------------------HHHHHH-c---------
Confidence            99999998876 689999999999999999999996432100                     000000 0         


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                       .....+...+..+.+||.+||+.||.+|||++|+++||||+
T Consensus       223 -----------------~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  263 (336)
T 3h4j_B          223 -----------------CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN  263 (336)
T ss_dssp             -----------------SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred             -----------------CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhc
Confidence                             00112344556788999999999999999999999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=7.5e-30  Score=198.90  Aligned_cols=168  Identities=20%  Similarity=0.330  Sum_probs=124.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc----ceEEeecCCceeccCC--CCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF----LFDIGTYRNACWVDKH--FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~----~~kl~Dfg~a~~~~~~--~~~~~~   72 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|++|.||++..++    .+||+|||++......  .....|
T Consensus       101 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~g  180 (321)
T 2a2a_A          101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG  180 (321)
T ss_dssp             BHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCS
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCC
Confidence            5666666655555555433211  22  236677789999999999998877    7999999999877543  345579


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+..++.++||||+||+++++++|..||.+.+      ..+.+..+.......+...             
T Consensus       181 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~-------------  241 (321)
T 2a2a_A          181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITSVSYDFDEEF-------------  241 (321)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCHHH-------------
T ss_pred             CCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcccccChhh-------------
Confidence            999999999998899999999999999999999999997543      3344443332211111110             


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                               ....+..+.+|+.+||+.||++|||+.|+++||||++
T Consensus       242 -------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          242 -------------------------FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             -------------------------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             -------------------------hcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence                                     0223456789999999999999999999999999973

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=1.2e-30  Score=201.72  Aligned_cols=142  Identities=17%  Similarity=0.103  Sum_probs=96.2

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcC------CCCcchhhHHHHHH
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINA------GYDCSADIWSVACM   99 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~Diws~G~~   99 (214)
                      .++|||+||+|||++.++.+||+|||+|+.....       ....+||+.|||||++.+.      .|+.++||||+||+
T Consensus       128 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv  207 (303)
T 3hmm_A          128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV  207 (303)
T ss_dssp             CEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred             CEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence            6799999999999999999999999999876432       2235899999999999864      36679999999999


Q ss_pred             HHHHhhCCCCCCCCCCCC--C------CCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHH
Q psy16751        100 AFELATGDYLFEPHAGDT--Y------TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL  171 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~--~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (214)
                      ++||++|.++|.......  .      ....+.+......-+.                        .|.... .     
T Consensus       208 l~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------rp~~p~-~-----  257 (303)
T 3hmm_A          208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL------------------------RPNIPN-R-----  257 (303)
T ss_dssp             HHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC------------------------CCCCCG-G-----
T ss_pred             HHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccC------------------------CCCCCc-c-----
Confidence            999999988775432111  0      0011111111100000                        000000 0     


Q ss_pred             HhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       172 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                          ..+.+....+.+|+.+||+.||++|||+.|+++
T Consensus       258 ----~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          258 ----WQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             ----GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ----ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence                011334567889999999999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=2.3e-30  Score=205.62  Aligned_cols=164  Identities=14%  Similarity=0.116  Sum_probs=124.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|++++.....+....++..+.  +.  ..+|.++++|+|+||+||+++.++.+||+|||+++...   ......+||+.
T Consensus       125 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~  204 (373)
T 2r5t_A          125 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE  204 (373)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCC
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCcc
Confidence            4566666655555555533211  11  23677778999999999999999999999999998642   23455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..|+.++|+||+||++++|++|..||.+.+      ..+....+...  .                     
T Consensus       205 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~--~---------------------  255 (373)
T 2r5t_A          205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNK--P---------------------  255 (373)
T ss_dssp             CCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHHHS--C---------------------
T ss_pred             ccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHhc--c---------------------
Confidence            999999999999999999999999999999999997543      33444433321  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCH----HHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATA----ADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~----~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+||.+||+.||.+|+++    .++++||||++
T Consensus       256 -------------------~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          256 -------------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             -------------------CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             -------------------cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence                               01223445677899999999999999986    69999999974

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=2.4e-30  Score=202.27  Aligned_cols=164  Identities=15%  Similarity=0.194  Sum_probs=119.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~   75 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+||.||+++.++.+||+|||+++...   ......+||+.
T Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  186 (327)
T 3a62_A          107 ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE  186 (327)
T ss_dssp             EHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCT
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcC
Confidence            4555555555554444432211  11  23677778999999999999999999999999997543   22345689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||.+.+      ....+..+....                       
T Consensus       187 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~-----------------------  237 (327)
T 3a62_A          187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILKCK-----------------------  237 (327)
T ss_dssp             TSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTC-----------------------
T ss_pred             ccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCC-----------------------
Confidence            999999999899999999999999999999999997543      334444433210                       


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+||.+||+.||++||     +++|+++||||++
T Consensus       238 -------------------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          238 -------------------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence                               012233456778999999999999999     8899999999974

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=1e-30  Score=204.31  Aligned_cols=175  Identities=19%  Similarity=0.258  Sum_probs=119.8

Q ss_pred             cccccccccccccccccccCCCc-ceEEeecCCceeccC--CCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|+||.||+++.++ .+||+|||+|+....  ......|++.|+|||++.+ ..++.++||||+||+++++
T Consensus       145 ~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  224 (330)
T 3nsz_A          145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM  224 (330)
T ss_dssp             HHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHH
Confidence            36677789999999999998766 899999999987643  3455689999999999988 4689999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHh-hccCC-ccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRII-QSGHR-SSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++|..||.....     ..+++..+.+.++.....-. ..... ....+..  ........   .+....  ....+...
T Consensus       225 l~g~~p~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~--~~~~~~~~  292 (330)
T 3nsz_A          225 IFRKEPFFHGHD-----NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND--ILGRHSRK---RWERFV--HSENQHLV  292 (330)
T ss_dssp             HHTCSSSSCCSS-----HHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHH--HHCCCCCC---CGGGGC--CTTTGGGC
T ss_pred             HhCCCCcccCCc-----hHHHHHHHHHhcCCchhhhHHHHhccccccchhh--hhhhcccc---chhhhc--cccccccC
Confidence            999999864332     56777777776664322111 10000 0000000  00000000   000000  00112335


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.++.+||.+||++||++|||++|+|+||||++
T Consensus       293 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          293 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence            678899999999999999999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.96  E-value=2.6e-30  Score=208.99  Aligned_cols=169  Identities=14%  Similarity=0.230  Sum_probs=122.7

Q ss_pred             cchhhhhcc-CchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcC
Q psy16751          3 SIFNFFVAF-GSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~-~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~   73 (214)
                      +|++++... ..+....++..+.  +.  ..+|...++|||+||+||+++.++.+||+|||+|+.....    ....+||
T Consensus       160 ~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT  239 (437)
T 4aw2_A          160 DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT  239 (437)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSC
T ss_pred             cHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCC
Confidence            566666653 4444444432111  11  2367777899999999999999999999999999876432    2345899


Q ss_pred             CcccchHHHh-----cCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc
Q psy16751         74 RQYRSLEVLI-----NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE  148 (214)
Q Consensus        74 ~~y~aPE~~~-----~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  148 (214)
                      +.|+|||++.     +..|+.++||||+||+++||++|..||.+.+      ..+...++....+.++            
T Consensus       240 ~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~------------  301 (437)
T 4aw2_A          240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQ------------  301 (437)
T ss_dssp             GGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCC------------
T ss_pred             cCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHhhhhcccccc------------
Confidence            9999999998     3458999999999999999999999998644      4555555543211000            


Q ss_pred             cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                                .+               ......+.++.+||.+||+.+|++  |++++|+++||||++
T Consensus       302 ----------~p---------------~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          302 ----------FP---------------TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             ----------CC---------------SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             ----------CC---------------cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence                      00               001234567789999999999888  999999999999974

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=2.4e-30  Score=206.42  Aligned_cols=168  Identities=15%  Similarity=0.267  Sum_probs=122.0

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hhh--cccccccccccccccccccCC--CcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.... .+...++...+.  +..  .+|.++++|+|+||+||+++.  .+.+||+|||+++.....  .....||
T Consensus       134 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt  213 (387)
T 1kob_A          134 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT  213 (387)
T ss_dssp             BHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSS
T ss_pred             cHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccC
Confidence            4566665443 344444433211  222  366777899999999999964  578999999999877533  2345799


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+..++.++||||+||++++|++|..||.+.+      ..+.+..+......++.                
T Consensus       214 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~~~~~~~~----------------  271 (387)
T 1kob_A          214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWEFDE----------------  271 (387)
T ss_dssp             GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCCCCS----------------
T ss_pred             CCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCc----------------
Confidence            99999999999899999999999999999999999997544      34444443321101000                


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                            ......+.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       272 ----------------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (387)
T 1kob_A          272 ----------------------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  310 (387)
T ss_dssp             ----------------------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             ----------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence                                  011234567789999999999999999999999999973

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=3.1e-31  Score=211.08  Aligned_cols=132  Identities=11%  Similarity=0.058  Sum_probs=106.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-----------CCCcchhhHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-----------GYDCSADIWSVA   97 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Diws~G   97 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+|+..+......+| +.|+|||++.+.           .++.++||||+|
T Consensus       222 LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG  300 (377)
T 3byv_A          222 LHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG  300 (377)
T ss_dssp             HHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred             HHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence            67777899999999999999999999999999987766666788 999999999988           799999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      |++++|++|..||...+...                . .....                                   ..
T Consensus       301 ~il~elltg~~Pf~~~~~~~----------------~-~~~~~-----------------------------------~~  328 (377)
T 3byv_A          301 LVIYWIWCADLPITKDAALG----------------G-SEWIF-----------------------------------RS  328 (377)
T ss_dssp             HHHHHHHHSSCCC------C----------------C-SGGGG-----------------------------------SS
T ss_pred             HHHHHHHHCCCCCccccccc----------------c-hhhhh-----------------------------------hh
Confidence            99999999999996432100                0 00000                                   00


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ....+..+.+||.+||+.||++|||+.|+|+||||+
T Consensus       329 ~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          329 CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred             ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence            123345678999999999999999999999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=5.2e-30  Score=199.03  Aligned_cols=136  Identities=23%  Similarity=0.235  Sum_probs=104.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|...++|+|+||+||+++.++.+||+|||++......  .....||+.|+|||++.+ .++.++||||+||+++++++|
T Consensus       173 LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g  251 (311)
T 3p1a_A          173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACN  251 (311)
T ss_dssp             HHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHT
T ss_pred             HHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhC
Confidence            66677899999999999999999999999999877543  334579999999999876 799999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..+|.+         ......+..  +..+..+                                      +...+..+.
T Consensus       252 ~~~~~~---------~~~~~~~~~--~~~~~~~--------------------------------------~~~~~~~l~  282 (311)
T 3p1a_A          252 MELPHG---------GEGWQQLRQ--GYLPPEF--------------------------------------TAGLSSELR  282 (311)
T ss_dssp             CCCCSS---------HHHHHHHTT--TCCCHHH--------------------------------------HTTSCHHHH
T ss_pred             CCCCCC---------ccHHHHHhc--cCCCccc--------------------------------------ccCCCHHHH
Confidence            777652         121111110  1111110                                      123456778


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +|+.+||++||++|||++|+|+||||++
T Consensus       283 ~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          283 SVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            9999999999999999999999999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.96  E-value=2.6e-30  Score=206.54  Aligned_cols=178  Identities=19%  Similarity=0.199  Sum_probs=107.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc----------CCCCCCCcCCcccchHHHhc--CCCCcchhhHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD----------KHFTEDVQTRQYRSLEVLIN--AGYDCSADIWS   95 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~----------~~~~~~~~~~~y~aPE~~~~--~~~~~~~Diws   95 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||.+....          ......+||+.|+|||++.+  ..|+.++||||
T Consensus       143 ~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  222 (389)
T 3gni_B          143 YIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS  222 (389)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHH
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHH
Confidence            3677778999999999999999999999999986542          12233488999999999998  57999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc-------ccccccCccccCCCCCCCchh
Q psy16751         96 VACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-------EFFTKKGELRHIPGLKPWDLY  168 (214)
Q Consensus        96 ~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  168 (214)
                      +||+++++++|..||.+.+.      ...+..+..  +..+...........       ................... .
T Consensus       223 lG~il~el~~g~~pf~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  293 (389)
T 3gni_B          223 VGITACELANGHVPFKDMPA------TQMLLEKLN--GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRP-S  293 (389)
T ss_dssp             HHHHHHHHHHSSCTTTTCCS------TTHHHHC-----------------------------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCH------HHHHHHHhc--CCCCccccccccccccccccccccccccccccccccCcccc-c
Confidence            99999999999999975442      222221111  111100000000000       0000000000000000000 0


Q ss_pred             hHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        169 SVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .........+...+..+.+||.+||++||++|||++|+|+||||++
T Consensus       294 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          294 NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             ------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             cCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence            0000011133455678899999999999999999999999999963

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=5.7e-30  Score=203.90  Aligned_cols=167  Identities=15%  Similarity=0.245  Sum_probs=122.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+||.||+++.++.+||+|||+|.....  .....+||+.|
T Consensus       101 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y  180 (384)
T 4fr4_A          101 DLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPY  180 (384)
T ss_dssp             EHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccc
Confidence            4555555555555555543221  12  236777789999999999999999999999999987643  34566899999


Q ss_pred             cchHHHhc---CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         77 RSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        77 ~aPE~~~~---~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +|||++.+   .+|+.++||||+||++++|++|..||.......   .......+...                      
T Consensus       181 ~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~~~----------------------  235 (384)
T 4fr4_A          181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFETT----------------------  235 (384)
T ss_dssp             CCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHHHC----------------------
T ss_pred             cCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhhc----------------------
Confidence            99999974   358999999999999999999999997543211   12222211110                      


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-HHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-AADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-~~e~l~hp~f~~  214 (214)
                                          ....+...+..+.+||.+||+.||.+||+ ++++++||||++
T Consensus       236 --------------------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          236 --------------------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             --------------------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             --------------------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence                                01123445567889999999999999998 899999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=3.8e-30  Score=210.02  Aligned_cols=163  Identities=19%  Similarity=0.323  Sum_probs=124.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|++++.....+....+...+.  +..  .+|.++++|+|+||+||+++.++.+||+|||++.....  .....+||+.|
T Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y  181 (476)
T 2y94_A          102 ELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNY  181 (476)
T ss_dssp             EHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTT
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCe
Confidence            5777777766666666544222  222  36777789999999999999999999999999987643  34556899999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+..+ +.++||||+||+++++++|..||...+      .......+...  .                     
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~--~---------------------  232 (476)
T 2y94_A          182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH------VPTLFKKICDG--I---------------------  232 (476)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS------SHHHHHHHHTT--C---------------------
T ss_pred             EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhcC--C---------------------
Confidence            99999998875 689999999999999999999997533      23333332211  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                         ...+...+.++.+||.+||+.||++|||++|+++||||+
T Consensus       233 -------------------~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~  271 (476)
T 2y94_A          233 -------------------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK  271 (476)
T ss_dssp             -------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             -------------------cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence                               001223445778999999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=2.3e-30  Score=204.11  Aligned_cols=171  Identities=23%  Similarity=0.313  Sum_probs=121.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-------------CCCCCcCCcccchHHHhc-CCCCcchhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------------FTEDVQTRQYRSLEVLIN-AGYDCSADI   93 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di   93 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++.....             ....+||+.|+|||++.+ ..++.++||
T Consensus       127 ~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  206 (353)
T 2b9h_A          127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV  206 (353)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred             HHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhH
Confidence            366777899999999999999999999999999876421             123478999999999876 568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         94 WSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        94 ws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||+||+++++++|..||.+.+      ...++..+....|.++...............   .....+.........    
T Consensus       207 ~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----  273 (353)
T 2b9h_A          207 WSCGCILAELFLRRPIFPGRD------YRHQLLLIFGIIGTPHSDNDLRCIESPRARE---YIKSLPMYPAAPLEK----  273 (353)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCSTTTTTTCCCHHHHH---HHHTSCCCCCCCHHH----
T ss_pred             HHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCchhccccccccchhhH---HhhcccCCCCcchhh----
Confidence            999999999999999998655      5677778888888765322111111000000   000001111101000    


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                         ..+..+.++.+||.+||+.||++|||++|+|+||||++
T Consensus       274 ---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          274 ---MFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             ---HSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             ---hcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence               11345567889999999999999999999999999974

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=6.1e-30  Score=199.98  Aligned_cols=142  Identities=19%  Similarity=0.285  Sum_probs=109.8

Q ss_pred             ccccccccccccccccccCC---CcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..+++|+|++|.||++..   ++.+||+|||+++.....  .....||+.|+|||++.+..++.++||||+||+++++
T Consensus       147 LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  226 (327)
T 3lm5_A          147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYML  226 (327)
T ss_dssp             HHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHH
Confidence            66777899999999999987   789999999999877543  3445899999999999998999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      ..+....+.......+..                                      .....+.
T Consensus       227 l~g~~pf~~~~------~~~~~~~i~~~~~~~~~~--------------------------------------~~~~~~~  262 (327)
T 3lm5_A          227 LTHTSPFVGED------NQETYLNISQVNVDYSEE--------------------------------------TFSSVSQ  262 (327)
T ss_dssp             HHSSCSSCCSS------HHHHHHHHHHTCCCCCTT--------------------------------------TTTTSCH
T ss_pred             HhCCCCCCCCC------chHHHHHHHhcccccCch--------------------------------------hhcccCH
Confidence            99999997544      344444433321111110                                      1123455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.+|+.+||+.||.+|||++++|+||||++
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~  293 (327)
T 3lm5_A          263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQ  293 (327)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence            7789999999999999999999999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.96  E-value=2.2e-30  Score=202.34  Aligned_cols=174  Identities=16%  Similarity=0.209  Sum_probs=104.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc---ceEEeecCCceeccC---CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVDK---HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~~---~~~~~~~   72 (214)
                      +|.+++.....+...++...+.  +.  ..+|..+++|+|+||+||++..++   .+||+|||+++....   .....+|
T Consensus        92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  171 (325)
T 3kn6_A           92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF  171 (325)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCC
Confidence            5667777666666655544221  22  236777789999999999997655   899999999986643   2345678


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD-EDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      |+.|+|||++.+..|+.++||||+||+++++++|..||.+.+....... .+.+..+......++..             
T Consensus       172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------  238 (325)
T 3kn6_A          172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE-------------  238 (325)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSH-------------
T ss_pred             CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcc-------------
Confidence            9999999999999999999999999999999999999975442111111 11121111100000000             


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                               .....+.++.+|+.+||++||++|||++|+++||||++
T Consensus       239 -------------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          239 -------------------------AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             -------------------------HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             -------------------------cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence                                     00234567889999999999999999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=2.3e-30  Score=202.59  Aligned_cols=169  Identities=22%  Similarity=0.402  Sum_probs=121.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|..+++|+|++|.||+++.++.+||+|||+++....   ......|++.|+|||++.+. .++.++||||+||+++++
T Consensus       139 ~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  218 (331)
T 4aaa_A          139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM  218 (331)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHH
Confidence            36677789999999999999999999999999986643   23456899999999999886 689999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.+.+      ..+.+..+....|..++...........+...     ..+.........   .   ..+..+.
T Consensus       219 ~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~---~~~~~~~  281 (331)
T 4aaa_A          219 FMGEPLFPGDS------DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV-----RLPEIKEREPLE---R---RYPKLSE  281 (331)
T ss_dssp             HHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTC-----CCCCCSSCCCHH---H---HSTTSCH
T ss_pred             HhCCCCCCCCC------cHHHHHHHHHHhCCCChhhhhHhhhccccccc-----cCccccccchhh---h---cccchhH
Confidence            99999998655      67788888888887766543322111111000     001111111000   0   0124466


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+.+||.+||++||++|||++|+|+||||+
T Consensus       282 ~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          282 VVIDLAKKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             HHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhcCchhc
Confidence            789999999999999999999999999996

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=1.2e-29  Score=201.10  Aligned_cols=168  Identities=18%  Similarity=0.326  Sum_probs=120.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|++|.||+++.++.+||+|||++.....  .....+||+.|
T Consensus       186 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y  265 (365)
T 2y7j_A          186 ELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGY  265 (365)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCc
Confidence            4555555544554444433211  12  235667789999999999999999999999999987653  34456899999


Q ss_pred             cchHHHhcC------CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         77 RSLEVLINA------GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        77 ~aPE~~~~~------~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      +|||++.+.      .++.++||||+||+++++++|..||...+      ....+..+......++...           
T Consensus       266 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~-----------  328 (365)
T 2y7j_A          266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------QILMLRMIMEGQYQFSSPE-----------  328 (365)
T ss_dssp             CCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCHHH-----------
T ss_pred             cChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCCcc-----------
Confidence            999999753      57889999999999999999999997533      3333333322111111000           


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                                 ....+..+.+|+.+||+.||++|||++|+|+||||+.
T Consensus       329 ---------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          329 ---------------------------WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             ---------------------------HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ---------------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence                                       0123456789999999999999999999999999974

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.96  E-value=2e-30  Score=203.92  Aligned_cols=170  Identities=22%  Similarity=0.324  Sum_probs=121.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCC-C---cceEEeecCCceeccC---CCCCCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLP-P---FLFDIGTYRNACWVDK---HFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~-~---~~~kl~Dfg~a~~~~~---~~~~~~   71 (214)
                      +|++++.....+....+.....  +.  ..+|.++++|+|+||+||++.. +   +.+||+|||++.....   .....+
T Consensus       102 ~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  181 (342)
T 2qr7_A          102 ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC  181 (342)
T ss_dssp             BHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSS
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccC
Confidence            5666676666665555533221  12  2367778899999999999643 2   4699999999987643   234568


Q ss_pred             cCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         72 QTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        72 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      ||+.|+|||++.+.+|+.++||||+||+++++++|..||.+....   ...+.+..+..  +..+.              
T Consensus       182 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~--~~~~~--------------  242 (342)
T 2qr7_A          182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGS--GKFSL--------------  242 (342)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHH--CCCCC--------------
T ss_pred             CCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHcc--CCccc--------------
Confidence            999999999999888999999999999999999999999753211   12233332221  11100              


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                              +              .......+..+.+|+.+||+.||++|||+.++++||||.
T Consensus       243 --------~--------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          243 --------S--------------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             --------C--------------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             --------C--------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence                    0              001133456788999999999999999999999999984

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=2.1e-30  Score=207.73  Aligned_cols=171  Identities=20%  Similarity=0.271  Sum_probs=114.9

Q ss_pred             cchhhhhccC--chhhhhHHHHHH--hh--hcccccccccccccccccccCC---CcceEEeecCCceeccC--CCCCCC
Q psy16751          3 SIFNFFVAFG--SLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDK--HFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~--~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~--~~~~~~   71 (214)
                      +|++++....  .+....+...+.  +.  ..+|.++++|+|+|+.||+++.   ++.+||+|||+++....  .....+
T Consensus       145 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  224 (400)
T 1nxk_A          145 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC  224 (400)
T ss_dssp             EHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------
T ss_pred             cHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCC
Confidence            4566665543  244444433211  11  2366777899999999999987   78999999999987653  234568


Q ss_pred             cCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         72 QTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        72 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      ||+.|+|||++.+..|+.++||||+||++++|++|..||.+..........  ...+..  +...               
T Consensus       225 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~--~~~i~~--~~~~---------------  285 (400)
T 1nxk_A          225 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM--KTRIRM--GQYE---------------  285 (400)
T ss_dssp             --CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH--HHHHHH--TCCC---------------
T ss_pred             CCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH--HHHHHc--Cccc---------------
Confidence            999999999998889999999999999999999999999764432211111  111111  1100               


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                             .+.              ......+.++.+||.+||+.||++|||++|+|+||||.
T Consensus       286 -------~~~--------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          286 -------FPN--------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             -------CCT--------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             -------CCC--------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence                   000              00123456788999999999999999999999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=5.5e-30  Score=200.91  Aligned_cols=158  Identities=15%  Similarity=0.273  Sum_probs=118.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y   76 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+||.||+++.++.+||+|||++......  ....+||+.|
T Consensus       116 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y  195 (335)
T 3dls_A          116 DLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEY  195 (335)
T ss_dssp             BHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccc
Confidence            4556666555555555433211  12  2367777899999999999999999999999999877543  3345799999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+..+ +.++||||+||+++++++|..||.....               .        ...             
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------------~--------~~~-------------  239 (335)
T 3dls_A          196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------------T--------VEA-------------  239 (335)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------G--------TTT-------------
T ss_pred             cChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------------H--------Hhh-------------
Confidence            99999998876 7899999999999999999999963110               0        000             


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                        ....+...+.++.+||.+||+.||++|||++++++||||++
T Consensus       240 ------------------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          240 ------------------AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             ------------------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             ------------------ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence                              00011224457789999999999999999999999999964

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=204.04  Aligned_cols=166  Identities=16%  Similarity=0.262  Sum_probs=120.3

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~   73 (214)
                      +|++++.+.. .+....++..+.  +.  ..+|..+++|+|+||+||+++.++.+||+|||+|+.....    ....+||
T Consensus       147 ~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt  226 (412)
T 2vd5_A          147 DLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGT  226 (412)
T ss_dssp             BHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSC
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccc
Confidence            5666666543 444444432111  11  2366777899999999999999999999999999876432    2345899


Q ss_pred             CcccchHHHhc-------CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHh--CCCChHHhhccC
Q psy16751         74 RQYRSLEVLIN-------AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL--GDIPKRIIQSGH  144 (214)
Q Consensus        74 ~~y~aPE~~~~-------~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~  144 (214)
                      +.|+|||++.+       ..|+.++|+||+||+++||++|..||.+.+      ..+...++...-  ...|.       
T Consensus       227 ~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~~p~-------  293 (412)
T 2vd5_A          227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS------TAETYGKIVHYKEHLSLPL-------  293 (412)
T ss_dssp             GGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCCCC--------
T ss_pred             cCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhcccCcCCCc-------
Confidence            99999999983       458999999999999999999999998644      344444443210  00000       


Q ss_pred             CccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCC---CCHHHHhcCCCCCC
Q psy16751        145 RSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLR---ATAADCLQHPWLQN  214 (214)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R---~t~~e~l~hp~f~~  214 (214)
                                                      .+...+.++.+||.+||+ +|.+|   +|++|+++||||++
T Consensus       294 --------------------------------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          294 --------------------------------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             -----------------------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             --------------------------------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence                                            012345678899999999 99998   58999999999974

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=4.6e-30  Score=201.92  Aligned_cols=165  Identities=15%  Similarity=0.298  Sum_probs=115.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~   73 (214)
                      +|.+++.....+...+++..+.  +..  .+|.++++|+|+||+||++. ++.+||+|||+++.....     ....+||
T Consensus        94 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt  172 (343)
T 3dbq_A           94 DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGT  172 (343)
T ss_dssp             EHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCC
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCC
Confidence            4666776666665555533221  222  36777789999999999996 688999999999876432     2345899


Q ss_pred             CcccchHHHhc-----------CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhc
Q psy16751         74 RQYRSLEVLIN-----------AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQS  142 (214)
Q Consensus        74 ~~y~aPE~~~~-----------~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  142 (214)
                      +.|+|||++.+           ..++.++||||+||+++++++|..||....        .....+.........     
T Consensus       173 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~~~~~~~~~-----  239 (343)
T 3dbq_A          173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--------NQISKLHAIIDPNHE-----  239 (343)
T ss_dssp             CSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--------SHHHHHHHHHCTTSC-----
T ss_pred             cCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh--------hHHHHHHHHhcCCcc-----
Confidence            99999999986           568899999999999999999999996432        112222222111000     


Q ss_pred             cCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        143 GHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                                      ...+...+..+.+|+.+||+.||.+|||+.|+|+||||+
T Consensus       240 --------------------------------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          240 --------------------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             --------------------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             --------------------------------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence                                            011223345678999999999999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=6e-30  Score=205.38  Aligned_cols=143  Identities=18%  Similarity=0.252  Sum_probs=113.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCC----CCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAG----YDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~----~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+|+.....    ....+||+.|+|||++.+.+    |+.++|+||+||+
T Consensus       183 ~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi  262 (410)
T 3v8s_A          183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  262 (410)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred             HHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence            367777899999999999999999999999999876543    34668999999999999765    7889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +++|++|..||.+.+      ......++......+                                      .+....
T Consensus       263 lyell~G~~Pf~~~~------~~~~~~~i~~~~~~~--------------------------------------~~p~~~  298 (410)
T 3v8s_A          263 LYEMLVGDTPFYADS------LVGTYSKIMNHKNSL--------------------------------------TFPDDN  298 (410)
T ss_dssp             HHHHHHSSCTTCCSS------HHHHHHHHHTHHHHC--------------------------------------CCCTTC
T ss_pred             HHHHHhCCCCCCCCC------hhhHHHHHHhccccc--------------------------------------cCCCcc
Confidence            999999999998644      445555544321000                                      000112


Q ss_pred             hhHHHHHHHHHHccccCCCC--CCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKL--RATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~--R~t~~e~l~hp~f~~  214 (214)
                      ..+.++.+||.+||+.+|.+  |+|++|+++||||++
T Consensus       299 ~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          299 DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred             cccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence            34567889999999999988  999999999999974

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=9.7e-30  Score=194.79  Aligned_cols=168  Identities=21%  Similarity=0.266  Sum_probs=121.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcc---eEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFL---FDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~---~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|.+++.....+...++...+.  +.  ..+|..+++|+|++|.||++..++.   +||+|||.+......  .....||
T Consensus        91 ~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  170 (284)
T 3kk8_A           91 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT  170 (284)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSC
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCC
Confidence            4455555555555554433211  12  2366677899999999999976554   999999999877543  3345899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+..++.++||||+|++++++++|..||...+      .......+.......+..               
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~---------------  229 (284)
T 3kk8_A          171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGAYDYPSP---------------  229 (284)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTT---------------
T ss_pred             cCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc------hhHHHHHHHhccccCCch---------------
Confidence            99999999999899999999999999999999999997543      233333332211111100               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             .....+..+.+|+.+||++||++|||++|+|+||||++
T Consensus       230 -----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (284)
T 3kk8_A          230 -----------------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  267 (284)
T ss_dssp             -----------------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred             -----------------------hhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence                                   01234457789999999999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=5.5e-30  Score=202.82  Aligned_cols=169  Identities=17%  Similarity=0.273  Sum_probs=109.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcc--eEEeecCCceecc--CCCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFL--FDIGTYRNACWVD--KHFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~--~kl~Dfg~a~~~~--~~~~~~~~~~   74 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+||.||+++.++.  +||+|||+|+...  ......+||+
T Consensus       102 ~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~  181 (361)
T 3uc3_A          102 ELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP  181 (361)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------C
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCC
Confidence            4566666666665555544222  22  2367777899999999999987665  9999999997543  3344568999


Q ss_pred             cccchHHHhcCCCCcc-hhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         75 QYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~-~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      .|+|||++.+..++.. +||||+||+++++++|..||.+.....  .....+..+.......+                 
T Consensus       182 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~-----------------  242 (361)
T 3uc3_A          182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSIP-----------------  242 (361)
T ss_dssp             TTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCCC-----------------
T ss_pred             CcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCCC-----------------
Confidence            9999999999887755 899999999999999999997543111  01111111111000000                 


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                             .....+..+.+||.+||+.||++|||+.|+++||||.
T Consensus       243 -----------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          243 -----------------------DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             -----------------------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             -----------------------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchh
Confidence                                   0112345778999999999999999999999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=6.7e-30  Score=209.67  Aligned_cols=166  Identities=21%  Similarity=0.327  Sum_probs=121.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccC---CCcceEEeecCCceeccC--CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSL---PPFLFDIGTYRNACWVDK--HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~---~~~~~kl~Dfg~a~~~~~--~~~~~~~~   73 (214)
                      +|++++.....+....+...+.  +.  ..+|.++++|+|+||.||++.   .++.+||+|||+|+....  .....+||
T Consensus       107 ~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  186 (486)
T 3mwu_A          107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT  186 (486)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTG
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCC
Confidence            4666676666666665544222  22  236777789999999999995   456899999999986643  34456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+ .|+.++||||+||+++++++|.+||.+.+      ..+.+..+......++..               
T Consensus       187 ~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~---------------  244 (486)
T 3mwu_A          187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKYAFDLP---------------  244 (486)
T ss_dssp             GGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCSCSG---------------
T ss_pred             CCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCCc---------------
Confidence            99999999876 59999999999999999999999997544      344444443211111000               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                             .....+.++.+||.+||++||++|||+.|+|+||||+
T Consensus       245 -----------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~  281 (486)
T 3mwu_A          245 -----------------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ  281 (486)
T ss_dssp             -----------------------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHH
T ss_pred             -----------------------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhc
Confidence                                   0123456778999999999999999999999999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=3.5e-30  Score=211.19  Aligned_cols=166  Identities=20%  Similarity=0.312  Sum_probs=124.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hccccccccccccccccccc---CCCcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRS---LPPFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~---~~~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.....+...++...+.  +.  ..+|.++++|+|+||.||++   ..++.+||+|||+|+.....  ....+||
T Consensus       112 ~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  191 (484)
T 3nyv_A          112 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT  191 (484)
T ss_dssp             BHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTG
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCC
Confidence            5667777777776666644222  22  23677788999999999999   46789999999999866432  2345899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+ .|+.++||||+||+++++++|.+||.+.+      ..+.+..+......++..               
T Consensus       192 ~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~---------------  249 (484)
T 3nyv_A          192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN------EYDILKKVEKGKYTFELP---------------  249 (484)
T ss_dssp             GGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCSG---------------
T ss_pred             ccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCCCCc---------------
Confidence            99999999976 69999999999999999999999997644      344444443311111000               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                             .....+..+.+||.+||++||++|||+.|+|+||||+
T Consensus       250 -----------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~  286 (484)
T 3nyv_A          250 -----------------------QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ  286 (484)
T ss_dssp             -----------------------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             -----------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhc
Confidence                                   0123456778999999999999999999999999985

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=8.3e-30  Score=203.72  Aligned_cols=165  Identities=16%  Similarity=0.289  Sum_probs=114.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~   73 (214)
                      +|.+++.....+...++...+.  +.  ..+|.++++|+|+||.||++. ++.+||+|||+++.....     ....+||
T Consensus       141 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt  219 (390)
T 2zmd_A          141 DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGA  219 (390)
T ss_dssp             EHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCC
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcC
Confidence            4566666655554444432111  22  236777789999999999995 689999999999876432     2355899


Q ss_pred             CcccchHHHhc-----------CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhc
Q psy16751         74 RQYRSLEVLIN-----------AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQS  142 (214)
Q Consensus        74 ~~y~aPE~~~~-----------~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  142 (214)
                      +.|+|||++.+           ..++.++||||+||++++|++|..||.....     ....+..+.   .....     
T Consensus       220 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~---~~~~~-----  286 (390)
T 2zmd_A          220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAII---DPNHE-----  286 (390)
T ss_dssp             GGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHH---CTTSC-----
T ss_pred             CCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHh---Ccccc-----
Confidence            99999999986           3588999999999999999999999974321     222222221   11000     


Q ss_pred             cCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        143 GHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                                      ...+...+..+.+||.+||+.||++|||+.|+|+||||+
T Consensus       287 --------------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          287 --------------------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             --------------------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             --------------------------------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence                                            001122245678999999999999999999999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=7.8e-30  Score=201.23  Aligned_cols=142  Identities=23%  Similarity=0.328  Sum_probs=109.0

Q ss_pred             cccccccccccccccccccCCCc---ceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|.++++|+|+||+||++..++   .+||+|||++......   ....+||+.|+|||++.+..++.++||||+||+++
T Consensus       145 ~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  224 (351)
T 3c0i_A          145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF  224 (351)
T ss_dssp             HHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred             HHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHH
Confidence            36777789999999999997654   4999999999877543   34568999999999999989999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||.+.       .......+.......+...                                      ....
T Consensus       225 ~ll~g~~pf~~~-------~~~~~~~i~~~~~~~~~~~--------------------------------------~~~~  259 (351)
T 3c0i_A          225 ILLSGCLPFYGT-------KERLFEGIIKGKYKMNPRQ--------------------------------------WSHI  259 (351)
T ss_dssp             HHHHSSCSSCSS-------HHHHHHHHHHTCCCCCHHH--------------------------------------HTTS
T ss_pred             HHHHCCCCCCCc-------HHHHHHHHHcCCCCCCccc--------------------------------------cccC
Confidence            999999999742       1222222222100111000                                      0223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +..+.+||.+||+.||++|||+.|+|+||||++
T Consensus       260 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            457789999999999999999999999999863

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.96  E-value=1.2e-29  Score=193.64  Aligned_cols=166  Identities=22%  Similarity=0.304  Sum_probs=121.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hccccccccccccccccccc---CCCcceEEeecCCceeccC--CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRS---LPPFLFDIGTYRNACWVDK--HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~---~~~~~~kl~Dfg~a~~~~~--~~~~~~~~   73 (214)
                      +|.+++.....+...++.....  +.  ..+|.++++|+|++|.||++   +.++.++|+|||++.....  ......||
T Consensus        92 ~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t  171 (277)
T 3f3z_A           92 ELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGT  171 (277)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSC
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCC
Confidence            4556665555554444433211  12  23677778999999999999   7789999999999987643  33456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+. ++.++||||+|++++++++|..||...+      ..+....+.+....++....             
T Consensus       172 ~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~-------------  231 (277)
T 3f3z_A          172 PYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT------DSEVMLKIREGTFTFPEKDW-------------  231 (277)
T ss_dssp             TTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCHHHH-------------
T ss_pred             CCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCchhh-------------
Confidence            999999998764 8999999999999999999999997543      33444433332111111100             


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                               ...+..+.+|+.+||+.||++|||+.++|+||||+
T Consensus       232 -------------------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~  266 (277)
T 3f3z_A          232 -------------------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE  266 (277)
T ss_dssp             -------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             -------------------------hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence                                     12345778999999999999999999999999985

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=1.6e-29  Score=197.19  Aligned_cols=140  Identities=21%  Similarity=0.315  Sum_probs=110.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.++++|+|++|+||+++.++.+||+|||++......   ....+||+.|+|||++.+..++.++||||+||+++++++
T Consensus       157 LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~  236 (321)
T 2c30_A          157 LHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD  236 (321)
T ss_dssp             HHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence            66677899999999999999999999999999876532   345589999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      ..+.+..+...  ..+. .                                    ......+..+
T Consensus       237 g~~pf~~~~------~~~~~~~~~~~--~~~~-~------------------------------------~~~~~~~~~l  271 (321)
T 2c30_A          237 GEPPYFSDS------PVQAMKRLRDS--PPPK-L------------------------------------KNSHKVSPVL  271 (321)
T ss_dssp             SSCTTTTSC------HHHHHHHHHHS--SCCC-C------------------------------------TTGGGSCHHH
T ss_pred             CCCCCCCCC------HHHHHHHHhcC--CCCC-c------------------------------------CccccCCHHH
Confidence            999997543      23333322211  0000 0                                    0112344567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+|+.+||+.||++|||++|+++||||.
T Consensus       272 ~~li~~~l~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          272 RDFLERMLVRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred             HHHHHHHccCChhhCcCHHHHhcChhhc
Confidence            8999999999999999999999999996

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=8.7e-30  Score=205.35  Aligned_cols=169  Identities=22%  Similarity=0.343  Sum_probs=114.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCC---cceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPP---FLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~---~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.....+....++..+.  +..  .+|.++++|+|+||+||++..+   +.+||+|||+|+.....  ....+||
T Consensus       225 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt  304 (419)
T 3i6u_A          225 ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT  304 (419)
T ss_dssp             BGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCC
Confidence            5777777777776666644322  222  3667778999999999999654   45999999999876543  3456899


Q ss_pred             CcccchHHHhc---CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         74 RQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        74 ~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      +.|+|||++.+   ..|+.++||||+||+++++++|..||.......     .....+...........           
T Consensus       305 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-----~~~~~i~~~~~~~~~~~-----------  368 (419)
T 3i6u_A          305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-----SLKDQITSGKYNFIPEV-----------  368 (419)
T ss_dssp             CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-----CHHHHHHTTCCCCCHHH-----------
T ss_pred             CCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-----HHHHHHhcCCCCCCchh-----------
Confidence            99999999864   468889999999999999999999997533110     11111111000000000           


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                                 ....+..+.+|+.+||++||++|||++|+|+||||++
T Consensus       369 ---------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          369 ---------------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             ---------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ---------------------------hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence                                       0234557789999999999999999999999999974

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.96  E-value=1.5e-29  Score=209.68  Aligned_cols=142  Identities=18%  Similarity=0.295  Sum_probs=112.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+|+....  .....+||+.|+|||++.+.+|+.++|+||+||++++|++|
T Consensus       302 LH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG  381 (576)
T 2acx_A          302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG  381 (576)
T ss_dssp             HHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHS
T ss_pred             HHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhC
Confidence            6777789999999999999999999999999987643  23456899999999999998899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||.+....   .....+....... .                                        ...+...+.++.
T Consensus       382 ~~PF~~~~~~---~~~~~i~~~i~~~-~----------------------------------------~~~p~~~s~~~~  417 (576)
T 2acx_A          382 QSPFQQRKKK---IKREEVERLVKEV-P----------------------------------------EEYSERFSPQAR  417 (576)
T ss_dssp             SCSSSCSSSC---CCHHHHHHHHHHC-C----------------------------------------CCCCTTSCHHHH
T ss_pred             CCCCcccccc---hhHHHHHHHhhcc-c----------------------------------------ccCCccCCHHHH
Confidence            9999754321   1222222222110 0                                        012234456788


Q ss_pred             HHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        187 EFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                      +||.+||+.||.+|+     |++|+++||||++
T Consensus       418 dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            999999999999999     7999999999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=1.5e-29  Score=208.03  Aligned_cols=166  Identities=20%  Similarity=0.326  Sum_probs=122.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCC---CcceEEeecCCceeccC--CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDK--HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~--~~~~~~~~   73 (214)
                      +|++++.+...+...++...+.  +.  ..+|..+++|+|+||.||++..   ++.+||+|||+|+....  .....+||
T Consensus       122 ~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt  201 (494)
T 3lij_A          122 ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT  201 (494)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSC
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCC
Confidence            4666676666665555543221  22  2367777899999999999976   45699999999987753  34456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++. ..|+.++||||+||+++++++|.+||.+.+      ..+.+..+......++...              
T Consensus       202 ~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~--------------  260 (494)
T 3lij_A          202 AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT------DQEILRKVEKGKYTFDSPE--------------  260 (494)
T ss_dssp             TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCSGG--------------
T ss_pred             cCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCchh--------------
Confidence            9999999986 469999999999999999999999997544      3444444433211111100              


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                              ....+..+.+||.+||++||.+|||+.|+|+||||+
T Consensus       261 ------------------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          261 ------------------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             ------------------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             ------------------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence                                    023445778999999999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=3.6e-29  Score=195.42  Aligned_cols=137  Identities=18%  Similarity=0.202  Sum_probs=105.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---------------CCCCCcCCcccchHHHhcCCCCcchh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---------------FTEDVQTRQYRSLEVLINAGYDCSAD   92 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~D   92 (214)
                      .+|.++++|+|+||.||+++.++.+||+|||+++.....               ....+||+.|+|||++.+..++.++|
T Consensus       179 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  258 (332)
T 3qd2_B          179 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVD  258 (332)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHH
T ss_pred             HHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhh
Confidence            366677899999999999999999999999999877532               23347999999999999999999999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHh-CCCChHHhhccCCccccccccCccccCCCCCCCchhhHH
Q psy16751         93 IWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL-GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL  171 (214)
Q Consensus        93 iws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (214)
                      |||+||+++++++|..++.           .....+.... +..+..                                 
T Consensus       259 i~slG~il~el~~~~~~~~-----------~~~~~~~~~~~~~~~~~---------------------------------  294 (332)
T 3qd2_B          259 IFSLGLILFELLYSFSTQM-----------ERVRIITDVRNLKFPLL---------------------------------  294 (332)
T ss_dssp             HHHHHHHHHHHHSCCCCHH-----------HHHHHHHHHHTTCCCHH---------------------------------
T ss_pred             HHHHHHHHHHHHHcCCChh-----------HHHHHHHHhhccCCCcc---------------------------------
Confidence            9999999999999866542           1111111111 111110                                 


