Psyllid ID: psy1684

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEASGY
Secondary Structure (PSIPRED)
cccccccHHHHHHHHcccccccccEEEEccccccccEEEEcccccEEEEEEcccccEEEEcccccccccHHHHHHHHHccccccEEEEccccEEcccccEEEccccccccccccEEEccccccHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccHHHHHHHHcccccccccEEEEEcccccccEEEEEEEccEEEEEEcccccEEEEEccccHHHHHHHHHHHHHHcccccccccccEcHHHccccEEEEcccHHHHHHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHcccccHHHcccHHHHHHHHHHHHHccccccEccccc
Coil and Loop (DISEMBL)
WYFGKIKRIEAEKKlllpendhgaflirdsesrkndyslseykrssfclkmttgrslfetqkagrttihypelvehyskdadglcvnlrkpcvqvSCRIYlvhgtnlsGVVVSAVdfgsggmtnaEVLHQVehgyrmpcppgcpprlydIMLECwlkdpvkrptfETLQWKLEDFftmegsdykeasgy
Flexible Loop (DISEMBL)
wyfgkikrieaekklllpendhgaflirdsesrkndyslseykrssfclkMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEdfftmegsdykeasgy
Low Complexity Region (SEG)
WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEASGY
Disordered region (IsUnstruct)
****KIKRI****KLLLP***HGAFLI****************RSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM***********
Disordered Region (DISOPRED)
WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT************
Disordered Region (DISEMBL)
WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS********
Disordered Region (DISPRO)
WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEASGY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q9V9J3	517	Tyrosine-protein kinase S	yes	N/A	0.338	0.123	0.797	1e-28
P42686	505	Tyrosine-protein kinase i	N/A	N/A	0.343	0.128	0.557	4e-20
P42688	362	Tyrosine-protein kinase S	N/A	N/A	0.328	0.171	0.567	8e-20
P42690	506	Tyrosine-protein kinase i	N/A	N/A	0.328	0.122	0.582	6e-19
P13116	532	Tyrosine-protein kinase S	N/A	N/A	0.285	0.101	0.625	2e-18
P13115	532	Tyrosine-protein kinase S	N/A	N/A	0.285	0.101	0.625	2e-18
P00523	533	Proto-oncogene tyrosine-p	yes	N/A	0.285	0.101	0.625	7e-18
P14084	568	Tyrosine-protein kinase t	N/A	N/A	0.248	0.082	0.684	1e-17
P15054	587	Tyrosine-protein kinase t	N/A	N/A	0.248	0.080	0.684	2e-17
P27446	537	Tyrosine-protein kinase F	N/A	N/A	0.275	0.096	0.609	2e-17

>sp|Q9V9J3|SRC42_DROME Tyrosine-protein kinase Src42A OS=Drosophila melanogaster GN=Src42A PE=2 SV=1

 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 60/69 (86%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVL QVEHGYRMP PP C PRLY+IMLECW KDP++RPTFETLQWKLEDF+T + 
Sbjct: 449 GMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSDQ 508

Query: 181 SDYKEASGY 189
           SDYKEA  Y
Sbjct: 509 SDYKEAQAY 517

Essential for correct eye morphogenesis (ommatidial R7 neuron formation), this requires the Ras1/MAPK signal transduction pathway. May be involved in the regulation of cytoskeleton organization and cell-cell contacts in developing ommatidia.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 2

>sp|P42686|SRK1_SPOLA Tyrosine-protein kinase isoform SRK1 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 51/70 (72%)

Query: 111 VVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW 170
           +++   F   GMTN EVL +++  YRMPCP  CP + +DIML+CW +DP  RPTFETLQW
Sbjct: 428 IITYGRFPYPGMTNPEVLEKIQQNYRMPCPANCPKQFHDIMLDCWREDPASRPTFETLQW 487

Query: 171 KLEDFFTMEG 180
           +LE+FF  EG
Sbjct: 488 QLEEFFNSEG 497

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42688|SRK2_SPOLA Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM+NAEVL  ++ GYRMPCP   P  LY IML+CW ++P  RPTFE LQW+LEDFF ++ 
Sbjct: 293 GMSNAEVLQNLDKGYRMPCPVTTPESLYQIMLDCWKRNPADRPTFEALQWRLEDFFVLDA 352

Query: 181 SDYKEAS 187
             Y+ A+
Sbjct: 353 GQYQHAA 359

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42690|SRK4_SPOLA Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 50/67 (74%)

Query: 111 VVSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW 170
           V++   F   GMTNA+VL Q++  YRMP P GCP +LY IM++CW +DP  RPTFETL W
Sbjct: 428 VITYGRFPYPGMTNAQVLEQIQQSYRMPRPMGCPEKLYAIMMDCWREDPASRPTFETLSW 487

Query: 171 KLEDFFT 177
           +LE+FFT
Sbjct: 488 QLEEFFT 494

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P13116|SRC2_XENLA Tyrosine-protein kinase