Q ss_pred             HhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       172 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                            ....++.+.+|+.+||+.||++|||++|+|+||||++
T Consensus       295 ------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          295 ------FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             ------HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ------cccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence                  0223356689999999999999999999999999985

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=1e-29  Score=196.15  Aligned_cols=141  Identities=15%  Similarity=0.230  Sum_probs=108.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC---CCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG---YDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~---~~~~~Diws~G~~l~  101 (214)
                      .+|.++++|+|+||.||+++.++.+||+|||+++.....   .....||+.|+|||++.+..   ++.++||||+||+++
T Consensus       152 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~  231 (298)
T 2zv2_A          152 YLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY  231 (298)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred             HHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence            366777899999999999999999999999999876532   34558999999999998765   367899999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||....      .......+..  +..+                                      .......
T Consensus       232 ~l~~g~~pf~~~~------~~~~~~~~~~--~~~~--------------------------------------~~~~~~~  265 (298)
T 2zv2_A          232 CFVFGQCPFMDER------IMCLHSKIKS--QALE--------------------------------------FPDQPDI  265 (298)
T ss_dssp             HHHHSSCSSCCSS------HHHHHHHHHH--CCCC--------------------------------------CCSSSCC
T ss_pred             HHHHCCCCCCCcc------HHHHHHHHhc--ccCC--------------------------------------CCCcccc
Confidence            9999999997432      1222221111  0000                                      0001234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +..+.+||.+||+.||++|||+.|+++||||+.
T Consensus       266 ~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          266 AEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             CHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence            456789999999999999999999999999863

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=1.5e-29  Score=193.38  Aligned_cols=138  Identities=17%  Similarity=0.318  Sum_probs=107.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      .+|..+++|+|++|.||+++.++.++|+|||++..... ......|++.|+|||.+.+..++.++||||+|++++++++|
T Consensus       124 ~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  203 (279)
T 3fdn_A          124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG  203 (279)
T ss_dssp             HHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             HHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHC
Confidence            36677789999999999999999999999999866543 23455899999999999998899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+      ..+....+.....                                          ..+...+..+.
T Consensus       204 ~~p~~~~~------~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~  235 (279)
T 3fdn_A          204 KPPFEANT------YQETYKRISRVEF------------------------------------------TFPDFVTEGAR  235 (279)
T ss_dssp             SCTTCCSS------HHHHHHHHHHTCC------------------------------------------CCCTTSCHHHH
T ss_pred             CCCCCCCc------HHHHHHHHHhCCC------------------------------------------CCCCcCCHHHH
Confidence            99997533      2333333322100                                          11233455678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +|+.+||+.||++|||++|+++||||+
T Consensus       236 ~li~~~l~~~p~~Rps~~e~l~h~~~~  262 (279)
T 3fdn_A          236 DLISRLLKHNPSQRPMLREVLEHPWIT  262 (279)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHhhCcccc
Confidence            999999999999999999999999985

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=6e-30  Score=202.38  Aligned_cols=202  Identities=19%  Similarity=0.223  Sum_probs=118.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhhc--ccc-cccccccccccccccCCCcceEEeecCCceecc-CCCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRNA--CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD-KHFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~~--~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~~~y   76 (214)
                      +|.+++.....+....+.....  +..+  +|. +.++|+|++|.||+++.++.+||+|||++.... .......||+.|
T Consensus       117 ~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y  196 (360)
T 3eqc_A          117 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY  196 (360)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTT
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCe
Confidence            4555665555544444433211  2222  444 367999999999999999999999999997653 234456899999


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHH--HhCCCChHHhhccCCccccccccC
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE--LLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      +|||++.+..++.++||||+||+++++++|..||...+       ...+..+..  ..+..... ..........+... 
T Consensus       197 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-  267 (360)
T 3eqc_A          197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD-------AKELELMFGCQVEGDAAET-PPRPRTPGRPLNKF-  267 (360)
T ss_dssp             CCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC-------HHHHHHHHC--------------------------
T ss_pred             ECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHhcccccccCCCC-CCCcccCCCccccc-
Confidence            99999999899999999999999999999999997543       222222211  11111100 00000000000000 


Q ss_pred             ccccCCCCCCCchhhHHHhhc---CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKY---NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .....+...............   ......+.++.+||.+||++||++|||++|+|+||||+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence            000000000000001110000   01123466789999999999999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=5.5e-29  Score=193.41  Aligned_cols=174  Identities=20%  Similarity=0.270  Sum_probs=113.9

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcc---eEEeecCCceeccC----------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFL---FDIGTYRNACWVDK----------   65 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~---~kl~Dfg~a~~~~~----------   65 (214)
                      +|.+++.....+...+++..+.  +.  ..+|.++++|+|+||.||++..++.   +||+|||++.....          
T Consensus        97 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  176 (316)
T 2ac3_A           97 SILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP  176 (316)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------------
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccc
Confidence            4556665555555555433221  22  2367777899999999999987765   99999999876531          


Q ss_pred             CCCCCCcCCcccchHHHhc-----CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCc--------HH-HHHHHHHH
Q psy16751         66 HFTEDVQTRQYRSLEVLIN-----AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD--------ED-HLAHIIEL  131 (214)
Q Consensus        66 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~--------~~-~~~~~~~~  131 (214)
                      .....+||+.|+|||++.+     ..++.++||||+||+++++++|..||.+.......-.        .. ....+...
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  256 (316)
T 2ac3_A          177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG  256 (316)
T ss_dssp             -----CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHC
T ss_pred             ccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhcc
Confidence            1223469999999999986     4588999999999999999999999976442110000        00 01111100


Q ss_pred             hCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        132 LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       132 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      ....+...                                      ....+..+.+|+.+||+.||++|||++|+|+|||
T Consensus       257 ~~~~~~~~--------------------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  298 (316)
T 2ac3_A          257 KYEFPDKD--------------------------------------WAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW  298 (316)
T ss_dssp             CCCCCHHH--------------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred             CcccCchh--------------------------------------cccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence            00000000                                      0123457789999999999999999999999999


Q ss_pred             CCC
Q psy16751        212 LQN  214 (214)
Q Consensus       212 f~~  214 (214)
                      |++
T Consensus       299 ~~~  301 (316)
T 2ac3_A          299 VQG  301 (316)
T ss_dssp             CC-
T ss_pred             hcC
Confidence            974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=3.4e-29  Score=192.40  Aligned_cols=166  Identities=14%  Similarity=0.218  Sum_probs=116.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccc--cccccccccccccC-CCcceEEeecCCceeccCC-CCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDK--HFTEDVQTRQYRSL-PPFLFDIGTYRNACWVDKH-FTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~--~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~~~-~~~~~~~~   74 (214)
                      +|.+++.....+....+...+.  +..  .+|...  ++|+|++|.||++. .++.+||+|||++...... .....||+
T Consensus       115 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~  194 (290)
T 1t4h_A          115 TLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP  194 (290)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred             CHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCc
Confidence            4555555444444444332111  222  356666  89999999999997 7899999999999765433 34457999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||++.+ .++.++||||+||+++++++|..||....      ....+...... +..+..                
T Consensus       195 ~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~-~~~~~~----------------  250 (290)
T 1t4h_A          195 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVTS-GVKPAS----------------  250 (290)
T ss_dssp             CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHTT-TCCCGG----------------
T ss_pred             CcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC------cHHHHHHHHhc-cCCccc----------------
Confidence            9999998764 58999999999999999999999997533      22322221110 000000                


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                            .+...++.+.+|+.+||+.||++|||++|+|+||||++
T Consensus       251 ----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          251 ----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ----------------------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                                  11223356789999999999999999999999999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=3.5e-29  Score=206.22  Aligned_cols=166  Identities=18%  Similarity=0.255  Sum_probs=123.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc---ceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.....+...++...+.  +.  ..+|..+++|+|+||+||++..++   .+||+|||+|......  ....+||
T Consensus       132 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  211 (504)
T 3q5i_A          132 ELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT  211 (504)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSC
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCC
Confidence            5667776666666665544222  22  236777789999999999998765   6999999999877543  4456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++. ..|+.++||||+||+++++++|.+||.+.+      ..+.+..+......++...              
T Consensus       212 ~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~--------------  270 (504)
T 3q5i_A          212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN------DQDIIKKVEKGKYYFDFND--------------  270 (504)
T ss_dssp             TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCHHH--------------
T ss_pred             cCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCCCCccc--------------
Confidence            9999999986 468999999999999999999999997644      3444444433111111100              


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                              ....+.++.+|+.+||++||.+|||++|+|+||||+
T Consensus       271 ------------------------~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  306 (504)
T 3q5i_A          271 ------------------------WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK  306 (504)
T ss_dssp             ------------------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             ------------------------cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhh
Confidence                                    023445778999999999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.9e-29  Score=198.21  Aligned_cols=143  Identities=17%  Similarity=0.187  Sum_probs=108.1

Q ss_pred             cccccccccccccccccccCCCc--ceEEeecCCceeccC-------CCCCCCcCCcccchHHHhc--CCCCcchhhHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF--LFDIGTYRNACWVDK-------HFTEDVQTRQYRSLEVLIN--AGYDCSADIWSV   96 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~--~~kl~Dfg~a~~~~~-------~~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~   96 (214)
                      .+|..+++|+|++|.||++..++  .+||+|||++.....       ......||+.|+|||++.+  ..++.++||||+
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            36667789999999999998766  899999999987632       1234579999999999986  468999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcC
Q psy16751         97 ACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN  176 (214)
Q Consensus        97 G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (214)
                      ||+++++++|..||.+.+      ..+.+..+.......+..                                      
T Consensus       263 G~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~--------------------------------------  298 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVN------DADTISQVLNKKLCFENP--------------------------------------  298 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCTTSG--------------------------------------
T ss_pred             HHHHHHHHHCCCCCCCCC------hHHHHHHHHhcccccCCc--------------------------------------
Confidence            999999999999997544      344444433211110000                                      


Q ss_pred             CChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       177 ~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .....+..+.+||.+||+.||.+|||+.++|+||||++
T Consensus       299 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          299 NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence            01224567789999999999999999999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.96  E-value=1e-28  Score=204.01  Aligned_cols=143  Identities=14%  Similarity=0.187  Sum_probs=111.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|.++++|+|+||+||+++.+|.+||+|||+++.....   ....+||+.|+|||++.+.+|+.++|+||+||++++|+
T Consensus       304 ~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyell  383 (543)
T 3c4z_A          304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI  383 (543)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHH
Confidence            366777899999999999999999999999999876432   23458999999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|.+||.+.+...  ........+...  .                                        ...+...+..
T Consensus       384 tG~~PF~~~~~~~--~~~~~~~~i~~~--~----------------------------------------~~~p~~~s~~  419 (543)
T 3c4z_A          384 AARGPFRARGEKV--ENKELKQRVLEQ--A----------------------------------------VTYPDKFSPA  419 (543)
T ss_dssp             HSSCSSCCTTCCC--CHHHHHHHHHHC--C----------------------------------------CCCCTTSCHH
T ss_pred             hCCCCCCCCccch--hHHHHHHHHhhc--c----------------------------------------cCCCcccCHH
Confidence            9999997543111  112222222110  0                                        1123445567


Q ss_pred             HHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                      +.+||.+||+.||++||+     ++++++||||++
T Consensus       420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          420 SKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            789999999999999996     589999999974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.1e-28  Score=194.84  Aligned_cols=168  Identities=15%  Similarity=0.175  Sum_probs=120.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~   74 (214)
                      +|.+++.....+....++..+.  +..  .+|...++|+|+||.||+++.++.+||+|||+++....    .....+||+
T Consensus       145 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~  224 (355)
T 1vzo_A          145 ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI  224 (355)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCC
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCc
Confidence            5666666666665555543221  222  36667789999999999999999999999999986632    233457999


Q ss_pred             cccchHHHhcC--CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         75 QYRSLEVLINA--GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        75 ~y~aPE~~~~~--~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      .|+|||++.+.  .++.++||||+||+++++++|..||.......   ....+...... ..                  
T Consensus       225 ~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~-~~------------------  282 (355)
T 1vzo_A          225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAEISRRILK-SE------------------  282 (355)
T ss_dssp             TTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC---CHHHHHHHHHH-CC------------------
T ss_pred             CccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc---hHHHHHHHHhc-cC------------------
Confidence            99999999864  47889999999999999999999997543211   22222111110 00                  


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                            ...+...+..+.+||.+||+.||.+||     |++|+++||||++
T Consensus       283 ----------------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          283 ----------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             ----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             ----------------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence                                  012234455778999999999999999     9999999999974

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.95  E-value=5.2e-29  Score=190.86  Aligned_cols=163  Identities=16%  Similarity=0.320  Sum_probs=120.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC-CCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-FTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~   77 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+++.||+++.++.+||+|||.+...... .....|++.|+
T Consensus       100 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~  179 (284)
T 2vgo_A          100 ELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYL  179 (284)
T ss_dssp             EHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGC
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcC
Confidence            4455555554444444332111  12  2366777899999999999999999999999999766542 34457899999


Q ss_pred             chHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccc
Q psy16751         78 SLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELR  157 (214)
Q Consensus        78 aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  157 (214)
                      |||++.+..++.++||||+|++++++++|..||...+      ..+....+...  .                       
T Consensus       180 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~--~-----------------------  228 (284)
T 2vgo_A          180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------HTETHRRIVNV--D-----------------------  228 (284)
T ss_dssp             CHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTT--C-----------------------
T ss_pred             CHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC------HhHHHHHHhcc--c-----------------------
Confidence            9999999889999999999999999999999997533      22222222210  0                       


Q ss_pred             cCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        158 HIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                       ...+...+..+.+|+.+||+.||.+|||++++++||||+
T Consensus       229 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~  267 (284)
T 2vgo_A          229 -----------------LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK  267 (284)
T ss_dssp             -----------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred             -----------------cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence                             001233445778999999999999999999999999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.95  E-value=1.8e-28  Score=186.95  Aligned_cols=167  Identities=14%  Similarity=0.155  Sum_probs=119.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~   73 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+++.||+++.++.+||+|||.+.....     ......|+
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  170 (276)
T 2yex_A           91 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT  170 (276)
T ss_dssp             EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSC
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccc
Confidence            4566665555555544433211  12  236677789999999999999999999999999986532     23455789


Q ss_pred             CcccchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         74 RQYRSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        74 ~~y~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      +.|+|||.+.+..+ +.++||||+|++++++++|..||.....     ..........   ...            .   
T Consensus       171 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~---~~~------------~---  227 (276)
T 2yex_A          171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-----SCQEYSDWKE---KKT------------Y---  227 (276)
T ss_dssp             GGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT-----TSHHHHHHHT---TCT------------T---
T ss_pred             cCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHhhh---ccc------------c---
Confidence            99999999988775 6789999999999999999999975432     1111111110   000            0   


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                            .......+..+.+|+.+||+.||++|||++|+++||||++
T Consensus       228 ----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (276)
T 2yex_A          228 ----------------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (276)
T ss_dssp             ----------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             ----------------------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence                                  0001234556789999999999999999999999999974

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=1.1e-28  Score=189.32  Aligned_cols=141  Identities=21%  Similarity=0.255  Sum_probs=102.2

Q ss_pred             ccccccccccccccccccc---CCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRS---LPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~---~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|..+++|+|++|.||++   ..++.+||+|||++.....  ......||+.|+|||++. ..++.++||||+||++++
T Consensus       139 ~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~  217 (285)
T 3is5_A          139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYF  217 (285)
T ss_dssp             HHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHH
Confidence            3667778999999999999   4468899999999986643  234558999999999975 468999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..||.+.+       ...+...... ..+...                                     ......+
T Consensus       218 ll~g~~pf~~~~-------~~~~~~~~~~-~~~~~~-------------------------------------~~~~~~~  252 (285)
T 3is5_A          218 LLTGCLPFTGTS-------LEEVQQKATY-KEPNYA-------------------------------------VECRPLT  252 (285)
T ss_dssp             HHHSSCSSCCSS-------HHHHHHHHHH-CCCCCC-------------------------------------C--CCCC
T ss_pred             HHhCCCCCCCCC-------HHHHHhhhcc-CCcccc-------------------------------------cccCcCC
Confidence            999999997533       2222211111 100000                                     0001234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+.+|+.+||+.||++|||+.|+|+||||++
T Consensus       253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            56789999999999999999999999999975

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.95  E-value=2.1e-29  Score=194.90  Aligned_cols=167  Identities=18%  Similarity=0.273  Sum_probs=121.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hccccccccccccccccccc---CCCcceEEeecCCceeccCC-CCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRS---LPPFLFDIGTYRNACWVDKH-FTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~---~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~   74 (214)
                      +|.+++.....+....+...+.  +.  ..+|..+++|+|++|.||++   +.++.+||+|||++...... .....|++
T Consensus        92 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  171 (304)
T 2jam_A           92 ELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP  171 (304)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCC
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCC
Confidence            4566666655555555433211  12  23677778999999999998   67899999999999765432 23346899


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||++.+..++.++||||+||+++++++|..||...+      .......+.+.....+.                 
T Consensus       172 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~-----------------  228 (304)
T 2jam_A          172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET------ESKLFEKIKEGYYEFES-----------------  228 (304)
T ss_dssp             CBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHCCCCCCT-----------------
T ss_pred             CccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCCCc-----------------
Confidence            9999999998889999999999999999999999997543      33333333221100000                 


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                           ......+..+.+|+.+||+.||++|||++|+|+||||+
T Consensus       229 ---------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  266 (304)
T 2jam_A          229 ---------------------PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID  266 (304)
T ss_dssp             ---------------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             ---------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccc
Confidence                                 01123456778999999999999999999999999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.95  E-value=2e-28  Score=188.70  Aligned_cols=168  Identities=18%  Similarity=0.283  Sum_probs=120.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+++.||+++.++.+||+|||.+.....  ......|++.|
T Consensus       110 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y  189 (298)
T 1phk_A          110 ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY  189 (298)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGG
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccc
Confidence            4555655554554444433211  12  236677789999999999999999999999999987643  34455789999


Q ss_pred             cchHHHhc------CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         77 RSLEVLIN------AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        77 ~aPE~~~~------~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      +|||++.+      ..++.++||||+|++++++++|..||...+      .......+.......+.             
T Consensus       190 ~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~-------------  250 (298)
T 1phk_A          190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQFGS-------------  250 (298)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCT-------------
T ss_pred             cCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc------HHHHHHHHhcCCcccCc-------------
Confidence            99999973      357889999999999999999999997533      23333333221000000             


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                               ......+..+.+|+.+||+.||++|||++|+|+||||++
T Consensus       251 -------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (298)
T 1phk_A          251 -------------------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  289 (298)
T ss_dssp             -------------------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             -------------------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhh
Confidence                                     001234557789999999999999999999999999974

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=4.9e-29  Score=196.40  Aligned_cols=138  Identities=22%  Similarity=0.271  Sum_probs=108.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc---CCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN---AGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+++..... ...+||+.|+|||++.+   ..++.++||||+||+++++++
T Consensus       170 LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~  248 (348)
T 1u5q_A          170 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  248 (348)
T ss_dssp             HHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHh
Confidence            67777899999999999999999999999999766543 44689999999999974   468899999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.+.+      ....+..+...  ..+.                                      ..+...+..+
T Consensus       249 g~~p~~~~~------~~~~~~~~~~~--~~~~--------------------------------------~~~~~~~~~l  282 (348)
T 1u5q_A          249 RKPPLFNMN------AMSALYHIAQN--ESPA--------------------------------------LQSGHWSEYF  282 (348)
T ss_dssp             SSCTTTTSC------HHHHHHHHHHS--CCCC--------------------------------------CCCTTSCHHH
T ss_pred             CCCCCCCCC------hHHHHHHHHhc--CCCC--------------------------------------CCCCCCCHHH
Confidence            999997543      33333333221  1000                                      0112334567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+||.+||+.||++|||++++++||||.
T Consensus       283 ~~li~~~l~~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          283 RNFVDSCLQKIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHHcccChhhCcCHHHHhhChhhh
Confidence            8999999999999999999999999984

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=4.3e-29  Score=194.58  Aligned_cols=158  Identities=22%  Similarity=0.409  Sum_probs=117.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccC-CCcceEEeecCCceeccCC-CCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSL-PPFLFDIGTYRNACWVDKH-FTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y   76 (214)
                      +|.+++.....+....+...+.  +.  ..+|..+++|+|++|.||+++ .++.+||+|||+++..... .....||+.|
T Consensus       135 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y  214 (320)
T 3a99_A          135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY  214 (320)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGG
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccC
Confidence            4556665555555544433211  12  236677789999999999998 6899999999999877543 3455799999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+..+ +.++||||+||+++++++|..||..         ...   +..  +..                    
T Consensus       215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~---------~~~---~~~--~~~--------------------  260 (320)
T 3a99_A          215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------DEE---IIR--GQV--------------------  260 (320)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS---------HHH---HHH--CCC--------------------
T ss_pred             CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC---------hhh---hhc--ccc--------------------
Confidence            99999998875 6789999999999999999999963         111   000  000                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                          ..+...+..+.+||.+||+.||++|||++|+++||||++
T Consensus       261 --------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~  299 (320)
T 3a99_A          261 --------------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD  299 (320)
T ss_dssp             --------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             --------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcC
Confidence                                011234456789999999999999999999999999974

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=1.9e-29  Score=202.99  Aligned_cols=133  Identities=9%  Similarity=0.025  Sum_probs=106.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHh----------cCCCCcchhhHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI----------NAGYDCSADIWSVA   97 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diws~G   97 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++..+......+| +.|+|||++.          +..++.++||||+|
T Consensus       226 ~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG  304 (413)
T 3dzo_A          226 SLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG  304 (413)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred             HHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence            367777899999999999999999999999999888776666788 9999999994          33588899999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCC
Q psy16751         98 CMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW  177 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (214)
                      |+++++++|..||...+...                . ..          ..+.                         .
T Consensus       305 vil~elltg~~Pf~~~~~~~----------------~-~~----------~~~~-------------------------~  332 (413)
T 3dzo_A          305 LAIYWIWCADLPNTDDAALG----------------G-SE----------WIFR-------------------------S  332 (413)
T ss_dssp             HHHHHHHHSSCCCCTTGGGS----------------C-SG----------GGGS-------------------------S
T ss_pred             HHHHHHHHCCCCCCCcchhh----------------h-HH----------HHHh-------------------------h
Confidence            99999999999997432100                0 00          0000                         0


Q ss_pred             ChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       178 ~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ....+..+.+||.+||+.||++|||+.++++||||+
T Consensus       333 ~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          333 CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence            112345678999999999999999999999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.95  E-value=1e-28  Score=189.07  Aligned_cols=167  Identities=20%  Similarity=0.334  Sum_probs=118.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc----ceEEeecCCceeccC--CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF----LFDIGTYRNACWVDK--HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~----~~kl~Dfg~a~~~~~--~~~~~~~   72 (214)
                      +|.+++.....+...++...+.  +.  ..+|..+++|+|++|.||++..++    .+||+|||.+.....  ......|
T Consensus        94 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  173 (283)
T 3bhy_A           94 ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG  173 (283)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CC
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCC
Confidence            4556665555554444433211  12  236667789999999999998776    899999999987643  2344578


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      ++.|+|||++.+..++.++||||+|++++++++|..||.+.+      ..+.+..+.......+...             
T Consensus       174 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~-------------  234 (283)
T 3bhy_A          174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------KQETLTNISAVNYDFDEEY-------------  234 (283)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCCCCCHHH-------------
T ss_pred             CcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------hHHHHHHhHhcccCCcchh-------------
Confidence            999999999998889999999999999999999999997543      2333333221111111100             


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                               ....+..+.+|+.+||+.||++|||+.++++||||+
T Consensus       235 -------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  270 (283)
T 3bhy_A          235 -------------------------FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK  270 (283)
T ss_dssp             -------------------------HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred             -------------------------cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence                                     022345678999999999999999999999999985

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.95  E-value=1.6e-28  Score=192.52  Aligned_cols=164  Identities=20%  Similarity=0.288  Sum_probs=120.3

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+++.||+++.++.+||+|||++.....   ......|++.
T Consensus       127 ~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  206 (335)
T 2owb_A          127 SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN  206 (335)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCS
T ss_pred             CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCcc
Confidence            3445554444444444433211  12  236677789999999999999999999999999987642   2344579999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+..++.++||||+||+++++++|..||....      ..+....+...  .                     
T Consensus       207 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~--~---------------------  257 (335)
T 2owb_A          207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKN--E---------------------  257 (335)
T ss_dssp             SCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHT--C---------------------
T ss_pred             ccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcC--C---------------------
Confidence            999999999889999999999999999999999997533      22222222110  0                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+||.+||+.||++|||++|+|+||||++
T Consensus       258 -------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~  297 (335)
T 2owb_A          258 -------------------YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS  297 (335)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             -------------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                               0112334456789999999999999999999999999853

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.95  E-value=2.3e-28  Score=190.56  Aligned_cols=169  Identities=22%  Similarity=0.324  Sum_probs=117.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc---ceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|.+++.....+....++..+.  +.  ..+|.++++|+|+++.||++..++   .+||+|||+++.....  .....||
T Consensus       100 ~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt  179 (322)
T 2ycf_A          100 ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT  179 (322)
T ss_dssp             ETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSC
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCC
Confidence            4556666555555555433211  12  236777789999999999998765   4999999999876543  2234789


Q ss_pred             CcccchHHHhc---CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         74 RQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        74 ~~y~aPE~~~~---~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      +.|+|||++.+   ..++.++||||+||+++++++|..||......     ......+........+.            
T Consensus       180 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~------------  242 (322)
T 2ycf_A          180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-----VSLKDQITSGKYNFIPE------------  242 (322)
T ss_dssp             CTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-----SCHHHHHHHTCCCCCHH------------
T ss_pred             cCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-----HHHHHHHHhCccccCch------------
Confidence            99999999863   46889999999999999999999999754321     11111111100000000            


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                                .....+..+.+|+.+||+.||++|||+.++|+||||++
T Consensus       243 --------------------------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          243 --------------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             --------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             --------------------------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence                                      00223457789999999999999999999999999974

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.95  E-value=1.2e-28  Score=188.22  Aligned_cols=138  Identities=17%  Similarity=0.275  Sum_probs=87.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.++++|+|++|.||+++.++.+||+|||.+......   .....|++.|+|||.+.+..++.++||||+|++++++++
T Consensus       128 lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  207 (278)
T 3cok_A          128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI  207 (278)
T ss_dssp             HHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHH
T ss_pred             HHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHh
Confidence            66777899999999999999999999999999876432   334578999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+..      ..+..+               ...                           ....+...+.++
T Consensus       208 g~~p~~~~~~~------~~~~~~---------------~~~---------------------------~~~~~~~~~~~~  239 (278)
T 3cok_A          208 GRPPFDTDTVK------NTLNKV---------------VLA---------------------------DYEMPSFLSIEA  239 (278)
T ss_dssp             SSCSSCCCSCC-----------C---------------CSS---------------------------CCCCCTTSCHHH
T ss_pred             CCCCCCChhHH------HHHHHH---------------hhc---------------------------ccCCccccCHHH
Confidence            99999753310      100000               000                           001123345577


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+|+.+||+.||++|||++++++||||.+
T Consensus       240 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          240 KDLIHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             HHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence            89999999999999999999999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=5e-29  Score=191.32  Aligned_cols=140  Identities=19%  Similarity=0.271  Sum_probs=98.6

Q ss_pred             cccc-ccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHH----hcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVD-KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVL----INAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~-~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~----~~~~~~~~~Diws~G~~l~  101 (214)
                      +|.+ +++|+|+||.||+++.++.+||+|||++......  .....||+.|+|||++    .+..++.++||||+||+++
T Consensus       125 lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  204 (290)
T 3fme_A          125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI  204 (290)
T ss_dssp             HHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH
T ss_pred             HhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH
Confidence            5555 7799999999999999999999999999876433  3334799999999997    3456899999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||.....     ....+......  ..+.                                      ......
T Consensus       205 ~l~~g~~p~~~~~~-----~~~~~~~~~~~--~~~~--------------------------------------~~~~~~  239 (290)
T 3fme_A          205 ELAILRFPYDSWGT-----PFQQLKQVVEE--PSPQ--------------------------------------LPADKF  239 (290)
T ss_dssp             HHHHTSCSSCCCSC-----HHHHHHHHHHS--CCCC--------------------------------------CCTTTS
T ss_pred             HHHHCCCCccccCc-----hHHHHHHHhcc--CCCC--------------------------------------cccccC
Confidence            99999999975331     23333322221  0000                                      011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +..+.+|+.+||+.||++|||++|+++||||+
T Consensus       240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence            55778999999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.2e-28  Score=191.81  Aligned_cols=164  Identities=15%  Similarity=0.226  Sum_probs=112.7

Q ss_pred             ccccccccccccccccccc----CCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHh--------cCCCCcchhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRS----LPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLI--------NAGYDCSADI   93 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~----~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~--------~~~~~~~~Di   93 (214)
                      .+|..+++|+|+||.||++    +..+.+||+|||+++.....  .....||+.|+|||++.        +..++.++||
T Consensus       127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Di  206 (319)
T 4euu_A          127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDL  206 (319)
T ss_dssp             HHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHH
T ss_pred             HHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHH
Confidence            3667778999999999998    77889999999999877533  34567999999999997        4578899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         94 WSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        94 ws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||+||+++++++|..||.+.....  ...+.+..+..  +.++. .........     ...         ..+......
T Consensus       207 wslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~--~~p~~-~~~~~~~~~-----~~~---------~~~~~~~~~  267 (319)
T 4euu_A          207 WSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIIT--GKPSG-AISGVQKAE-----NGP---------IDWSGDMPV  267 (319)
T ss_dssp             HHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHH--HCCTT-CCEEEECST-----TCC---------EEEESSCCT
T ss_pred             HHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhc--CCCcc-cchhhhccc-----CCc---------cccCccCCc
Confidence            999999999999999997543211  12333333332  22221 111110000     000         000000011


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCC
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHP  210 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp  210 (214)
                      ........+..+.+||.+||++||++|||++|+|+||
T Consensus       268 ~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             ccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            1124466778889999999999999999999999986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=4.5e-29  Score=193.92  Aligned_cols=168  Identities=22%  Similarity=0.374  Sum_probs=117.8

Q ss_pred             ccccccccccccccccccC-CCcceEEeecCCceeccC------CCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSL-PPFLFDIGTYRNACWVDK------HFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~~------~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l  100 (214)
                      +|.++++|+|++|.||+++ .++.+||+|||+++....      ......+++.|+|||.+.+ ..++.++||||+||++
T Consensus       136 lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  215 (320)
T 2i6l_A          136 IHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF  215 (320)
T ss_dssp             HHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHH
T ss_pred             HHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHH
Confidence            6677789999999999996 567999999999987642      2233467889999999987 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||.+.+      ..+.+..+....+.+..............+....    . .........       ....
T Consensus       216 ~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~-------~~~~  277 (320)
T 2i6l_A          216 AEMLTGKTLFAGAH------ELEQMQLILESIPVVHEEDRQELLSVIPVYIRND----M-TEPHKPLTQ-------LLPG  277 (320)
T ss_dssp             HHHHHSSCSSCCSS------HHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH----T-TSCCCCHHH-------HSTT
T ss_pred             HHHHhCCCCCCCCC------HHHHHHHHHHhcCCCchhhhhhhhhcCccccccc----c-cCCCCChhH-------hcch
Confidence            99999999998654      5666666766655554443322111100000000    0 000000000       1133


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+.++.+|+.+||+.||++|||++|+|+||||++
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (320)
T 2i6l_A          278 ISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI  311 (320)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred             hhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence            4567899999999999999999999999999863

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=5.1e-28  Score=187.68  Aligned_cols=158  Identities=19%  Similarity=0.378  Sum_probs=117.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccC-CCcceEEeecCCceeccC-CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSL-PPFLFDIGTYRNACWVDK-HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y   76 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+++.||+++ .++.+||+|||++..... ......|++.|
T Consensus       125 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y  204 (312)
T 2iwi_A          125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVY  204 (312)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTT
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccc
Confidence            4556666555554444433211  12  236667789999999999998 789999999999987754 34456799999


Q ss_pred             cchHHHhcCCCC-cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGYD-CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~~-~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+..+. .++||||+||+++++++|..||..         ...   +..  ..                     
T Consensus       205 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~---------~~~---~~~--~~---------------------  249 (312)
T 2iwi_A          205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER---------DQE---ILE--AE---------------------  249 (312)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS---------HHH---HHH--TC---------------------
T ss_pred             cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC---------hHH---Hhh--hc---------------------
Confidence            999999987765 589999999999999999999962         111   110  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+|+.+||+.||++|||++|+++||||++
T Consensus       250 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~  289 (312)
T 2iwi_A          250 -------------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT  289 (312)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred             -------------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence                               0112334557789999999999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.95  E-value=3.1e-28  Score=187.42  Aligned_cols=137  Identities=20%  Similarity=0.306  Sum_probs=108.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|.++++|+|+++.||+++.++.+||+|||.+.....   ......|++.|+|||.+.+..++.++||||+|++++++++
T Consensus       131 lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  210 (294)
T 2rku_A          131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV  210 (294)
T ss_dssp             HHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHH
T ss_pred             HHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHh
Confidence            6677789999999999999999999999999987642   2344578999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||....      ..+....+...  .                                        ...+...+..+
T Consensus       211 g~~p~~~~~------~~~~~~~~~~~--~----------------------------------------~~~~~~~~~~~  242 (294)
T 2rku_A          211 GKPPFETSC------LKETYLRIKKN--E----------------------------------------YSIPKHINPVA  242 (294)
T ss_dssp             SSCTTCCSS------HHHHHHHHHTT--C----------------------------------------CCCCTTSCHHH
T ss_pred             CCCCCCCCC------HHHHHHHHhhc--c----------------------------------------CCCccccCHHH
Confidence            999997533      22222221110  0                                        01123344567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+|+.+||+.||++|||++|+++||||+
T Consensus       243 ~~li~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          243 ASLIQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             HHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHHHHHcccChhhCcCHHHHhhChhee
Confidence            8999999999999999999999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.95  E-value=4.8e-28  Score=187.95  Aligned_cols=141  Identities=22%  Similarity=0.334  Sum_probs=109.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|..+++|+|++|.||+++.++.+||+|||.+......   .....|++.|+|||++.+..++.++||||+|++++++++
T Consensus       141 lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  220 (314)
T 3com_A          141 LHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE  220 (314)
T ss_dssp             HHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHh
Confidence            56677799999999999999999999999999876543   334578999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||...+      ....+..+..  +..+.                                     ...+...+..+
T Consensus       221 g~~p~~~~~------~~~~~~~~~~--~~~~~-------------------------------------~~~~~~~~~~l  255 (314)
T 3com_A          221 GKPPYADIH------PMRAIFMIPT--NPPPT-------------------------------------FRKPELWSDNF  255 (314)
T ss_dssp             SSCTTTTSC------HHHHHHHHHH--SCCCC-------------------------------------CSSGGGSCHHH
T ss_pred             CCCCCCCCC------hHHHHHHHhc--CCCcc-------------------------------------cCCcccCCHHH
Confidence            999997433      2222222111  00000                                     00112334577


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+|+.+||..||.+|||+.++++||||++
T Consensus       256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~~~  284 (314)
T 3com_A          256 TDFVKQCLVKSPEQRATATQLLQHPFVRS  284 (314)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence            89999999999999999999999999863

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=1.7e-28  Score=187.14  Aligned_cols=164  Identities=20%  Similarity=0.350  Sum_probs=111.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y   76 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+++.||+++.++.++|+|||++......  .....|++.|
T Consensus        97 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y  176 (276)
T 2h6d_A           97 ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNY  176 (276)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccc
Confidence            4556665555554444433211  22  2366677799999999999999999999999999876432  3445789999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||.+.+..+ +.++||||+|++++++++|..||....      .......+..  +.                     
T Consensus       177 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~--~~---------------------  227 (276)
T 2h6d_A          177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRG--GV---------------------  227 (276)
T ss_dssp             CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CC---------------------
T ss_pred             cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhc--Cc---------------------
Confidence            99999998765 579999999999999999999996432      1222222211  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                         ...+...+..+.+++.+||+.||++|||++|+++||||++
T Consensus       228 -------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          228 -------------------FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ  267 (276)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred             -------------------ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhcc
Confidence                               0012233456789999999999999999999999999963

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=5.3e-28  Score=186.65  Aligned_cols=141  Identities=20%  Similarity=0.249  Sum_probs=105.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceecc---CCCCCCCcCCcccchHHHh-----cCCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD---KHFTEDVQTRQYRSLEVLI-----NAGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Diws~G~~l  100 (214)
                      +|..+++|+|++|.||+++.++.+||+|||++....   .......|++.|+|||++.     +..++.++||||+||++
T Consensus       133 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il  212 (302)
T 2j7t_A          133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL  212 (302)
T ss_dssp             HHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHH
T ss_pred             HhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHH
Confidence            666778999999999999999999999999976442   2234457899999999995     45688999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||...+      ....+..+...  ..+.                                     ...+..
T Consensus       213 ~~l~~g~~p~~~~~------~~~~~~~~~~~--~~~~-------------------------------------~~~~~~  247 (302)
T 2j7t_A          213 IEMAQIEPPHHELN------PMRVLLKIAKS--DPPT-------------------------------------LLTPSK  247 (302)
T ss_dssp             HHHHHSSCTTTTSC------HHHHHHHHHHS--CCCC-------------------------------------CSSGGG
T ss_pred             HHHhcCCCCCccCC------HHHHHHHHhcc--CCcc-------------------------------------cCCccc
Confidence            99999999997533      23333222211  1000                                     001233


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+.+|+.+||+.||++|||++++++||||++
T Consensus       248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  281 (302)
T 2j7t_A          248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS  281 (302)
T ss_dssp             SCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred             cCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence            4557789999999999999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.95  E-value=7.7e-28  Score=184.24  Aligned_cols=136  Identities=20%  Similarity=0.231  Sum_probs=102.8

Q ss_pred             cccccccccccccccccccCCC-------------------cceEEeecCCceeccCCCCCCCcCCcccchHHHhcC-CC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPP-------------------FLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GY   87 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~-------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~-~~   87 (214)
                      .+|.++++|+|++|.||++..+                   ..+||+|||.+....... ...||+.|+|||++.+. .+
T Consensus       130 ~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~  208 (289)
T 1x8b_A          130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTH  208 (289)
T ss_dssp             HHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTT
T ss_pred             HHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCC
Confidence            3677778999999999999844                   489999999998776543 34799999999999876 56


Q ss_pred             CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCch
Q psy16751         88 DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL  167 (214)
Q Consensus        88 ~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (214)
                      +.++||||+||+++++++|.+++..         ......+.+  +..+                               
T Consensus       209 ~~~~Di~slG~il~~l~~~~~~~~~---------~~~~~~~~~--~~~~-------------------------------  246 (289)
T 1x8b_A          209 LPKADIFALALTVVCAAGAEPLPRN---------GDQWHEIRQ--GRLP-------------------------------  246 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCSS---------SHHHHHHHT--TCCC-------------------------------
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCcc---------hhHHHHHHc--CCCC-------------------------------
Confidence            6899999999999999999887642         122222111  0000                               


Q ss_pred             hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                              ..+...+..+.+|+.+||+.||++|||+.|+++||||++
T Consensus       247 --------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          247 --------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             --------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             --------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence                    012334567789999999999999999999999999974

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.95  E-value=1.3e-27  Score=183.74  Aligned_cols=141  Identities=20%  Similarity=0.255  Sum_probs=107.1

Q ss_pred             ccccccccccccccccccCC-CcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCC--CCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAG--YDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~--~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|+++.||+++. ++.+||+|||.+......   .....|++.|+|||++.+..  ++.++||||+|+++++
T Consensus       138 lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  217 (295)
T 2clq_A          138 LHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE  217 (295)
T ss_dssp             HHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHH
T ss_pred             HHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHH
Confidence            66677899999999999987 899999999999876432   33457899999999998753  8899999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..||....      ...............+                                       ..+...+
T Consensus       218 l~~g~~pf~~~~------~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~  252 (295)
T 2clq_A          218 MATGKPPFYELG------EPQAAMFKVGMFKVHP---------------------------------------EIPESMS  252 (295)
T ss_dssp             HHHTSCTTGGGS------SHHHHHHHHHHHCCCC---------------------------------------CCCTTSC
T ss_pred             HHHCCCCccCCC------chhHHHHhhccccccc---------------------------------------cccccCC
Confidence            999999996432      1111111111111000                                       1223445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+.+|+.+||+.||++|||++++|+||||+.
T Consensus       253 ~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          253 AEAKAFILKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence            67789999999999999999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=8.5e-29  Score=194.18  Aligned_cols=172  Identities=19%  Similarity=0.250  Sum_probs=97.5

Q ss_pred             cchhhhhccC--chhhhhHHHHHH--hh--hcccccccccccccccccccCC---CcceEEeecCCceeccCC-CCCCCc
Q psy16751          3 SIFNFFVAFG--SLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH-FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~--~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~-~~~~~~   72 (214)
                      +|.+++....  .+....+...+.  +.  ..+|..+++|+|+++.||++..   ++.+||+|||+++..... .....|
T Consensus       112 ~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  191 (336)
T 3fhr_A          112 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY  191 (336)
T ss_dssp             EHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCC
Confidence            4555655443  344444433211  12  2367777899999999999976   456999999999876533 345688


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+..++.++||||+||+++++++|..||..........  .....+.......                 
T Consensus       192 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~-----------------  252 (336)
T 3fhr_A          192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLGQYGF-----------------  252 (336)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CC-----------------
T ss_pred             CcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhcccccc-----------------
Confidence            999999999988889999999999999999999999997543211000  0000000000000                 


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                             +              .......+..+.+|+.+||+.||.+|||++|+|+||||++
T Consensus       253 -------~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          253 -------P--------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             -------C--------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             -------C--------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence                   0              0011234567889999999999999999999999999863

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.94  E-value=5e-28  Score=186.74  Aligned_cols=148  Identities=24%  Similarity=0.325  Sum_probs=104.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--------CCCCCcCCcccchHHHhc-CCCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--------FTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--------~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~   99 (214)
                      +|.++++|+|++|.||+++.++.+||+|||.+......        .....||+.|+|||++.+ ..++.++||||+||+
T Consensus       137 lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  216 (303)
T 2vwi_A          137 LHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT  216 (303)
T ss_dssp             HHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHH
T ss_pred             HHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHH
Confidence            66677799999999999999999999999998765321        234478999999999987 468999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||...+      ....+.....  +.++. ....                             ........
T Consensus       217 l~~l~~g~~pf~~~~------~~~~~~~~~~--~~~~~-~~~~-----------------------------~~~~~~~~  258 (303)
T 2vwi_A          217 AIELATGAAPYHKYP------PMKVLMLTLQ--NDPPS-LETG-----------------------------VQDKEMLK  258 (303)
T ss_dssp             HHHHHHSSCTTTTSC------GGGHHHHHHT--SSCCC-TTC----------------------------------CCCC
T ss_pred             HHHHHhCCCCCccCc------hhhHHHHHhc--cCCCc-cccc-----------------------------cccchhhh
Confidence            999999999997543      2222211111  11100 0000                             00001123


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ..+..+.+|+.+||+.||++|||+.++++||||++
T Consensus       259 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          259 KYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             hhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence            34557789999999999999999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.94  E-value=1.4e-27  Score=183.99  Aligned_cols=141  Identities=19%  Similarity=0.258  Sum_probs=98.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-----------------CCCCCCcCCcccchHHHhcC-CCCc
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----------------HFTEDVQTRQYRSLEVLINA-GYDC   89 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----------------~~~~~~~~~~y~aPE~~~~~-~~~~   89 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||.+.....                 ......|++.|+|||++.+. .++.
T Consensus       131 ~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  210 (303)
T 1zy4_A          131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE  210 (303)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCT
T ss_pred             HHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcc
Confidence            36777789999999999999999999999999986532                 12344789999999999876 6899


Q ss_pred             chhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhh
Q psy16751         90 SADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS  169 (214)
Q Consensus        90 ~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (214)
                      ++||||+||+++++++   ||.....     .......+.......+.                                
T Consensus       211 ~~Di~slG~il~~l~~---p~~~~~~-----~~~~~~~~~~~~~~~~~--------------------------------  250 (303)
T 1zy4_A          211 KIDMYSLGIIFFEMIY---PFSTGME-----RVNILKKLRSVSIEFPP--------------------------------  250 (303)
T ss_dssp             HHHHHHHHHHHHHHHS---CCSSHHH-----HHHHHHHHHSTTCCCCT--------------------------------
T ss_pred             hhhHHHHHHHHHHHHh---ccCCchh-----HHHHHHhccccccccCc--------------------------------
Confidence            9999999999999997   4431100     11111111110000000                                


Q ss_pred             HHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                            ..+...+..+.+|+.+||+.||.+|||+.++++||||+.
T Consensus       251 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          251 ------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             ------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             ------cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence                  012344456789999999999999999999999999963

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.94  E-value=9.4e-28  Score=194.31  Aligned_cols=143  Identities=20%  Similarity=0.264  Sum_probs=102.9

Q ss_pred             cccccccccccccccccccCCC-------------cceEEeecCCceeccCC-------CCCCCcCCcccchHHHhc---
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPP-------------FLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLIN---   84 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~-------------~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~---   84 (214)
                      .+|.++++|+|+||+||+++..             +.+||+|||+|+.....       ....+||+.|+|||++.+   
T Consensus       130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  209 (434)
T 2rio_A          130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN  209 (434)
T ss_dssp             HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCT
T ss_pred             HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccc
Confidence            3666778999999999999654             48999999999877532       223579999999999976   


Q ss_pred             ----CCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccC
Q psy16751         85 ----AGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHI  159 (214)
Q Consensus        85 ----~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (214)
                          ..++.++||||+||+++++++ |..||....      ...  ..+..  +....                      
T Consensus       210 ~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~~--~~i~~--~~~~~----------------------  257 (434)
T 2rio_A          210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY------SRE--SNIIR--GIFSL----------------------  257 (434)
T ss_dssp             TSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT------THH--HHHHH--TCCCC----------------------
T ss_pred             cccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch------hhH--HHHhc--CCCCc----------------------
Confidence                468899999999999999998 889996422      111  11111  11000                      


Q ss_pred             CCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        160 PGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +...           ...+...+.++.+|+.+||+.||++|||+.++++||||.
T Consensus       258 ~~~~-----------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          258 DEMK-----------CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             CCCT-----------TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             cccc-----------ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            0000           001245567889999999999999999999999999996

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=7.9e-28  Score=194.52  Aligned_cols=142  Identities=17%  Similarity=0.188  Sum_probs=101.0

Q ss_pred             cccccccccccccccccccCC-----CcceEEeecCCceeccC------CCCCCCcCCcccchHHHhc---CCCCcchhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-----PFLFDIGTYRNACWVDK------HFTEDVQTRQYRSLEVLIN---AGYDCSADI   93 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-----~~~~kl~Dfg~a~~~~~------~~~~~~~~~~y~aPE~~~~---~~~~~~~Di   93 (214)
                      .+|.++++|+|+||+||++..     ...+||+|||+|+....      .....+||+.|+|||++.+   ..++.++||
T Consensus       133 ~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Di  212 (432)
T 3p23_A          133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI  212 (432)
T ss_dssp             HHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHH
T ss_pred             HHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHH
Confidence            366677899999999999953     23678999999987642      2334579999999999984   467889999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHH
Q psy16751         94 WSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV  172 (214)
Q Consensus        94 ws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (214)
                      ||+||+++++++ |..||....       ..+...   ..+......                                 
T Consensus       213 wSlG~il~ellt~g~~pf~~~~-------~~~~~~---~~~~~~~~~---------------------------------  249 (432)
T 3p23_A          213 FSAGCVFYYVISEGSHPFGKSL-------QRQANI---LLGACSLDC---------------------------------  249 (432)
T ss_dssp             HHHHHHHHHHHTTSCBTTBSTT-------THHHHH---HTTCCCCTT---------------------------------
T ss_pred             HHHHHHHHHHHcCCCCCcchhh-------HHHHHH---HhccCCccc---------------------------------
Confidence            999999999999 888885322       111111   111110000                                 


Q ss_pred             hhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       173 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                        .......+..+.+||.+||+.||++|||++++++||||.+
T Consensus       250 --~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          250 --LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             --SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             --cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence              0011234556789999999999999999999999999964

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=3.2e-28  Score=188.89  Aligned_cols=167  Identities=15%  Similarity=0.172  Sum_probs=113.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~   72 (214)
                      +|.+++.....+....+...+.  +.  ..+|..+++|+|+|+.||+++.++.+||+|||+++.....      ....+|
T Consensus       102 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g  181 (311)
T 3ork_A          102 TLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG  181 (311)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCc
Confidence            3455555444454444433211  12  2366777899999999999999999999999999866432      223478


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+..++.++||||+||+++++++|..||.+.+      ........... ...+...             
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~-~~~~~~~-------------  241 (311)
T 3ork_A          182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVRE-DPIPPSA-------------  241 (311)
T ss_dssp             CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHC-CCCCHHH-------------
T ss_pred             CcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhcC-CCCCccc-------------
Confidence            999999999999999999999999999999999999997543      23333222221 1111100             


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                              .....+.++.+|+.+||+.||.+||++.++|+|+|++
T Consensus       242 ------------------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          242 ------------------------RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             ------------------------HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ------------------------ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence                                    0123455778999999999999999999999998864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=1e-27  Score=186.18  Aligned_cols=165  Identities=15%  Similarity=0.290  Sum_probs=111.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~   73 (214)
                      +|.+++.....+....+...+.  +.  ..+|..+++|+|+++.||++. ++.+||+|||++......     .....|+
T Consensus       113 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt  191 (313)
T 3cek_A          113 DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGT  191 (313)
T ss_dssp             EHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CC
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCC
Confidence            4556666555554444432111  22  236777789999999999996 589999999999876432     2344789


Q ss_pred             CcccchHHHhc-----------CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhc
Q psy16751         74 RQYRSLEVLIN-----------AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQS  142 (214)
Q Consensus        74 ~~y~aPE~~~~-----------~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  142 (214)
                      +.|+|||.+.+           ..++.++||||+||+++++++|..||.....     ....+.   ........     
T Consensus       192 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~---~~~~~~~~-----  258 (313)
T 3cek_A          192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLH---AIIDPNHE-----  258 (313)
T ss_dssp             GGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHH---HHHCTTSC-----
T ss_pred             CCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHH---HHHhcccc-----
Confidence            99999999976           3688899999999999999999999964321     112221   11111000     


Q ss_pred             cCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        143 GHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                                      ...+...+..+.+|+.+||+.||++|||++|+|+||||+
T Consensus       259 --------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          259 --------------------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             --------------------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             --------------------------------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence                                            001222345678999999999999999999999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.94  E-value=1e-27  Score=188.61  Aligned_cols=158  Identities=17%  Similarity=0.201  Sum_probs=110.1

Q ss_pred             ccc-cccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCcccchHHHhcC-CCCc-chhhHHHHHHHHHHh
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYRSLEVLINA-GYDC-SADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~-~~Diws~G~~l~~l~  104 (214)
                      +|. .+++|+|++|.||+++.++.+||+|||.+..... ......|++.|+|||++.+. .++. ++||||+||++++++
T Consensus       167 lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~  246 (348)
T 2pml_X          167 IHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF  246 (348)
T ss_dssp             HHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH
T ss_pred             HhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH
Confidence            555 6679999999999999999999999999987643 34456899999999999987 5766 999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.....     ..+....+.......+..   .    ..+      .   .......       ........+..
T Consensus       247 ~g~~pf~~~~~-----~~~~~~~i~~~~~~~~~~---~----~~~------~---~~~~~~~-------~~~~~~~~~~~  298 (348)
T 2pml_X          247 YNVVPFSLKIS-----LVELFNNIRTKNIEYPLD---R----NHF------L---YPLTNKK-------STCSNNFLSNE  298 (348)
T ss_dssp             HSSCSSCCSSC-----SHHHHHHHTSCCCCCCCS---S----SSS------T---TTTCC---------------CCCHH
T ss_pred             hCCCCCCCCCc-----HHHHHHHHhccCcCCccc---h----hhh------h---ccccccc-------cccchhhcCHH
Confidence            99999975441     133332222110000000   0    000      0   0000000       00012345567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+|+.+||+.||.+|||++|+++||||++
T Consensus       299 l~~li~~~L~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          299 DIDFLKLFLRKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence            889999999999999999999999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=7.5e-28  Score=187.79  Aligned_cols=140  Identities=18%  Similarity=0.276  Sum_probs=101.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHh-----cCCCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLI-----NAGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~-----~~~~~~~~Diws~G~~l  100 (214)
                      +|.++++|+|++|.||+++.++.+||+|||++......   .....|++.|+|||++.     +..++.++||||+||++
T Consensus       145 lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il  224 (326)
T 2x7f_A          145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA  224 (326)
T ss_dssp             HHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHH
T ss_pred             HHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHH
Confidence            66677899999999999999999999999999876432   33457899999999997     44688999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||...+      ....+..+.+  +..+.                                      .....
T Consensus       225 ~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~~--------------------------------------~~~~~  258 (326)
T 2x7f_A          225 IEMAEGAPPLCDMH------PMRALFLIPR--NPAPR--------------------------------------LKSKK  258 (326)
T ss_dssp             HHHHHSSCTTTTSC------HHHHHHHHHH--SCCCC--------------------------------------CSCSC
T ss_pred             HHHHhCCCCCCCCc------HHHHHHHhhc--Ccccc--------------------------------------CCccc
Confidence            99999999996433      2333222211  00000                                      01123


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+.+||.+||..||.+|||++++++||||++
T Consensus       259 ~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~  292 (326)
T 2x7f_A          259 WSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD  292 (326)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred             cCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence            3457789999999999999999999999999863

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=184.98  Aligned_cols=139  Identities=19%  Similarity=0.286  Sum_probs=108.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCC--CCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAG--YDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~--~~~~~Diws~G~~l  100 (214)
                      .+|.++++|+|+++.||+++.++.+||+|||.+......     .....|++.|+|||++.+..  ++.++||||+||++
T Consensus       124 ~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  203 (305)
T 2wtk_C          124 YLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL  203 (305)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHH
T ss_pred             HHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHH
Confidence            367777899999999999999999999999999876422     23457899999999998754  37799999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||.+.+      .......+..  +.                                        ...+..
T Consensus       204 ~~l~~g~~p~~~~~------~~~~~~~i~~--~~----------------------------------------~~~~~~  235 (305)
T 2wtk_C          204 YNITTGLYPFEGDN------IYKLFENIGK--GS----------------------------------------YAIPGD  235 (305)
T ss_dssp             HHHHHSSCSCCCSS------HHHHHHHHHH--CC----------------------------------------CCCCSS
T ss_pred             HHHHhCCCCCCCch------HHHHHHHHhc--CC----------------------------------------CCCCCc
Confidence            99999999997533      2222222211  00                                        012233


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+..+.+|+.+||+.||++|||++|+++||||++
T Consensus       236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  269 (305)
T 2wtk_C          236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK  269 (305)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence            4557789999999999999999999999999863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.94  E-value=7e-27  Score=181.30  Aligned_cols=134  Identities=10%  Similarity=0.085  Sum_probs=96.9

Q ss_pred             ccccc--cccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDK--HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~--~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..+  ++|+|+||+||+++.++.+||+|||+++.....   .....||+.|+|||++.+..++.++||||+||+++++
T Consensus       153 LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  232 (309)
T 3p86_A          153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL  232 (309)
T ss_dssp             HHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHH
Confidence            66667  899999999999999999999999999865433   3445899999999999999999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||...+      ..+....+... ..                                       ....+...+.
T Consensus       233 ltg~~Pf~~~~------~~~~~~~~~~~-~~---------------------------------------~~~~~~~~~~  266 (309)
T 3p86_A          233 ATLQQPWGNLN------PAQVVAAVGFK-CK---------------------------------------RLEIPRNLNP  266 (309)
T ss_dssp             HHCCCTTTTSC------HHHHHHHHHHS-CC---------------------------------------CCCCCTTSCH
T ss_pred             HhCCCCCCCCC------HHHHHHHHHhc-CC---------------------------------------CCCCCccCCH
Confidence            99999997543      22222222110 00                                       0012344556


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+|+.+||+.||.+|||++++++
T Consensus       267 ~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          267 QVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            7889999999999999999999986

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=1.4e-26  Score=178.24  Aligned_cols=166  Identities=8%  Similarity=0.041  Sum_probs=115.8

Q ss_pred             cchhhhhccCc-hhhhhHHHHHH--hhh--cccccccccccccccccccCCCcc-----eEEeecCCceeccCC------
Q psy16751          3 SIFNFFVAFGS-LEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFL-----FDIGTYRNACWVDKH------   66 (214)
Q Consensus         3 ~l~~~~~~~~~-~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~-----~kl~Dfg~a~~~~~~------   66 (214)
                      +|.+++....+ +...++...+.  +..  .+|.++++|+|++|+||+++.++.     +||+|||+++.....      
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~  170 (298)
T 1csn_A           91 SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI  170 (298)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC
T ss_pred             CHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccc
Confidence            45556554333 44444432211  222  367777899999999999987765     999999999876432      


Q ss_pred             ----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhc
Q psy16751         67 ----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQS  142 (214)
Q Consensus        67 ----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  142 (214)
                          .....||+.|+|||++.+..++.++||||+||+++++++|..||.+.+..   .....+..+......++...   
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~---  244 (298)
T 1csn_A          171 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA---TNKQKYERIGEKKQSTPLRE---  244 (298)
T ss_dssp             CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC---CHHHHHHHHHHHHHHSCHHH---
T ss_pred             cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc---ccHHHHHHHHhhccCccHHH---
Confidence                23457999999999999989999999999999999999999999754321   13333333332211111100   


Q ss_pred             cCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        143 GHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                                        .....+..+.+|+.+||+.||++|||++++++
T Consensus       245 ----------------------------------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          245 ----------------------------------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             ----------------------------------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ----------------------------------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                                              01234567789999999999999999999874

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.94  E-value=8.4e-27  Score=179.29  Aligned_cols=141  Identities=13%  Similarity=0.063  Sum_probs=105.5

Q ss_pred             ccccccccccccccccccc---CCCcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchhhH
Q psy16751         28 ACWVDKHFTEDVQTRQYRS---LPPFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSADIW   94 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~---~~~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Diw   94 (214)
                      .+|.++++|+|+||+||++   +.++.+||+|||+++.....          .....||+.|+|||++.+..++.++|||
T Consensus       120 ~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 4hgt_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             HHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             HHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHH
Confidence            3677778999999999999   67899999999999877432          2245789999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         95 SVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+||+++++++|..||.+.+...   ....+..+.......+...                                   
T Consensus       200 slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~-----------------------------------  241 (296)
T 4hgt_A          200 SLGYVLMYFNLGSLPWQGLKAAT---KRQKYERISEKKMSTPIEV-----------------------------------  241 (296)
T ss_dssp             HHHHHHHHHHHSSCTTSSCCCSS---SSSHHHHHHHHHHHSCHHH-----------------------------------
T ss_pred             HHHHHHHHHhcCCCCCcccchhh---hhhhhhhhhcccccchhhh-----------------------------------
Confidence            99999999999999997644322   1122222221111111100                                   


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                        .....+..+.+|+.+||+.||++|||++++++
T Consensus       242 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          242 --LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             --HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             --hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence              01223457789999999999999999999875

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=2.5e-27  Score=183.07  Aligned_cols=139  Identities=22%  Similarity=0.290  Sum_probs=109.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      .+|..+++|+|+++.||+++.++.+||+|||++......   .....|++.|+|||++.+..++.++||||+|+++++++
T Consensus       134 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  213 (303)
T 3a7i_A          134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA  213 (303)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHc
Confidence            366777899999999999999999999999999876542   33457899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||....      .......+.+  +.++                                       ..+...+..
T Consensus       214 ~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~~~~  246 (303)
T 3a7i_A          214 RGEPPHSELH------PMKVLFLIPK--NNPP---------------------------------------TLEGNYSKP  246 (303)
T ss_dssp             HSSCTTTTSC------HHHHHHHHHH--SCCC---------------------------------------CCCSSCCHH
T ss_pred             cCCCCCCCcC------HHHHHHHhhc--CCCC---------------------------------------CCccccCHH
Confidence            9999997433      2222222211  0000                                       012234456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +.+|+.+||+.||++|||+.++++||||.
T Consensus       247 l~~li~~~l~~dp~~Rps~~~ll~~~~~~  275 (303)
T 3a7i_A          247 LKEFVEACLNKEPSFRPTAKELLKHKFIL  275 (303)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhChhhh
Confidence            78999999999999999999999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=1.2e-27  Score=183.68  Aligned_cols=166  Identities=22%  Similarity=0.361  Sum_probs=116.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCC---cceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPP---FLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~---~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|.+++.....+....+...+.  +.  ..+|..+++|+|++|.||+++.+   +.+||+|||++......  .....|+
T Consensus       107 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~  186 (287)
T 2wei_A          107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT  186 (287)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHH
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCc
Confidence            4555555555555444433211  12  23677778999999999999654   47999999999866433  2344688


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||.+.+ .++.++||||+|++++++++|..||.+.+      ..+.+..+..  +..+..               
T Consensus       187 ~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~~~---------------  242 (287)
T 2wei_A          187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVET--GKYAFD---------------  242 (287)
T ss_dssp             HTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CCCCCC---------------
T ss_pred             ccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc--CCCCCC---------------
Confidence            89999999876 48999999999999999999999997543      2333332221  110000               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                 .          ......+..+.+|+.+||+.||++|||+.|+|+||||+
T Consensus       243 -----------~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~  281 (287)
T 2wei_A          243 -----------L----------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ  281 (287)
T ss_dssp             -----------S----------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             -----------c----------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHh
Confidence                       0          00022345678999999999999999999999999985

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=1.1e-26  Score=178.17  Aligned_cols=137  Identities=13%  Similarity=0.093  Sum_probs=104.6

Q ss_pred             cccccc--cccccccccccccCCCcc-----eEEeecCCceeccCCCCCCCcCCcccchHHHhc--CCCCcchhhHHHHH
Q psy16751         28 ACWVDK--HFTEDVQTRQYRSLPPFL-----FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN--AGYDCSADIWSVAC   98 (214)
Q Consensus        28 ~~~~~~--~~h~d~k~~nil~~~~~~-----~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~   98 (214)
                      .+|.++  ++|+|++|+||++..++.     +||+|||+++..........||+.|+|||++.+  ..++.++||||+||
T Consensus       137 ~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~  216 (287)
T 4f0f_A          137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM  216 (287)
T ss_dssp             HHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHH
T ss_pred             HHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHH
Confidence            366777  899999999999987776     999999999877666666789999999999953  35788999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751         99 MAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus        99 ~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      +++++++|..||...+.    ........+ ...+..+                                       ..+
T Consensus       217 ~l~~l~~g~~pf~~~~~----~~~~~~~~~-~~~~~~~---------------------------------------~~~  252 (287)
T 4f0f_A          217 ILYTILTGEGPFDEYSY----GKIKFINMI-REEGLRP---------------------------------------TIP  252 (287)
T ss_dssp             HHHHHHHSSCTTTTCCC----CHHHHHHHH-HHSCCCC---------------------------------------CCC
T ss_pred             HHHHHHcCCCCCccccc----cHHHHHHHH-hccCCCC---------------------------------------CCC
Confidence            99999999999975431    111112211 1111100                                       122


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..++..+.+|+.+||+.||.+|||++++++
T Consensus       253 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            345567889999999999999999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=2.3e-27  Score=181.10  Aligned_cols=138  Identities=20%  Similarity=0.292  Sum_probs=105.2

Q ss_pred             ccccc-----cccccccccccccCCCcceEEeecCCceeccCCC---CCCCcCCcccchHHHhcCCCCcchhhHHHHHHH
Q psy16751         29 CWVDK-----HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---TEDVQTRQYRSLEVLINAGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~-----~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l  100 (214)
                      +|...     ++|+|+++.||+++.++.+||+|||.++......   ....|++.|+|||++.+..++.++||||+|+++
T Consensus       127 lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  206 (279)
T 2w5a_A          127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL  206 (279)
T ss_dssp             HHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHH
T ss_pred             HhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHH
Confidence            55555     8999999999999999999999999997664332   234789999999999998899999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||...+      .......+..  +..+                                       ..+..
T Consensus       207 ~~l~~g~~p~~~~~------~~~~~~~i~~--~~~~---------------------------------------~~~~~  239 (279)
T 2w5a_A          207 YELCALMPPFTAFS------QKELAGKIRE--GKFR---------------------------------------RIPYR  239 (279)
T ss_dssp             HHHHHSSCSSCCSS------HHHHHHHHHH--TCCC---------------------------------------CCCTT
T ss_pred             HHHHHCCCCCcccC------HHHHHHHHhh--cccc---------------------------------------cCCcc
Confidence            99999999997533      2222222211  1100                                       01233


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+..+.+++.+||+.||++|||++|+++|+|+.
T Consensus       240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          240 YSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence            455778999999999999999999999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=3.6e-27  Score=183.20  Aligned_cols=141  Identities=18%  Similarity=0.245  Sum_probs=98.9

Q ss_pred             ccc-cccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHh-----cCCCCcchhhHHHHHHH
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLI-----NAGYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~-----~~~~~~~~Diws~G~~l  100 (214)
                      +|. ++++|+|+++.||+++.++.+||+|||++.....  ......|++.|+|||++.     +..++.++||||+||++
T Consensus       140 lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il  219 (318)
T 2dyl_A          140 LKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL  219 (318)
T ss_dssp             HHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHH
T ss_pred             HHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHH
Confidence            454 3679999999999999999999999999976643  233457999999999995     44688999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..||.....     ..+.+..+...  ..+.                     .                .....
T Consensus       220 ~~l~~g~~pf~~~~~-----~~~~~~~~~~~--~~~~---------------------~----------------~~~~~  255 (318)
T 2dyl_A          220 VELATGQFPYKNCKT-----DFEVLTKVLQE--EPPL---------------------L----------------PGHMG  255 (318)
T ss_dssp             HHHHHSSCTTTTCCS-----HHHHHHHHHHS--CCCC---------------------C----------------CSSSC
T ss_pred             HHHHhCCCCCCCCCc-----cHHHHHHHhcc--CCCC---------------------C----------------CccCC
Confidence            999999999975321     23333333221  1000                     0                00122


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      .+..+.+|+.+||+.||.+|||++++++||||+
T Consensus       256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (318)
T 2dyl_A          256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK  288 (318)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhhCHHHH
Confidence            345678999999999999999999999999985

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=3.1e-26  Score=179.11  Aligned_cols=139  Identities=13%  Similarity=0.078  Sum_probs=105.0

Q ss_pred             ccccccccccccccccccCCCcc-----eEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFL-----FDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSADI   93 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~-----~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di   93 (214)
                      +|.++++|+|+||+||+++.++.     +||+|||+|+.....          .....||+.|+|||++.+..++.++||
T Consensus       121 LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  200 (330)
T 2izr_A          121 VHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDL  200 (330)
T ss_dssp             HHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred             HHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHH
Confidence            67777899999999999998887     999999999876432          235589999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         94 WSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        94 ws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||+||+++++++|..||.+.+...   ..+.+..+.......+....                                 
T Consensus       201 ~slG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~~~---------------------------------  244 (330)
T 2izr_A          201 EALGHMFMYFLRGSLPWQGLKADT---LKERYQKIGDTKRATPIEVL---------------------------------  244 (330)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCCCSS---HHHHHHHHHHHHHHSCHHHH---------------------------------
T ss_pred             HHHHHHHHHHhcCCCCcccccccc---HHHHHHHHHhhhccCCHHHH---------------------------------
Confidence            999999999999999998643211   23333333222111111100                                 


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                          ....+ ++.+++.+||..||.+||+++++++
T Consensus       245 ----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          245 ----CENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             ----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                11233 7889999999999999999988875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=7.9e-27  Score=181.82  Aligned_cols=139  Identities=14%  Similarity=0.192  Sum_probs=98.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|..+++|+|+||+||+++.++.+||+|||+++.....     .....+++.|+|||.+.+..++.++||||+||++++
T Consensus       152 ~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  231 (323)
T 3qup_A          152 YLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWE  231 (323)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHH
Confidence            366777899999999999999999999999999866432     123356778999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ..+....+...  ..                                       ...+...
T Consensus       232 ll~~g~~p~~~~~------~~~~~~~~~~~--~~---------------------------------------~~~~~~~  264 (323)
T 3qup_A          232 IMTRGQTPYAGIE------NAEIYNYLIGG--NR---------------------------------------LKQPPEC  264 (323)
T ss_dssp             HHTTSCCTTTTCC------GGGHHHHHHTT--CC---------------------------------------CCCCTTC
T ss_pred             HHhCCCCCccccC------hHHHHHHHhcC--CC---------------------------------------CCCCCcc
Confidence            999 899997544      22222222110  00                                       0112344


Q ss_pred             HHHHHHHHHHccccCCCCCCC-------HHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRAT-------AADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t-------~~e~l~hp~f~  213 (214)
                      +..+.+|+.+||+.||++|||       .+++++|||+.
T Consensus       265 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~  303 (323)
T 3qup_A          265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL  303 (323)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence            567889999999999999999       77788999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.94  E-value=2.2e-26  Score=177.05  Aligned_cols=141  Identities=13%  Similarity=0.057  Sum_probs=105.4

Q ss_pred             cccccccccccccccccccC---CCcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchhhH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSL---PPFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSADIW   94 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~---~~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Diw   94 (214)
                      .+|.++++|+|++|.||++.   .++.+||+|||++......          .....||+.|+|||.+.+..++.++|||
T Consensus       120 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 3uzp_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             HHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhH
Confidence            36777789999999999994   7889999999999876532          2345799999999999998999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         95 SVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+||+++++++|..||.......   ....+..+.......+...                                   
T Consensus       200 slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~-----------------------------------  241 (296)
T 3uzp_A          200 SLGYVLMYFNLGSLPWQGLKAAT---KRQKYERISEKKMSTPIEV-----------------------------------  241 (296)
T ss_dssp             HHHHHHHHHHHSSCTTSSCCCSS---SSSHHHHHHHHHHHSCHHH-----------------------------------
T ss_pred             HHHHHHHHHHhCCCCCCCcCchh---hhhhhhhhcccccCCchHH-----------------------------------
Confidence            99999999999999997543222   2222222222111111100                                   


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                        .....+..+.+|+.+||+.||++|||++++++
T Consensus       242 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          242 --LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             --HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             --HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence              01234457789999999999999999999875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.93  E-value=1.2e-26  Score=179.00  Aligned_cols=142  Identities=14%  Similarity=0.147  Sum_probs=100.7

Q ss_pred             ccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcC------CCCcchhhHHHH
Q psy16751         31 VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINA------GYDCSADIWSVA   97 (214)
Q Consensus        31 ~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~Diws~G   97 (214)
                      ...++|+|+||+||+++.++.+||+|||+|+.....       .....||+.|+|||++.+.      .++.++||||+|
T Consensus       131 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG  210 (301)
T 3q4u_A          131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG  210 (301)
T ss_dssp             BCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHH
Confidence            557799999999999999999999999999866432       2334899999999999876      345789999999


Q ss_pred             HHHHHHhhC----------CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCch
Q psy16751         98 CMAFELATG----------DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL  167 (214)
Q Consensus        98 ~~l~~l~~g----------~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (214)
                      |+++++++|          ..||.......  .....+.......+..+                        .... . 
T Consensus       211 ~il~el~tg~~~~~~~~~~~~pf~~~~~~~--~~~~~~~~~~~~~~~~~------------------------~~~~-~-  262 (301)
T 3q4u_A          211 LVLWEVARRMVSNGIVEDYKPPFYDVVPND--PSFEDMRKVVCVDQQRP------------------------NIPN-R-  262 (301)
T ss_dssp             HHHHHHHTTBCBTTBCCCCCCTTTTTSCSS--CCHHHHHHHHTTSCCCC------------------------CCCG-G-
T ss_pred             HHHHHHHhhhcCccccccccccccccCCCC--cchhhhhHHHhccCCCC------------------------CCCh-h-
Confidence            999999999          77775432111  11222222211100000                        0000 0 


Q ss_pred             hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                              ..+...+..+.+|+.+||+.||++|||+.++++
T Consensus       263 --------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          263 --------WFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             --------GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             --------hccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                    012345678899999999999999999999985

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.93  E-value=3.8e-26  Score=179.70  Aligned_cols=169  Identities=9%  Similarity=0.040  Sum_probs=116.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc--ceEEeecCCceeccCC----------
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF--LFDIGTYRNACWVDKH----------   66 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~--~~kl~Dfg~a~~~~~~----------   66 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+||+||+++.++  .+||+|||+|+.....          
T Consensus       137 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~  216 (345)
T 2v62_A          137 DLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENP  216 (345)
T ss_dssp             EHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCG
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhcc
Confidence            4555655554554444433211  12  236677789999999999998777  9999999999876321          


Q ss_pred             CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCc
Q psy16751         67 FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS  146 (214)
Q Consensus        67 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  146 (214)
                      .....||+.|+|||++.+..++.++||||+||+++++++|..||.....    ................+......    
T Consensus       217 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----  288 (345)
T 2v62_A          217 RKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----DPVAVQTAKTNLLDELPQSVLKW----  288 (345)
T ss_dssp             GGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----CHHHHHHHHHHHHHTTTHHHHHH----
T ss_pred             ccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----ccHHHHHHHHhhcccccHHHHhh----
Confidence            1345799999999999998899999999999999999999999964221    12222222223323333222110    


Q ss_pred             cccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        147 SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                                   ......+..+.+++.+||+.||++|||++++++
T Consensus       289 -----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          289 -----------------------------APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             -----------------------------SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -----------------------------ccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                                         001234567889999999999999999999875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.93  E-value=1.8e-26  Score=182.21  Aligned_cols=136  Identities=13%  Similarity=0.148  Sum_probs=105.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|+|+||.||+++.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||+||++++
T Consensus       208 ~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  287 (359)
T 3vhe_A          208 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  287 (359)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHH
Confidence            367777899999999999999999999999999866332     234467889999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      ..+.+.........+                                        ..+...
T Consensus       288 llt~g~~p~~~~~------~~~~~~~~~~~~~~~----------------------------------------~~~~~~  321 (359)
T 3vhe_A          288 IFSLGASPYPGVK------IDEEFCRRLKEGTRM----------------------------------------RAPDYT  321 (359)
T ss_dssp             HTTTSCCSSTTCC------CSHHHHHHHHHTCCC----------------------------------------CCCTTC
T ss_pred             HHhcCCCCCCccc------hhHHHHHHHHcCCCC----------------------------------------CCCCCC
Confidence            998 999997544      222232222211110                                        112334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||++|||++|+++|
T Consensus       322 ~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          322 TPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            5678899999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=7.9e-27  Score=182.32  Aligned_cols=135  Identities=15%  Similarity=0.176  Sum_probs=102.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+|+......     ....+|+.|+|||.+.+..++.++||||+||++++
T Consensus       132 ~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  211 (327)
T 3poz_A          132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE  211 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHH
Confidence            3667778999999999999999999999999998764321     22356778999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      . ..+.........+                                        ..+..+
T Consensus       212 llt~g~~p~~~~~------~-~~~~~~~~~~~~~----------------------------------------~~~~~~  244 (327)
T 3poz_A          212 LMTFGSKPYDGIP------A-SEISSILEKGERL----------------------------------------PQPPIC  244 (327)
T ss_dssp             HHTTSCCTTTTCC------G-GGHHHHHHTTCCC----------------------------------------CCCTTB
T ss_pred             HHhcCCCCccCCC------H-HHHHHHHHcCCCC----------------------------------------CCCccC
Confidence            999 999997543      1 1122221110000                                        112345


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||++|||+.+++++
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          245 TIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             CHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            5678899999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.93  E-value=1.5e-26  Score=180.49  Aligned_cols=135  Identities=13%  Similarity=0.129  Sum_probs=100.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++.....     .....|+..|+|||++.+..++.++||||+||++++
T Consensus       130 ~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  209 (325)
T 3kex_A          130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE  209 (325)
T ss_dssp             HHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHH
Confidence            367777899999999999999999999999999876432     233467788999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      .......+... ..+                                        ..+..+
T Consensus       210 l~~~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~  242 (325)
T 3kex_A          210 LMTFGAEPYAGLR------LAEVPDLLEKG-ERL----------------------------------------AQPQIC  242 (325)
T ss_dssp             HHTTSCCTTTTSC------TTHHHHHHHTT-CBC----------------------------------------CCCTTB
T ss_pred             HHhCCCCCccccC------HHHHHHHHHcC-CCC----------------------------------------CCCCcC
Confidence            999 999997543      11211111110 000                                        011223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||.+|||+.+++++
T Consensus       243 ~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          243 TIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             CTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3455799999999999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.93  E-value=2.2e-26  Score=182.23  Aligned_cols=143  Identities=9%  Similarity=0.023  Sum_probs=103.2

Q ss_pred             ccccccccccccccccccC--CCcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchhhHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSL--PPFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSADIWSV   96 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~--~~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~   96 (214)
                      +|...++|+|+||+||+++  .++.+||+|||+|+.....          .....||+.|+|||++.+..++.++||||+
T Consensus       168 lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  247 (364)
T 3op5_A          168 IHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEIL  247 (364)
T ss_dssp             HHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             HHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHH
Confidence            6677789999999999998  7899999999999876321          123459999999999999899999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcC
Q psy16751         97 ACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN  176 (214)
Q Consensus        97 G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (214)
                      ||+++++++|..||.+...     ..................+.                                ....
T Consensus       248 G~~l~el~~g~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~  290 (364)
T 3op5_A          248 GYCMIQWLTGHLPWEDNLK-----DPKYVRDSKIRYRENIASLM--------------------------------DKCF  290 (364)
T ss_dssp             HHHHHHHHHSCCTTGGGTT-----CHHHHHHHHHHHHHCHHHHH--------------------------------HHHS
T ss_pred             HHHHHHHHhCCCCcccccc-----CHHHHHHHHHHhhhhHHHHH--------------------------------HHhc
Confidence            9999999999999974321     11211111111100000000                                0000


Q ss_pred             CChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       177 ~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .....+.++.+|+..||..||.+|||+.++++
T Consensus       291 ~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          291 PAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            11234567889999999999999999998874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.93  E-value=3e-26  Score=177.60  Aligned_cols=136  Identities=11%  Similarity=0.038  Sum_probs=102.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----------------CCCCcCCcccchHHHhcCCCCcc
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----------------TEDVQTRQYRSLEVLINAGYDCS   90 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----------------~~~~~~~~y~aPE~~~~~~~~~~   90 (214)
                      .+|..+++|+|+||.||+++.++.+||+|||+++......                 ...+||+.|+|||++.+..++.+
T Consensus       123 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  202 (310)
T 3s95_A          123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK  202 (310)
T ss_dssp             HHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTH
T ss_pred             HHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcH
Confidence            3667778999999999999999999999999998764321                 14579999999999999899999


Q ss_pred             hhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhH
Q psy16751         91 ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV  170 (214)
Q Consensus        91 ~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (214)
                      +||||+||+++++++|..+|............. .....                                         
T Consensus       203 ~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-~~~~~-----------------------------------------  240 (310)
T 3s95_A          203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-VRGFL-----------------------------------------  240 (310)
T ss_dssp             HHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-HHHHH-----------------------------------------
T ss_pred             HHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-hhccc-----------------------------------------
Confidence            999999999999999998886432111000000 00000                                         


Q ss_pred             HHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       171 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                         ....+..++..+.+++.+||+.||++|||+.++++
T Consensus       241 ---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          241 ---DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             ---HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               00123344556789999999999999999999875

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=3.2e-26  Score=174.05  Aligned_cols=135  Identities=13%  Similarity=0.162  Sum_probs=104.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.+.++|+|++|.||+++.++.+||+|||++.....    ......+++.|+|||++.+..++.++||||+|++++++
T Consensus       121 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  200 (269)
T 4hcu_A          121 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV  200 (269)
T ss_dssp             HHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence            36677779999999999999999999999999986643    23344667789999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      ..+....+.....                                         ...+...+
T Consensus       201 l~~g~~p~~~~~------~~~~~~~~~~~~~-----------------------------------------~~~~~~~~  233 (269)
T 4hcu_A          201 FSEGKIPYENRS------NSEVVEDISTGFR-----------------------------------------LYKPRLAS  233 (269)
T ss_dssp             HTTSCCTTTTCC------HHHHHHHHHTTCC-----------------------------------------CCCCTTSC
T ss_pred             hcCCCCCCCCCC------HHHHHHHHhcCcc-----------------------------------------CCCCCcCC
Confidence            99 899997533      2222222211000                                         00123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||+.||++|||++++++|
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          234 THVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            567899999999999999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=3.6e-26  Score=181.45  Aligned_cols=135  Identities=16%  Similarity=0.208  Sum_probs=103.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|+||.||+++.++.+||+|||+++.....     .....+|+.|+|||++.+..++.++||||+||++++
T Consensus       218 ~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~e  297 (370)
T 2psq_A          218 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  297 (370)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHH
Confidence            366777899999999999999999999999999876432     223466788999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |++ |..||.+.+      ..+....+..  +..                                       ...+..+
T Consensus       298 llt~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~  330 (370)
T 2psq_A          298 IFTLGGSPYPGIP------VEELFKLLKE--GHR---------------------------------------MDKPANC  330 (370)
T ss_dssp             HHTTSCCSSTTCC------GGGHHHHHHT--TCC---------------------------------------CCCCTTS
T ss_pred             HHcCCCCCCCCCC------HHHHHHHHhc--CCC---------------------------------------CCCCCCC
Confidence            998 999997533      1222211110  000                                       0012345


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+||.+||+.||++|||+.|++++
T Consensus       331 ~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          331 TNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5678899999999999999999999863

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=2.5e-26  Score=179.55  Aligned_cols=134  Identities=16%  Similarity=0.195  Sum_probs=97.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+++.....     .....+|+.|+|||.+.+..++.++||||+||++++
T Consensus       132 ~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  211 (327)
T 3lzb_A          132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE  211 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHH
Confidence            367777899999999999999999999999999876432     223356778999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ..+ +.........                                        ...+...
T Consensus       212 ll~~g~~p~~~~~------~~~-~~~~~~~~~~----------------------------------------~~~~~~~  244 (327)
T 3lzb_A          212 LMTFGSKPYDGIP------ASE-ISSILEKGER----------------------------------------LPQPPIC  244 (327)
T ss_dssp             HHTTSCCTTTTCC------GGG-HHHHHHTTCC----------------------------------------CCCCTTB
T ss_pred             HHHCCCCCCCCCC------HHH-HHHHHHcCCC----------------------------------------CCCCccC
Confidence            999 999997543      112 1111111000                                        0112344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||+.||.+|||+.|+++
T Consensus       245 ~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          245 TIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            567789999999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.93  E-value=7.5e-27  Score=182.29  Aligned_cols=143  Identities=21%  Similarity=0.308  Sum_probs=87.6

Q ss_pred             cccc-ccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHH----hcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVD-KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVL----INAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~-~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~----~~~~~~~~~Diws~G~~l~  101 (214)
                      +|.. +++|+|+++.||+++.++.+||+|||+++.....  .....||+.|+|||++    .+..++.++||||+||+++
T Consensus       141 lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  220 (327)
T 3aln_A          141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY  220 (327)
T ss_dssp             HHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHH
T ss_pred             HhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHH
Confidence            5555 7799999999999999999999999999876432  2334799999999999    4556899999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||.....     ..+.+.       .        ...        +.....+.              ......
T Consensus       221 ~l~~g~~pf~~~~~-----~~~~~~-------~--------~~~--------~~~~~~~~--------------~~~~~~  258 (327)
T 3aln_A          221 ELATGRFPYPKWNS-----VFDQLT-------Q--------VVK--------GDPPQLSN--------------SEEREF  258 (327)
T ss_dssp             HHHHSCCCSSCC------------C-------C--------CCC--------SCCCCCCC--------------CSSCCC
T ss_pred             HHHHCCCCCCCcch-----HHHHHH-------H--------Hhc--------CCCCCCCC--------------cccccC
Confidence            99999999974321     000000       0        000        00000000              011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +..+.+|+.+||+.||++|||+.++++||||.
T Consensus       259 ~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          259 SPSFINFVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence            55778999999999999999999999999984

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.93  E-value=5.9e-26  Score=174.36  Aligned_cols=139  Identities=13%  Similarity=0.195  Sum_probs=98.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHh---cCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLI---NAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~---~~~~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|++|.||+++.++.+||+|||++.....     ......||+.|+|||++.   +..++.++||||+||+
T Consensus       135 ~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  214 (289)
T 3og7_A          135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV  214 (289)
T ss_dssp             HHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHH
T ss_pred             HHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHH
Confidence            36677789999999999999999999999999976542     223457899999999997   4568889999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..||....      ..+.+..+.......+. .                                   .....
T Consensus       215 l~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~-~-----------------------------------~~~~~  252 (289)
T 3og7_A          215 LYELMTGQLPYSNIN------NRDQIIEMVGRGSLSPD-L-----------------------------------SKVRS  252 (289)
T ss_dssp             HHHHHHSSCTTSSCC------CHHHHHHHHHHTSCCCC-T-----------------------------------TSSCT
T ss_pred             HHHHHHCCCCccccc------hHHHHHHHhcccccCcc-h-----------------------------------hhccc
Confidence            999999999997544      34444443332111100 0                                   00123


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++..+.+|+.+||+.||++|||+.++++
T Consensus       253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          253 NCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            45567889999999999999999999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=6e-26  Score=177.62  Aligned_cols=141  Identities=17%  Similarity=0.124  Sum_probs=97.6

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCCCCcc------hhhHHHHHH
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAGYDCS------ADIWSVACM   99 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~------~Diws~G~~   99 (214)
                      +++|+|+||.||+++.++.+||+|||+++.....       ....+||+.|+|||++.+..++..      +||||+||+
T Consensus       162 ~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i  241 (337)
T 3mdy_A          162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI  241 (337)
T ss_dssp             CEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred             CEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence            7799999999999999999999999999766432       234589999999999988766554      999999999


Q ss_pred             HHHHhhC----------CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhh
Q psy16751        100 AFELATG----------DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS  169 (214)
Q Consensus       100 l~~l~~g----------~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (214)
                      ++++++|          ..||.......  .............+..                        +. .+..   
T Consensus       242 l~el~tg~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~------------------------~~-~~~~---  291 (337)
T 3mdy_A          242 LWEVARRCVSGGIVEEYQLPYHDLVPSD--PSYEDMREIVCIKKLR------------------------PS-FPNR---  291 (337)
T ss_dssp             HHHHHTTBCBTTBCCCCCCTTTTTSCSS--CCHHHHHHHHTTSCCC------------------------CC-CCGG---
T ss_pred             HHHHHhccCcccccccccccHhhhcCCC--CchhhhHHHHhhhccC------------------------cc-cccc---
Confidence            9999999          45554321100  0111111111100000                        00 0000   


Q ss_pred             HHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                            .....++..+.+|+.+||+.||++|||+.+++++
T Consensus       292 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          292 ------WSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             ------GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ------chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                  0113567788999999999999999999999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.93  E-value=7.6e-26  Score=173.11  Aligned_cols=135  Identities=13%  Similarity=0.172  Sum_probs=104.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++....    ......+|+.|+|||++.+..++.++||||+|++++++
T Consensus       135 ~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l  214 (283)
T 3gen_A          135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI  214 (283)
T ss_dssp             HHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            36677789999999999999999999999999986643    22334567789999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      .......+......                                         ..+...+
T Consensus       215 ~t~g~~p~~~~~------~~~~~~~~~~~~~~-----------------------------------------~~~~~~~  247 (283)
T 3gen_A          215 YSLGKMPYERFT------NSETAEHIAQGLRL-----------------------------------------YRPHLAS  247 (283)
T ss_dssp             HTTTCCTTTTSC------HHHHHHHHHTTCCC-----------------------------------------CCCTTCC
T ss_pred             HhCCCCCccccC------hhHHHHHHhcccCC-----------------------------------------CCCCcCC
Confidence            98 999997543      22322222211000                                         0122334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+|+.+||+.||.+|||++++++|
T Consensus       248 ~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          248 EKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            567899999999999999999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.93  E-value=2.2e-26  Score=192.99  Aligned_cols=161  Identities=21%  Similarity=0.244  Sum_probs=107.6

Q ss_pred             cccccccccccccccccccCCCc---ceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|..+++|+|++|.||+++.++   .+||+|||.+......  .....||+.|+|||++.+..++.++||||+||++++
T Consensus       136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLye  215 (676)
T 3qa8_A          136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE  215 (676)
T ss_dssp             HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHH
T ss_pred             HHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHH
Confidence            36677789999999999998665   4999999999876532  345689999999999998899999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc-ccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT-KKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++|..||.+..      ...      ...+........    ...... ..+.... ...        ...........
T Consensus       216 LltG~~Pf~~~~------~~~------~~~~~i~~~~~~----~~~~~~~l~g~~~~-~~~--------lp~p~~l~~~l  270 (676)
T 3qa8_A          216 CITGFRPFLPNW------QPV------QWHGKVREKSNE----HIVVYDDLTGAVKF-SSV--------LPTPNHLSGIL  270 (676)
T ss_dssp             HHSSCSSCCSSC------HHH------HSSTTCC----------CCSCCCCSSSCCC-CSS--------SCCSCCCCGGG
T ss_pred             HHHCCCCCCccc------chh------hhhhhhhcccch----hhhhhhhhcccccc-ccc--------cCCchhhchhh
Confidence            999999997532      100      000000000000    000000 0000000 000        00011234567


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      +..+.+|+.+||++||++|||++++++||||+
T Consensus       271 s~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          271 AGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             HHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             hHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            78899999999999999999999999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=6.4e-26  Score=180.76  Aligned_cols=134  Identities=15%  Similarity=0.185  Sum_probs=103.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..+++|+|+||+||+++.++.+||+|||+|+.....     .....+|+.|+|||++.+..++.++||||+||+++++
T Consensus       207 LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el  286 (382)
T 3tt0_A          207 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI  286 (382)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHH
Confidence            66777899999999999999999999999999876432     2334677889999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+       ...+.........                                        ...+..++
T Consensus       287 lt~g~~p~~~~~-------~~~~~~~~~~~~~----------------------------------------~~~~~~~~  319 (382)
T 3tt0_A          287 FTLGGSPYPGVP-------VEELFKLLKEGHR----------------------------------------MDKPSNCT  319 (382)
T ss_dssp             HTTSCCSSTTCC-------HHHHHHHHHTTCC----------------------------------------CCCCSSCC
T ss_pred             HhCCCCCCCCCC-------HHHHHHHHHcCCC----------------------------------------CCCCccCC
Confidence            99 999997433       2222222111000                                        00123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+|+.+||+.||++|||++|++++
T Consensus       320 ~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          320 NELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            678899999999999999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=5.6e-26  Score=184.68  Aligned_cols=133  Identities=11%  Similarity=0.147  Sum_probs=102.0

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~  107 (214)
                      +|.++++|+|++++||+++.++.+||+|||+++..........+++.|+|||++.+..++.++||||+||+++++++ |.
T Consensus       305 LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~  384 (450)
T 1k9a_A          305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  384 (450)
T ss_dssp             HHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            66777899999999999999999999999999876554444577889999999999999999999999999999998 99


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||...+.      .+....+.+  |.                                       ....+..++..+.+
T Consensus       385 ~P~~~~~~------~~~~~~i~~--~~---------------------------------------~~~~p~~~~~~l~~  417 (450)
T 1k9a_A          385 VPYPRIPL------KDVVPRVEK--GY---------------------------------------KMDAPDGCPPAVYD  417 (450)
T ss_dssp             CSSTTSCT------TTHHHHHHT--TC---------------------------------------CCCCCTTCCHHHHH
T ss_pred             CCCCCCCH------HHHHHHHHc--CC---------------------------------------CCCCCCcCCHHHHH
Confidence            99975431      122222111  00                                       00123445667889


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q psy16751        188 FLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ||.+||+.||.+|||+.++++
T Consensus       418 li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          418 VMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999874

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=7.7e-26  Score=175.23  Aligned_cols=132  Identities=15%  Similarity=0.269  Sum_probs=93.0

Q ss_pred             cccccccccccccccCCCcc-eEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         32 DKHFTEDVQTRQYRSLPPFL-FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~-~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      ++++|+|+|++||++..++. +||+|||++...........||+.|+|||++.+..++.++||||+||+++++++|..||
T Consensus       124 ~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~  203 (307)
T 2eva_A          124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF  203 (307)
T ss_dssp             SCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTT
T ss_pred             CCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            45799999999999987775 79999999987766656668999999999999989999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHH
Q psy16751        111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR  190 (214)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  190 (214)
                      .....     ....+..... .+..+                                       ......+..+.+++.
T Consensus       204 ~~~~~-----~~~~~~~~~~-~~~~~---------------------------------------~~~~~~~~~l~~li~  238 (307)
T 2eva_A          204 DEIGG-----PAFRIMWAVH-NGTRP---------------------------------------PLIKNLPKPIESLMT  238 (307)
T ss_dssp             TTTCS-----SHHHHHHHHH-TTCCC---------------------------------------CCBTTCCHHHHHHHH
T ss_pred             hhhCc-----cHHHHHHHHh-cCCCC---------------------------------------CcccccCHHHHHHHH
Confidence            64331     1111111110 01100                                       011234456789999


Q ss_pred             HccccCCCCCCCHHHHhc
Q psy16751        191 PMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       191 ~~l~~dp~~R~t~~e~l~  208 (214)
                      +||+.||++|||++++++
T Consensus       239 ~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          239 RCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCChhhCcCHHHHHH
Confidence            999999999999999986

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=5.6e-26  Score=177.37  Aligned_cols=134  Identities=10%  Similarity=0.124  Sum_probs=101.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|..+++|+|+||.||+++.++.+||+|||+++......      ....+|+.|+|||++.+..++.++||||+||+++
T Consensus       166 ~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  245 (325)
T 3kul_A          166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW  245 (325)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             HHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHH
Confidence            3667778999999999999999999999999998774321      2234567899999999989999999999999999


Q ss_pred             HHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        102 ELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       102 ~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++++ |..||...+      ..+....+... ..+                                        ..+..
T Consensus       246 ell~~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~  278 (325)
T 3kul_A          246 EVLAYGERPYWNMT------NRDVISSVEEG-YRL----------------------------------------PAPMG  278 (325)
T ss_dssp             HHHTTSCCTTTTSC------HHHHHHHHHTT-CCC----------------------------------------CCCTT
T ss_pred             HHHcCCCCCcccCC------HHHHHHHHHcC-CCC----------------------------------------CCCCC
Confidence            9998 999997543      22322222211 000                                        11234


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ++..+.+|+.+||..||++|||+.++++
T Consensus       279 ~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          279 CPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            5567889999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.93  E-value=2.3e-26  Score=179.32  Aligned_cols=151  Identities=17%  Similarity=0.094  Sum_probs=100.8

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcC-----CCCcchhhHHHHHHHHH
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINA-----GYDCSADIWSVACMAFE  102 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws~G~~l~~  102 (214)
                      .++|+|+||+||+++.++.+||+|||+|+.....     ....+||+.|+|||++.+.     .++.++||||+||++++
T Consensus       151 ~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~e  230 (322)
T 3soc_A          151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE  230 (322)
T ss_dssp             EEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHH
Confidence            7899999999999999999999999999876432     2335799999999999874     35568899999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..||.+..........      ....+.+............         ...+...  .        .......+
T Consensus       231 l~tg~~pf~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~--------~~~~~~~~  285 (322)
T 3soc_A          231 LASRCTAADGPVDEYMLPFE------EEIGQHPSLEDMQEVVVHK---------KKRPVLR--D--------YWQKHAGM  285 (322)
T ss_dssp             HHTTBTTSSSCCCCCCCTTH------HHHCSSCCHHHHHHHHTTS---------CCCCCCC--G--------GGGSSHHH
T ss_pred             HHhCCCCCCCCcchhccchh------hhhccCCchhhhhhhhhcc---------cCCCCcc--c--------cccccchH
Confidence            99999999765432211110      0111111111110000000         0000000  0        00113445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+|+.+||+.||++|||++|+++
T Consensus       286 ~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          286 AMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            67899999999999999999999985

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.93  E-value=2.2e-26  Score=182.48  Aligned_cols=137  Identities=13%  Similarity=0.167  Sum_probs=104.2

Q ss_pred             cccccccccccccccccccCCCc---ceEEeecCCceecc-----CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPF---LFDIGTYRNACWVD-----KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~---~~kl~Dfg~a~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|+||+||+++.++   .+||+|||+|+...     .......||+.|+|||++.+..++.++||||+||+
T Consensus       196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~i  275 (367)
T 3l9p_A          196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  275 (367)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHH
Confidence            36777789999999999998554   59999999997552     12233467889999999999999999999999999


Q ss_pred             HHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        100 AFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       100 l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++++++ |..||...+      ..+.+..+... ..+                                        ..+
T Consensus       276 l~ellt~g~~pf~~~~------~~~~~~~i~~~-~~~----------------------------------------~~~  308 (367)
T 3l9p_A          276 LWEIFSLGYMPYPSKS------NQEVLEFVTSG-GRM----------------------------------------DPP  308 (367)
T ss_dssp             HHHHHTTSCCSSTTCC------HHHHHHHHHTT-CCC----------------------------------------CCC
T ss_pred             HHHHHhCCCCCCCCCC------HHHHHHHHHcC-CCC----------------------------------------CCC
Confidence            999998 999997543      23322222210 000                                        012


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      ..++..+.+|+.+||+.||.+|||+.+++++.+
T Consensus       309 ~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~  341 (367)
T 3l9p_A          309 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE  341 (367)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            344557789999999999999999999998743

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=6.6e-26  Score=172.14  Aligned_cols=134  Identities=10%  Similarity=0.151  Sum_probs=102.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|++|.||+++.++.++|+|||.+......    .....+++.|+|||.+.+..++.++||||+|+++++++
T Consensus       120 lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  199 (268)
T 3sxs_A          120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF  199 (268)
T ss_dssp             HHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHH
T ss_pred             HHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHH
Confidence            66777899999999999999999999999999876432    22335566799999999988999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      ..+....+...  ..                                       ...+...+.
T Consensus       200 ~~g~~p~~~~~------~~~~~~~~~~~--~~---------------------------------------~~~~~~~~~  232 (268)
T 3sxs_A          200 SLGKMPYDLYT------NSEVVLKVSQG--HR---------------------------------------LYRPHLASD  232 (268)
T ss_dssp             TTTCCTTTTSC------HHHHHHHHHTT--CC---------------------------------------CCCCTTSCH
T ss_pred             cCCCCCccccC------hHHHHHHHHcC--CC---------------------------------------CCCCCcChH
Confidence            8 999997543      22222222110  00                                       001223345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+++.+||+.||++|||+.+++++
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          233 TIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            67899999999999999999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.93  E-value=3.3e-26  Score=175.08  Aligned_cols=135  Identities=13%  Similarity=0.218  Sum_probs=94.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|+||.||+++.++.+||+|||+++.....    .....+++.|+|||++.+..++.++||||+||+++++
T Consensus       131 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  210 (281)
T 1mp8_A          131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI  210 (281)
T ss_dssp             HHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred             HHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHH
Confidence            366777899999999999999999999999999876432    2233567789999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      ..+.+..+...  ..                                       ...+...+
T Consensus       211 l~~g~~pf~~~~------~~~~~~~i~~~--~~---------------------------------------~~~~~~~~  243 (281)
T 1mp8_A          211 LMHGVKPFQGVK------NNDVIGRIENG--ER---------------------------------------LPMPPNCP  243 (281)
T ss_dssp             HTTSCCTTTTCC------GGGHHHHHHTT--CC---------------------------------------CCCCTTCC
T ss_pred             HhcCCCCCCcCC------HHHHHHHHHcC--CC---------------------------------------CCCCCCCC
Confidence            96 889997543      22222222110  00                                       01223455


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||..||++|||+.+++++
T Consensus       244 ~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          244 PTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            678899999999999999999998863

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.93  E-value=1.8e-25  Score=182.73  Aligned_cols=140  Identities=9%  Similarity=0.025  Sum_probs=104.8

Q ss_pred             cccccccccccccccccc---CCCcceEEeecCCceeccCCC----------CCCCcCCcccchHHHhcCCCCcchhhHH
Q psy16751         29 CWVDKHFTEDVQTRQYRS---LPPFLFDIGTYRNACWVDKHF----------TEDVQTRQYRSLEVLINAGYDCSADIWS   95 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~---~~~~~~kl~Dfg~a~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Diws   95 (214)
                      +|.++++|+|+|+.||++   +.++.+||+|||+++......          ....||+.|+|||++.+..++.++||||
T Consensus       119 LH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwS  198 (483)
T 3sv0_A          119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLES  198 (483)
T ss_dssp             HHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred             HHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHH
Confidence            667778999999999999   578999999999998775322          2558999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhc
Q psy16751         96 VACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY  175 (214)
Q Consensus        96 ~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (214)
                      +||++++|++|..||.+....   ...+.+..+....-......                                    
T Consensus       199 lGvil~elltG~~Pf~~~~~~---~~~~~~~~i~~~~~~~~~~~------------------------------------  239 (483)
T 3sv0_A          199 LGYVLMYFLRGSLPWQGLKAG---TKKQKYEKISEKKVATSIEA------------------------------------  239 (483)
T ss_dssp             HHHHHHHHHHSSCTTSSCCCS---SHHHHHHHHHHHHHHSCHHH------------------------------------
T ss_pred             HHHHHHHHHhCCCCCccccch---hHHHHHHHHhhccccccHHH------------------------------------
Confidence            999999999999999754421   12333333322110000000                                    


Q ss_pred             CCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       176 ~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                       ....++.++.+|+.+||+.||++||++.++++
T Consensus       240 -l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          240 -LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             -HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence             01233457789999999999999999988764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.93  E-value=5e-26  Score=179.44  Aligned_cols=168  Identities=9%  Similarity=0.036  Sum_probs=114.5

Q ss_pred             cchhhhhcc--CchhhhhHHHHHH--hh--hcccccccccccccccccccCCCc--ceEEeecCCceeccCC--------
Q psy16751          3 SIFNFFVAF--GSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPF--LFDIGTYRNACWVDKH--------   66 (214)
Q Consensus         3 ~l~~~~~~~--~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~--~~kl~Dfg~a~~~~~~--------   66 (214)
                      +|.+++...  ..+...++...+.  +.  ..+|.++++|+|+||.||+++.++  .+||+|||+++.....        
T Consensus       143 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  222 (352)
T 2jii_A          143 SLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVE  222 (352)
T ss_dssp             EHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCT
T ss_pred             CHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccc
Confidence            455555544  3444444433211  22  236777789999999999999988  9999999999866421        


Q ss_pred             --CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHH-HHhCCCChHHhhcc
Q psy16751         67 --FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII-ELLGDIPKRIIQSG  143 (214)
Q Consensus        67 --~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~  143 (214)
                        .....||+.|+|||++.+..++.++||||+||+++++++|..||.....     ....+.... .....++.. ... 
T Consensus       223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~-  295 (352)
T 2jii_A          223 GSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP-----NTEDIMKQKQKFVDKPGPF-VGP-  295 (352)
T ss_dssp             TSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-----CHHHHHHHHHHHHHSCCCE-ECT-
T ss_pred             cccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc-----CHHHHHHHHHhccCChhhh-hhh-
Confidence              1334899999999999998999999999999999999999999975331     122222222 211111100 000 


Q ss_pred             CCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        144 HRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                                     .......+..+.+|+.+||+.||++|||++++++
T Consensus       296 -------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          296 -------------------------------CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             -------------------------------TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -------------------------------ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                                           0001223467789999999999999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.93  E-value=3.9e-26  Score=175.87  Aligned_cols=163  Identities=13%  Similarity=0.127  Sum_probs=108.8

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~   74 (214)
                      +|.+++.....+....+.....  +.  ..+|..+++|+|+||.||+++.++.+||+|||+++.....    .....||+
T Consensus        97 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~  176 (294)
T 4eqm_A           97 TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV  176 (294)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CC
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCc
Confidence            4555555555554444433211  12  2367777899999999999999999999999999866432    23357999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||.+.+..++.++||||+||+++++++|..||.+.+      .........  .+..+....              
T Consensus       177 ~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~--~~~~~~~~~--------------  234 (294)
T 4eqm_A          177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET------AVSIAIKHI--QDSVPNVTT--------------  234 (294)
T ss_dssp             SSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC------HHHHHHHHH--SSCCCCHHH--------------
T ss_pred             cccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHh--hccCCCcch--------------
Confidence            9999999999999999999999999999999999997543      222221111  111111000              


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                           ......+..+.+++.+||+.||.+||+..+.+.
T Consensus       235 ---------------------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~  267 (294)
T 4eqm_A          235 ---------------------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMK  267 (294)
T ss_dssp             ---------------------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHH
T ss_pred             ---------------------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHH
Confidence                                 012344567889999999999999995444443

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.92  E-value=1.2e-25  Score=183.05  Aligned_cols=133  Identities=10%  Similarity=0.134  Sum_probs=103.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|+|++||+++.++.+||+|||+++.....    .....++..|+|||++.+..++.++||||+||+++|++
T Consensus       300 LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~  379 (454)
T 1qcf_A          300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV  379 (454)
T ss_dssp             HHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHH
Confidence            66777899999999999999999999999999876431    22335667899999999989999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+      ..+.+..+.+. ..+                                        ..+..++.
T Consensus       380 t~g~~P~~~~~------~~~~~~~i~~~-~~~----------------------------------------~~~~~~~~  412 (454)
T 1qcf_A          380 TYGRIPYPGMS------NPEVIRALERG-YRM----------------------------------------PRPENCPE  412 (454)
T ss_dssp             TTSCCSSTTCC------HHHHHHHHHHT-CCC----------------------------------------CCCTTSCH
T ss_pred             hCCCCCCCCCC------HHHHHHHHHcC-CCC----------------------------------------CCCCCCCH
Confidence            9 999997543      33333333221 000                                        01234556


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+||.+||..||++|||++++++
T Consensus       413 ~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          413 ELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHH
Confidence            7889999999999999999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=9.7e-26  Score=177.11  Aligned_cols=135  Identities=12%  Similarity=0.122  Sum_probs=104.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.++++|+|++|.||+++.++.+||+|||++.......     ....||+.|+|||++.+..++.++||||+||+++++
T Consensus       188 LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  267 (344)
T 1rjb_A          188 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI  267 (344)
T ss_dssp             HHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHH
Confidence            667778999999999999999999999999998664322     233567889999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..      ....+.........+                                        ..+...+
T Consensus       268 ~t~g~~p~~~~~------~~~~~~~~~~~~~~~----------------------------------------~~~~~~~  301 (344)
T 1rjb_A          268 FSLGVNPYPGIP------VDANFYKLIQNGFKM----------------------------------------DQPFYAT  301 (344)
T ss_dssp             TTTSCCSSTTCC------CSHHHHHHHHTTCCC----------------------------------------CCCTTCC
T ss_pred             HcCCCCCcccCC------cHHHHHHHHhcCCCC----------------------------------------CCCCCCC
Confidence            98 999997543      122222222110000                                        0123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+|+.+||+.||.+|||+.+++++
T Consensus       302 ~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          302 EEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            677899999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.92  E-value=2.6e-26  Score=183.79  Aligned_cols=162  Identities=15%  Similarity=0.238  Sum_probs=110.5

Q ss_pred             ccccccccccccccccccc----CCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhc--------CCCCcchhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRS----LPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLIN--------AGYDCSADI   93 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~----~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di   93 (214)
                      .+|..+++|+|+||+||++    +.++.+||+|||+++....  .....+||+.|+|||++.+        ..++.++||
T Consensus       127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Di  206 (396)
T 4eut_A          127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDL  206 (396)
T ss_dssp             HHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHH
T ss_pred             HHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHH
Confidence            3667778999999999998    7788899999999987643  2345689999999999986        457789999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         94 WSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        94 ws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      ||+||+++++++|..||.+.....  ...+.+..+..  +.++..+ .......     .+..         .+......
T Consensus       207 wSlG~il~el~tg~~Pf~~~~~~~--~~~~~~~~~~~--~~p~~~~-~~~~~~~-----~~~~---------~~~~~~~~  267 (396)
T 4eut_A          207 WSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIIT--GKPSGAI-SGVQKAE-----NGPI---------DWSGDMPV  267 (396)
T ss_dssp             HHHHHHHHHHHHSSCSEECTTCTT--TCHHHHHHHHH--SCCTTCC-EEEECST-----TCCE---------EEESSCCT
T ss_pred             HHHHHHHHHHHHCCCCCCCCCccc--chHHHHHHHhc--CCCcccc-hhheecc-----CCCc---------ccCccCCc
Confidence            999999999999999997543211  12333333322  3332221 1111000     0000         00000011


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ........+..+.+|+.+||++||++|+|++|+++
T Consensus       268 ~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             ccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            11234667788899999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.92  E-value=1.7e-25  Score=173.64  Aligned_cols=136  Identities=13%  Similarity=0.148  Sum_probs=104.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||+||++++
T Consensus       163 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~  242 (316)
T 2xir_A          163 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  242 (316)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHH
Confidence            367777899999999999999999999999999866432     223467888999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      ....+.........+                                        ..+...
T Consensus       243 l~t~g~~p~~~~~------~~~~~~~~~~~~~~~----------------------------------------~~~~~~  276 (316)
T 2xir_A          243 IFSLGASPYPGVK------IDEEFCRRLKEGTRM----------------------------------------RAPDYT  276 (316)
T ss_dssp             HHTTSCCSSTTCC------CSHHHHHHHHHTCCC----------------------------------------CCCTTC
T ss_pred             HHhCCCCCCcccc------hhHHHHHHhccCccC----------------------------------------CCCCCC
Confidence            998 999997543      122222222110000                                        012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||.+|||+.++++|
T Consensus       277 ~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          277 TPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5577899999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=1.1e-25  Score=172.12  Aligned_cols=135  Identities=13%  Similarity=0.165  Sum_probs=101.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||++......    .....+++.|+|||++.+..++.++||||+||+++++
T Consensus       128 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  207 (281)
T 3cc6_A          128 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI  207 (281)
T ss_dssp             HHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHH
Confidence            366777899999999999999999999999999876432    2334567789999999998999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||....      .......+... ..+                                        ..+...+
T Consensus       208 lt~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~~  240 (281)
T 3cc6_A          208 LSFGKQPFFWLE------NKDVIGVLEKG-DRL----------------------------------------PKPDLCP  240 (281)
T ss_dssp             HTTTCCTTTTSC------GGGHHHHHHHT-CCC----------------------------------------CCCTTCC
T ss_pred             HhCCCCCcccCC------hHHHHHHHhcC-CCC----------------------------------------CCCCCCC
Confidence            98 999997433      22222222110 000                                        0123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||..||++|||+.|++++
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          241 PVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            567899999999999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.92  E-value=2.1e-25  Score=173.70  Aligned_cols=151  Identities=18%  Similarity=0.155  Sum_probs=107.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||+||++++
T Consensus       154 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  233 (321)
T 2qkw_B          154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE  233 (321)
T ss_dssp             HHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHH
T ss_pred             HhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHH
Confidence            366677899999999999999999999999999865432     223468999999999999899999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..||..............   .......        . .......        +..           ........+
T Consensus       234 ll~g~~p~~~~~~~~~~~~~~~---~~~~~~~--------~-~~~~~~~--------~~~-----------~~~~~~~~~  282 (321)
T 2qkw_B          234 VLCARSAIVQSLPREMVNLAEW---AVESHNN--------G-QLEQIVD--------PNL-----------ADKIRPESL  282 (321)
T ss_dssp             HHHCCTTCSCSSSSSCCCHHHH---THHHHTT--------T-CCCSSSS--------SSC-----------TTCSCHHHH
T ss_pred             HHhCCCcccccCcHHHHHHHHH---hhhcccc--------c-cHHHhcC--------hhh-----------ccccCHHHH
Confidence            9999999975432221111100   0000000        0 0000000        000           001245667


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+++.+||+.||++|||+.|++++
T Consensus       283 ~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          283 RKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            888999999999999999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=2.6e-25  Score=172.35  Aligned_cols=136  Identities=14%  Similarity=0.142  Sum_probs=104.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++......     ....+++.|+|||++.+..++.++||||+||++++
T Consensus       160 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  239 (313)
T 1t46_A          160 FLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE  239 (313)
T ss_dssp             HHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHH
Confidence            3667778999999999999999999999999998765432     23456778999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+..      ....+.........+                                        ..+...
T Consensus       240 llt~g~~p~~~~~------~~~~~~~~~~~~~~~----------------------------------------~~~~~~  273 (313)
T 1t46_A          240 LFSLGSSPYPGMP------VDSKFYKMIKEGFRM----------------------------------------LSPEHA  273 (313)
T ss_dssp             HHTTTCCSSTTCC------SSHHHHHHHHHTCCC----------------------------------------CCCTTS
T ss_pred             HHhCCCCCCCccc------chhHHHHHhccCCCC----------------------------------------CCcccC
Confidence            998 999997543      122222222210000                                        012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||.+|||+.|++++
T Consensus       274 ~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          274 PAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            5577899999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.92  E-value=9e-26  Score=176.06  Aligned_cols=152  Identities=16%  Similarity=0.118  Sum_probs=105.0

Q ss_pred             cccc---ccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVD---KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~---~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      +|.+   +++|+|++|.||+++.++.+||+|||+++.....    .....||+.|+|||++.+..++.++||||+||+++
T Consensus       147 lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  226 (326)
T 3uim_A          147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLL  226 (326)
T ss_dssp             HHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHH
T ss_pred             HHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHH
Confidence            5555   7899999999999999999999999999876432    23346999999999999988999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||......... ....    ...        ........       .........         .....+...
T Consensus       227 ~l~~g~~pf~~~~~~~~~-~~~~----~~~--------~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~  277 (326)
T 3uim_A          227 ELITGQRAFDLARLANDD-DVML----LDW--------VKGLLKEK-------KLEALVDVD---------LQGNYKDEE  277 (326)
T ss_dssp             HHHHCCCSBCHHHHTTTS-CSBH----HHH--------HTTTTSSC-------CSTTSSCTT---------CTTSCCHHH
T ss_pred             HHHhCCCccccccccccc-chhH----HHH--------HHHHhhch-------hhhhhcChh---------hccccCHHH
Confidence            999999999521000000 0000    000        00000000       000000000         001234566


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||++|||+.|+++|
T Consensus       278 ~~~l~~li~~cl~~dP~~Rps~~ell~~  305 (326)
T 3uim_A          278 VEQLIQVALLCTQSSPMERPKMSEVVRM  305 (326)
T ss_dssp             HHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence            7889999999999999999999999976

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=1.6e-25  Score=178.09  Aligned_cols=133  Identities=14%  Similarity=0.186  Sum_probs=101.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.++++|+|++|+||+++.++.+||+|||+++......     ....+++.|+|||++.+..++.++||||+||+++|+
T Consensus       229 LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el  308 (377)
T 3cbl_A          229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET  308 (377)
T ss_dssp             HHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHH
Confidence            667778999999999999999999999999998754321     122346679999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      . ............+                                        ..+..++
T Consensus       309 ~t~g~~p~~~~~------~-~~~~~~~~~~~~~----------------------------------------~~~~~~~  341 (377)
T 3cbl_A          309 FSLGASPYPNLS------N-QQTREFVEKGGRL----------------------------------------PCPELCP  341 (377)
T ss_dssp             HTTSCCSSTTSC------H-HHHHHHHHTTCCC----------------------------------------CCCTTCC
T ss_pred             HhCCCCCCCCCC------H-HHHHHHHHcCCCC----------------------------------------CCCCCCC
Confidence            98 889997533      2 2222221110000                                        1123445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+||.+||+.||++|||++++++
T Consensus       342 ~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          342 DAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            67789999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.92  E-value=1.1e-25  Score=171.12  Aligned_cols=135  Identities=14%  Similarity=0.200  Sum_probs=96.2

Q ss_pred             ccccc---cccccccccccccCC--------CcceEEeecCCceeccCC-CCCCCcCCcccchHHHhcCCCCcchhhHHH
Q psy16751         29 CWVDK---HFTEDVQTRQYRSLP--------PFLFDIGTYRNACWVDKH-FTEDVQTRQYRSLEVLINAGYDCSADIWSV   96 (214)
Q Consensus        29 ~~~~~---~~h~d~k~~nil~~~--------~~~~kl~Dfg~a~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~   96 (214)
                      +|.+.   ++|+|++|.||++..        ++.+||+|||++...... .....|++.|+|||.+.+..++.++||||+
T Consensus       121 lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  200 (271)
T 3dtc_A          121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSY  200 (271)
T ss_dssp             HHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHH
T ss_pred             HHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHH
Confidence            45555   679999999999975        678999999999866433 334578999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcC
Q psy16751         97 ACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN  176 (214)
Q Consensus        97 G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (214)
                      |++++++++|..||.+.+      .......+..  +...                                      ..
T Consensus       201 G~~l~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~--------------------------------------~~  234 (271)
T 3dtc_A          201 GVLLWELLTGEVPFRGID------GLAVAYGVAM--NKLA--------------------------------------LP  234 (271)
T ss_dssp             HHHHHHHHHCCCTTTTSC------HHHHHHHHHT--SCCC--------------------------------------CC
T ss_pred             HHHHHHHHhCCCCCCCCC------HHHHHHhhhc--CCCC--------------------------------------CC
Confidence            999999999999997533      2222211110  0000                                      01


Q ss_pred             CChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       177 ~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+...+..+.+++.+||+.||.+|||+.|++++
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            223445678899999999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.1e-25  Score=178.93  Aligned_cols=134  Identities=15%  Similarity=0.169  Sum_probs=93.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      +|..+++|+|+||+||+++.++.+||+|||+++.....       .....+++.|+|||++.+..++.++||||+||+++
T Consensus       208 LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~  287 (373)
T 3c1x_A          208 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW  287 (373)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHH
Confidence            66777899999999999999999999999999866322       12335677899999999999999999999999999


Q ss_pred             HHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        102 ELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       102 ~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++++ |.+||...+.      .+....+..  +..                                       ...+..
T Consensus       288 ellt~~~~p~~~~~~------~~~~~~~~~--~~~---------------------------------------~~~p~~  320 (373)
T 3c1x_A          288 ELMTRGAPPYPDVNT------FDITVYLLQ--GRR---------------------------------------LLQPEY  320 (373)
T ss_dssp             HHHTTSCCSCTTSCS------SCHHHHHHT--TCC---------------------------------------CCCCTT
T ss_pred             HHHhCcCCCCCCCCH------HHHHHHHHc--CCC---------------------------------------CCCCCC
Confidence            9999 6677764331      111111111  000                                       001233


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ++..+.+++.+||+.||++|||+.+++++
T Consensus       321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          321 CPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            45577899999999999999999998863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=1.5e-25  Score=173.76  Aligned_cols=135  Identities=15%  Similarity=0.187  Sum_probs=103.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++.....     .....+++.|+|||.+.+..++.++||||+||++++
T Consensus       165 ~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  244 (314)
T 2ivs_A          165 YLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE  244 (314)
T ss_dssp             HHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHH
Confidence            367777899999999999999999999999999876432     233467788999999999889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      .......+ .. +..                                       ...+...
T Consensus       245 l~t~g~~p~~~~~------~~~~~~~~-~~-~~~---------------------------------------~~~~~~~  277 (314)
T 2ivs_A          245 IVTLGGNPYPGIP------PERLFNLL-KT-GHR---------------------------------------MERPDNC  277 (314)
T ss_dssp             HHTTSCCSSTTCC------GGGHHHHH-HT-TCC---------------------------------------CCCCTTC
T ss_pred             HHhCCCCCCCCCC------HHHHHHHh-hc-CCc---------------------------------------CCCCccC
Confidence            999 999997533      11111111 10 000                                       0012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||+.||++|||+.+++++
T Consensus       278 ~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          278 SEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            5678899999999999999999999864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2e-25  Score=171.20  Aligned_cols=134  Identities=13%  Similarity=0.159  Sum_probs=104.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|.++++|+|++|.||+++.++.+||+|||++......      .....+|+.|+|||++.+..++.++||||+||++++
T Consensus       126 lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  205 (287)
T 1u59_A          126 LEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE  205 (287)
T ss_dssp             HHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence            66777899999999999999999999999999876432      223356788999999998889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ..+....+..  +..                                       ...+...
T Consensus       206 llt~g~~p~~~~~------~~~~~~~i~~--~~~---------------------------------------~~~~~~~  238 (287)
T 1u59_A          206 ALSYGQKPYKKMK------GPEVMAFIEQ--GKR---------------------------------------MECPPEC  238 (287)
T ss_dssp             HHTTSCCTTTTCC------THHHHHHHHT--TCC---------------------------------------CCCCTTC
T ss_pred             HHcCCCCCcccCC------HHHHHHHHhc--CCc---------------------------------------CCCCCCc
Confidence            998 999997543      2222222211  000                                       0122345


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||++|||+.+++++
T Consensus       239 ~~~l~~li~~~l~~~p~~Rps~~~l~~~  266 (287)
T 1u59_A          239 PPELYALMSDCWIYKWEDRPDFLTVEQR  266 (287)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5678899999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.92  E-value=7.7e-26  Score=177.06  Aligned_cols=158  Identities=15%  Similarity=0.122  Sum_probs=102.1

Q ss_pred             ccccccccccccccCCCcceEEeecCCceeccCC-----------CCCCCcCCcccchHHHhc-------CCCCcchhhH
Q psy16751         33 KHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----------FTEDVQTRQYRSLEVLIN-------AGYDCSADIW   94 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~~~~y~aPE~~~~-------~~~~~~~Diw   94 (214)
                      +++|+|+||+||+++.++.+||+|||+++.....           ....+||+.|+|||++.+       ..++.++|||
T Consensus       140 ~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw  219 (336)
T 3g2f_A          140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY  219 (336)
T ss_dssp             CEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHH
T ss_pred             ceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchH
Confidence            7899999999999999999999999999876421           224479999999999987       3466789999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh-HHhhccCCccccccccCccccCCCCCCCchhhHHHh
Q psy16751         95 SVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPK-RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE  173 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (214)
                      |+||+++++++|..||............     .....+..+. .......      .........+.            
T Consensus       220 slG~il~ell~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~------------  276 (336)
T 3g2f_A          220 ALGLIYWEIFMRCTDLFPGESVPEYQMA-----FQTEVGNHPTFEDMQVLV------SREKQRPKFPE------------  276 (336)
T ss_dssp             HHHHHHHHHHTTBGGGSTTSCCCCCCCT-----THHHHCSSCCHHHHHHHH------TTSCCCCCCCT------------
T ss_pred             HHHHHHHHHHhcCCcCCCccchhHHHHh-----hhcccCCCchHHHHHhhh------cccccCCCCCc------------
Confidence            9999999999997666543321111110     0111111111 1000000      00000000000            


Q ss_pred             hcCCChhhHHHHHHHHHHccccCCCCCCCHHHHh------cCCCCC
Q psy16751        174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCL------QHPWLQ  213 (214)
Q Consensus       174 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l------~hp~f~  213 (214)
                      ........+..+.+||.+||+.||++|||++|++      .++|-+
T Consensus       277 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~  322 (336)
T 3g2f_A          277 AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER  322 (336)
T ss_dssp             TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred             ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence            0111234566889999999999999999999995      456654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=3.2e-25  Score=168.14  Aligned_cols=134  Identities=13%  Similarity=0.149  Sum_probs=102.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|+|++|.||+++.++.+||+|||++.....    ......+++.|+|||++.+..++.++||||+|+++++++
T Consensus       120 lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  199 (267)
T 3t9t_A          120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF  199 (267)
T ss_dssp             HHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHh
Confidence            6777789999999999999999999999999986632    223446778899999999989999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||...+      ..+....+...  ..                                       ...+...+.
T Consensus       200 ~~g~~p~~~~~------~~~~~~~i~~~--~~---------------------------------------~~~~~~~~~  232 (267)
T 3t9t_A          200 SEGKIPYENRS------NSEVVEDISTG--FR---------------------------------------LYKPRLAST  232 (267)
T ss_dssp             TTSCCTTTTCC------HHHHHHHHHTT--CC---------------------------------------CCCCTTSCH
T ss_pred             ccCCCCCCCCC------HHHHHHHHhcC--Cc---------------------------------------CCCCccCcH
Confidence            9 889987433      22222222110  00                                       001223345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+++.+||+.||++|||+++++++
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          233 HVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            67899999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.92  E-value=3.5e-25  Score=170.58  Aligned_cols=134  Identities=14%  Similarity=0.138  Sum_probs=99.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l  100 (214)
                      .+|..+++|+|++|.||+++.++.+||+|||+++.....       .....+|+.|+|||.+.+..++.++||||+|+++
T Consensus       143 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  222 (298)
T 3f66_A          143 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL  222 (298)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence            367777899999999999999999999999999866432       2234677889999999999999999999999999


Q ss_pred             HHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        101 FELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       101 ~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      +++++ +.++|...+      ..+....+.+.  ..                                       ...+.
T Consensus       223 ~~l~~~~~~~~~~~~------~~~~~~~~~~~--~~---------------------------------------~~~~~  255 (298)
T 3f66_A          223 WELMTRGAPPYPDVN------TFDITVYLLQG--RR---------------------------------------LLQPE  255 (298)
T ss_dssp             HHHHTTSCCSSTTSC------TTTHHHHHHTT--CC---------------------------------------CCCCT
T ss_pred             HHHHhCCCCCCccCC------HHHHHHHHhcC--CC---------------------------------------CCCCc
Confidence            99999 556665433      11111111110  00                                       00122


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+..+.+++.+||+.||++|||+.++++
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          256 YCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            34456789999999999999999999885

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=2.1e-25  Score=170.26  Aligned_cols=134  Identities=11%  Similarity=0.152  Sum_probs=96.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-C
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-G  106 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g  106 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||++...........+++.|+|||.+.+..++.++||||+|++++++++ |
T Consensus       132 ~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g  211 (278)
T 1byg_A          132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG  211 (278)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCC
Confidence            367777899999999999999999999999999877665555678889999999999899999999999999999998 9


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHH
Q psy16751        107 DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS  186 (214)
Q Consensus       107 ~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (214)
                      ..||...+      ..+....+..  +.                                       ....+...+..+.
T Consensus       212 ~~p~~~~~------~~~~~~~~~~--~~---------------------------------------~~~~~~~~~~~l~  244 (278)
T 1byg_A          212 RVPYPRIP------LKDVVPRVEK--GY---------------------------------------KMDAPDGCPPAVY  244 (278)
T ss_dssp             CCSCTTSC------GGGHHHHHTT--TC---------------------------------------CCCCCTTCCHHHH
T ss_pred             CCCCCCCC------HHHHHHHHhc--CC---------------------------------------CCCCcccCCHHHH
Confidence            99996433      1111111110  00                                       0001234456778


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q psy16751        187 EFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       187 ~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +++.+||..||++|||+.++++
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          245 EVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCChhhCCCHHHHHH
Confidence            9999999999999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=7.5e-25  Score=168.62  Aligned_cols=135  Identities=15%  Similarity=0.136  Sum_probs=100.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-------CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l  100 (214)
                      .+|.++++|+|+||.||+++.++.+||+|||+++....       ......+++.|+|||.+.+..++.++||||+||++
T Consensus       139 ~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  218 (298)
T 3pls_A          139 YLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL  218 (298)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             HHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHH
Confidence            36677789999999999999999999999999975532       22344678899999999998999999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++++|..++.....     .......+... ..                                        ...+..
T Consensus       219 ~~l~~g~~~~~~~~~-----~~~~~~~~~~~-~~----------------------------------------~~~~~~  252 (298)
T 3pls_A          219 WELLTRGAPPYRHID-----PFDLTHFLAQG-RR----------------------------------------LPQPEY  252 (298)
T ss_dssp             HHHHHTSCCTTTTSC-----GGGHHHHHHTT-CC----------------------------------------CCCCTT
T ss_pred             HHHhhCCCCCCccCC-----HHHHHHHhhcC-CC----------------------------------------CCCCcc
Confidence            999996555432221     12222111110 00                                        001233


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+..+.+|+.+||+.||.+|||+.++++
T Consensus       253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          253 CPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            4457789999999999999999999875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=3.1e-25  Score=186.96  Aligned_cols=159  Identities=11%  Similarity=0.139  Sum_probs=113.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~   72 (214)
                      +|.+++.....+....+...+.  +.  ..+|.++++|+|+|++||+++.++.+||+|||+|+.....      .....+
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~  534 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  534 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCC
Confidence            4666666555555444432211  11  2367777899999999999999999999999999866432      122356


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      |+.|+|||++.+..++.++||||+||+++++++ |..||.+.+      ..+....+..  +..                
T Consensus       535 t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~~~~~i~~--~~~----------------  590 (635)
T 4fl3_A          535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--GER----------------  590 (635)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TCC----------------
T ss_pred             ceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CCC----------------
Confidence            678999999999999999999999999999998 999997544      2332222221  000                


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                             ...+..++.++.+||.+||+.||++|||++++++
T Consensus       591 -----------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          591 -----------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             -----------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----------------------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                                   0123445667889999999999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=2.5e-25  Score=173.71  Aligned_cols=134  Identities=13%  Similarity=0.181  Sum_probs=100.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-  105 (214)
                      +|.++++|+|++|.||+++.++.+||+|||+++....  ......+++.|+|||++.+..++.++||||+||+++++++ 
T Consensus       158 LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  237 (327)
T 1fvr_A          158 LSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  237 (327)
T ss_dssp             HHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             HHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcC
Confidence            6677789999999999999999999999999975432  2233467788999999998889999999999999999998 


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.+.+      ..+....+..  +.                                       ....+...+..+
T Consensus       238 g~~pf~~~~------~~~~~~~~~~--~~---------------------------------------~~~~~~~~~~~l  270 (327)
T 1fvr_A          238 GGTPYCGMT------CAELYEKLPQ--GY---------------------------------------RLEKPLNCDDEV  270 (327)
T ss_dssp             SCCTTTTCC------HHHHHHHGGG--TC---------------------------------------CCCCCTTBCHHH
T ss_pred             CCCCCCCCc------HHHHHHHhhc--CC---------------------------------------CCCCCCCCCHHH
Confidence            999997533      1221111100  00                                       000123345678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+|+.+||+.||++|||+++++++
T Consensus       271 ~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          271 YDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            899999999999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=6e-25  Score=184.69  Aligned_cols=133  Identities=12%  Similarity=0.150  Sum_probs=101.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|+|++||+++.++.+||+|||+|+......      ....+++.|+|||++.+..++.++||||+||+++|
T Consensus       452 LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~e  531 (613)
T 2ozo_A          452 LEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE  531 (613)
T ss_dssp             HHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHH
Confidence            667778999999999999999999999999998664221      12245678999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ..+....+..  |..                                       ...+..+
T Consensus       532 llt~G~~Pf~~~~------~~~~~~~i~~--~~~---------------------------------------~~~p~~~  564 (613)
T 2ozo_A          532 ALSYGQKPYKKMK------GPEVMAFIEQ--GKR---------------------------------------MECPPEC  564 (613)
T ss_dssp             HHTTSCCTTTTCC------SHHHHHHHHT--TCC---------------------------------------CCCCTTC
T ss_pred             HHHCCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCCCcC
Confidence            998 999997644      3333332221  100                                       0123445


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+||.+||+.||++|||+.++++
T Consensus       565 ~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          565 PPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             CHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            667889999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.92  E-value=6e-25  Score=170.48  Aligned_cols=135  Identities=13%  Similarity=0.140  Sum_probs=98.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||++......     .....+++.|+|||.+.+..++.++||||+||++++
T Consensus       162 ~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  241 (313)
T 3brb_A          162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE  241 (313)
T ss_dssp             HHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHH
Confidence            366777899999999999999999999999999866432     223356788999999999899999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||....      .......+..  +..                                       ...+...
T Consensus       242 l~~~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------------------~~~~~~~  274 (313)
T 3brb_A          242 IATRGMTPYPGVQ------NHEMYDYLLH--GHR---------------------------------------LKQPEDC  274 (313)
T ss_dssp             HHTTSCCSSTTCC------GGGHHHHHHT--TCC---------------------------------------CCCBTTC
T ss_pred             HHhcCCCCCccCC------HHHHHHHHHc--CCC---------------------------------------CCCCccc
Confidence            999 888886543      2222222111  000                                       0012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||..||.+|||+.+++++
T Consensus       275 ~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          275 LDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5577899999999999999999999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.91  E-value=2.3e-25  Score=170.89  Aligned_cols=135  Identities=14%  Similarity=0.136  Sum_probs=101.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||++......      .....++..|+|||++.+..++.++||||+|++++
T Consensus       136 ~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  215 (291)
T 1u46_A          136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLW  215 (291)
T ss_dssp             HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             HHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHH
Confidence            367777899999999999999999999999999876432      22346777899999999988999999999999999


Q ss_pred             HHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        102 ELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       102 ~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++++ |..||.+.+      ..+.+..+... +..                                       ...+..
T Consensus       216 ~l~~~g~~p~~~~~------~~~~~~~~~~~-~~~---------------------------------------~~~~~~  249 (291)
T 1u46_A          216 EMFTYGQEPWIGLN------GSQILHKIDKE-GER---------------------------------------LPRPED  249 (291)
T ss_dssp             HHHTTSCCTTTTCC------HHHHHHHHHTS-CCC---------------------------------------CCCCTT
T ss_pred             HHHhCCCCCcccCC------HHHHHHHHHcc-CCC---------------------------------------CCCCcC
Confidence            9999 999997543      22222222110 000                                       001233


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+..+.+++.+||..||.+|||+.++++
T Consensus       250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          250 CPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            4567789999999999999999999986

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=7.7e-25  Score=168.24  Aligned_cols=159  Identities=11%  Similarity=0.155  Sum_probs=112.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~   72 (214)
                      +|.+++.....+....+.....  +.  ..+|.++++|+|++|.||+++.++.+||+|||++.......      ....+
T Consensus       103 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  182 (291)
T 1xbb_A          103 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  182 (291)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CC
T ss_pred             CHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCC
Confidence            4555665555444444422111  11  23677778999999999999999999999999998764321      22346


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      ++.|+|||.+.+..++.++||||+|++++++++ |..||...+      ..+ +...... +..                
T Consensus       183 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~-~~~~~~~-~~~----------------  238 (291)
T 1xbb_A          183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSE-VTAMLEK-GER----------------  238 (291)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHH-HHHHHHT-TCC----------------
T ss_pred             CceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC------HHH-HHHHHHc-CCC----------------
Confidence            678999999998889999999999999999999 999997533      222 2221111 000                


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                             ...+...+..+.+++.+||+.||++|||+.++++
T Consensus       239 -----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          239 -----------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             -----------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                                   0112344567889999999999999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.91  E-value=1.9e-25  Score=174.65  Aligned_cols=131  Identities=19%  Similarity=0.236  Sum_probs=84.3

Q ss_pred             ccccc--cccccccccccccCCCcceEEeecCCceeccCCC---------------CCCCcCCcccchHHH---hcCCCC
Q psy16751         29 CWVDK--HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF---------------TEDVQTRQYRSLEVL---INAGYD   88 (214)
Q Consensus        29 ~~~~~--~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~y~aPE~~---~~~~~~   88 (214)
                      +|.+.  ++|+|+||.||+++.++.+||+|||+++......               ....||+.|+|||++   .+..++
T Consensus       152 LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  231 (337)
T 3ll6_A          152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG  231 (337)
T ss_dssp             HHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSS
T ss_pred             HHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCC
Confidence            56667  8999999999999999999999999998764321               134689999999999   455688


Q ss_pred             cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchh
Q psy16751         89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLY  168 (214)
Q Consensus        89 ~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (214)
                      .++||||+||+++++++|..||.....      ..    +.......                                 
T Consensus       232 ~~~Dv~slG~il~el~~g~~p~~~~~~------~~----~~~~~~~~---------------------------------  268 (337)
T 3ll6_A          232 EKQDIWALGCILYLLCFRQHPFEDGAK------LR----IVNGKYSI---------------------------------  268 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCC----------------------CCC---------------------------------
T ss_pred             hHHhHHHHHHHHHHHHhCCCCCcchhH------HH----hhcCcccC---------------------------------
Confidence            999999999999999999999963221      00    00000000                                 


Q ss_pred             hHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        169 SVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                             ......+..+.+|+.+||+.||.+|||+.|++++
T Consensus       269 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          269 -------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             -------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -------CcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                   0011222345799999999999999999999975

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=7.6e-25  Score=171.51  Aligned_cols=133  Identities=10%  Similarity=0.143  Sum_probs=96.6

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|.++++|+|+++.||+++.++.+||+|||+++......      ....+++.|+|||++.+..++.++||||+||++++
T Consensus       163 LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  242 (333)
T 1mqb_A          163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWE  242 (333)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred             HHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHH
Confidence            666778999999999999999999999999998764321      12345778999999998899999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ..+....+... ..+                                        ..+...
T Consensus       243 llt~g~~pf~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~  275 (333)
T 1mqb_A          243 VMTYGERPYWELS------NHEVMKAINDG-FRL----------------------------------------PTPMDC  275 (333)
T ss_dssp             HHTTSCCTTTTCC------HHHHHHHHHTT-CCC----------------------------------------CCCTTC
T ss_pred             HHcCCCCCcccCC------HHHHHHHHHCC-CcC----------------------------------------CCcccC
Confidence            998 999996433      22222222110 000                                        012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+++.+||+.||++|||+.++++
T Consensus       276 ~~~l~~li~~~l~~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          276 PSAIYQLMMQCWQQERARRPKFADIVS  302 (333)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            557789999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.91  E-value=6.9e-25  Score=168.77  Aligned_cols=149  Identities=11%  Similarity=0.096  Sum_probs=100.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|+||.||+++.++.+||+|||+++.....      .....++..|+|||++.+..++.++||||+||++++
T Consensus       130 lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  209 (295)
T 3ugc_A          130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  209 (295)
T ss_dssp             HHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHH
Confidence            66777899999999999999999999999999876432      223356777999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      +++|..++....        ..   ..+..+..+............. ..                   ......+..++
T Consensus       210 l~~g~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~~~~  258 (295)
T 3ugc_A          210 LFTYIEKSKSPP--------AE---FMRMIGNDKQGQMIVFHLIELL-KN-------------------NGRLPRPDGCP  258 (295)
T ss_dssp             HHHTTCTTCSHH--------HH---HHHHHCTTCCTHHHHHHHHHHH-HT-------------------TCCCCCCTTCC
T ss_pred             HHhcccccCCCh--------HH---HHhhhcCccccchhHHHHHHHH-hc-------------------cCcCCCCcCcC
Confidence            999998885311        11   1111121111000000000000 00                   00011234556


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+|+.+||+.||++|||+.|+++
T Consensus       259 ~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          259 DEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            78899999999999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=8.9e-25  Score=171.10  Aligned_cols=135  Identities=16%  Similarity=0.188  Sum_probs=103.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|..+++|+|++|.||+++.++.+||+|||+++.....     .....+++.|+|||++.+..++.++||||+||++++
T Consensus       172 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  251 (334)
T 2pvf_A          172 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  251 (334)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHH
Confidence            366777899999999999999999999999999876532     233466788999999999889999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ..+....+... ..+                                        ..+..+
T Consensus       252 llt~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~~~~  284 (334)
T 2pvf_A          252 IFTLGGSPYPGIP------VEELFKLLKEG-HRM----------------------------------------DKPANC  284 (334)
T ss_dssp             HHTTSCCSSTTCC------HHHHHHHHHHT-CCC----------------------------------------CCCTTC
T ss_pred             HHhCCCCCcCcCC------HHHHHHHHhcC-CCC----------------------------------------CCCccC
Confidence            999 999997433      22222222110 000                                        012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+++.+||+.||.+|||+.|++++
T Consensus       285 ~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          285 TNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            5577899999999999999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.91  E-value=5.2e-25  Score=174.95  Aligned_cols=133  Identities=10%  Similarity=0.124  Sum_probs=91.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC------CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|+||.||+++.++.+||+|||+++......      ....+++.|+|||++.+..++.++||||+||++++
T Consensus       163 LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~e  242 (373)
T 2qol_A          163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE  242 (373)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHH
Confidence            666778999999999999999999999999998764321      11234678999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||...+      ..+....+.....                                         ...+..+
T Consensus       243 llt~g~~P~~~~~------~~~~~~~i~~~~~-----------------------------------------~~~~~~~  275 (373)
T 2qol_A          243 VMSYGERPYWEMS------NQDVIKAVDEGYR-----------------------------------------LPPPMDC  275 (373)
T ss_dssp             HHTTC-CTTTTCC------HHHHHHHHHTTEE-----------------------------------------CCCCTTC
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHcCCC-----------------------------------------CCCCccc
Confidence            997 999997533      2222222111000                                         0012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||+.||++|||+.++++
T Consensus       276 ~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          276 PAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             BHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            567789999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.91  E-value=1.5e-24  Score=164.54  Aligned_cols=158  Identities=16%  Similarity=0.148  Sum_probs=110.5

Q ss_pred             cchhhhhccCc--hhhhhHHHHHH--hhhc--ccccc--cccccccccccccCCCcceEEeecCCceeccCCCCCCCcCC
Q psy16751          3 SIFNFFVAFGS--LEETDKKRRLY--IRNA--CWVDK--HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~--~~~~d~k~~~~--~~~~--~~~~~--~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~   74 (214)
                      +|.+++....+  +....+.....  +..+  +|..+  ++|+|++|.||+++.++.++|+|||.+....  .....||+
T Consensus        95 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--~~~~~~t~  172 (271)
T 3kmu_A           95 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--SPGRMYAP  172 (271)
T ss_dssp             BHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--CTTCBSCG
T ss_pred             cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec--ccCccCCc
Confidence            56666665543  33333332211  2222  55556  8999999999999999999999888875432  23457899


Q ss_pred             cccchHHHhcCCCC---cchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         75 QYRSLEVLINAGYD---CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        75 ~y~aPE~~~~~~~~---~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      .|+|||++.+..++   .++||||+||+++++++|..||...+      .......+... +..+               
T Consensus       173 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~-~~~~---------------  230 (271)
T 3kmu_A          173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS------NMEIGMKVALE-GLRP---------------  230 (271)
T ss_dssp             GGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC------HHHHHHHHHHS-CCCC---------------
T ss_pred             cccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC------hHHHHHHHHhc-CCCC---------------
Confidence            99999999986544   37999999999999999999997543      23322222211 1000               


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                              ..+...+..+.+++.+||+.||++|||++++++
T Consensus       231 ------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          231 ------------------------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             ------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                                    122345567889999999999999999999985

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.91  E-value=3.2e-25  Score=171.08  Aligned_cols=149  Identities=12%  Similarity=0.181  Sum_probs=105.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||++......      .....||..|+|||++.+..++.++||||+||+++
T Consensus       141 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  220 (302)
T 4e5w_A          141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH  220 (302)
T ss_dssp             HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             HhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHH
Confidence            367777899999999999999999999999999877532      33457788899999999988999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..|+..           .........+.............  ....                   ......+...
T Consensus       221 ~l~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~  268 (302)
T 4e5w_A          221 ELLTYCDSDSS-----------PMALFLKMIGPTHGQMTVTRLVN--TLKE-------------------GKRLPCPPNC  268 (302)
T ss_dssp             HHHTTTCGGGS-----------HHHHHHHHHCSCCGGGHHHHHHH--HHHT-------------------TCCCCCCTTC
T ss_pred             HHHHccCCCcc-----------hhhHHhhccCCcccccCHHHHHH--HHhc-------------------cCCCCCCCCC
Confidence            99999887642           11122222222221111000000  0000                   0001123455


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||+.||.+|||+.++++
T Consensus       269 ~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          269 PDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            677899999999999999999999985

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.91  E-value=5.3e-25  Score=180.90  Aligned_cols=134  Identities=13%  Similarity=0.188  Sum_probs=102.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|+|++||+++.++.+||+|||+++.....    .....++..|+|||++.+..++.++||||+||+++++
T Consensus       333 ~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el  412 (495)
T 1opk_A          333 YLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI  412 (495)
T ss_dssp             HHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred             HHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHH
Confidence            366777899999999999999999999999999876432    1223456789999999998899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      ..+....+..   ..                                      ....+..++
T Consensus       413 ~t~g~~p~~~~~------~~~~~~~~~~---~~--------------------------------------~~~~~~~~~  445 (495)
T 1opk_A          413 ATYGMSPYPGID------LSQVYELLEK---DY--------------------------------------RMERPEGCP  445 (495)
T ss_dssp             HTTSCCSSTTCC------GGGHHHHHHT---TC--------------------------------------CCCCCTTCC
T ss_pred             HhCCCCCCCCCC------HHHHHHHHHc---CC--------------------------------------CCCCCCCCC
Confidence            98 889997543      1222211111   00                                      001234455


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+||.+||+.||++|||+.++++
T Consensus       446 ~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          446 EKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            67889999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.91  E-value=1.4e-25  Score=172.07  Aligned_cols=132  Identities=11%  Similarity=0.106  Sum_probs=96.4

Q ss_pred             ccccccccccccccccccCCCcc--------eEEeecCCceeccCCCCCCCcCCcccchHHHhc-CCCCcchhhHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFL--------FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM   99 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~   99 (214)
                      +|...++|+|+||+||+++.++.        +||+|||.+...... ....|++.|+|||++.+ ..++.++||||+||+
T Consensus       129 LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  207 (289)
T 4fvq_A          129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTT  207 (289)
T ss_dssp             HHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHH
T ss_pred             HhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHH
Confidence            66777899999999999988776        999999998655332 22367889999999998 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCCh
Q psy16751        100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP  179 (214)
Q Consensus       100 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (214)
                      ++++++|..++....      ..............                                          .+.
T Consensus       208 l~el~~g~~~~~~~~------~~~~~~~~~~~~~~------------------------------------------~~~  239 (289)
T 4fvq_A          208 LWEICSGGDKPLSAL------DSQRKLQFYEDRHQ------------------------------------------LPA  239 (289)
T ss_dssp             HHHHHTTTCCTTTTS------CHHHHHHHHHTTCC------------------------------------------CCC
T ss_pred             HHHHHcCCCCCcccc------chHHHHHHhhccCC------------------------------------------CCC
Confidence            999999654443221      12222221111000                                          112


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+..+.+|+.+||+.||++|||+.++++|
T Consensus       240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          240 PKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            223345799999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.91  E-value=5.3e-25  Score=168.29  Aligned_cols=132  Identities=14%  Similarity=0.103  Sum_probs=103.2

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||++......  .....|++.|+|||++.+..++.++||||+|++++++++
T Consensus       137 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  216 (284)
T 2a19_B          137 YIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH  216 (284)
T ss_dssp             HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             HHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHh
Confidence            366777899999999999999999999999999876532  344579999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..++..         .........  ..                                         ..+...+..+
T Consensus       217 ~~~~~~~---------~~~~~~~~~--~~-----------------------------------------~~~~~~~~~~  244 (284)
T 2a19_B          217 VCDTAFE---------TSKFFTDLR--DG-----------------------------------------IISDIFDKKE  244 (284)
T ss_dssp             CCSSHHH---------HHHHHHHHH--TT-----------------------------------------CCCTTSCHHH
T ss_pred             cCCcchh---------HHHHHHHhh--cc-----------------------------------------cccccCCHHH
Confidence            9877641         111111000  00                                         0112334567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      .+|+.+||+.||.+|||+.|++++.+
T Consensus       245 ~~li~~~l~~dp~~Rps~~e~l~~l~  270 (284)
T 2a19_B          245 KTLLQKLLSKKPEDRPNTSEILRTLT  270 (284)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHH
Confidence            89999999999999999999998754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=4e-25  Score=172.88  Aligned_cols=135  Identities=13%  Similarity=0.152  Sum_probs=103.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.++++|+|++|.||+++.++.+||+|||+++.....     .....+|+.|+|||++.+..++.++||||+||+++++
T Consensus       180 lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  259 (333)
T 2i1m_A          180 LASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI  259 (333)
T ss_dssp             HHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHH
Confidence            66777899999999999999999999999999866432     2234567789999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+..      ....+..+......+                                        ..+...+
T Consensus       260 ~t~g~~p~~~~~------~~~~~~~~~~~~~~~----------------------------------------~~~~~~~  293 (333)
T 2i1m_A          260 FSLGLNPYPGIL------VNSKFYKLVKDGYQM----------------------------------------AQPAFAP  293 (333)
T ss_dssp             TTTSCCSSTTCC------SSHHHHHHHHHTCCC----------------------------------------CCCTTCC
T ss_pred             HcCCCCCCcccc------hhHHHHHHHhcCCCC----------------------------------------CCCCCCC
Confidence            98 888987543      122222222211000                                        0122334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+|+.+||+.||.+|||+.+++++
T Consensus       294 ~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          294 KNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            567899999999999999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.91  E-value=4e-25  Score=172.04  Aligned_cols=135  Identities=19%  Similarity=0.312  Sum_probs=103.7

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++.....     .....+++.|+|||++.+..++.++||||+||++++
T Consensus       153 ~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  232 (322)
T 1p4o_A          153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE  232 (322)
T ss_dssp             HHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHH
Confidence            366777899999999999999999999999999866432     233467888999999999899999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      .......+..  +..+                                       ..+...
T Consensus       233 l~~~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~  265 (322)
T 1p4o_A          233 IATLAEQPYQGLS------NEQVLRFVME--GGLL---------------------------------------DKPDNC  265 (322)
T ss_dssp             HHHTSCCTTTTSC------HHHHHHHHHT--TCCC---------------------------------------CCCTTC
T ss_pred             HHhcCCCccccCC------HHHHHHHHHc--CCcC---------------------------------------CCCCCC
Confidence            999 888886433      2222222111  0000                                       012334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||+.||.+|||+.|++++
T Consensus       266 ~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          266 PDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            5577899999999999999999999975

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.91  E-value=3.3e-25  Score=173.85  Aligned_cols=135  Identities=14%  Similarity=0.165  Sum_probs=102.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||+++....     ......+|+.|+|||++.+..++.++||||+||++++
T Consensus       189 ~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  268 (343)
T 1luf_A          189 YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE  268 (343)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHH
Confidence            36677789999999999999999999999999976532     2234477889999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++ |..||.+.+      ..+....+..  +..+                                       ..+..+
T Consensus       269 l~t~g~~p~~~~~------~~~~~~~~~~--~~~~---------------------------------------~~~~~~  301 (343)
T 1luf_A          269 IFSYGLQPYYGMA------HEEVIYYVRD--GNIL---------------------------------------ACPENC  301 (343)
T ss_dssp             HHTTTCCTTTTSC------HHHHHHHHHT--TCCC---------------------------------------CCCTTC
T ss_pred             HHhcCCCcCCCCC------hHHHHHHHhC--CCcC---------------------------------------CCCCCC
Confidence            998 999997533      2222222211  1000                                       012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||+.||++|||+.+++++
T Consensus       302 ~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          302 PLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            5577899999999999999999998753

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.91  E-value=6.2e-25  Score=168.36  Aligned_cols=134  Identities=13%  Similarity=0.151  Sum_probs=102.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|++|.||+++.++.++|+|||.+.......    ....+++.|+|||++.+..++.++||||+|++++++
T Consensus       126 ~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  205 (288)
T 3kfa_A          126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI  205 (288)
T ss_dssp             HHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHH
Confidence            3666778999999999999999999999999998665332    223567789999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||...+      .......+... ..                                        ...+...+
T Consensus       206 l~~g~~p~~~~~------~~~~~~~~~~~-~~----------------------------------------~~~~~~~~  238 (288)
T 3kfa_A          206 ATYGMSPYPGID------LSQVYELLEKD-YR----------------------------------------MERPEGCP  238 (288)
T ss_dssp             HTTSCCSSTTCC------GGGHHHHHHTT-CC----------------------------------------CCCCTTCC
T ss_pred             HhCCCCCCCCCC------HHHHHHHHhcc-CC----------------------------------------CCCCCCCC
Confidence            99 888986533      11111111110 00                                        01123445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+|+.+||..||.+|||++++++
T Consensus       239 ~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          239 EKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            67889999999999999999999875

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.91  E-value=7e-25  Score=169.58  Aligned_cols=147  Identities=18%  Similarity=0.155  Sum_probs=104.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.++++|+|++|.||+++.++.+||+|||++......     .....|++.|+|||.+.+ .++.++||||+|++++++
T Consensus       149 lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l  227 (307)
T 2nru_A          149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI  227 (307)
T ss_dssp             HHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHH
T ss_pred             HhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHH
Confidence            66777899999999999999999999999999876532     234578999999998865 478899999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..||.......   ....+.   +........+.       .+...        .            ....+...+.
T Consensus       228 ~~g~~p~~~~~~~~---~~~~~~---~~~~~~~~~~~-------~~~~~--------~------------~~~~~~~~~~  274 (307)
T 2nru_A          228 ITGLPAVDEHREPQ---LLLDIK---EEIEDEEKTIE-------DYIDK--------K------------MNDADSTSVE  274 (307)
T ss_dssp             HHCCCSBCTTBSSS---BTTHHH---HHHHTTSCCHH-------HHSCS--------S------------CSCCCHHHHH
T ss_pred             HHCCCCcccCcchH---HHHHHH---HHhhhhhhhhh-------hhccc--------c------------ccccchHHHH
Confidence            99999997543211   111111   11100000000       00000        0            0012355667


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+++.+||+.||.+|||+++++++
T Consensus       275 ~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          275 AMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            88999999999999999999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.91  E-value=6.8e-25  Score=178.43  Aligned_cols=133  Identities=13%  Similarity=0.203  Sum_probs=99.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|++++||+++.++.+||+|||+++.....    .....++..|+|||++.+..++.++||||+||++++++
T Consensus       296 LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~  375 (452)
T 1fmk_A          296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT  375 (452)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHH
Confidence            66777899999999999999999999999999876432    12234667899999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+..      ..+.+..+.+  +.                                       ....+..++.
T Consensus       376 t~g~~P~~~~~------~~~~~~~i~~--~~---------------------------------------~~~~~~~~~~  408 (452)
T 1fmk_A          376 TKGRVPYPGMV------NREVLDQVER--GY---------------------------------------RMPCPPECPE  408 (452)
T ss_dssp             TTTCCSSTTCC------HHHHHHHHHT--TC---------------------------------------CCCCCTTSCH
T ss_pred             hCCCCCCCCCC------HHHHHHHHHc--CC---------------------------------------CCCCCCCCCH
Confidence            9 899997543      2333322211  00                                       0011234556


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+||.+||+.||++|||++++++
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            7889999999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.91  E-value=1.6e-24  Score=183.27  Aligned_cols=133  Identities=13%  Similarity=0.224  Sum_probs=102.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+++.....    .....+++.|+|||++.+..++.++||||+||++++++
T Consensus       507 LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  586 (656)
T 2j0j_A          507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL  586 (656)
T ss_dssp             HHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence            66777899999999999999999999999999876432    12335677899999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+      ..+.+..+...  ..                                       ...+..++.
T Consensus       587 t~g~~Pf~~~~------~~~~~~~i~~~--~~---------------------------------------~~~~~~~~~  619 (656)
T 2j0j_A          587 MHGVKPFQGVK------NNDVIGRIENG--ER---------------------------------------LPMPPNCPP  619 (656)
T ss_dssp             TTSCCTTTTCC------HHHHHHHHHHT--CC---------------------------------------CCCCTTCCH
T ss_pred             HcCCCCCCCCC------HHHHHHHHHcC--CC---------------------------------------CCCCccccH
Confidence            7 889997543      33333333221  00                                       012234556


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+||.+||..||++|||+.++++
T Consensus       620 ~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          620 TLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHH
Confidence            7889999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.91  E-value=1.6e-24  Score=167.77  Aligned_cols=136  Identities=18%  Similarity=0.230  Sum_probs=93.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      +|..+++|+|+++.||+++.++.+||+|||++......   .....|++.|+|||++.+..++.++||||+|++++++++
T Consensus       152 LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~  231 (310)
T 2wqm_A          152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA  231 (310)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHh
Confidence            66777899999999999999999999999999866432   234578999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |..||.+...     ....+.........++                                       ......+..+
T Consensus       232 g~~p~~~~~~-----~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~l  267 (310)
T 2wqm_A          232 LQSPFYGDKM-----NLYSLCKKIEQCDYPP---------------------------------------LPSDHYSEEL  267 (310)
T ss_dssp             SSCTTC---C-----CHHHHHHHHHTTCSCC---------------------------------------CCTTTSCHHH
T ss_pred             CCCCCcccch-----hHHHHHHHhhcccCCC---------------------------------------CcccccCHHH
Confidence            9999974321     2222222211100000                                       0012344567


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+|+.+||..||++|||+.++++
T Consensus       268 ~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          268 RQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHH
Confidence            89999999999999999999886

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.91  E-value=2e-24  Score=164.89  Aligned_cols=134  Identities=10%  Similarity=0.108  Sum_probs=102.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||.+......    .....+++.|+|||.+.+..++.++||||+|++++++
T Consensus       124 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  203 (279)
T 1qpc_A          124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI  203 (279)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred             HHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHH
Confidence            367777899999999999999999999999999877532    2233567789999999988899999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |..||.+.+      ..+.+..+.+.  ..                                       ...+...+
T Consensus       204 ~~~g~~p~~~~~------~~~~~~~~~~~--~~---------------------------------------~~~~~~~~  236 (279)
T 1qpc_A          204 VTHGRIPYPGMT------NPEVIQNLERG--YR---------------------------------------MVRPDNCP  236 (279)
T ss_dssp             HTTTCCSSTTCC------HHHHHHHHHTT--CC---------------------------------------CCCCTTCC
T ss_pred             HhCCCCCCcccC------HHHHHHHHhcc--cC---------------------------------------CCCccccc
Confidence            99 888987533      22222222110  00                                       00123345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      ..+.+++.+||..||++|||++++++
T Consensus       237 ~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          237 EELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHH
Confidence            57789999999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1.4e-24  Score=168.32  Aligned_cols=161  Identities=17%  Similarity=0.179  Sum_probs=103.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~   74 (214)
                      +|.+++.....+....+.....  +.  ..+|..+++|+|+++.||+++.++.+||+|||++......    .....|++
T Consensus       120 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  199 (309)
T 2h34_A          120 DLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTL  199 (309)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCG
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCc
Confidence            4555555544444444432211  12  2366677899999999999999999999999999766432    23457899


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||++.+..++.++||||+|++++++++|..||...+       ...+.....  ...+..                
T Consensus       200 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~--~~~~~~----------------  254 (309)
T 2h34_A          200 YYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-------LSVMGAHIN--QAIPRP----------------  254 (309)
T ss_dssp             GGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-------HHHHHHHHH--SCCCCG----------------
T ss_pred             CccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHhc--cCCCCc----------------
Confidence            9999999998889999999999999999999999997422       222222211  111000                


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-CHHHHhc
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-TAADCLQ  208 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-t~~e~l~  208 (214)
                                          ...+...+..+.+++.+||+.||++|| |++++++
T Consensus       255 --------------------~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          255 --------------------STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             --------------------GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             --------------------cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                                001233455778999999999999999 8888764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.91  E-value=3.1e-25  Score=173.14  Aligned_cols=137  Identities=12%  Similarity=0.147  Sum_probs=103.0

Q ss_pred             cccccccccccccccccccCC---CcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACM   99 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~   99 (214)
                      .+|..+++|+|++|.||+++.   +..+||+|||++......     .....|++.|+|||++.+..++.++||||+||+
T Consensus       155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  234 (327)
T 2yfx_A          155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  234 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHH
Confidence            366777899999999999984   456999999999755322     233467889999999999999999999999999


Q ss_pred             HHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCC
Q psy16751        100 AFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT  178 (214)
Q Consensus       100 l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (214)
                      ++++++ |..||...+      ..+....+... ..+                                        ..+
T Consensus       235 l~ellt~g~~p~~~~~------~~~~~~~~~~~-~~~----------------------------------------~~~  267 (327)
T 2yfx_A          235 LWEIFSLGYMPYPSKS------NQEVLEFVTSG-GRM----------------------------------------DPP  267 (327)
T ss_dssp             HHHHHTTSCCSSTTCC------HHHHHHHHHTT-CCC----------------------------------------CCC
T ss_pred             HHHHHcCCCCCCCCcC------HHHHHHHHhcC-CCC----------------------------------------CCC
Confidence            999998 888986433      22222222110 000                                        012


Q ss_pred             hhhHHHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy16751        179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPW  211 (214)
Q Consensus       179 ~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~  211 (214)
                      ..++..+.+++.+||+.||.+|||+.+++++.|
T Consensus       268 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~  300 (327)
T 2yfx_A          268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE  300 (327)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            334557789999999999999999999998765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.91  E-value=4.3e-25  Score=172.36  Aligned_cols=147  Identities=14%  Similarity=0.130  Sum_probs=103.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|+||.||+++.++.+||+|||+++.....      .....|++.|+|||++.+..++.++||||+||++++
T Consensus       143 lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  222 (327)
T 3lxl_A          143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE  222 (327)
T ss_dssp             HHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             HHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHH
Confidence            66777899999999999999999999999999876432      233467888999999999889999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh--HHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      +++|..||....        .............+.  ........                          ......+..
T Consensus       223 ll~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~  268 (327)
T 3lxl_A          223 LFTYCDKSCSPS--------AEFLRMMGCERDVPALSRLLELLEE--------------------------GQRLPAPPA  268 (327)
T ss_dssp             HHTTTCGGGSHH--------HHHHHHCC----CCHHHHHHHHHHT--------------------------TCCCCCCTT
T ss_pred             HHhCCCCCcccc--------chhhhhcccccccccHHHHHHHhhc--------------------------ccCCCCCCc
Confidence            999999986321        111000000000000  00000000                          000112345


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ++..+.+|+.+||+.||++|||+++++++
T Consensus       269 ~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          269 CPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            56778999999999999999999999753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.90  E-value=1.4e-24  Score=170.30  Aligned_cols=143  Identities=16%  Similarity=0.118  Sum_probs=99.5

Q ss_pred             ccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCC------CCcchhhHHHH
Q psy16751         31 VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAG------YDCSADIWSVA   97 (214)
Q Consensus        31 ~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~------~~~~~Diws~G   97 (214)
                      ..+++|+|+||.||+++.++.+||+|||++......       .....||+.|+|||++.+..      ++.++||||+|
T Consensus       165 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG  244 (342)
T 1b6c_B          165 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  244 (342)
T ss_dssp             BCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHH
Confidence            557799999999999999999999999999876532       24458999999999998762      33689999999


Q ss_pred             HHHHHHhhC----------CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCch
Q psy16751         98 CMAFELATG----------DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL  167 (214)
Q Consensus        98 ~~l~~l~~g----------~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (214)
                      |+++++++|          ..||.......  .....+...... +...                       +.. +.. 
T Consensus       245 ~il~el~tg~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~-~~~~-----------------------~~~-~~~-  296 (342)
T 1b6c_B          245 LVFWEIARRCSIGGIHEDYQLPYYDLVPSD--PSVEEMRKVVCE-QKLR-----------------------PNI-PNR-  296 (342)
T ss_dssp             HHHHHHHTTBCBTTBCCCCCCTTTTTSCSS--CCHHHHHHHHTT-SCCC-----------------------CCC-CGG-
T ss_pred             HHHHHHHhccCcCCcccccccCccccCcCc--ccHHHHHHHHHH-HHhC-----------------------CCC-ccc-
Confidence            999999999          56665322100  012222211100 0000                       000 000 


Q ss_pred             hhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                              .....+...+.+|+.+||+.||++|||+.++++|
T Consensus       297 --------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          297 --------WQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             --------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             --------ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                    0113456678999999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.90  E-value=3.4e-24  Score=177.60  Aligned_cols=133  Identities=13%  Similarity=0.203  Sum_probs=103.2

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|++++||+++.++.+||+|||+++.....    .....++..|+|||++.+..++.++||||+||++++|+
T Consensus       379 LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~  458 (535)
T 2h8h_A          379 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT  458 (535)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred             HHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence            66777899999999999999999999999999866431    22335677899999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+..      ..+.+..+.+  +.                                       ....+..++.
T Consensus       459 t~g~~P~~~~~------~~~~~~~i~~--~~---------------------------------------~~~~~~~~~~  491 (535)
T 2h8h_A          459 TKGRVPYPGMV------NREVLDQVER--GY---------------------------------------RMPCPPECPE  491 (535)
T ss_dssp             TTTCCSSTTCC------HHHHHHHHHT--TC---------------------------------------CCCCCTTCCH
T ss_pred             hCCCCCCCCCC------HHHHHHHHHc--CC---------------------------------------CCCCCCCCCH
Confidence            9 889997543      2333322211  00                                       0011234556


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .+.+||.+||+.||++|||++++++
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHH
Confidence            7889999999999999999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.90  E-value=5.6e-24  Score=165.28  Aligned_cols=134  Identities=12%  Similarity=0.116  Sum_probs=95.4

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc--------CCCCCCCcCCcccchHHHhc---------CCCCcc
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD--------KHFTEDVQTRQYRSLEVLIN---------AGYDCS   90 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~--------~~~~~~~~~~~y~aPE~~~~---------~~~~~~   90 (214)
                      .+|.++++|+|++|.||+++ ++.+||+|||+++...        .......|++.|+|||++.+         ..++.+
T Consensus       145 ~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~  223 (319)
T 2y4i_B          145 YLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH  223 (319)
T ss_dssp             HHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH
T ss_pred             HHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCch
Confidence            36677789999999999998 7899999999987553        12233468899999999985         347889


Q ss_pred             hhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhH
Q psy16751         91 ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV  170 (214)
Q Consensus        91 ~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (214)
                      +||||+||+++++++|..||....      .......+..  +..+.                        .        
T Consensus       224 ~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~--~~~~~------------------------~--------  263 (319)
T 2y4i_B          224 SDVFALGTIWYELHAREWPFKTQP------AEAIIWQMGT--GMKPN------------------------L--------  263 (319)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSSSCC------HHHHHHHHHT--TCCCC------------------------C--------
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHhcc--CCCCC------------------------C--------
Confidence            999999999999999999997533      2222222211  00000                        0        


Q ss_pred             HHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       171 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                            .....+..+.+++.+||..||.+|||+.++++
T Consensus       264 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 ------SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                  01122345679999999999999999999885

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.90  E-value=8.4e-24  Score=165.02  Aligned_cols=148  Identities=12%  Similarity=0.130  Sum_probs=102.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|..+++|+|++|.||+++.++.+||+|||++......      .....++..|+|||.+.+..++.++||||+||++++
T Consensus       161 LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  240 (326)
T 2w1i_A          161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  240 (326)
T ss_dssp             HHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             HHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHH
Confidence            66777899999999999999999999999999877532      223456778999999999889999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh-HHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPK-RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      +++|..+|...        ..   ...+..+.... ......  ........                   .....+..+
T Consensus       241 l~tg~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------------~~~~~~~~~  288 (326)
T 2w1i_A          241 LFTYIEKSKSP--------PA---EFMRMIGNDKQGQMIVFH--LIELLKNN-------------------GRLPRPDGC  288 (326)
T ss_dssp             HHHTTCGGGSH--------HH---HHHHHHCTTCCTHHHHHH--HHHHHHTT-------------------CCCCCCTTC
T ss_pred             HHhcCCCCCCC--------HH---HHHHhhccccchhhhHHH--HHHHhhcC-------------------CCCCCCCcc
Confidence            99999887521        11   11111121111 000000  00000000                   000123445


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||+.||++|||+.++++
T Consensus       289 ~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          289 PDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            567889999999999999999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.90  E-value=3e-24  Score=165.62  Aligned_cols=153  Identities=17%  Similarity=0.261  Sum_probs=99.3

Q ss_pred             cchhhhhccC--chhhhhHHHHHH--h--hhcccccccccccccccccccCC---CcceEEeecCCceeccCCCCCCCcC
Q psy16751          3 SIFNFFVAFG--SLEETDKKRRLY--I--RNACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKHFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~--~~~~~d~k~~~~--~--~~~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~   73 (214)
                      +|.+++....  .+....+.....  +  -..+|..+++|+|++|.||+++.   ++.+||+|||++....         
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------  171 (299)
T 3m2w_A          101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------  171 (299)
T ss_dssp             BHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---------
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---------
Confidence            4556665543  344444432211  1  12367777899999999999988   7899999999986543         


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                                +..++.++||||+||+++++++|..||.......             .......    . ...       
T Consensus       172 ----------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-------------~~~~~~~----~-~~~-------  216 (299)
T 3m2w_A          172 ----------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------------ISPGMKT----R-IRM-------  216 (299)
T ss_dssp             ----------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCC----S-SCT-------
T ss_pred             ----------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-------------hhHHHHH----H-Hhh-------
Confidence                      2347789999999999999999999997533100             0000000    0 000       


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                               ........      .....+.++.+|+.+||+.||++|||++|+|+||||++
T Consensus       217 ---------~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          217 ---------GQYEFPNP------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             ---------TCCSSCHH------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             ---------ccccCCch------hcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence                     00000000      00234567889999999999999999999999999853

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.90  E-value=3e-24  Score=170.04  Aligned_cols=84  Identities=14%  Similarity=0.192  Sum_probs=74.5

Q ss_pred             ccccccccccccccccccCC-----------CcceEEeecCCceecc-----CCCCCCCcCCcccchHHHhcCCCCcchh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLP-----------PFLFDIGTYRNACWVD-----KHFTEDVQTRQYRSLEVLINAGYDCSAD   92 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~-----------~~~~kl~Dfg~a~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~D   92 (214)
                      +|..+++|+|+||+||+++.           ++.+||+|||+|+...     ......+||+.|+|||++.+..|+.++|
T Consensus       188 lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  267 (365)
T 3e7e_A          188 VHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQID  267 (365)
T ss_dssp             HHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred             HhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcccc
Confidence            66677899999999999988           8999999999997653     2234568999999999999999999999


Q ss_pred             hHHHHHHHHHHhhCCCCCCC
Q psy16751         93 IWSVACMAFELATGDYLFEP  112 (214)
Q Consensus        93 iws~G~~l~~l~~g~~~f~~  112 (214)
                      |||+||++++|++|..||..
T Consensus       268 iwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          268 YFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             HHHHHHHHHHHHHSSCCCEE
T ss_pred             HHHHHHHHHHHHhCCCcccc
Confidence            99999999999999999863

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.89  E-value=2.9e-24  Score=167.10  Aligned_cols=149  Identities=15%  Similarity=0.169  Sum_probs=102.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|..+++|+|+++.||+++.++.+||+|||++......      .....+++.|+|||++.+..++.++||||+||+++
T Consensus       149 ~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  228 (318)
T 3lxp_A          149 YLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY  228 (318)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             HHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHH
Confidence            366677899999999999999999999999999877532      23346788899999999988999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|..||....        ..   .....+..........  .......                   ......+..+
T Consensus       229 ~ll~g~~p~~~~~--------~~---~~~~~~~~~~~~~~~~--~~~~~~~-------------------~~~~~~~~~~  276 (318)
T 3lxp_A          229 ELLTHCDSSQSPP--------TK---FLELIGIAQGQMTVLR--LTELLER-------------------GERLPRPDKC  276 (318)
T ss_dssp             HHHTTTCGGGSHH--------HH---HHHHHCSCCHHHHHHH--HHHHHHT-------------------TCCCCCCTTC
T ss_pred             HHHhCCCcccccc--------hh---hhhhhcccccchhHHH--HHHHHhc-------------------ccCCCCCccc
Confidence            9999999985311        10   1111111110000000  0000000                   0001123445


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||+.||++|||+.|+++
T Consensus       277 ~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          277 PAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            667899999999999999999999885

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.89  E-value=6.7e-24  Score=166.24  Aligned_cols=137  Identities=15%  Similarity=0.040  Sum_probs=97.4

Q ss_pred             cc-ccccccccccccccccCCCc--------------------ceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCC
Q psy16751         29 CW-VDKHFTEDVQTRQYRSLPPF--------------------LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGY   87 (214)
Q Consensus        29 ~~-~~~~~h~d~k~~nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~   87 (214)
                      +| ..+++|||+||+||++..++                    .+||+|||+|+.....  ..+||+.|+|||++.+.. 
T Consensus       177 lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~g~~-  253 (336)
T 2vuw_A          177 AEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFTGDG-  253 (336)
T ss_dssp             HHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGCCCS-
T ss_pred             HHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhcCCC-
Confidence            55 66789999999999998876                    9999999999877543  348999999999998776 


Q ss_pred             CcchhhHHHHHH-HHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCc
Q psy16751         88 DCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD  166 (214)
Q Consensus        88 ~~~~Diws~G~~-l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (214)
                      +.++||||+|++ ..+++.|..||..         ..........+       ......              .......
T Consensus       254 ~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~-------~~~~~~--------------~~~~~~~  303 (336)
T 2vuw_A          254 DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKM-------LKQMTF--------------KTKCNTP  303 (336)
T ss_dssp             SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHH-------HHTCCC--------------SSCCCSH
T ss_pred             ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhh-------hhhhcc--------------Ccccchh
Confidence            889999998777 6678888888841         11111111100       000000              0000000


Q ss_pred             hhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHh-cCCCCC
Q psy16751        167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCL-QHPWLQ  213 (214)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l-~hp~f~  213 (214)
                                .....+.++.+||.+||++|     ||+|+| +||||+
T Consensus       304 ----------~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          304 ----------AMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ----------HHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ----------hhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                      11356778999999999987     999999 999996

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.88  E-value=2.6e-23  Score=161.49  Aligned_cols=137  Identities=16%  Similarity=0.209  Sum_probs=98.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCC------------CCCCcCCcccchHHHhcCC---CCcchh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF------------TEDVQTRQYRSLEVLINAG---YDCSAD   92 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~------------~~~~~~~~y~aPE~~~~~~---~~~~~D   92 (214)
                      .+|.++++|+|++|.||+++.++.+||+|||.+.......            ....||+.|+|||++.+..   ++.++|
T Consensus       149 ~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~D  228 (317)
T 2buj_A          149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD  228 (317)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHH
T ss_pred             HHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhh
Confidence            3667778999999999999999999999999987653211            1235789999999998654   688999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHH
Q psy16751         93 IWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV  172 (214)
Q Consensus        93 iws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (214)
                      |||+||+++++++|..||.......     ..+.....  ...                                     
T Consensus       229 i~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~--~~~-------------------------------------  264 (317)
T 2buj_A          229 VWSLGCVLYAMMFGEGPYDMVFQKG-----DSVALAVQ--NQL-------------------------------------  264 (317)
T ss_dssp             HHHHHHHHHHHHHSSCTTHHHHHTT-----SCHHHHHH--CC--------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCChhhhhccc-----chhhHHhh--ccC-------------------------------------
Confidence            9999999999999999984210000     00000000  000                                     


Q ss_pred             hhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       173 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                       ........+..+.+|+.+||+.||.+|||+++++++
T Consensus       265 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          265 -SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence             000112345577899999999999999999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.4e-22  Score=172.31  Aligned_cols=128  Identities=13%  Similarity=0.103  Sum_probs=99.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      .+|.++++|+|+||.||+++.+ .+||+|||+++..... ...+||+.|+|||++.+. ++.++||||+||+++++++|.
T Consensus       197 ~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~  273 (681)
T 2pzi_A          197 YLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDL  273 (681)
T ss_dssp             HHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC-CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCC
Confidence            3677788999999999999874 8999999999877654 556899999999999775 488999999999999999998


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      ++|.+.....                 .+.                          . .          .....+..+.+
T Consensus       274 ~~~~~~~~~~-----------------~~~--------------------------~-~----------~~~~~~~~l~~  299 (681)
T 2pzi_A          274 PTRNGRYVDG-----------------LPE--------------------------D-D----------PVLKTYDSYGR  299 (681)
T ss_dssp             CEETTEECSS-----------------CCT--------------------------T-C----------HHHHHCHHHHH
T ss_pred             CCCccccccc-----------------ccc--------------------------c-c----------cccccCHHHHH
Confidence            8875321000                 000                          0 0          00112346789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      ||.+||+.||++||+..+++.|+|+
T Consensus       300 li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          300 LLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHhhhccCChhhCCCHHHHHHHHHH
Confidence            9999999999999998888877664

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.69  E-value=1.1e-18  Score=133.78  Aligned_cols=115  Identities=10%  Similarity=0.018  Sum_probs=80.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCC
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      .+|.++++|+|+||+||+++.++.+||+++|.                 ++       +++.++||||+||+++++++|.
T Consensus       144 ~lH~~givH~Dikp~NIll~~~g~~kl~~~~~-----------------~~-------~~~~~~Di~slG~il~elltg~  199 (286)
T 3uqc_A          144 AAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT-----------------MP-------DANPQDDIRGIGASLYALLVNR  199 (286)
T ss_dssp             HHHHTTCCCCCCSGGGEEEETTSCEEECSCCC-----------------CT-------TCCHHHHHHHHHHHHHHHHHSE
T ss_pred             HHHHCCCccCCCCcccEEEcCCCCEEEEeccc-----------------cC-------CCCchhHHHHHHHHHHHHHHCC
Confidence            36777889999999999999999999985543                 22       4789999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      .||.+.+.......                  .....        ..        ..... .      ......+..+.+
T Consensus       200 ~Pf~~~~~~~~~~~------------------~~~~~--------~~--------~~~~~-~------~~~~~~~~~l~~  238 (286)
T 3uqc_A          200 WPLPEAGVRSGLAP------------------AERDT--------AG--------QPIEP-A------DIDRDIPFQISA  238 (286)
T ss_dssp             ECSCCCSBCCCSEE------------------CCBCT--------TS--------CBCCH-H------HHCTTSCHHHHH
T ss_pred             CCCCcCCcchhhHH------------------HHHHh--------cc--------CCCCh-h------hcccCCCHHHHH
Confidence            99975432110000                  00000        00        00000 0      012345567889


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q psy16751        188 FLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      |+.+||+.||++| |+.|+++
T Consensus       239 li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          239 VAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHcccCCccC-CHHHHHH
Confidence            9999999999999 9999875

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.65  E-value=1.6e-18  Score=144.38  Aligned_cols=103  Identities=12%  Similarity=-0.014  Sum_probs=64.1

Q ss_pred             cchhhhhccCchhhhhHHHHHHhh--hcccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~   77 (214)
                      +|++++...+.+....+-. ..+.  ..+|.++++|||+||+||+++.+|.+||+|||+|+.....   ....+||+.|+
T Consensus       328 ~L~d~i~~~~~l~~~~I~~-QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~Ym  406 (569)
T 4azs_A          328 LLSDMLAAGEEIDREKILG-SLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVF  406 (569)
T ss_dssp             EHHHHHHTTCCCCHHHHHH-HHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHH
T ss_pred             cHHHHHHhCCCCCHHHHHH-HHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhc
Confidence            6777777766664443311 1122  2478888899999999999999999999999999877543   34458999999


Q ss_pred             chHHHhcCCCCcchhhHHHHHHHHHHhhCC
Q psy16751         78 SLEVLINAGYDCSADIWSVACMAFELATGD  107 (214)
Q Consensus        78 aPE~~~~~~~~~~~Diws~G~~l~~l~~g~  107 (214)
                      |||++.+. +..++|+||+|++++++..+.
T Consensus       407 APE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          407 VNELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             HHHHC------------------CCCCTTH
T ss_pred             cHHHhCCC-CCCcccccccccchhhhcccc
Confidence            99999764 567899999999988776654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.22  E-value=1e-12  Score=108.96  Aligned_cols=102  Identities=9%  Similarity=-0.012  Sum_probs=75.5

Q ss_pred             cchhhhhccCchhhhhHHHHHHhhhcccccccccccccccccccCCCcceEEeecCCceeccCC----------CCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----------FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----------~~~~~~   72 (214)
                      +|.+++.....+...-+...    ..+|.+.++|+|+||+||+++.  .+||+|||+|+.....          ....+|
T Consensus       425 sL~~~l~~~~~i~~qi~~aL----~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~G  498 (540)
T 3en9_A          425 LAKDVIEDNLDIAYKIGEIV----GKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLS  498 (540)
T ss_dssp             EHHHHSTTCTHHHHHHHHHH----HHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH----HHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcC
Confidence            34555554333444444442    2356677899999999999998  9999999999987542          134589


Q ss_pred             CCcccchHHHhc--CCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         73 TRQYRSLEVLIN--AGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        73 ~~~y~aPE~~~~--~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      |+.|+|||++.+  .+|+..+|+||..+-..+-..++..+
T Consensus       499 T~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          499 THHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            999999999997  57888999999998888776655443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.51  E-value=1.4e-08  Score=77.32  Aligned_cols=45  Identities=9%  Similarity=-0.072  Sum_probs=38.3

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhc
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN   84 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~   84 (214)
                      +|..+++|+|+||.||+++ ++.+||+|||+|+          .+..++|||.+.+
T Consensus       209 lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~----------~~~~~~a~e~l~r  253 (282)
T 1zar_A          209 FYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV----------EVGEEGWREILER  253 (282)
T ss_dssp             HHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE----------ETTSTTHHHHHHH
T ss_pred             HHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe----------ECCCCCHHHHHHH
Confidence            5677789999999999999 9999999999985          3445789998864

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.63  E-value=1.6e-05  Score=59.47  Aligned_cols=33  Identities=6%  Similarity=-0.051  Sum_probs=29.0

Q ss_pred             cc-ccccccccccccccccCCCcceEEeecCCceec
Q psy16751         29 CW-VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV   63 (214)
Q Consensus        29 ~~-~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~   63 (214)
                      +| ...++|+|+||.||++..  .++|+|||+|...
T Consensus       186 lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          186 LYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            55 667899999999999987  8999999999654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.87  E-value=0.0013  Score=50.10  Aligned_cols=76  Identities=12%  Similarity=0.129  Sum_probs=47.9

Q ss_pred             cccccccccccccCC--CcceEEeecCCceeccCCCCCCCcCCcc---cchHHHhcC--CC------------CcchhhH
Q psy16751         34 HFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKHFTEDVQTRQY---RSLEVLINA--GY------------DCSADIW   94 (214)
Q Consensus        34 ~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~y---~aPE~~~~~--~~------------~~~~Diw   94 (214)
                      .+|+|+.+.|++++.  ...+.|+||+.+...+. ..........   ..|+.....  .|            ..-.+.|
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~  271 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP-DNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYW  271 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECT-THHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh-HHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence            479999999999987  56789999999875432 1111111111   222222110  11            1226899


Q ss_pred             HHHHHHHHHhhCCCCC
Q psy16751         95 SVACMAFELATGDYLF  110 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f  110 (214)
                      ++|.+++.+.+|..+|
T Consensus       272 ~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          272 SFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHcCCHHH
Confidence            9999999999997665

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=95.86  E-value=0.0016  Score=51.62  Aligned_cols=36  Identities=8%  Similarity=-0.215  Sum_probs=29.8

Q ss_pred             ccccccccccccccccccCCCc----------ceEEeecCCceecc
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPF----------LFDIGTYRNACWVD   64 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~----------~~kl~Dfg~a~~~~   64 (214)
                      +|.+.++|+|+||.||++..++          .+.||||+.+-...
T Consensus       221 lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          221 LAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             HHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             HHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence            5667789999999999998776          38999999886543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=93.49  E-value=0.022  Score=41.82  Aligned_cols=28  Identities=4%  Similarity=-0.293  Sum_probs=24.5

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|+|+++.||+++.++.+.|+||+.+.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            5899999999999877777899999874

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=89.74  E-value=0.093  Score=38.64  Aligned_cols=28  Identities=4%  Similarity=-0.194  Sum_probs=23.9

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|+|+++.|++++..+.+.|+||+.+.
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence            4799999999999876667899999873

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=88.78  E-value=0.18  Score=39.10  Aligned_cols=31  Identities=6%  Similarity=-0.010  Sum_probs=25.4

Q ss_pred             ccccccccccccccCCCc--ceEEeecCCceec
Q psy16751         33 KHFTEDVQTRQYRSLPPF--LFDIGTYRNACWV   63 (214)
Q Consensus        33 ~~~h~d~k~~nil~~~~~--~~kl~Dfg~a~~~   63 (214)
                      ..+|+|+++.|+++..++  .+.|+||+.+..-
T Consensus       217 ~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          217 SIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             EEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             eEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence            358999999999998764  3689999998643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=85.04  E-value=0.27  Score=37.52  Aligned_cols=28  Identities=7%  Similarity=-0.225  Sum_probs=25.2

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|+|+.+.|++++.++.+.|+||+.+.
T Consensus       224 l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          224 LCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            4899999999999878899999999874

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=83.52  E-value=0.44  Score=37.84  Aligned_cols=31  Identities=6%  Similarity=-0.086  Sum_probs=25.7

Q ss_pred             cccccccccccccccCCCcceEEeecCCceec
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWV   63 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~   63 (214)
                      ...+|+|+.+.|+++..++ +.|+||+.+..-
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            3448999999999998766 999999988643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=81.28  E-value=0.16  Score=38.61  Aligned_cols=21  Identities=24%  Similarity=0.227  Sum_probs=17.5

Q ss_pred             hhccCchhhhhHHHHHHhhhccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVD   32 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~   32 (214)
                      ++|.++++|+|+||    +|++...
T Consensus       133 ylH~~~IiHRDlKp----~NILl~~  153 (299)
T 4g31_A          133 FLHSKGLMHRDLKP----SNIFFTM  153 (299)
T ss_dssp             HHHHTTCCCCCCCG----GGEEECT
T ss_pred             HHHHCcCccccCcH----HHeEECC
Confidence            46778999999999    9998654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=80.94  E-value=0.51  Score=35.78  Aligned_cols=29  Identities=17%  Similarity=0.046  Sum_probs=24.8

Q ss_pred             cccccccccccccCCCcceEEeecCCcee
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACW   62 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~   62 (214)
                      .+|+|+.+.|++++.++.+.|+||+.+..
T Consensus       189 liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          189 VIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCCCCCCccCEEEeCCceEEEecchhccC
Confidence            48999999999998777778999998753

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=80.80  E-value=0.71  Score=34.94  Aligned_cols=29  Identities=14%  Similarity=0.131  Sum_probs=23.8

Q ss_pred             cccccccccccccCC---Cc-ceEEeecCCcee
Q psy16751         34 HFTEDVQTRQYRSLP---PF-LFDIGTYRNACW   62 (214)
Q Consensus        34 ~~h~d~k~~nil~~~---~~-~~kl~Dfg~a~~   62 (214)
                      .+|+|+.+.|+++..   ++ .+.|+||+.+..
T Consensus       192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            379999999999987   34 458999998864

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=80.68  E-value=0.49  Score=34.85  Aligned_cols=28  Identities=7%  Similarity=-0.235  Sum_probs=24.5

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|.|+.+.|++++..+.+-|+||+.+.
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            3799999999999887778899999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=80.47  E-value=0.19  Score=38.91  Aligned_cols=21  Identities=14%  Similarity=0.137  Sum_probs=17.5

Q ss_pred             hhccCchhhhhHHHHHHhhhccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVD   32 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~   32 (214)
                      ++|..+++|+|+||    +|++...
T Consensus       165 ylH~~~IiHRDlKp----~NILl~~  185 (336)
T 4g3f_A          165 YLHTRRILHGDVKA----DNVLLSS  185 (336)
T ss_dssp             HHHTTTEECSCCCG----GGEEECT
T ss_pred             HHHHCCceecccCH----HHEEEeC
Confidence            45788999999999    9998643

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=80.20  E-value=0.18  Score=38.60  Aligned_cols=21  Identities=14%  Similarity=0.115  Sum_probs=17.6

Q ss_pred             hhccCchhhhhHHHHHHhhhccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVD   32 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~   32 (214)
                      ++|.++++|+|+||    +|++...
T Consensus       147 ylH~~~IiHRDlKP----eNILl~~  167 (311)
T 4aw0_A          147 YLHGKGIIHRDLKP----ENILLNE  167 (311)
T ss_dssp             HHHHTTEECSCCSG----GGEEECT
T ss_pred             HHHHCCCccCCCCH----HHeEEcC
Confidence            46788999999999    9998643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=80.02  E-value=0.18  Score=39.44  Aligned_cols=21  Identities=14%  Similarity=-0.005  Sum_probs=17.7

Q ss_pred             hhccCchhhhhHHHHHHhhhccccc
Q psy16751          8 FVAFGSLEETDKKRRLYIRNACWVD   32 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~~~~~~~~~   32 (214)
                      ++|..+++|+|+||    +|++...
T Consensus       132 ylH~~gIiHRDiKP----eNiLl~~  152 (361)
T 4f9c_A          132 RIHQFGIVHRDVKP----SNFLYNR  152 (361)
T ss_dssp             HHHHTTEECSCCSG----GGEEEET
T ss_pred             HHHHCCeEeCcCCH----HHeEEeC
Confidence            46788999999999    9998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-37
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-20
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-19
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-19
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-18
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-18
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-17
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-16
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-16
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-15
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-13
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-09
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.001
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	0.004

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  132 bits (331), Expect = 1e-37
 Identities = 82/163 (50%), Positives = 112/163 (68%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
             I    NACW D+H+T  +QTR+YRS EVL+ A + C ADIWS AC+ FEL TGD+LFE
Sbjct: 171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 230

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           P  G +YT+D+DH+A IIELLG++P  ++++G  +  FF  +G LR+I  LK W L  VL
Sbjct: 231 PDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL 290

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            EKY ++ + A+  S+FL PML  DP+ RA A   + HPWL++
Sbjct: 291 TEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 333

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 7e-20
 Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 10/154 (6%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           D      V TR Y S E L    Y   +DIWS+     E+A G Y   P         E 
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP-----DAKEL 211

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L    ++ GD  +   +         +   + R  P +  ++L   +V +      S  
Sbjct: 212 ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSR--PPMAIFELLDYIVNEPPPKLPSGV 269

Query: 184 ---GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
               F +F+   L  +P  RA     + H +++ 
Sbjct: 270 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 1e-19
 Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 21/165 (12%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
           L D G  ++    ++ +T  V TR YR+ E+L  A  Y    D+W+V C+  EL      
Sbjct: 141 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF 200

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
                GD+   D D L  I E LG   +          ++ T     +  PG+    ++S
Sbjct: 201 LP---GDS---DLDQLTRIFETLGTPTEEQWPDMCSLPDYVT----FKSFPGIPLHHIFS 250

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +             + ++ +  ++P  R TA   L+  +  N
Sbjct: 251 AAGDD----------LLDLIQGLFLFNPCARITATQALKMKYFSN 285

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.5 bits (200), Expect = 5e-19
 Identities = 37/155 (23%), Positives = 54/155 (34%), Gaps = 6/155 (3%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
                   T  V TR YR+ EV++  GY  + DIWSV C+  E+     LF         
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR------ 221

Query: 120 RDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
              D    +IE LG      ++    +   + +                S+         
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             A    + L  ML  DP  R +  D LQHP++  
Sbjct: 282 LKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (196), Expect = 1e-18
 Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 19/165 (11%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           L + G  R      + ++ +V T  YR  +VL  A  Y  S D+WS  C+  ELA     
Sbjct: 142 LANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
             P         +D L  I  LLG   +    S             +  +P  KP+ +Y 
Sbjct: 202 LFPG-----NDVDDQLKRIFRLLGTPTEEQWPS-------------MTKLPDYKPYPMYP 243

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                 N  P+      + L+ +L  +P  R +A + LQHP+  +
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 6e-18
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 59  NACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
                    T  V T  YR+ EVL+ + Y    D+WSV C+  E+     LF        
Sbjct: 164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS----- 218

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
             D D L  I++++G   +                 +  H    +P + +          
Sbjct: 219 -SDVDQLGKILDVIGLPGEEDWPRDVALPR------QAFHSKSAQPIEKFV--------- 262

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
            +      + L   L ++P  R +A   L HP+ Q+
Sbjct: 263 TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 2e-17
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           L D G+ +     + + +            +     Y  S D+WS  C+  EL  G  +F
Sbjct: 164 LCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
              +        D L  II++LG   +  I+  + +   F         P +K      V
Sbjct: 224 PGDS------GVDQLVEIIKVLGTPTREQIREMNPNYTEF-------KFPQIKAHPWTKV 270

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +   TP  A         +L Y P  R T  +   H +   
Sbjct: 271 FRPR---TPPEAI---ALCSRLLEYTPTARLTPLEACAHSFFDE 308

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 2e-17
 Identities = 41/163 (25%), Positives = 60/163 (36%), Gaps = 20/163 (12%)

Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGY-DCSADIWSVACMAFELATGDYLFE 111
           D G  R      + +T +V T  YR+ E+L+   Y   + DIWS+ C+  E+ T   LF 
Sbjct: 145 DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
                    + D L  I   LG   + +        ++          P     D   V+
Sbjct: 205 GD------SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS------FPKWARQDFSKVV 252

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                  P         L  ML YDP  R +A   L HP+ Q+
Sbjct: 253 -------PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 2e-17
 Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 17/155 (10%)

Query: 61  CWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYT 119
                 +T  V T  YR  E+L+    Y    D+W   C+  E+ T   + + +      
Sbjct: 172 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN------ 225

Query: 120 RDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTP 179
            ++  LA I +L G I   +    +  +    +K EL      K  D        Y   P
Sbjct: 226 TEQHQLALISQLCGSITPEVWP--NVDNYELYEKLELVKGQKRKVKDRLK----AYVRDP 279

Query: 180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                  + +  +L  DP  R  + D L H +  +
Sbjct: 280 Y----ALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 2e-16
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
           A   D   T  V TR YR+ EV++N   Y  + DIWSV C+  E+ TG  LF+       
Sbjct: 168 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS----- 222

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
               D L  I+++ G  P   +Q           KG    +P L+  D  S+L       
Sbjct: 223 -DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG----LPELEKKDFASIL------- 270

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             ++      L  ML  D + R TA + L HP+ ++
Sbjct: 271 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 73.0 bits (178), Expect = 5e-16
 Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 11/152 (7%)

Query: 64  DKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
            + +   V +R ++  E+L++   YD S D+WS+ CM   +      F          + 
Sbjct: 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG-----HDNY 237

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
           D L  I ++LG            + E   +  ++      K W+ +     ++  +PE  
Sbjct: 238 DQLVRIAKVLG-TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPE-- 294

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
               +FL  +L YD + R TA + ++HP+   
Sbjct: 295 --ALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.6 bits (177), Expect = 5e-16
 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 20/164 (12%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
           + D G  R      + +T ++ T  YR+ +VL+ +  Y  + DIWSV C+  E+  G  L
Sbjct: 141 IADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F          + D L  I  +LG    +   +     ++         +P         
Sbjct: 201 FPGV------SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD 254

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                            + L  ML  DP  R TA   L+H + +
Sbjct: 255 -------------ESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (173), Expect = 2e-15
 Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 18/155 (11%)

Query: 60  ACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
           A   D   T  V TR YR+ E+++N   Y+ + DIWSV C+  EL TG  LF        
Sbjct: 168 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---- 223

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
               D L  I+ L+G     +++     S        ++ +  +   +  +V        
Sbjct: 224 --HIDQLKLILRLVGTPGAELLKKISSESARNY----IQSLTQMPKMNFANVF------- 270

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             +     + L  ML  D   R TAA  L H +  
Sbjct: 271 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 3e-14
 Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 45/162 (27%)

Query: 53  DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
           D G            +  V T  + + EV+    Y    DIWS+  MA E+  G+  +  
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY-- 216

Query: 113 HAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV 172
                   +E+ L  +          I  +G                P L+  +  S   
Sbjct: 217 -------LNENPLRAL--------YLIATNG---------------TPELQNPEKLS--- 243

Query: 173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                       F +FL   L  D + R +A + LQH +L+ 
Sbjct: 244 ----------AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 6e-14
 Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 18/150 (12%)

Query: 66  HFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
             TE V TR YR+ E+++N  GY  S DIWSV C+  E+ +   +F            D 
Sbjct: 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK------HYLDQ 221

Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
           L HI+ +LG   +  +                       P          +      A  
Sbjct: 222 LNHILGILGSPSQEDLNCIINLKARNYLLS--------LPHKNKVPWNRLFPNADSKAL- 272

Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
             + L  ML ++P  R      L HP+L+ 
Sbjct: 273 --DLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 3e-13
 Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 45/165 (27%)

Query: 50  FLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYL 109
            + D G           F     T ++ + E++        AD+WS+  + + L +G   
Sbjct: 157 KIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           F           ++ LA++  +  +                                   
Sbjct: 216 FLGD------TKQETLANVSAVNYEFED-------------------------------- 237

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              E ++ T   A+   +F+R +L  DPK R T  D LQHPW++ 
Sbjct: 238 ---EYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPWIKP 276

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 4e-13
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 45/163 (27%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + + G  R     D          +Y + EV  +     + D+WS+  + + L +G   F
Sbjct: 145 IIEFGQARQLKPGDNFRLLFT-APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
                     ++  + +I+       +                                 
Sbjct: 204 LAE------TNQQIIENIMNAEYTFDE--------------------------------- 224

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             E +      A    +F+  +L  + K R TA++ LQHPWL+
Sbjct: 225 --EAFKEISIEAM---DFVDRLLVKERKSRMTASEALQHPWLK 262

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 8e-13
 Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 48/143 (33%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
             T  Y   E++    +D   D+WS+  + +E   G   FE    +TY   ++    I  
Sbjct: 165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTY---QETYKRISR 218

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
           +    P  +                                        E AR   + + 
Sbjct: 219 VEFTFPDFV---------------------------------------TEGAR---DLIS 236

Query: 191 PMLAYDPKLRATAADCLQHPWLQ 213
            +L ++P  R    + L+HPW+ 
Sbjct: 237 RLLKHNPSQRPMLREVLEHPWIT 259

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 4e-12
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 47/162 (29%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           L D G  R            V T  Y S E +    Y+  +DIWS+ C+ +EL      F
Sbjct: 155 LGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 214

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
                              EL G I                ++G+ R IP          
Sbjct: 215 TAF-------------SQKELAGKI----------------REGKFRRIP---------- 235

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
               Y ++ E     +E +  ML      R +  + L++P +
Sbjct: 236 ----YRYSDE----LNEIITRMLNLKDYHRPSVEEILENPLI 269

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 6e-12
 Identities = 31/164 (18%), Positives = 51/164 (31%), Gaps = 41/164 (25%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           L D G  +     +   T    T  Y + EVL    YD S D+WS+  + + L  G   F
Sbjct: 155 LTDFGFAKETTSHNSLTTPC-YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 213

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
             +             H + +   +  RI     R  ++     E   +           
Sbjct: 214 YSN-------------HGLAISPGMKTRI-----RMGQYEFPNPEWSEVS---------- 245

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                             +R +L  +P  R T  + + HPW+  
Sbjct: 246 ------------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 277

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 60.8 bits (147), Expect = 9e-12
 Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
           D+       T ++ + E++         D+W++  + + L +G   F          D +
Sbjct: 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLE 235

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
            L ++     +  +                                   + ++     A+
Sbjct: 236 TLQNVKRCDWEFDE-----------------------------------DAFSSVSPEAK 260

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F++ +L  +P+ R T  D L+HPWL+ 
Sbjct: 261 ---DFIKNLLQKEPRKRLTVHDALEHPWLKG 288

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.9 bits (147), Expect = 1e-11
 Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 45/163 (27%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           L D G   +             T ++ + EV          D+WSV  +++ L +G   F
Sbjct: 167 LIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 225

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
               G+    D++ L ++     ++                                   
Sbjct: 226 G---GEN---DDETLRNVKSCDWNMDDSA------------------------------- 248

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
               ++   E  +   +F+R +L  DP  R T    L+HPWL 
Sbjct: 249 ----FSGISEDGK---DFIRKLLLADPNTRMTIHQALEHPWLT 284

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.4 bits (146), Expect = 1e-11
 Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 44/151 (29%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
               +    T  Y + EVL    Y  + D WS+  +A+ L  G   F             
Sbjct: 163 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY------------ 210

Query: 124 HLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
                                  ++ F +  +  +      WD  S              
Sbjct: 211 -------------------DENDAKLFEQILKAEYEFDSPYWDDIS-------------D 238

Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
              +F+R ++  DP+ R T    LQHPW+  
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 1e-10
 Identities = 25/155 (16%), Positives = 47/155 (30%), Gaps = 47/155 (30%)

Query: 60  ACWVDKHFTEDVQ-TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
           A      F + V  T ++ + E+     YD S D+++      E+AT +Y +        
Sbjct: 162 ATLKRASFAKAVIGTPEFMAPEMY-EEKYDESVDVYAFGMCMLEMATSEYPYS------- 213

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
             +  + A I         R + SG + + F                             
Sbjct: 214 --ECQNAAQIY--------RRVTSGVKPASF----------------------------D 235

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
             +     E +   +  +   R +  D L H + Q
Sbjct: 236 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 2e-10
 Identities = 27/165 (16%), Positives = 48/165 (29%), Gaps = 49/165 (29%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  +     D        T  Y + E+L+   Y+ S D WS   + +E+  G   F
Sbjct: 144 IADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 203

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
                                 G   + +  S    + F+ +                  
Sbjct: 204 H---------------------GQDEEELFHSIRMDNPFYPR------------------ 224

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA-DCLQHPWLQN 214
                 W  + A+   + L  +   +P+ R     D  QHP  + 
Sbjct: 225 ------WLEKEAK---DLLVKLFVREPEKRLGVRGDIRQHPLFRE 260

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 25/139 (17%), Positives = 39/139 (28%), Gaps = 44/139 (31%)

Query: 75  QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGD 134
                    + GY    D+WS   + + L  G   F       + R +  +  +I     
Sbjct: 180 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-------WHRKQMLMLRMI----- 227

Query: 135 IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLA 194
                              G  +   G   WD YS                 + +   L 
Sbjct: 228 -----------------MSGNYQ--FGSPEWDDYS-------------DTVKDLVSRFLV 255

Query: 195 YDPKLRATAADCLQHPWLQ 213
             P+ R TA + L HP+ Q
Sbjct: 256 VQPQKRYTAEEALAHPFFQ 274

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 19/151 (12%), Positives = 34/151 (22%), Gaps = 46/151 (30%)

Query: 64  DKHFTEDVQTRQYRSLEVLINAGYDC-SADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
           ++   +   T  Y + E+L    +     D+WS   +   +  G+  ++         D 
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD------QPSDS 212

Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
                                                  L PW                 
Sbjct: 213 CQEYSDW--------------------------KEKKTYLNPWKKID------------- 233

Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
                 L  +L  +P  R T  D  +  W  
Sbjct: 234 SAPLALLHKILVENPSARITIPDIKKDRWYN 264

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 9e-10
 Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 50/169 (29%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI-----NAGYDCSADIWSVACMAFELAT 105
           L D G         +     + T  + + EV++     +  YD  AD+WS+     E+A 
Sbjct: 151 LADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 210

Query: 106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPW 165
            +             + + +  ++++    P  + Q    SS F                
Sbjct: 211 IEPPHH---------ELNPMRVLLKIAKSEPPTLAQPSRWSSNFK--------------- 246

Query: 166 DLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                                +FL+  L  +   R T +  LQHP++  
Sbjct: 247 ---------------------DFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 27/169 (15%), Positives = 47/169 (27%), Gaps = 54/169 (31%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
           F      +           V T QY S E+L       S+D+W++ C+ ++L  G     
Sbjct: 152 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP--- 208

Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
           P        +      II+L  D P++                                 
Sbjct: 209 PFRAGN---EYLIFQKIIKLEYDFPEKF-------------------------------- 233

Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC------LQHPWLQN 214
                     AR   + +  +L  D   R    +         HP+ ++
Sbjct: 234 -------FPKAR---DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 32/165 (19%), Positives = 49/165 (29%), Gaps = 57/165 (34%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGY-DCSADIWSVACMAFELATGDYL 109
           L D G+       D  +T+   TR Y   E +    Y   SA +WS+  + +++  GD  
Sbjct: 152 LIDFGSGA--LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
           FE            H   II       +R+                              
Sbjct: 210 FE------------HDEEIIRGQVFFRQRV------------------------------ 227

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
                        +     +R  LA  P  R T  +   HPW+Q+
Sbjct: 228 ---------SSECQ---HLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 9e-09
 Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 53/169 (31%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
           + D G  +              T +Y + EVL +  Y  + D W +  + +E+  G   F
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
                  Y +D + L  +I                                         
Sbjct: 206 -------YNQDHERLFELI----------------------------------------- 217

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLR-----ATAADCLQHPWLQN 214
           L+E+  +    +      L  +L  DPK R     + A + ++H +  +
Sbjct: 218 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 29/147 (19%), Positives = 44/147 (29%), Gaps = 49/147 (33%)

Query: 71  VQTRQYRSLEVLI---NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAH 127
           V T  + + EV++      YD   D+WS+     ELA                    L H
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYH 225

Query: 128 IIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE 187
           I +   + P   +QSGH S  F                                      
Sbjct: 226 IAQ--NESPA--LQSGHWSEYF------------------------------------RN 245

Query: 188 FLRPMLAYDPKLRATAADCLQHPWLQN 214
           F+   L   P+ R T+   L+H ++  
Sbjct: 246 FVDSCLQKIPQDRPTSEVLLKHRFVLR 272

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (115), Expect = 1e-07
 Identities = 24/166 (14%), Positives = 41/166 (24%), Gaps = 53/166 (31%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           I  +  A +V         T  Y + EV+    Y+ S D WS   + +E+  G   F   
Sbjct: 145 ITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-- 202

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
                                   +  +                            +L  
Sbjct: 203 -------------------DSNTMKTYEK---------------------------ILNA 216

Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLR-----ATAADCLQHPWLQN 214
           +  + P       + L  ++  D   R         D   HPW + 
Sbjct: 217 ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.0 bits (111), Expect = 4e-07
 Identities = 22/143 (15%), Positives = 40/143 (27%), Gaps = 44/143 (30%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
           + T QY S E       D  +D++S+ C+ +E+ TG+  F                    
Sbjct: 175 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------------------- 215

Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
                       G        +      IP     +  S                   + 
Sbjct: 216 ------------GDSPVSVAYQHVREDPIPPSARHEGLS-------------ADLDAVVL 250

Query: 191 PMLAYDPKLRATAADCLQHPWLQ 213
             LA +P+ R   A  ++   ++
Sbjct: 251 KALAKNPENRYQTAAEMRADLVR 273

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 8e-07
 Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 50/169 (29%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLF 110
           F +     A   ++ +             V   ++G+D + D WS+  + +EL TG   F
Sbjct: 173 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 232

Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
                                  +I +RI++S                            
Sbjct: 233 TVD-------------GEKNSQAEISRRILKS---------------------------- 251

Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLR-----ATAADCLQHPWLQN 214
              +  +  E +    + ++ +L  DPK R       A +  +H + Q 
Sbjct: 252 ---EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 6/77 (7%)

Query: 71  VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAH--- 127
             T +Y S+   +        D+ ++  +      G   ++     T  +  + +     
Sbjct: 174 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 233

Query: 128 ---IIELLGDIPKRIIQ 141
              + EL    P+   +
Sbjct: 234 STPLRELCAGFPEEFYK 250

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 10/159 (6%), Positives = 34/159 (21%), Gaps = 43/159 (27%)

Query: 59  NACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
           +     +       T +Y S+   +        D+ S+  +      G   ++     T 
Sbjct: 162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT- 220

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
                             ++  +           +   +  P                  
Sbjct: 221 -----------------KRQKYERISEKKMSTPIEVLCKGYP------------------ 245

Query: 179 PESARGFSEFLRPMLAYDPKLRATAA---DCLQHPWLQN 214
                 F+ +L    +     +   +      ++ + + 
Sbjct: 246 ----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.3 bits (104), Expect = 3e-06
 Identities = 28/152 (18%), Positives = 40/152 (26%), Gaps = 59/152 (38%)

Query: 73  TRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIEL 131
           T  Y + EVL     YD SAD +S+ CM F+L  G   F                     
Sbjct: 168 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF--------------------- 206

Query: 132 LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE---- 187
                                          K  D + +         E    FS     
Sbjct: 207 ----------------------------RQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 238

Query: 188 FLRPMLAYDPKLRAT-----AADCLQHPWLQN 214
            L  +L  D   R       A +  + P+ ++
Sbjct: 239 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 24/166 (14%), Positives = 46/166 (27%), Gaps = 53/166 (31%)

Query: 54  IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
           +  +  A  V         T +  + E++++ GY+ + D W++  + +E+A G   F   
Sbjct: 182 VTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF-- 239

Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
                               D P +I +                                
Sbjct: 240 -------------------ADQPIQIYEKIVS---------------------------G 253

Query: 174 KYNWTPESARGFSEFLRPMLAYDPK-----LRATAADCLQHPWLQN 214
           K  +    +    + LR +L  D       L+    D   H W   
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 20/160 (12%), Positives = 42/160 (26%), Gaps = 47/160 (29%)

Query: 51  LFDIGTYRNACWVDKHFTEDVQ-TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYL 109
           + D G  R         +   +   ++ S EV   + Y   +D+WS   + +E+ +   +
Sbjct: 142 VSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201

Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
              +      R    +   I                        G   + P L    +Y 
Sbjct: 202 PYEN------RSNSEVVEDI----------------------STGFRLYKPRLASTHVY- 232

Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH 209
                            + +       P+ R   +  L+ 
Sbjct: 233 -----------------QIMNHCWKERPEDRPAFSRLLRQ 255

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 16/151 (10%), Positives = 37/151 (24%), Gaps = 46/151 (30%)

Query: 59  NACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
                           ++ + E L    +   +D+WS   + +E+ +   +  P      
Sbjct: 149 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP------ 202

Query: 119 TRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWT 178
                 L  ++  +                   +KG     P   P  +Y          
Sbjct: 203 ---RIPLKDVVPRV-------------------EKGYKMDAPDGCPPAVY---------- 230

Query: 179 PESARGFSEFLRPMLAYDPKLRATAADCLQH 209
                   E ++     D  +R +     + 
Sbjct: 231 --------EVMKNCWHLDAAMRPSFLQLREQ 253

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 32/152 (21%)

Query: 63  VDKHFTEDVQTRQYRSLEVL------INAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
           +D      V T++Y + EVL       +      ADI+++  + +E+A    +   H   
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224

Query: 117 TYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN 176
                +   +     + ++ K + +   R +                        +    
Sbjct: 225 QLPYYDLVPSDPS--VEEMRKVVCEQKLRPN------------------------IPNRW 258

Query: 177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQ 208
            + E+ R  ++ +R     +   R TA    +
Sbjct: 259 QSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 20/161 (12%), Positives = 45/161 (27%), Gaps = 45/161 (27%)

Query: 52  FDIGTYRNACWVDKHFTEDVQTRQYRSLEVL---INAGYDCSADIWSVACMAFELATGDY 108
           F + T ++       F +   +  + + EV+       Y   +D+++   + +EL TG  
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

Query: 109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLY 168
            +          + ++   II         ++  G+ S        +L  +    P  + 
Sbjct: 208 PYS---------NINNRDQII--------FMVGRGYLS-------PDLSKVRSNCPKAMK 243

Query: 169 SVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH 209
                               +   L      R      L  
Sbjct: 244 ------------------RLMAECLKKKRDERPLFPQILAS 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 3e-04
 Identities = 21/161 (13%), Positives = 44/161 (27%), Gaps = 48/161 (29%)

Query: 51  LFDIGTYRNACWVDKHFTED--VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDY 108
           + D G  +     +K +  +      ++ +LE +++  Y   +D+WS     +EL T   
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211

Query: 109 LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLY 168
                           ++ I+                      +KGE    P +   D+Y
Sbjct: 212 KPYDG------IPASEISSIL----------------------EKGERLPQPPICTIDVY 243

Query: 169 SVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH 209
                               +      D   R    + +  
Sbjct: 244 ------------------MIMVKCWMIDADSRPKFRELIIE 266

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 46/137 (33%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
             ++ +LE L    +   +D+WS   + +EL T      P          D   +++   
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLL--- 248

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
                               +G     P   P  LY                  E +   
Sbjct: 249 --------------------QGRRLLQPEYCPDPLY------------------EVMLKC 270

Query: 193 LAYDPKLRATAADCLQH 209
                ++R + ++ +  
Sbjct: 271 WHPKAEMRPSFSELVSR 287

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 16/144 (11%), Positives = 37/144 (25%), Gaps = 48/144 (33%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
             ++ + E  +   +   +D+WS   +  EL T   +  P                    
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP-------------------- 216

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
           G + + ++           ++G     P                  PE      + +   
Sbjct: 217 GMVNREVLD--------QVERGYRMPCP------------------PECPESLHDLMCQC 250

Query: 193 LAYDPKLRATAADCLQ--HPWLQN 214
              +P+ R T          +  +
Sbjct: 251 WRKEPEERPTFEYLQAFLEDYFTS 274

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 17/145 (11%), Positives = 38/145 (26%), Gaps = 46/145 (31%)

Query: 65  KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
                     ++   EVL+ + +   +DIW+   + +E+ +   +  P+   T +   +H
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM--PYERFTNSETAEH 213

Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
           +                           +G   + P L    +Y                
Sbjct: 214 I--------------------------AQGLRLYRPHLASEKVY---------------- 231

Query: 185 FSEFLRPMLAYDPKLRATAADCLQH 209
               +          R T    L +
Sbjct: 232 --TIMYSCWHEKADERPTFKILLSN 254

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 46/137 (33%)

Query: 73  TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
             ++ + E L +  Y   +D+WS   + +E+ T      P          + L  ++   
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELFKLL--- 250

Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
                              K+G     P     +LY                    +R  
Sbjct: 251 -------------------KEGHRMDKPSNCTNELY------------------MMMRDC 273

Query: 193 LAYDPKLRATAADCLQH 209
               P  R T    ++ 
Sbjct: 274 WHAVPSQRPTFKQLVED 290

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 22/160 (13%), Positives = 44/160 (27%), Gaps = 49/160 (30%)

Query: 57  YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
            R      K  T      ++ + E +    +   +D+WS   + +E  +      P+ G 
Sbjct: 157 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK--PYRGM 214

Query: 117 TYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN 176
                   +  ++E                      KGE    P   P ++Y        
Sbjct: 215 K----GSEVTAMLE----------------------KGERMGCPAGCPREMY-------- 240

Query: 177 WTPESARGFSEFLRPMLAYDPKLRATAAD---CLQHPWLQ 213
                     + +     YD + R   A     L++ +  
Sbjct: 241 ----------DLMNLCWTYDVENRPGFAAVELRLRNYYYD 270

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.67
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	82.91
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	82.79
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	82.09

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-38  Score=238.10  Aligned_cols=167  Identities=14%  Similarity=0.134  Sum_probs=126.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~   73 (214)
                      +|++++.....+.+.+++..+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|+....     .....+||
T Consensus        89 ~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT  168 (271)
T d1nvra_          89 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT  168 (271)
T ss_dssp             EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSC
T ss_pred             cHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeC
Confidence            6888888877887777755322  222  36777789999999999999999999999999987632     24456899


Q ss_pred             CcccchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         74 RQYRSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        74 ~~y~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      +.|+|||++.+.++ +.++||||+||++++|++|++||.....     .......+ .......                
T Consensus       169 ~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~-----~~~~~~~~-~~~~~~~----------------  226 (271)
T d1nvra_         169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-----SCQEYSDW-KEKKTYL----------------  226 (271)
T ss_dssp             GGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST-----TSHHHHHH-HTTCTTS----------------
T ss_pred             cCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh-----HHHHHHHH-hcCCCCC----------------
Confidence            99999999998876 5789999999999999999999975431     11111111 1000000                


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             ......+.++.+||.+||+.||++|||++|+|+||||++
T Consensus       227 -----------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         227 -----------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             -----------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             -----------------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence                                   011334567789999999999999999999999999974

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=247.13  Aligned_cols=204  Identities=19%  Similarity=0.204  Sum_probs=126.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhhc--ccc-cccccccccccccccCCCcceEEeecCCceecc-CCCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRNA--CWV-DKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD-KHFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~~--~~~-~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~~~y   76 (214)
                      +|++++.+.+.+.+..++...+  +..+  +|. +.++|||+||+||++..++.+||+|||+|+... ...+..+||+.|
T Consensus        90 ~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y  169 (322)
T d1s9ja_          90 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY  169 (322)
T ss_dssp             EHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCC
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccc
Confidence            6778888777777777755332  3333  553 468999999999999999999999999998764 344567999999


Q ss_pred             cchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         77 RSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        77 ~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      +|||++.+.+|+.++||||+||+++||++|+.||.+.+.     ...+........|........ ........ .....
T Consensus       170 ~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~  242 (322)
T d1s9ja_         170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA-----KELELMFGCQVEGDAAETPPR-PRTPGRPL-SSYGM  242 (322)
T ss_dssp             CCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT-----THHHHHC-----------------------------
T ss_pred             cCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHhcCCcccCCcc-cccccccc-ccccc
Confidence            999999999999999999999999999999999986542     222332222222322111000 00000000 00000


Q ss_pred             ccCCCCCCCchhhHHHhhc---CCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKY---NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ...+...............   ......+.++.|||.+||++||++||||+|+|+||||+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~  302 (322)
T d1s9ja_         243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  302 (322)
T ss_dssp             ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhC
Confidence            0000000000000000000   01123456789999999999999999999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-37  Score=239.84  Aligned_cols=166  Identities=20%  Similarity=0.286  Sum_probs=130.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceecc--CCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|.++++|||+||+||+++..+.+||+|||.++...  ......+||+.|+|||++.+.+|+.++||||+||++++|++
T Consensus       131 yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~  210 (305)
T d1blxa_         131 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR  210 (305)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHH
Confidence            3777778999999999999999999999999988664  33456799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      |.+||.+.+      ..+++.++.+..|.++..................        .....       .......+..+
T Consensus       211 g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-------~~~~~~~s~~~  269 (305)
T d1blxa_         211 RKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK--------SAQPI-------EKFVTDIDELG  269 (305)
T ss_dssp             SSCSCCCSS------HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC--------CCCCG-------GGTCCSCCHHH
T ss_pred             CCCCCCCCC------HHHHHHHHHHhhCCCchhcccccccchhhhhccc--------cccch-------hhccccCCHHH
Confidence            999998655      6889999999999877654433222211110000        00000       00123445678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .+||.+||++||++||||+|+|+||||++
T Consensus       270 ~dli~~mL~~dP~~R~sa~e~L~Hpff~~  298 (305)
T d1blxa_         270 KDLLLKCLTFNPAKRISAYSALSHPYFQD  298 (305)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHCcCChhHCcCHHHHhcChhhcC
Confidence            89999999999999999999999999975

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-38  Score=239.79  Aligned_cols=184  Identities=19%  Similarity=0.282  Sum_probs=135.7

Q ss_pred             cCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHh
Q psy16751         11 FGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLI   83 (214)
Q Consensus        11 ~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~   83 (214)
                      ...+.+..++...+  +..  .+|.++++|||+||+||+++.++.+||+|||.|+.....   ....+||+.|+|||++.
T Consensus        94 ~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  173 (299)
T d1ua2a_          94 SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF  173 (299)
T ss_dssp             CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHc
Confidence            34455555544222  222  377778899999999999999999999999999876542   34458999999999998


Q ss_pred             cC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCC
Q psy16751         84 NA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGL  162 (214)
Q Consensus        84 ~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (214)
                      +. .|+.++||||+||++++|++|.+||.+.+      +.+++.++.+..|.++.+.............       ....
T Consensus       174 ~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~------~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  240 (299)
T d1ua2a_         174 GARMYGVGVDMWAVGCILAELLLRVPFLPGDS------DLDQLTRIFETLGTPTEEQWPDMCSLPDYVT-------FKSF  240 (299)
T ss_dssp             TCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC-------CCCC
T ss_pred             cCCCCChhhhhhhcchHHHHHHhCcCCCCCCC------HHHHHHHHHHhcCCCChhhccchhccchhhh-------hccC
Confidence            65 58999999999999999999999998655      7889999999999887654433222211110       0111


Q ss_pred             CCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        163 KPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ........       ....+.++.+||.+||++||++||||+|+|+||||++
T Consensus       241 ~~~~~~~~-------~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~  285 (299)
T d1ua2a_         241 PGIPLHHI-------FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  285 (299)
T ss_dssp             CCCCHHHH-------CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             CCCChHHh-------cccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCC
Confidence            11111111       1234567899999999999999999999999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-38  Score=237.34  Aligned_cols=163  Identities=15%  Similarity=0.325  Sum_probs=128.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~   77 (214)
                      +|.+++.+...+.+..++..+.  +..  .+|..+++|||+||+||+++.++.+||+|||+|..... .....+||+.|+
T Consensus        92 ~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~  171 (263)
T d2j4za1          92 TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL  171 (263)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGC
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCccc
Confidence            6777777777777777654322  222  36777889999999999999999999999999987643 345568999999


Q ss_pred             chHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccc
Q psy16751         78 SLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELR  157 (214)
Q Consensus        78 aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  157 (214)
                      |||++.+.+|+.++||||+||++++|++|+.||.+.+      ..+.+..+.+.  .                       
T Consensus       172 APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~--~-----------------------  220 (263)
T d2j4za1         172 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRV--E-----------------------  220 (263)
T ss_dssp             CHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTT--C-----------------------
T ss_pred             CHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC------HHHHHHHHHcC--C-----------------------
Confidence            9999999999999999999999999999999997543      33333333221  0                       


Q ss_pred             cCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        158 HIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                       ...+...+.++.+|+.+||+.||++|||++|+|+||||+
T Consensus       221 -----------------~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~  259 (263)
T d2j4za1         221 -----------------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT  259 (263)
T ss_dssp             -----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred             -----------------CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcC
Confidence                             012234556788999999999999999999999999985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-37  Score=235.33  Aligned_cols=165  Identities=18%  Similarity=0.205  Sum_probs=126.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|++++ ..+.+.+.+++..+.  +..  .+|..+++|||+||+||+++.++.+||+|||+|+....   .....+||+.
T Consensus       103 ~L~~~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~  181 (293)
T d1yhwa1         103 SLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY  181 (293)
T ss_dssp             BHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGG
T ss_pred             cHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCC
Confidence            455544 345666666644222  222  36777789999999999999999999999999987643   3445689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++||||+||++++|++|..||.+.+      ..+.+..+... +.++.                  
T Consensus       182 Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~~~~~-~~~~~------------------  236 (293)
T d1yhwa1         182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIATN-GTPEL------------------  236 (293)
T ss_dssp             GCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHH-CSCCC------------------
T ss_pred             ccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCC------HHHHHHHHHhC-CCCCC------------------
Confidence            999999999999999999999999999999999997544      44555544432 11100                  


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                          ..+...+..+.+||.+||+.||++|||++|+|+||||+
T Consensus       237 --------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~  274 (293)
T d1yhwa1         237 --------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK  274 (293)
T ss_dssp             --------------------SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGG
T ss_pred             --------------------CCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence                                01234556789999999999999999999999999996

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.6e-37  Score=239.73  Aligned_cols=186  Identities=45%  Similarity=0.849  Sum_probs=155.4

Q ss_pred             ccc-cccccccccccccccCCCc------ceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         29 CWV-DKHFTEDVQTRQYRSLPPF------LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~-~~~~h~d~k~~nil~~~~~------~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      +|. .+++|||+||+||+++..+      .++++|||.|..........+||+.|+|||++.+.+|+.++|+||+||+++
T Consensus       141 lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  220 (362)
T d1q8ya_         141 MHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF  220 (362)
T ss_dssp             HHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHH
T ss_pred             HhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHH
Confidence            444 5689999999999997654      499999999998887778889999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      ++++|+.||.+..+.........+......+|.++..+.........++...............................
T Consensus       221 el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (362)
T d1q8ya_         221 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE  300 (362)
T ss_dssp             HHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHH
T ss_pred             HHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCccc
Confidence            99999999987766666667788888999999999998888887777777777777777777777777777777788888


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.++.|||.+||++||.+||||+|||+||||++
T Consensus       301 ~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~  333 (362)
T d1q8ya_         301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  333 (362)
T ss_dssp             HHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcccCC
Confidence            999999999999999999999999999999974

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.6e-37  Score=239.98  Aligned_cols=164  Identities=15%  Similarity=0.234  Sum_probs=131.1

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|+.++.+.+.+.+..++..+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|+..........||+.|+|
T Consensus       127 ~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~A  206 (350)
T d1rdqe_         127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALA  206 (350)
T ss_dssp             BHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCC
T ss_pred             chhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCC
Confidence            4666777777777766654222  222  377778899999999999999999999999999998877777899999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+.+|+.++||||+||++|+|++|..||.+.+      ....+..+...  .+                       
T Consensus       207 PE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~~~--~~-----------------------  255 (350)
T d1rdqe_         207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVSG--KV-----------------------  255 (350)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--CC-----------------------
T ss_pred             HHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC------HHHHHHHHhcC--CC-----------------------
Confidence            999999999999999999999999999999997543      34444444321  10                       


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                       ..+...++++.+||.+||+.||.+|+     |++++++||||++
T Consensus       256 -----------------~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~  299 (350)
T d1rdqe_         256 -----------------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             -----------------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             -----------------CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccC
Confidence                             12234456788999999999999995     9999999999974

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.5e-37  Score=235.24  Aligned_cols=168  Identities=21%  Similarity=0.322  Sum_probs=117.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccC---CCcceEEeecCCceeccC--CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSL---PPFLFDIGTYRNACWVDK--HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~---~~~~~kl~Dfg~a~~~~~--~~~~~~~~   73 (214)
                      +|++++...+.+.+.++...+.  +..  .+|.++++|||+||+||++.   .++.+||+|||+|+....  .....+||
T Consensus        93 ~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT  172 (307)
T d1a06a_          93 ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT  172 (307)
T ss_dssp             BHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------
T ss_pred             cHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeC
Confidence            6888888888887777754322  222  36777889999999999984   478999999999987643  34456899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+.+|+.++||||+||++++|++|.+||.+.+      ..+....+.+.-..++.                
T Consensus       173 ~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~----------------  230 (307)
T d1a06a_         173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN------DAKLFEQILKAEYEFDS----------------  230 (307)
T ss_dssp             CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHTTCCCCCT----------------
T ss_pred             ccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHhccCCCCCC----------------
Confidence            99999999999999999999999999999999999997543      33333333321000000                


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                            ......++++.+||.+||+.||++|||++|+|+||||++
T Consensus       231 ----------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         231 ----------------------PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             ----------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             ----------------------ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence                                  012345567899999999999999999999999999973

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-37  Score=231.28  Aligned_cols=165  Identities=15%  Similarity=0.222  Sum_probs=121.8

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhhhc--ccccc--cccccccccccccC-CCcceEEeecCCceeccC-CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIRNA--CWVDK--HFTEDVQTRQYRSL-PPFLFDIGTYRNACWVDK-HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~~~--~~~~~--~~h~d~k~~nil~~-~~~~~kl~Dfg~a~~~~~-~~~~~~~~~   74 (214)
                      +|.+++.+...+....++..+  .+..+  +|.++  ++|||+||+||++. .++.+||+|||+|+.... .....+||+
T Consensus        98 ~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~  177 (270)
T d1t4ha_          98 TLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP  177 (270)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred             cHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCc
Confidence            567777776666665554321  13333  56566  79999999999996 578999999999986543 345668999


Q ss_pred             cccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccC
Q psy16751         75 QYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKG  154 (214)
Q Consensus        75 ~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  154 (214)
                      .|+|||++.+ +|+.++||||+||++++|++|..||.+..      ....+...... +..+..                
T Consensus       178 ~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~------~~~~~~~~i~~-~~~~~~----------------  233 (270)
T d1t4ha_         178 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVTS-GVKPAS----------------  233 (270)
T ss_dssp             CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHTT-TCCCGG----------------
T ss_pred             cccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcc------cHHHHHHHHHc-CCCCcc----------------
Confidence            9999998865 69999999999999999999999997543      23333222211 111111                


Q ss_pred             ccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        155 ELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                            .+...++++.+||.+||+.||++|||++|+|+||||+
T Consensus       234 ----------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         234 ----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             ----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             ----------------------cCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                                  1123345678999999999999999999999999996

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-37  Score=233.50  Aligned_cols=164  Identities=18%  Similarity=0.294  Sum_probs=125.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~   73 (214)
                      +|++++...+.+...+++..+.  +..  .+|..+++|||+||+||+++.++.+||+|||+|+....     .....+||
T Consensus        94 ~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT  173 (288)
T d1uu3a_          94 ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT  173 (288)
T ss_dssp             EHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCC
T ss_pred             CHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCC
Confidence            5677777777777776654222  222  37777889999999999999999999999999987642     23345899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+..|+.++||||+||++++|++|..||.+.+      ..+.+.++.+.  .                   
T Consensus       174 ~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~--~-------------------  226 (288)
T d1uu3a_         174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EYLIFQKIIKL--E-------------------  226 (288)
T ss_dssp             GGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHTT--C-------------------
T ss_pred             ccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC------HHHHHHHHHcC--C-------------------
Confidence            99999999999999999999999999999999999997543      34444443321  0                   


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHH------HhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAAD------CLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e------~l~hp~f~~  214 (214)
                                           ...+...++++.+||.+||+.||++|||++|      +++||||++
T Consensus       227 ---------------------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~  272 (288)
T d1uu3a_         227 ---------------------YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  272 (288)
T ss_dssp             ---------------------CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             ---------------------CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCC
Confidence                                 0122344567889999999999999999988      578999974

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-36  Score=233.30  Aligned_cols=164  Identities=16%  Similarity=0.216  Sum_probs=127.9

Q ss_pred             cchhhhhccCchhhhhHHHHH--Hhhh--cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRL--YIRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~--~~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|..++.....+....++...  .+..  .+|.++++|||+||+||+++.++.+||+|||+|+.........+||+.|+|
T Consensus        90 ~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~A  169 (316)
T d1fota_          90 ELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIA  169 (316)
T ss_dssp             BHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCC
T ss_pred             cccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccC
Confidence            344555555555555543311  1222  367778899999999999999999999999999998887778899999999


Q ss_pred             hHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcccc
Q psy16751         79 LEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRH  158 (214)
Q Consensus        79 PE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  158 (214)
                      ||++.+.+|+.++||||+||++++|++|..||.+.+      ..+.+.++...  .                        
T Consensus       170 PE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~~~--~------------------------  217 (316)
T d1fota_         170 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNA--E------------------------  217 (316)
T ss_dssp             HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHC--C------------------------
T ss_pred             HHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC------HHHHHHHHHcC--C------------------------
Confidence            999999999999999999999999999999997544      34444444321  1                        


Q ss_pred             CCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                      ...+...+.++.+++.+||+.||.+|+     |++++|+||||++
T Consensus       218 ----------------~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~  262 (316)
T d1fota_         218 ----------------LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  262 (316)
T ss_dssp             ----------------CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             ----------------CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCccccc
Confidence                            012234456788999999999999996     8999999999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-36  Score=235.69  Aligned_cols=164  Identities=15%  Similarity=0.176  Sum_probs=129.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|++++.+...+.+..++..+.  +..  .+|.++++|||+||+||+++.+|.+||+|||+|+....   .....+||+.
T Consensus        91 ~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~  170 (337)
T d1o6la_          91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  170 (337)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGG
T ss_pred             chhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHH
Confidence            5777777777777777755322  222  37778889999999999999999999999999986532   3455689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++|+||+||++++|++|++||.+.+      ..+....+..  +.                     
T Consensus       171 Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~------~~~~~~~i~~--~~---------------------  221 (337)
T d1o6la_         171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILM--EE---------------------  221 (337)
T ss_dssp             GCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CC---------------------
T ss_pred             HhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcC------HHHHHHHHhc--CC---------------------
Confidence            999999999999999999999999999999999998644      3333333322  11                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                         ...+...++++.+||.+||++||++|++     ++|+++||||++
T Consensus       222 -------------------~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         222 -------------------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             -------------------CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence                               1123445667899999999999999994     899999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.5e-36  Score=235.67  Aligned_cols=168  Identities=17%  Similarity=0.254  Sum_probs=126.8

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hhh--cccccccccccccccccccC--CCcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSL--PPFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~--~~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.... .+....+...+.  +..  .+|.++++|||+||+||++.  .++.+||+|||+|+.....  .....||
T Consensus       109 ~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT  188 (350)
T d1koaa2         109 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT  188 (350)
T ss_dssp             BHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSC
T ss_pred             CHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCc
Confidence            6777775543 455555543211  222  37777889999999999985  3689999999999877543  3346899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+.+|+.++||||+||++++|++|..||.+.+      ..+.+..+...-..++..               
T Consensus       189 ~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~---------------  247 (350)
T d1koaa2         189 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDDS---------------  247 (350)
T ss_dssp             TTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCSCCG---------------
T ss_pred             ccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCcc---------------
Confidence            99999999999999999999999999999999999997544      455555554322221110               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             .....+.++.+||.+||++||++|||++|+|+||||++
T Consensus       248 -----------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~  285 (350)
T d1koaa2         248 -----------------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP  285 (350)
T ss_dssp             -----------------------GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSC
T ss_pred             -----------------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                                   01234567889999999999999999999999999973

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=231.70  Aligned_cols=166  Identities=17%  Similarity=0.210  Sum_probs=124.2

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~   74 (214)
                      +|.+++.+.. .+.+.+++....  +..  .+|.++++|||+||+||+++.++.+||+|||+|+....   .....+||+
T Consensus        95 ~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~  174 (288)
T d2jfla1          95 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP  174 (288)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCC
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCccccccccccc
Confidence            5666666544 366665544221  222  26777889999999999999999999999999986642   234568999


Q ss_pred             cccchHHHh-----cCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccc
Q psy16751         75 QYRSLEVLI-----NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEF  149 (214)
Q Consensus        75 ~y~aPE~~~-----~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  149 (214)
                      .|+|||++.     +.+|+.++||||+||++++|++|..||.+.+      ..+.+.++...  .++.            
T Consensus       175 ~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~------~~~~~~~i~~~--~~~~------------  234 (288)
T d2jfla1         175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN------PMRVLLKIAKS--EPPT------------  234 (288)
T ss_dssp             TTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC------GGGHHHHHHHS--CCCC------------
T ss_pred             ccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCC------HHHHHHHHHcC--CCCC------------
Confidence            999999995     3458899999999999999999999997544      34444444321  1100            


Q ss_pred             ccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        150 FTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                               ...+...+.++.+||.+||+.||++|||++|+|+||||+
T Consensus       235 -------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         235 -------------------------LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             -------------------------CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             -------------------------CCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence                                     001234556789999999999999999999999999996

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-36  Score=232.71  Aligned_cols=190  Identities=26%  Similarity=0.366  Sum_probs=143.5

Q ss_pred             hhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHh
Q psy16751          8 FVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI   83 (214)
Q Consensus         8 ~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~   83 (214)
                      +.+..++....++....  +.  ..+|.++++|||+||+||+++.++.+|++|||+|+..+...+..+||+.|+|||++.
T Consensus       112 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~  191 (346)
T d1cm8a_         112 LMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVIL  191 (346)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHH
T ss_pred             HHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHc
Confidence            34455666666544222  22  237777889999999999999999999999999999988888889999999999998


Q ss_pred             cC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCC
Q psy16751         84 NA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGL  162 (214)
Q Consensus        84 ~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (214)
                      +. .++.++||||+||++++|++|.+||.+.+      ...++..+.+..+.++.++..............    ..+..
T Consensus       192 ~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  261 (346)
T d1cm8a_         192 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK----GLPEL  261 (346)
T ss_dssp             TTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH----HSCCC
T ss_pred             CCCCCCccchhhcchHHHHHHHHCcCCCCCCC------hHHHHHHHHhccCCCcHHHHhhhcchhhhhhhc----cCCcc
Confidence            76 47899999999999999999999998655      688889999999999888765443322111000    00111


Q ss_pred             CCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        163 KPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .......       .....++++.+||.+||++||++||||+|+|+||||++
T Consensus       262 ~~~~~~~-------~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         262 EKKDFAS-------ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             CCCCGGG-------TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             cccchHH-------hccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence            1111100       12344567889999999999999999999999999974

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.3e-36  Score=235.17  Aligned_cols=168  Identities=15%  Similarity=0.260  Sum_probs=128.9

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hhh--cccccccccccccccccccC--CCcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSL--PPFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~--~~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++.... ++.+.+++..+.  +..  .+|.++++|||+||.||+++  .++.+||+|||+|+.....  .....||
T Consensus       112 ~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt  191 (352)
T d1koba_         112 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT  191 (352)
T ss_dssp             BHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSS
T ss_pred             hHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCc
Confidence            6777766654 466666644322  222  37777789999999999987  5789999999999887543  3445899


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||++.+.+|+.++||||+||++++|++|..||.+.+      ..+.+..+.+....++..               
T Consensus       192 ~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~~~---------------  250 (352)
T d1koba_         192 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWEFDED---------------  250 (352)
T ss_dssp             GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCCCCSS---------------
T ss_pred             ccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCcc---------------
Confidence            99999999999999999999999999999999999998644      455555554422121110               


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                             .....+.++.+||.+||++||.+|||++|+|+||||++
T Consensus       251 -----------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         251 -----------------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             -----------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             -----------------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence                                   11344567889999999999999999999999999973

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.6e-36  Score=234.56  Aligned_cols=167  Identities=22%  Similarity=0.258  Sum_probs=125.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-CCCCCCcCCccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-HFTEDVQTRQYR   77 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y~   77 (214)
                      +|++++.....+.+.+++..+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|+.... .....+||+.|+
T Consensus        93 ~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~  172 (364)
T d1omwa3          93 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM  172 (364)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGC
T ss_pred             cHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccc
Confidence            5677777777766666644221  222  37777789999999999999999999999999987754 345568999999


Q ss_pred             chHHHhc-CCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         78 SLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        78 aPE~~~~-~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      |||++.+ ..|+.++||||+||++|+|++|..||.+.+..    ....   +.+.....                     
T Consensus       173 APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~---~~~~~~~~---------------------  224 (364)
T d1omwa3         173 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHE---IDRMTLTM---------------------  224 (364)
T ss_dssp             CHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS----CHHH---HHHHSSSC---------------------
T ss_pred             hhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH----HHHH---HHHhcccC---------------------
Confidence            9999975 46999999999999999999999999754321    1111   11110000                     


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRAT-----AADCLQHPWLQN  214 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t-----~~e~l~hp~f~~  214 (214)
                                       ....+...++++.+||.+||+.||++|||     |+|+++||||++
T Consensus       225 -----------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         225 -----------------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             -----------------CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             -----------------CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence                             00123345667899999999999999999     799999999974

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=227.17  Aligned_cols=168  Identities=22%  Similarity=0.330  Sum_probs=129.7

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCc----ceEEeecCCceeccC--CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPF----LFDIGTYRNACWVDK--HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~----~~kl~Dfg~a~~~~~--~~~~~~~   72 (214)
                      +|.+++.+.+.+....++..+.  +..  .+|.++++|||+||+||++..++    .+|++|||+|+....  ......|
T Consensus        99 ~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~  178 (293)
T d1jksa_          99 ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG  178 (293)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCC
T ss_pred             cccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCC
Confidence            6777877777777777754322  222  36777789999999999998766    599999999987753  3455689


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+..|+.++||||+||++++|++|..||.+.+      ..+.+..+.+.-..++...             
T Consensus       179 t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~-------------  239 (293)
T d1jksa_         179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYEFEDEY-------------  239 (293)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHTTCCCCCHHH-------------
T ss_pred             CCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC------HHHHHHHHHhcCCCCCchh-------------
Confidence            999999999999899999999999999999999999998644      4455554433211111111             


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                               +...+..+.+||.+||+.||++|||++|+|+||||+.
T Consensus       240 -------------------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         240 -------------------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             -------------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred             -------------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                                     1234567789999999999999999999999999974

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-35  Score=231.44  Aligned_cols=186  Identities=22%  Similarity=0.339  Sum_probs=136.6

Q ss_pred             ccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCc-ceEEeecCCceecc--CCCCCCCcCCcccchHHH
Q psy16751         10 AFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPF-LFDIGTYRNACWVD--KHFTEDVQTRQYRSLEVL   82 (214)
Q Consensus        10 ~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~-~~kl~Dfg~a~~~~--~~~~~~~~~~~y~aPE~~   82 (214)
                      ....+.+.+++...+  +..  .+|.++++|||+||+||+++.++ .+||+|||+|+...  ......+||+.|+|||.+
T Consensus       115 ~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  194 (350)
T d1q5ka_         115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI  194 (350)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHh
Confidence            344455555543222  222  37777889999999999998765 89999999998764  345567899999999999


Q ss_pred             hcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCC
Q psy16751         83 INA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPG  161 (214)
Q Consensus        83 ~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (214)
                      .+. .|+.++||||+||+++||++|.+||...+      ..+++..+.+..|.++.+............       ..+.
T Consensus       195 ~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~-------~~~~  261 (350)
T d1q5ka_         195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS------GVDQLVEIIKVLGTPTREQIREMNPNYTEF-------KFPQ  261 (350)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCC---CC-------CCCC
T ss_pred             hcccCCCcceeecccceEEEehhhCCCCCCCCC------HHHHHHHHHHHhCCChHHhhhhhccchhhc-------cccc
Confidence            875 68999999999999999999999998655      688999999999998887664432221100       0111


Q ss_pred             CCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        162 LKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ........      ......++++.+||.+||++||++||||.|+|+||||++
T Consensus       262 ~~~~~~~~------~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         262 IKAHPWTK------VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             CCCCCGGG------TSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             cccCchhh------hcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            11111110      112345567899999999999999999999999999963

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.5e-35  Score=225.89  Aligned_cols=168  Identities=22%  Similarity=0.362  Sum_probs=124.6

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|||+||+||+++.++.+|++|||.|......   ....+|++.|+|||.+.+. .++.++||||+||++++|
T Consensus       115 ~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el  194 (286)
T d1ob3a_         115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM  194 (286)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             HhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHH
Confidence            377778899999999999999999999999999876543   3445789999999999876 478999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|+.||.+.+      +.+++.++.+..|.++................   ....   ......       ......+.
T Consensus       195 ~~G~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~-------~~~~~~s~  255 (286)
T d1ob3a_         195 VNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYDPN---FTVY---EPLPWE-------SFLKGLDE  255 (286)
T ss_dssp             HHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT---CCCC---CCCCGG-------GTCCSCCH
T ss_pred             HHCCCCCCCCC------HHHHHHHHHHhhCCCChhhccchhhhhhcccc---cccc---cCcchh-------hhcccCCH
Confidence            99999997654      67888889888888776544322221111000   0000   000000       01234456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ++.||+.+||++||++||||+|+|+||||++
T Consensus       256 ~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         256 SGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            7889999999999999999999999999985

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-36  Score=226.06  Aligned_cols=132  Identities=20%  Similarity=0.286  Sum_probs=99.0

Q ss_pred             cccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCC
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF  110 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f  110 (214)
                      ++|||+||+||+++.++.+||+|||+|+....   ..+..+||+.|+|||++.+.+|+.++||||+||++++|++|..||
T Consensus       135 IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf  214 (269)
T d2java1         135 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF  214 (269)
T ss_dssp             -----CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             EEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCC
Confidence            79999999999999999999999999987643   234568999999999999989999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHH
Q psy16751        111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR  190 (214)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  190 (214)
                      .+.+      ..+....+..  +..+                                       ..+...+.++.+||.
T Consensus       215 ~~~~------~~~~~~~i~~--~~~~---------------------------------------~~~~~~s~~l~~li~  247 (269)
T d2java1         215 TAFS------QKELAGKIRE--GKFR---------------------------------------RIPYRYSDELNEIIT  247 (269)
T ss_dssp             CCSS------HHHHHHHHHH--TCCC---------------------------------------CCCTTSCHHHHHHHH
T ss_pred             CCCC------HHHHHHHHHc--CCCC---------------------------------------CCCcccCHHHHHHHH
Confidence            7543      3333333322  1110                                       012334567889999


Q ss_pred             HccccCCCCCCCHHHHhcCCCC
Q psy16751        191 PMLAYDPKLRATAADCLQHPWL  212 (214)
Q Consensus       191 ~~l~~dp~~R~t~~e~l~hp~f  212 (214)
                      +||+.||++|||++|+|+|||.
T Consensus       248 ~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         248 RMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHcCCChhHCcCHHHHHhCCcC
Confidence            9999999999999999999995

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-35  Score=228.17  Aligned_cols=170  Identities=18%  Similarity=0.256  Sum_probs=126.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC-------CCCCCCcCCcccchHHHhcC-CCCcchhhHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------HFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMA  100 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l  100 (214)
                      +|..+++|||+||+||+++.++.+||+|||+|+....       .....+||+.|+|||++.+. .|+.++||||+||++
T Consensus       133 lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil  212 (318)
T d3blha1         133 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM  212 (318)
T ss_dssp             HHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             hccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCcee
Confidence            6677789999999999999999999999999986642       23345799999999999876 689999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChh
Q psy16751        101 FELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE  180 (214)
Q Consensus       101 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (214)
                      ++|++|++||.+.+      +.+.+..+.+..+.++.+...............     ............+..     ..
T Consensus       213 ~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~  276 (318)
T d3blha1         213 AEMWTRSPIMQGNT------EQHQLALISQLCGSITPEVWPNVDNYELYEKLE-----LVKGQKRKVKDRLKA-----YV  276 (318)
T ss_dssp             HHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTCCCC------------CCSSCCBCHHHHHHH-----HH
T ss_pred             eeHhhCCCCCCCCC------HHHHHHHHHHhcCCCChhhccccchhhhhhhhc-----ccccccccchhhhcc-----cc
Confidence            99999999998654      688888899999988776544333222111100     001111111111111     12


Q ss_pred             hHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       181 ~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .++.++|||.+||++||++|+||+|+|+||||++
T Consensus       277 ~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         277 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             CCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             CCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            2457789999999999999999999999999974

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.5e-36  Score=228.83  Aligned_cols=163  Identities=20%  Similarity=0.213  Sum_probs=122.5

Q ss_pred             chhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccch
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSL   79 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aP   79 (214)
                      |..+....+.+...++.....  +..  .+|.++++|||+||+||+++.++.+||+|||+|...... ...+||+.|+||
T Consensus       102 l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-~~~~GT~~Y~AP  180 (309)
T d1u5ra_         102 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSFVGTPYWMAP  180 (309)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCCCSCGGGCCH
T ss_pred             hHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC-CccccCccccCH
Confidence            334455556666666543221  222  267777899999999999999999999999999866543 456899999999


Q ss_pred             HHHhcC---CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCcc
Q psy16751         80 EVLINA---GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL  156 (214)
Q Consensus        80 E~~~~~---~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  156 (214)
                      |++.+.   +|+.++||||+||++++|++|..||.+.+      ..+.+.++...  ..+.                   
T Consensus       181 E~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~------~~~~~~~i~~~--~~~~-------------------  233 (309)
T d1u5ra_         181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQN--ESPA-------------------  233 (309)
T ss_dssp             HHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS--CCCC-------------------
T ss_pred             HHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhC--CCCC-------------------
Confidence            999753   58999999999999999999999997544      34444444321  1100                   


Q ss_pred             ccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        157 RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                         ..+...+..+.+||.+||+.||++|||++|+|+||||+
T Consensus       234 -------------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~  271 (309)
T d1u5ra_         234 -------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (309)
T ss_dssp             -------------------CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             -------------------CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhc
Confidence                               01123456788999999999999999999999999985

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-36  Score=225.94  Aligned_cols=158  Identities=22%  Similarity=0.394  Sum_probs=120.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCC-CcceEEeecCCceeccC-CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLP-PFLFDIGTYRNACWVDK-HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~-~~~~kl~Dfg~a~~~~~-~~~~~~~~~~y   76 (214)
                      ++++++.+...+.+..++..+.  ++  ..+|..+++|||+||+||+++. ++.+||+|||+|+.... .....+||+.|
T Consensus        96 ~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y  175 (273)
T d1xwsa_          96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY  175 (273)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGG
T ss_pred             hHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCc
Confidence            3456666666777766644222  22  2377777899999999999975 57999999999987654 34567899999


Q ss_pred             cchHHHhcCCC-CcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAGY-DCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~~-~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+.++ +.++||||+||++++|++|..||.+         ...   +.+  +.                     
T Consensus       176 ~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~---------~~~---i~~--~~---------------------  220 (273)
T d1xwsa_         176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------DEE---IIR--GQ---------------------  220 (273)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS---------HHH---HHH--CC---------------------
T ss_pred             CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC---------chH---Hhh--cc---------------------
Confidence            99999998875 5789999999999999999999963         111   111  00                     


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                         ...+...+.++.+||.+||+.||++|||++|+|+||||++
T Consensus       221 -------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  260 (273)
T d1xwsa_         221 -------------------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD  260 (273)
T ss_dssp             -------------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             -------------------cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence                               0012334567889999999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=221.82  Aligned_cols=167  Identities=25%  Similarity=0.411  Sum_probs=126.9

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCcccchHHHhcCC-CCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~~l~  104 (214)
                      +|..+++|||+||+||+++.++.+||+|||.|+....   .....+||+.|+|||++...+ ++.++||||+||++++|+
T Consensus       118 LH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~  197 (298)
T d1gz8a_         118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV  197 (298)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHh
Confidence            6777789999999999999999999999999987643   344558999999999998876 578999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||.+.+      ..+++.++.+..|.+..............      ....+..........       ....+.+
T Consensus       198 ~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-------~~~~s~~  258 (298)
T d1gz8a_         198 TRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSMPDY------KPSFPKWARQDFSKV-------VPPLDED  258 (298)
T ss_dssp             HSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTC------CTTSCCCCCCCHHHH-------STTCCHH
T ss_pred             hCCCCCCCCC------HHHHHHHHHHhcCCCchhhcccccccccc------ccccccccccchhhh-------ccCCCHH
Confidence            9999998655      68888888888888765443322111110      011111111111111       1244567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      +.+||.+||++||++|||++|+|+||||++
T Consensus       259 ~~dll~~mL~~dP~~R~t~~ell~H~ff~~  288 (298)
T d1gz8a_         259 GRSLLSQMLHYDPNKRISAKAALAHPFFQD  288 (298)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHccCChhHCcCHHHHhCCHhhcc
Confidence            899999999999999999999999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-35  Score=225.44  Aligned_cols=164  Identities=15%  Similarity=0.165  Sum_probs=127.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC---CCCCCCcCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK---HFTEDVQTRQ   75 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~~   75 (214)
                      +|.+++....++.+..++....  +..  .+|.++++|||+||+||+++.++.+||+|||+|+....   ......||+.
T Consensus        89 ~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~  168 (320)
T d1xjda_          89 DLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPD  168 (320)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGG
T ss_pred             cHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCC
Confidence            6777777777776666544211  222  37777789999999999999999999999999986542   3445689999


Q ss_pred             ccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         76 YRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        76 y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      |+|||++.+.+|+.++||||+||++++|++|..||.+.+      ..+.+..+..  +.+                    
T Consensus       169 y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~--~~~--------------------  220 (320)
T d1xjda_         169 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIRM--DNP--------------------  220 (320)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--CCC--------------------
T ss_pred             cCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHHc--CCC--------------------
Confidence            999999999999999999999999999999999997544      3344433322  111                    


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHH-HHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAA-DCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~-e~l~hp~f~~  214 (214)
                                          ..+...++++.+||.+||+.||++|||+. ++++||||++
T Consensus       221 --------------------~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         221 --------------------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             --------------------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             --------------------CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence                                12234456789999999999999999995 8999999974

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.6e-34  Score=218.81  Aligned_cols=168  Identities=18%  Similarity=0.284  Sum_probs=130.6

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQY   76 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y   76 (214)
                      +|++++.+...+...+++....  ++.  .+|..+++|+|+||+||+++.++.+||+|||+|+....  .....+||+.|
T Consensus        96 ~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y  175 (277)
T d1phka_          96 ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY  175 (277)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGG
T ss_pred             hHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCC
Confidence            7888888888888777765332  333  36777779999999999999999999999999987754  34556899999


Q ss_pred             cchHHHhcC------CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         77 RSLEVLINA------GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        77 ~aPE~~~~~------~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      +|||.+.+.      .++.++||||+||++++|++|+.||.+.+      .......+...--.++.             
T Consensus       176 ~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~------~~~~~~~i~~~~~~~~~-------------  236 (277)
T d1phka_         176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQFGS-------------  236 (277)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCT-------------
T ss_pred             CCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC------HHHHHHHHHhCCCCCCC-------------
Confidence            999999853      46789999999999999999999998544      34444444331101000             


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                                               ......++++++|+.+||+.||++|||++|||+||||++
T Consensus       237 -------------------------~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         237 -------------------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             -------------------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             -------------------------cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence                                     011345668899999999999999999999999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-34  Score=221.05  Aligned_cols=194  Identities=24%  Similarity=0.368  Sum_probs=138.0

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC------CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK------HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~------~~~~~~~   72 (214)
                      +|++++. ..++...+++..+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|.....      .....+|
T Consensus        96 ~L~~~l~-~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~g  174 (345)
T d1pmea_          96 DLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA  174 (345)
T ss_dssp             EHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCS
T ss_pred             chhhhhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccc
Confidence            4666654 44677766654322  333  37777789999999999999999999999999986632      2345689


Q ss_pred             CCcccchHHHhcC-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         73 TRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        73 ~~~y~aPE~~~~~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      |+.|+|||++... .++.++||||+||++++|++|..||.+.+      ..++...+....+.+..............  
T Consensus       175 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  246 (345)
T d1pmea_         175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH------YLDQLNHILGILGSPSQEDLNCIINLKAR--  246 (345)
T ss_dssp             CGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHTCCCHHHH--
T ss_pred             cceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCC------HHHHHHHHhhhccCCChhhhhhhhhhhhh--
Confidence            9999999998654 68899999999999999999999997655      67778888888888776654332221110  


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                        ......+..........       ....+.++++|+.+||++||++||||+|+|+||||++
T Consensus       247 --~~~~~~~~~~~~~~~~~-------~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~  300 (345)
T d1pmea_         247 --NYLLSLPHKNKVPWNRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  300 (345)
T ss_dssp             --HHHHTSCCCCCCCHHHH-------CTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             --cccccCCccCCCCHHHh-------CCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence              00000111111111110       1234557889999999999999999999999999973

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=4.8e-34  Score=221.49  Aligned_cols=193  Identities=19%  Similarity=0.256  Sum_probs=130.7

Q ss_pred             CchhhhhHHHHHH--hh--hcccccccccccccccccccCCC-cceEEeecCCceeccC--CCCCCCcCCcccchHHHhc
Q psy16751         12 GSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPP-FLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLIN   84 (214)
Q Consensus        12 ~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~-~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~   84 (214)
                      +.+.+.+++....  +.  +.+|.++++|||+||+||+++.+ +.+||+|||+|+....  .....++|+.|+|||.+.+
T Consensus       124 ~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD  203 (328)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccC
Confidence            3455666644322  22  24777888999999999999764 5799999999987753  4556689999999999998


Q ss_pred             C-CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCC
Q psy16751         85 A-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLK  163 (214)
Q Consensus        85 ~-~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (214)
                      . .|+.++||||+||+++++++|..||.....     ...+...+.+.+|.+.................    .......
T Consensus       204 ~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~-----~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~  274 (328)
T d3bqca1         204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-----NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF----NDILGRH  274 (328)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS-----HHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG----GGTCCCC
T ss_pred             CCCCCcccchhhhhhhhHHhccCCCCCCCCch-----hHHHHHHHHHHHCCchhhhhhhhcccccCccc----chhcccc
Confidence            6 489999999999999999999999975432     56777778887776433322211111100000    0000000


Q ss_pred             CCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        164 PWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      ........ .........++++.|||.+||++||++||||+|||+||||++
T Consensus       275 ~~~~~~~~-~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~  324 (328)
T d3bqca1         275 SRKRWERF-VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  324 (328)
T ss_dssp             CCCCGGGG-CCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cccchhhc-ccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            00000000 001122345677899999999999999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-33  Score=214.73  Aligned_cols=193  Identities=23%  Similarity=0.332  Sum_probs=134.3

Q ss_pred             chhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCC---CCCCCcCCcc
Q psy16751          4 IFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH---FTEDVQTRQY   76 (214)
Q Consensus         4 l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~y   76 (214)
                      +..++...+.+....+.....  ++  ..+|.++++|||+||+||++..++.+||+|||.|+.....   .....+++.|
T Consensus        88 l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~  167 (292)
T d1unla_          88 KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWY  167 (292)
T ss_dssp             HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGG
T ss_pred             cccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccch
Confidence            344444455555454433211  22  2377778899999999999999999999999999987543   3344678889


Q ss_pred             cchHHHhcCC-CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCc
Q psy16751         77 RSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGE  155 (214)
Q Consensus        77 ~aPE~~~~~~-~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  155 (214)
                      +|||++.+.. ++.++||||+||++++|++|..||....+     ..+++.++....+.+................... 
T Consensus       168 ~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (292)
T d1unla_         168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM-  241 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-----HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC-
T ss_pred             hhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC-----HHHHHHHHHhhcCCCChhhhhhhhhccccccccc-
Confidence            9999998775 68999999999999999999988754332     6777888888888876644332222111110000 


Q ss_pred             cccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        156 LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                         .+...         .........++.+.+||.+||++||++||||+|+|+||||++
T Consensus       242 ---~~~~~---------~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         242 ---YPATT---------SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             ---CCTTC---------CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             ---ccccc---------hhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence               00000         011123445567899999999999999999999999999975

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-34  Score=225.22  Aligned_cols=174  Identities=23%  Similarity=0.347  Sum_probs=121.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccC--CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK--HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT  105 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~  105 (214)
                      .+|..+++|||+||.||++..++.+|++|||.++....  .....+||+.|+|||++.+..++.++||||+||+++++++
T Consensus       134 ~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~  213 (355)
T d2b1pa1         134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR  213 (355)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HhhhcccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhh
Confidence            36777789999999999999999999999999887653  3445689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc-ccccccCccccCCCCCCCchhhHHHhhc-----CCCh
Q psy16751        106 GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKKGELRHIPGLKPWDLYSVLVEKY-----NWTP  179 (214)
Q Consensus       106 g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  179 (214)
                      |.+||.+.+      ...+..++.+..+.++........... ......      +...............     ....
T Consensus       214 g~~pF~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  281 (355)
T d2b1pa1         214 HKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR------PKYAGLTFPKLFPDSLFPADSEHNK  281 (355)
T ss_dssp             SSCSSCCSS------HHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTS------CCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred             CCCCCCCCC------HHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcC------ccccccccccccccccccccccccc
Confidence            999998655      688888888888887776554332211 111100      0000001000000000     0113


Q ss_pred             hhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        180 ESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       180 ~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                      ..+.++.+||.+||++||++||||+|||+||||+
T Consensus       282 ~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~  315 (355)
T d2b1pa1         282 LKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  315 (355)
T ss_dssp             HHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence            4467889999999999999999999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-34  Score=222.52  Aligned_cols=167  Identities=19%  Similarity=0.243  Sum_probs=127.8

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hhh--cccccccccccccccccccCC--CcceEEeecCCceeccCC--CCCCCcC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLP--PFLFDIGTYRNACWVDKH--FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~--~~~~kl~Dfg~a~~~~~~--~~~~~~~   73 (214)
                      +|++++...+ .+.+..++..+.  +..  .+|.++++|||+||+||+++.  ...+||+|||+++.....  ....++|
T Consensus        87 ~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t  166 (321)
T d1tkia_          87 DIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA  166 (321)
T ss_dssp             BHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESC
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccc
Confidence            6778777665 466666644222  222  377778899999999999875  458999999999876432  3445889


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKK  153 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  153 (214)
                      +.|+|||.+.+..|+.++||||+||++++|++|..||.+.+      ..+.+..+.+....++....             
T Consensus       167 ~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~-------------  227 (321)
T d1tkia_         167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYTFDEEAF-------------  227 (321)
T ss_dssp             GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCCCHHHH-------------
T ss_pred             cccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCChhhc-------------
Confidence            99999999999899999999999999999999999998654      45555555543222222111             


Q ss_pred             CccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        154 GELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                                               ...+.++.+||.+||+.||++|||++|+|+||||+
T Consensus       228 -------------------------~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~  262 (321)
T d1tkia_         228 -------------------------KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             -------------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             -------------------------cCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence                                     23455678999999999999999999999999985

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-33  Score=220.81  Aligned_cols=194  Identities=24%  Similarity=0.329  Sum_probs=140.4

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hh--hcccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IR--NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRS   78 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~--~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~a   78 (214)
                      +|.+++ +.+++....++..+.  +.  ..+|.++++|||+||+||+++.++.+|++|||.|...........|++.|+|
T Consensus       108 ~L~~~~-~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~a  186 (348)
T d2gfsa1         108 DLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA  186 (348)
T ss_dssp             EHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSC
T ss_pred             chhhhc-ccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccccccC
Confidence            456655 445677777655322  22  2377778899999999999999999999999999888777778899999999


Q ss_pred             hHHHhcCC-CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccc
Q psy16751         79 LEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELR  157 (214)
Q Consensus        79 PE~~~~~~-~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  157 (214)
                      ||.+.+.. ++.++||||+||++++|++|.+||.+.+      .......+.+..+.++.+.............    ..
T Consensus       187 pE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~  256 (348)
T d2gfsa1         187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESARNY----IQ  256 (348)
T ss_dssp             HHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH----HT
T ss_pred             chhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhccchhhhhh----hh
Confidence            99988875 6889999999999999999999998655      6788888888888887776543322211100    00


Q ss_pred             cCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q psy16751        158 HIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN  214 (214)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~~  214 (214)
                      .............       ....+++++|||.+||++||++||||+|+|+||||++
T Consensus       257 ~~~~~~~~~~~~~-------~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         257 SLTQMPKMNFANV-------FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             TSCCCCCCCHHHH-------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hcccCCCcchhhh-------cCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCC
Confidence            0111111111111       1234567889999999999999999999999999974

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-35  Score=226.45  Aligned_cols=171  Identities=19%  Similarity=0.217  Sum_probs=122.0

Q ss_pred             cchhhhhccC--chhhhhHHHHHH--hhh--cccccccccccccccccccCC---CcceEEeecCCceeccC--CCCCCC
Q psy16751          3 SIFNFFVAFG--SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDK--HFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~--~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~--~~~~~~   71 (214)
                      +|++++....  .+.+.+++..+.  +..  .+|..+++|||+||+||++..   .+.+||+|||+|+....  .....+
T Consensus        95 ~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~  174 (335)
T d2ozaa1          95 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC  174 (335)
T ss_dssp             EHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCS
T ss_pred             cHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCcccccc
Confidence            6788887643  466666644322  222  377777899999999999875   56799999999987643  345568


Q ss_pred             cCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         72 QTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        72 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      ||+.|+|||++.+..|+.++||||+||++++|++|.+||.+.+..      .....+...           .......  
T Consensus       175 gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~------~~~~~~~~~-----------i~~~~~~--  235 (335)
T d2ozaa1         175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL------AISPGMKTR-----------IRMGQYE--  235 (335)
T ss_dssp             CCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------C-----------CCSCSSS--
T ss_pred             CCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH------HHHHHHHHH-----------HhcCCCC--
Confidence            999999999999989999999999999999999999999754321      111111000           0000000  


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ  213 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~hp~f~  213 (214)
                             .    +..          .....+.++.+||.+||++||++|||+.|+|+||||+
T Consensus       236 -------~----~~~----------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         236 -------F----PNP----------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             -------C----CTT----------HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             -------C----CCc----------ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence                   0    000          0123456789999999999999999999999999985

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=7.5e-33  Score=209.53  Aligned_cols=164  Identities=12%  Similarity=0.188  Sum_probs=116.2

Q ss_pred             cchhhhhccCc-hhhhhHHHHHH---hhh--cccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCC
Q psy16751          3 SIFNFFVAFGS-LEETDKKRRLY---IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~~-~~~~d~k~~~~---~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~   71 (214)
                      +|++++...+. +....+.. +.   +..  .+|.++++|||+||+||+++.++.+||+|||+|+....     ......
T Consensus        89 ~L~~~l~~~~~~~~~~~~~~-i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~  167 (276)
T d1uwha_          89 SLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS  167 (276)
T ss_dssp             EHHHHHHTSCCCCCHHHHHH-HHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CC
T ss_pred             CHHHHHhhccCCCCHHHHHH-HHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccc
Confidence            57777765443 44444322 22   122  36777889999999999999999999999999987642     234458


Q ss_pred             cCCcccchHHHhcC---CCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccc
Q psy16751         72 QTRQYRSLEVLINA---GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE  148 (214)
Q Consensus        72 ~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  148 (214)
                      ||+.|+|||++.+.   +|+.++||||+||+++||++|..||.+.+      ...++..........|. .         
T Consensus       168 gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~------~~~~~~~~~~~~~~~p~-~---------  231 (276)
T d1uwha_         168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN------NRDQIIFMVGRGYLSPD-L---------  231 (276)
T ss_dssp             CCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHHTSCCCC-G---------
T ss_pred             cCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcCCCCCc-c---------
Confidence            99999999999754   48999999999999999999999997544      34444444332111110 0         


Q ss_pred             cccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                                                ...+..++.++.+|+.+||..||++|||++|++++
T Consensus       232 --------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         232 --------------------------SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             --------------------------GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------------hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                                      00224456678999999999999999999999875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.2e-33  Score=214.09  Aligned_cols=135  Identities=12%  Similarity=0.122  Sum_probs=107.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC-----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF-----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.++++|||+||+||+++.++.+||+|||+|+......     ....||+.|+|||++.+..|+.++||||+||+++||
T Consensus       180 LH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~em  259 (325)
T d1rjba_         180 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI  259 (325)
T ss_dssp             HHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHH
Confidence            677788999999999999999999999999998764332     234679999999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |.+||.+.+      ....+..+.+.-..+                                        ..+..++
T Consensus       260 lt~g~~Pf~~~~------~~~~~~~~~~~~~~~----------------------------------------~~p~~~~  293 (325)
T d1rjba_         260 FSLGVNPYPGIP------VDANFYKLIQNGFKM----------------------------------------DQPFYAT  293 (325)
T ss_dssp             TTTSCCSSTTCC------CSHHHHHHHHTTCCC----------------------------------------CCCTTCC
T ss_pred             HhCCCCCCCCCC------HHHHHHHHHhcCCCC----------------------------------------CCCCcCC
Confidence            97 899997544      233444433210000                                        1234455


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .++.+||.+||+.||++|||++|+++|
T Consensus       294 ~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         294 EEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            678999999999999999999999875

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-32  Score=210.62  Aligned_cols=168  Identities=14%  Similarity=0.162  Sum_probs=122.5

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC----CCCCCCcCC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK----HFTEDVQTR   74 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~   74 (214)
                      +|.+++.....+...+++..+.  +..  .+|..+++|||+||+||+++.++.+||+|||+|+....    ......|++
T Consensus       115 ~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~  194 (322)
T d1vzoa_         115 ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI  194 (322)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCC
T ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhccccccccccccccc
Confidence            5666666666655555543221  222  36777789999999999999999999999999987643    233457999


Q ss_pred             cccchHHHhcCC--CCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         75 QYRSLEVLINAG--YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        75 ~y~aPE~~~~~~--~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      .|++||.+.+..  ++.++||||+||++++|++|..||.+.+...   ....+...... +.                  
T Consensus       195 ~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~---~~~~i~~~~~~-~~------------------  252 (322)
T d1vzoa_         195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAEISRRILK-SE------------------  252 (322)
T ss_dssp             TTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC---CHHHHHHHHHH-CC------------------
T ss_pred             ccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhccc-CC------------------
Confidence            999999998763  6789999999999999999999997544211   22322222110 11                  


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-----TAADCLQHPWLQN  214 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----t~~e~l~hp~f~~  214 (214)
                                            ...+...+.++.+||.+||++||.+|+     ||+|+|+||||++
T Consensus       253 ----------------------~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         253 ----------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             ----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             ----------------------CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence                                  112344567889999999999999999     5899999999974

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-32  Score=206.68  Aligned_cols=136  Identities=13%  Similarity=0.134  Sum_probs=100.8

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|||+||+||+++.++.+||+|||+|+.....     ....+||+.|+|||++.+..++.++||||+||+++|
T Consensus       149 ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~e  228 (299)
T d1ywna1         149 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  228 (299)
T ss_dssp             HHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHH
Confidence            367778899999999999999999999999999866422     234579999999999999999999999999999999


Q ss_pred             HhhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LATG-DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |+++ .+||.+.+      ..+.+...... |..+                                       ..+...
T Consensus       229 llt~~~~p~~~~~------~~~~~~~~~~~-~~~~---------------------------------------~~~~~~  262 (299)
T d1ywna1         229 IFSLGASPYPGVK------IDEEFCRRLKE-GTRM---------------------------------------RAPDYT  262 (299)
T ss_dssp             HHTTSCCSSTTCC------CSHHHHHHHHH-TCCC---------------------------------------CCCTTC
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHhc-CCCC---------------------------------------CCCccC
Confidence            9986 46776433      22333333322 1100                                       123445


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ++++.+|+.+||+.||++|||++|+++|
T Consensus       263 ~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         263 TPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            5678999999999999999999999986

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.5e-32  Score=202.87  Aligned_cols=160  Identities=12%  Similarity=0.140  Sum_probs=106.5

Q ss_pred             cchhhhhccCchhhhhHHHHHHhh-----hcccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcC
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLYIR-----NACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQT   73 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~~~-----~~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~   73 (214)
                      +|.+++.........+....+..+     ..+|.+.++|||+||+||+++.++.+||+|||+|+.....    .....||
T Consensus        86 ~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt  165 (263)
T d1sm2a_          86 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP  165 (263)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------C
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecC
Confidence            566766655444333332222211     1367777899999999999999999999999999876432    2235789


Q ss_pred             CcccchHHHhcCCCCcchhhHHHHHHHHHHhhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         74 RQYRSLEVLINAGYDCSADIWSVACMAFELATG-DYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        74 ~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      +.|+|||++.+..|+.++||||+||+++|++++ .++|...+      ..+.+..+..  +..+                
T Consensus       166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~------~~~~~~~i~~--~~~~----------------  221 (263)
T d1sm2a_         166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDIST--GFRL----------------  221 (263)
T ss_dssp             TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC------HHHHHHHHHH--TCCC----------------
T ss_pred             cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC------HHHHHHHHHh--cCCC----------------
Confidence            999999999999999999999999999999995 55554322      2333333322  1100                


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                                             ..+..++.++.+|+.+||+.||++|||++|+++|
T Consensus       222 -----------------------~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         222 -----------------------YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             -----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------CCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                                   0123445678899999999999999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.1e-32  Score=205.63  Aligned_cols=163  Identities=11%  Similarity=0.159  Sum_probs=119.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~   72 (214)
                      +|.+++.....+...++.....  +..  .+|.++++|||+||+||+++.++.+||+|||+|+.....      .....|
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~g  172 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  172 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CC
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCC
Confidence            5677777777666655543211  222  367777899999999999999999999999999876432      223478


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT  151 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  151 (214)
                      |+.|+|||++.+..++.++||||+||+++|+++ |..||.+.+      ..+....+.+  |..                
T Consensus       173 t~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~------~~~~~~~i~~--~~~----------------  228 (277)
T d1xbba_         173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--GER----------------  228 (277)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TCC----------------
T ss_pred             CceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC------HHHHHHHHHc--CCC----------------
Confidence            899999999999999999999999999999997 899997533      2222222211  110                


Q ss_pred             ccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHH---hcCCCC
Q psy16751        152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC---LQHPWL  212 (214)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~---l~hp~f  212 (214)
                                             ...+..++.++.+|+.+||+.||++|||++++   |+|+|+
T Consensus       229 -----------------------~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         229 -----------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             -----------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -----------------------CCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence                                   01234456678899999999999999999998   456654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.2e-31  Score=203.64  Aligned_cols=158  Identities=9%  Similarity=0.131  Sum_probs=105.6

Q ss_pred             cchhhhhccCc-hhhhhHHHHHH---hhh--cccccccccccccccccccCCCcceEEeecCCceeccCCC--------C
Q psy16751          3 SIFNFFVAFGS-LEETDKKRRLY---IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF--------T   68 (214)
Q Consensus         3 ~l~~~~~~~~~-~~~~d~k~~~~---~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~--------~   68 (214)
                      +|.+++.+..+ +...++.. +.   +..  .+|.++++|||+||+||+++.++.+||+|||+|+......        .
T Consensus       113 ~L~~~~~~~~~~l~~~~~~~-i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~  191 (299)
T d1jpaa_         113 SLDSFLRQNDGQFTVIQLVG-MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL  191 (299)
T ss_dssp             EHHHHHHTTTTCSCHHHHHH-HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------------
T ss_pred             cceeeeccccCCCCHHHHHH-HHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecc
Confidence            45566655443 44444422 22   122  3677778999999999999999999999999998764321        1


Q ss_pred             CCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCcc
Q psy16751         69 EDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS  147 (214)
Q Consensus        69 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  147 (214)
                      ...||+.|+|||.+.+..|+.++||||+||+++|+++ |..||.+.+      ..+.+..+.+. ..+            
T Consensus       192 ~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~------~~~~~~~i~~~-~~~------------  252 (299)
T d1jpaa_         192 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT------NQDVINAIEQD-YRL------------  252 (299)
T ss_dssp             ----CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTT-CCC------------
T ss_pred             cccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-CCC------------
Confidence            2357889999999999999999999999999999997 899997543      33333332210 000            


Q ss_pred             ccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        148 EFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                                                  ..+..++..+.+|+.+||+.||++|||+.|+++
T Consensus       253 ----------------------------~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~  285 (299)
T d1jpaa_         253 ----------------------------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN  285 (299)
T ss_dssp             ----------------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------------------------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                                        112345567889999999999999999988764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.7e-32  Score=205.09  Aligned_cols=163  Identities=12%  Similarity=0.154  Sum_probs=118.6

Q ss_pred             cchhhhhccC-chhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCC
Q psy16751          3 SIFNFFVAFG-SLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDV   71 (214)
Q Consensus         3 ~l~~~~~~~~-~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~   71 (214)
                      +|.+++.... .+...++...+.  +..  .+|.++++|||+||+||+++.++.+||+|||+|+.....      .....
T Consensus        94 ~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~  173 (285)
T d1u59a_          94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK  173 (285)
T ss_dssp             EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSC
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccc
Confidence            5667765543 444444432211  111  267778899999999999999999999999999877432      23446


Q ss_pred             cCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccc
Q psy16751         72 QTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF  150 (214)
Q Consensus        72 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (214)
                      ||+.|+|||++.+..++.++||||+||+++|+++ |..||.+.+      ..+....+.+  |..+              
T Consensus       174 gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~------~~~~~~~i~~--~~~~--------------  231 (285)
T d1u59a_         174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------GPEVMAFIEQ--GKRM--------------  231 (285)
T ss_dssp             CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------THHHHHHHHT--TCCC--------------
T ss_pred             cCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CCCC--------------
Confidence            8889999999999899999999999999999997 899997543      2333333221  1100              


Q ss_pred             cccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCCCHHHH---hcCCCC
Q psy16751        151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC---LQHPWL  212 (214)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~---l~hp~f  212 (214)
                                               ..+..++.++.+||.+||..||++|||+.++   |+|+|+
T Consensus       232 -------------------------~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         232 -------------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             -------------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -------------------------CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence                                     1234556678899999999999999999887   456554

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-31  Score=200.41  Aligned_cols=137  Identities=10%  Similarity=0.130  Sum_probs=105.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|||+||+||+++.++.+||+|||+|+.....    .....||+.|+|||++.+..|+.++||||+||+++|++
T Consensus       125 lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ell  204 (272)
T d1qpca_         125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV  204 (272)
T ss_dssp             HHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             HHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHH
Confidence            67777899999999999999999999999999877532    23457889999999999888999999999999999999


Q ss_pred             hCCC-CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 TGDY-LFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~g~~-~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      +|.. +|...+      ..+.+..+..  +..                                       ...+..++.
T Consensus       205 t~~~~~~~~~~------~~~~~~~i~~--~~~---------------------------------------~~~p~~~~~  237 (272)
T d1qpca_         205 THGRIPYPGMT------NPEVIQNLER--GYR---------------------------------------MVRPDNCPE  237 (272)
T ss_dssp             TTTCCSSTTCC------HHHHHHHHHT--TCC---------------------------------------CCCCTTCCH
T ss_pred             hCCCCCCCCCC------HHHHHHHHHh--cCC---------------------------------------CCCcccChH
Confidence            9654 444322      2233322211  000                                       011234556


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc--CCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ--HPWL  212 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~--hp~f  212 (214)
                      ++.+|+.+||+.||++|||++++++  |+||
T Consensus       238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            7889999999999999999999987  6766

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=195.69  Aligned_cols=134  Identities=13%  Similarity=0.194  Sum_probs=106.1

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|+|+|++||+++.++.+||+|||+|+...+.    .....||+.|+|||.+.+..|+.++||||+||+++||+
T Consensus       116 LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~  195 (258)
T d1k2pa_         116 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY  195 (258)
T ss_dssp             HHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHH
Confidence            66677899999999999999999999999999876432    22357888999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |..||.+.+      ..+...++.+  +..                                       ...+...+.
T Consensus       196 t~g~~Pf~~~~------~~~~~~~i~~--~~~---------------------------------------~~~p~~~~~  228 (258)
T d1k2pa_         196 SLGKMPYERFT------NSETAEHIAQ--GLR---------------------------------------LYRPHLASE  228 (258)
T ss_dssp             TTSCCTTTTSC------HHHHHHHHHT--TCC---------------------------------------CCCCTTCCH
T ss_pred             hcCCCCCCCCC------HHHHHHHHHh--CCC---------------------------------------CCCcccccH
Confidence            8 788997544      3333333322  100                                       011234456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+.+||.+||+.||++|||++++++|
T Consensus       229 ~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         229 KVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            77899999999999999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.2e-31  Score=203.28  Aligned_cols=134  Identities=16%  Similarity=0.211  Sum_probs=103.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|.++++|||+||+||+++.++.+||+|||+|+.....     .....||+.|+|||++.+..|+.++||||+||+++||
T Consensus       127 LH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el  206 (317)
T d1xkka_         127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL  206 (317)
T ss_dssp             HHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHH
Confidence            67777899999999999999999999999999876432     2234689999999999999999999999999999999


Q ss_pred             hh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 AT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++ |.+||.+.+      . ..+..+... |..                                       ...+..++
T Consensus       207 ~t~g~~p~~~~~------~-~~~~~~i~~-~~~---------------------------------------~~~p~~~~  239 (317)
T d1xkka_         207 MTFGSKPYDGIP------A-SEISSILEK-GER---------------------------------------LPQPPICT  239 (317)
T ss_dssp             HTTSCCTTTTSC------G-GGHHHHHHH-TCC---------------------------------------CCCCTTBC
T ss_pred             HHCCCCCCCCCC------H-HHHHHHHHc-CCC---------------------------------------CCCCcccC
Confidence            98 778886433      2 222222221 110                                       01234556


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ..+.+|+.+||+.||++|||+.|+++|
T Consensus       240 ~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         240 IDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            678999999999999999999999876

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.2e-30  Score=198.36  Aligned_cols=134  Identities=14%  Similarity=0.187  Sum_probs=103.5

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCC----CCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHF----TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|||+||+||+++.++.+||+|||+|+......    ....|++.|+|||++.+..|+.++||||+||+++|++
T Consensus       131 LH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell  210 (287)
T d1opja_         131 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA  210 (287)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHH
Confidence            677778999999999999999999999999998764332    2235788899999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHH
Q psy16751        105 TGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG  184 (214)
Q Consensus       105 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (214)
                      +|..||....      ....+..+... +..                                       ...+..++.+
T Consensus       211 ~~~~p~~~~~------~~~~~~~~i~~-~~~---------------------------------------~~~~~~~~~~  244 (287)
T d1opja_         211 TYGMSPYPGI------DLSQVYELLEK-DYR---------------------------------------MERPEGCPEK  244 (287)
T ss_dssp             TTSCCSSTTC------CHHHHHHHHHT-TCC---------------------------------------CCCCTTCCHH
T ss_pred             hCCCCCCCcc------hHHHHHHHHhc-CCC---------------------------------------CCCCccchHH
Confidence            9776655332      23333333221 000                                       0123445667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q psy16751        185 FSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       185 ~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +.+|+.+||+.||++|||++|+++
T Consensus       245 l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         245 VYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHH
Confidence            899999999999999999999975

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3e-30  Score=196.00  Aligned_cols=135  Identities=9%  Similarity=0.057  Sum_probs=96.5

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      .+|.++++|||+||+||+++.++.+||+|||+|+.....      .....||+.|+|||++.+..++.++||||+||+++
T Consensus       125 ~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~  204 (283)
T d1mqba_         125 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW  204 (283)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred             hccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHH
Confidence            367777899999999999999999999999999876432      12236788999999999999999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |++++..++....      ....+.........                                        ...+..+
T Consensus       205 el~t~~~~~~~~~------~~~~~~~~i~~~~~----------------------------------------~~~~~~~  238 (283)
T d1mqba_         205 EVMTYGERPYWEL------SNHEVMKAINDGFR----------------------------------------LPTPMDC  238 (283)
T ss_dssp             HHHTTSCCTTTTC------CHHHHHHHHHTTCC----------------------------------------CCCCTTC
T ss_pred             HHHhCCCCccccC------CHHHHHHHHhccCC----------------------------------------CCCchhh
Confidence            9999665554322      12222222111000                                        0122345


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||+.||++|||+.|+++
T Consensus       239 ~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         239 PSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            567889999999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.3e-31  Score=198.87  Aligned_cols=134  Identities=13%  Similarity=0.252  Sum_probs=96.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHh
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELA  104 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~  104 (214)
                      +|.++++|||+||+||+++.++.+||+|||+|+.....    .....||+.|+|||++.+..|+.++||||+||+++||+
T Consensus       124 lH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~l  203 (273)
T d1mp8a_         124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL  203 (273)
T ss_dssp             HHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred             hcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHH
Confidence            67777899999999999999999999999999876432    23446788999999999999999999999999999998


Q ss_pred             h-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        105 T-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       105 ~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      + |.+||...+      ..+.+..+..  |..                                       ...+..++.
T Consensus       204 t~g~~P~~~~~------~~~~~~~i~~--~~~---------------------------------------~~~~~~~~~  236 (273)
T d1mp8a_         204 MHGVKPFQGVK------NNDVIGRIEN--GER---------------------------------------LPMPPNCPP  236 (273)
T ss_dssp             TTSCCTTTTCC------GGGHHHHHHT--TCC---------------------------------------CCCCTTCCH
T ss_pred             hcCCCCCCCCC------HHHHHHHHHc--CCC---------------------------------------CCCCCCCCH
Confidence            7 888887544      3333333221  110                                       012344566


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      ++.+||.+||+.||++|||+.|+++|
T Consensus       237 ~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         237 TLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            78999999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=3.1e-31  Score=200.95  Aligned_cols=164  Identities=15%  Similarity=0.148  Sum_probs=113.2

Q ss_pred             cchhhhhccCchhhhhHHHHHH--hhh--cccccccccccccccccccCCCcceEEeecCCceeccC------CCCCCCc
Q psy16751          3 SIFNFFVAFGSLEETDKKRRLY--IRN--ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK------HFTEDVQ   72 (214)
Q Consensus         3 ~l~~~~~~~~~~~~~d~k~~~~--~~~--~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~------~~~~~~~   72 (214)
                      +|.+++...+.+...++...+.  +..  .+|.++++|||+||+||++..++.++++|||.+.....      .....+|
T Consensus        97 ~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~G  176 (277)
T d1o6ya_          97 TLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG  176 (277)
T ss_dssp             EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC--------------
T ss_pred             EehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccC
Confidence            4556666666666666644222  222  36777789999999999999999999999999876532      2344589


Q ss_pred             CCcccchHHHhcCCCCcchhhHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccc
Q psy16751         73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK  152 (214)
Q Consensus        73 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  152 (214)
                      |+.|+|||++.+..|+.++||||+||++++|++|.+||.+.+      ..+.+.++.+.-..++.               
T Consensus       177 t~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~~~~~~~~~~~---------------  235 (277)
T d1o6ya_         177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVREDPIPPS---------------  235 (277)
T ss_dssp             --TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCCCGG---------------
T ss_pred             cccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC------HHHHHHHHHhcCCCCCc---------------
Confidence            999999999999899999999999999999999999997544      34444444332111110               


Q ss_pred             cCccccCCCCCCCchhhHHHhhcCCChhhHHHHHHHHHHccccCCCCCC-CHHHHhcCCC
Q psy16751        153 KGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA-TAADCLQHPW  211 (214)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-t~~e~l~hp~  211 (214)
                                             ......+.++.+||.+||++||++|| |++++ .|+|
T Consensus       236 -----------------------~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l  271 (277)
T d1o6ya_         236 -----------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADL  271 (277)
T ss_dssp             -----------------------GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHH
T ss_pred             -----------------------hhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHH
Confidence                                   01234456788999999999999999 55554 4444

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-30  Score=195.72  Aligned_cols=141  Identities=11%  Similarity=0.141  Sum_probs=104.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      .+|.++++|+|+||+||+++.++.+||+|||+|+.....    .....||+.|+|||.+.+..++.++||||+||+++|+
T Consensus       128 ~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el  207 (285)
T d1fmka3         128 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  207 (285)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHH
Confidence            477778899999999999999999999999999876422    2335789999999999999999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHH
Q psy16751        104 ATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR  183 (214)
Q Consensus       104 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (214)
                      ++|..|+.....     ..+.+..+.+.  ..                                       ...+..++.
T Consensus       208 ~t~~~p~~~~~~-----~~~~~~~i~~~--~~---------------------------------------~~~~~~~~~  241 (285)
T d1fmka3         208 TTKGRVPYPGMV-----NREVLDQVERG--YR---------------------------------------MPCPPECPE  241 (285)
T ss_dssp             HTTTCCSSTTCC-----HHHHHHHHHTT--CC---------------------------------------CCCCTTSCH
T ss_pred             HhCCCCCCCCCC-----HHHHHHHHHhc--CC---------------------------------------CCCCcccCH
Confidence            996655543221     23333332211  00                                       012344566


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc--CCCCCC
Q psy16751        184 GFSEFLRPMLAYDPKLRATAADCLQ--HPWLQN  214 (214)
Q Consensus       184 ~~~~ll~~~l~~dp~~R~t~~e~l~--hp~f~~  214 (214)
                      ++.+|+.+||+.||++|||++++++  ++||.+
T Consensus       242 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         242 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            7899999999999999999999987  888853

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.9e-30  Score=192.31  Aligned_cols=134  Identities=14%  Similarity=0.142  Sum_probs=103.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      +|.++++|+|+||+||+++.++.+||+|||+++.....      .....|+..|+|||.+.+..++.++||||+||+++|
T Consensus       127 lH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~e  206 (273)
T d1u46a_         127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE  206 (273)
T ss_dssp             HHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             hhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHH
Confidence            67778899999999999999999999999999977432      223467788999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |++ |..||.+.+      ..+.+..+.+. +..                                       ...+...
T Consensus       207 mlt~G~~Pf~~~~------~~~~~~~i~~~-~~~---------------------------------------~~~~~~~  240 (273)
T d1u46a_         207 MFTYGQEPWIGLN------GSQILHKIDKE-GER---------------------------------------LPRPEDC  240 (273)
T ss_dssp             HHTTSCCTTTTCC------HHHHHHHHHTS-CCC---------------------------------------CCCCTTC
T ss_pred             HHhCCCCCCCCcC------HHHHHHHHHhC-CCC---------------------------------------CCCcccc
Confidence            997 899997544      44444444321 000                                       0012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+|+.+||..||++|||+.|++.
T Consensus       241 ~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         241 PQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            567889999999999999999999863

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=9.4e-30  Score=194.89  Aligned_cols=133  Identities=14%  Similarity=0.162  Sum_probs=102.7

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccC-----CCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-----HFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFEL  103 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l  103 (214)
                      +|..+++|||+||+||+++.++.+||+|||+|+....     ......|++.|+|||.+.+..|+.++||||+||+++||
T Consensus       156 lH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~el  235 (301)
T d1lufa_         156 LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI  235 (301)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             cccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHH
Confidence            6677779999999999999999999999999986532     23345788999999999999999999999999999999


Q ss_pred             hhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhH
Q psy16751        104 ATGD-YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA  182 (214)
Q Consensus       104 ~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (214)
                      ++|. +||.+.+      ..+.+..+.+  |..+                                       ..+..++
T Consensus       236 l~~~~~p~~~~~------~~e~~~~v~~--~~~~---------------------------------------~~p~~~~  268 (301)
T d1lufa_         236 FSYGLQPYYGMA------HEEVIYYVRD--GNIL---------------------------------------ACPENCP  268 (301)
T ss_dssp             HTTTCCTTTTSC------HHHHHHHHHT--TCCC---------------------------------------CCCTTCC
T ss_pred             HccCCCCCCCCC------HHHHHHHHHc--CCCC---------------------------------------CCCccch
Confidence            9985 5676433      3333333221  1100                                       1234455


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        183 RGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       183 ~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      .++.+||.+||+.||++|||+.|+++
T Consensus       269 ~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         269 LELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            67889999999999999999999975

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-29  Score=189.85  Aligned_cols=134  Identities=11%  Similarity=0.160  Sum_probs=97.4

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhh-CC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELAT-GD  107 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~-g~  107 (214)
                      +|...++|+|++|.||+++.++.+|++|||+++..........++..|+|||++.+..++.++|||||||+++||++ |.
T Consensus       119 lH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~  198 (262)
T d1byga_         119 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  198 (262)
T ss_dssp             HHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccCceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCC
Confidence            66677799999999999999999999999999987766666788999999999999999999999999999999998 67


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHHHH
Q psy16751        108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE  187 (214)
Q Consensus       108 ~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (214)
                      +||...+      ..+....+..  +.                                       +...+...++++.+
T Consensus       199 ~p~~~~~------~~~~~~~i~~--~~---------------------------------------~~~~~~~~~~~~~~  231 (262)
T d1byga_         199 VPYPRIP------LKDVVPRVEK--GY---------------------------------------KMDAPDGCPPAVYE  231 (262)
T ss_dssp             CSCTTSC------GGGHHHHHTT--TC---------------------------------------CCCCCTTCCHHHHH
T ss_pred             CCCCCCC------HHHHHHHHHc--CC---------------------------------------CCCCCccCCHHHHH
Confidence            7776433      2222222110  00                                       00123445567889


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q psy16751        188 FLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       188 ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      |+.+||..||.+|||+.+++++
T Consensus       232 li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         232 VMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcccCHhHCcCHHHHHHH
Confidence            9999999999999999998863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-28  Score=188.73  Aligned_cols=134  Identities=16%  Similarity=0.199  Sum_probs=105.1

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.+.++|||+||+||+++.++.+||+|||+++.....     .....|++.|+|||.+.+..|+.++||||+||+++|
T Consensus       150 ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~e  229 (299)
T d1fgka_         150 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  229 (299)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHH
Confidence            377777899999999999999999999999999877432     233578899999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |++ |.+||...+       ...+...... |..+                                       ..+...
T Consensus       230 ll~~g~~p~~~~~-------~~~~~~~i~~-~~~~---------------------------------------~~p~~~  262 (299)
T d1fgka_         230 IFTLGGSPYPGVP-------VEELFKLLKE-GHRM---------------------------------------DKPSNC  262 (299)
T ss_dssp             HHTTSCCSSTTCC-------HHHHHHHHHT-TCCC---------------------------------------CCCSSC
T ss_pred             hccCCCCCCCCCC-------HHHHHHHHHc-CCCC---------------------------------------CCCccc
Confidence            998 677886433       3333332221 1100                                       112344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +.++.+||.+||+.||++|||+.|+++
T Consensus       263 ~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         263 TNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            567889999999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=4.1e-28  Score=185.55  Aligned_cols=144  Identities=12%  Similarity=0.065  Sum_probs=102.3

Q ss_pred             cccccccccccccccccccCC---CcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchhhH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP---PFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSADIW   94 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~---~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Diw   94 (214)
                      .+|.++++|||+||+||++..   +..+||+|||+|+.....          ....+||+.|+|||++.+.+++.++|||
T Consensus       118 ~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  197 (299)
T d1ckia_         118 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  197 (299)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHH
T ss_pred             HHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEE
Confidence            367777899999999998654   567999999999977431          2345899999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhh
Q psy16751         95 SVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEK  174 (214)
Q Consensus        95 s~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (214)
                      |+||+++|+++|..||.......   ......+.....-.++.+.                                   
T Consensus       198 SlG~~l~el~tg~~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----------------------------------  239 (299)
T d1ckia_         198 SLGYVLMYFNLGSLPWQGLKAAT---KRQKYERISEKKMSTPIEV-----------------------------------  239 (299)
T ss_dssp             HHHHHHHHHHHSSCTTCCCC----------HHHHHHHHHHSCHHH-----------------------------------
T ss_pred             ecCHHHHHHHhCCCcccccchHH---HHHHHHHhhcccCCCChhH-----------------------------------
Confidence            99999999999999997654221   1111111111100000000                                   


Q ss_pred             cCCChhhHHHHHHHHHHccccCCCCCCCHHH---HhcCCC
Q psy16751        175 YNWTPESARGFSEFLRPMLAYDPKLRATAAD---CLQHPW  211 (214)
Q Consensus       175 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e---~l~hp~  211 (214)
                        ....++.++.+|+.+||+.||++||++++   +|+|+|
T Consensus       240 --~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         240 --LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             --HTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             --hccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence              11344567889999999999999999874   456654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.2e-29  Score=190.44  Aligned_cols=139  Identities=19%  Similarity=0.308  Sum_probs=108.0

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|...++|+|+|++||+++.++.+||+|||+|+.....     .....||+.|+|||.+.+..++.++||||+||+++|
T Consensus       148 ~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~E  227 (308)
T d1p4oa_         148 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE  227 (308)
T ss_dssp             HHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHH
Confidence            366677899999999999999999999999999876432     234478999999999999999999999999999999


Q ss_pred             HhhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LATGD-YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |++|. +||.+.+      ..+.+..+.+  |..                                       ...+..+
T Consensus       228 l~t~~~~p~~~~~------~~~~~~~i~~--~~~---------------------------------------~~~p~~~  260 (308)
T d1p4oa_         228 IATLAEQPYQGLS------NEQVLRFVME--GGL---------------------------------------LDKPDNC  260 (308)
T ss_dssp             HHHTSCCTTTTSC------HHHHHHHHHT--TCC---------------------------------------CCCCTTC
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHh--CCC---------------------------------------CCCcccc
Confidence            99985 6675433      3333333321  000                                       0122445


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc------CCCCC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ------HPWLQ  213 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~------hp~f~  213 (214)
                      +..+.++|.+||+.||++|||++++++      +|+|+
T Consensus       261 ~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~  298 (308)
T d1p4oa_         261 PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  298 (308)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCc
Confidence            567899999999999999999999997      67664

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.3e-28  Score=187.68  Aligned_cols=135  Identities=15%  Similarity=0.150  Sum_probs=101.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC-------CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHH
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-------FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAF  101 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~  101 (214)
                      +|..+++|+|+|++||+++.++.+||+|||+++.....       .....||+.|+|||.+.+..++.++||||+|++++
T Consensus       146 lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~  225 (311)
T d1r0pa_         146 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW  225 (311)
T ss_dssp             HHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHH
Confidence            66777799999999999999999999999999876422       22346889999999999999999999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        102 ELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       102 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |+++|..||.....     ..+....+..  |..+                                       ..+..+
T Consensus       226 El~t~~~p~~~~~~-----~~~~~~~i~~--g~~~---------------------------------------~~p~~~  259 (311)
T d1r0pa_         226 ELMTRGAPPYPDVN-----TFDITVYLLQ--GRRL---------------------------------------LQPEYC  259 (311)
T ss_dssp             HHHTTSCCSCC-----------CHHHHHT--TCCC---------------------------------------CCCTTC
T ss_pred             HHHHCCCCCCCCCC-----HHHHHHHHHc--CCCC---------------------------------------CCcccC
Confidence            99998777753221     1111111110  1100                                       012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhcC
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      +..+.+|+.+||+.||++|||+.|+++|
T Consensus       260 ~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         260 PDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            5678899999999999999999999986

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.9e-28  Score=186.56  Aligned_cols=82  Identities=18%  Similarity=0.063  Sum_probs=68.3

Q ss_pred             ccccccccccccccccCCCcceEEeecCCceeccC-------CCCCCCcCCcccchHHHhcCC------CCcchhhHHHH
Q psy16751         31 VDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDK-------HFTEDVQTRQYRSLEVLINAG------YDCSADIWSVA   97 (214)
Q Consensus        31 ~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~~y~aPE~~~~~~------~~~~~Diws~G   97 (214)
                      ..+++|+|+||+||+++.++.+||+|||+++....       .....+||+.|+|||++.+..      ++.++||||+|
T Consensus       126 ~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~G  205 (303)
T d1vjya_         126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             BCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             CCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhH
Confidence            45779999999999999999999999999987632       233468999999999998652      56789999999


Q ss_pred             HHHHHHhhCCCCCCC
Q psy16751         98 CMAFELATGDYLFEP  112 (214)
Q Consensus        98 ~~l~~l~~g~~~f~~  112 (214)
                      |+++|+++|..+|..
T Consensus       206 vvl~el~tg~~~~~~  220 (303)
T d1vjya_         206 LVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHTBCBTTB
T ss_pred             HHHHHHhhCCCCCCc
Confidence            999999999888754

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.2e-28  Score=185.88  Aligned_cols=135  Identities=15%  Similarity=0.159  Sum_probs=105.3

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCC-----CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH-----FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFE  102 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~  102 (214)
                      .+|.++++|||+||+||+++.++.+|++|||.++.....     .....||+.|+|||++.+..++.++||||+||+++|
T Consensus       160 ~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~e  239 (311)
T d1t46a_         160 FLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE  239 (311)
T ss_dssp             HHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHH
Confidence            477777899999999999999999999999999877532     234578999999999999999999999999999999


Q ss_pred             Hhh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhh
Q psy16751        103 LAT-GDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES  181 (214)
Q Consensus       103 l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (214)
                      |++ |.++|...+      ..+.+..+.+. +..+                                       ..+...
T Consensus       240 llt~g~p~~~~~~------~~~~~~~~i~~-~~~~---------------------------------------~~~~~~  273 (311)
T d1t46a_         240 LFSLGSSPYPGMP------VDSKFYKMIKE-GFRM---------------------------------------LSPEHA  273 (311)
T ss_dssp             HHTTTCCSSTTCC------SSHHHHHHHHH-TCCC---------------------------------------CCCTTS
T ss_pred             HHhCCCCCCCCCC------HHHHHHHHHhc-CCCC---------------------------------------CCcccc
Confidence            998 566665433      23444444332 1100                                       012344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHhc
Q psy16751        182 ARGFSEFLRPMLAYDPKLRATAADCLQ  208 (214)
Q Consensus       182 ~~~~~~ll~~~l~~dp~~R~t~~e~l~  208 (214)
                      +..+.+||.+||++||++|||++|+++
T Consensus       274 ~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         274 PAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            567889999999999999999999885

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.2e-28  Score=187.86  Aligned_cols=134  Identities=13%  Similarity=0.146  Sum_probs=101.8

Q ss_pred             ccccccccccccccccccCCCcceEEeecCCceeccCC--CCCCCcCCcccchHHHhcCCCCcchhhHHHHHHHHHHhhC
Q psy16751         29 CWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKH--FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG  106 (214)
Q Consensus        29 ~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~~l~~g  106 (214)
                      +|..+++|||+||.||+++.++.+||+|||+|+.....  .....||..|+|||.+.+..|+.++||||+||+++||++|
T Consensus       143 lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~  222 (309)
T d1fvra_         143 LSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  222 (309)
T ss_dssp             HHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             hhcCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhc
Confidence            67777899999999999999999999999999866533  2234688999999999999999999999999999999997


Q ss_pred             C-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHHhhcCCChhhHHHH
Q psy16751        107 D-YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGF  185 (214)
Q Consensus       107 ~-~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (214)
                      . +||...+      ..+....+.+  |.                                       +...+..++.++
T Consensus       223 ~~~p~~~~~------~~~~~~~i~~--~~---------------------------------------~~~~~~~~~~~~  255 (309)
T d1fvra_         223 GGTPYCGMT------CAELYEKLPQ--GY---------------------------------------RLEKPLNCDDEV  255 (309)
T ss_dssp             SCCTTTTCC------HHHHHHHGGG--TC---------------------------------------CCCCCTTBCHHH
T ss_pred             CCCCCCCCC------HHHHHHHHHh--cC---------------------------------------CCCCCccCCHHH
Confidence            6 5565332      2222222111  00                                       001234456688


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcC
Q psy16751        186 SEFLRPMLAYDPKLRATAADCLQH  209 (214)
Q Consensus       186 ~~ll~~~l~~dp~~R~t~~e~l~h  209 (214)
                      .+||.+||+.||++|||++|++++
T Consensus       256 ~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         256 YDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.94  E-value=4.4e-27  Score=179.21  Aligned_cols=140  Identities=8%  Similarity=0.036  Sum_probs=103.0

Q ss_pred             cccccccccccccccccccCC-----CcceEEeecCCceeccCC----------CCCCCcCCcccchHHHhcCCCCcchh
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLP-----PFLFDIGTYRNACWVDKH----------FTEDVQTRQYRSLEVLINAGYDCSAD   92 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~-----~~~~kl~Dfg~a~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~D   92 (214)
                      .+|..+++|||+||+||++..     .+.+||+|||+|+.....          ....+||+.|+|||++.+..++.++|
T Consensus       116 ~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~D  195 (293)
T d1csna_         116 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDD  195 (293)
T ss_dssp             HHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHH
T ss_pred             HHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHH
Confidence            377778899999999999864     578999999999876421          23457999999999999999999999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHhhccCCccccccccCccccCCCCCCCchhhHHH
Q psy16751         93 IWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLV  172 (214)
Q Consensus        93 iws~G~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (214)
                      |||+||+++++++|..||.+....   ........+...-...+.+.                                 
T Consensus       196 iwSlG~~l~elltg~~Pf~~~~~~---~~~~~~~~i~~~~~~~~~~~---------------------------------  239 (293)
T d1csna_         196 LEALGHVFMYFLRGSLPWQGLKAA---TNKQKYERIGEKKQSTPLRE---------------------------------  239 (293)
T ss_dssp             HHHHHHHHHHHHHSSCTTSSCCSC---CHHHHHHHHHHHHHHSCHHH---------------------------------
T ss_pred             HHHhhHHHHHHHhCCCcCCCccch---hHHHHHHHHHhccCCCChHH---------------------------------
Confidence            999999999999999999754321   13333333322111111100                                 


Q ss_pred             hhcCCChhhHHHHHHHHHHccccCCCCCCCHHHHh
Q psy16751        173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCL  207 (214)
Q Consensus       173 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~e~l  207 (214)
                          ....+++++.+++..|+..+|++||+.+.+.
T Consensus       240 ----l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         240 ----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             ----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             ----hcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence                0123445778999999999999999866543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.67  E-value=3.9e-10  Score=79.23  Aligned_cols=67  Identities=10%  Similarity=-0.056  Sum_probs=45.9

Q ss_pred             cccccccccccccccccccCCCcceEEeecCCceeccCCCCCCCcCCcccch--H---HHhcCCCCcchhhHHHHHHH
Q psy16751         28 ACWVDKHFTEDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSL--E---VLINAGYDCSADIWSVACMA  100 (214)
Q Consensus        28 ~~~~~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~y~aP--E---~~~~~~~~~~~Diws~G~~l  100 (214)
                      .+|.++++|+|+||+||+++.++ ++|+|||.|.....+...     .|...  +   ......|+..+|+||+.-.+
T Consensus       118 ~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         118 KFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWR-----EILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             HHHHTTEECSCCSTTSEEEETTE-EEECCCTTCEETTSTTHH-----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             HHhhCCEEEccCChhheeeeCCC-EEEEECCCcccCCCCCcH-----HHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence            36777789999999999998654 889999999765433111     11111  1   12245688999999986544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=82.91  E-value=0.17  Score=36.55  Aligned_cols=31  Identities=16%  Similarity=0.028  Sum_probs=26.7

Q ss_pred             cccccccccccccccCCCcceEEeecCCcee
Q psy16751         32 DKHFTEDVQTRQYRSLPPFLFDIGTYRNACW   62 (214)
Q Consensus        32 ~~~~h~d~k~~nil~~~~~~~kl~Dfg~a~~   62 (214)
                      ...+|.|+.+.|++.+.+...-|+||+.++.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhcccccceeEeccccccc
Confidence            3458999999999999888889999999853

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=82.79  E-value=0.19  Score=34.92  Aligned_cols=28  Identities=4%  Similarity=-0.293  Sum_probs=24.3

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|+|+.+.|+++..+..+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            3799999999999887777899999874

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=82.09  E-value=0.19  Score=35.09  Aligned_cols=28  Identities=4%  Similarity=-0.194  Sum_probs=24.2

Q ss_pred             cccccccccccccCCCcceEEeecCCce
Q psy16751         34 HFTEDVQTRQYRSLPPFLFDIGTYRNAC   61 (214)
Q Consensus        34 ~~h~d~k~~nil~~~~~~~kl~Dfg~a~   61 (214)
                      .+|+|+.+.|+++++++.+-|+||+.+.
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEeeccCcceeecCCceEEEeechhcc
Confidence            3799999999999887777899999874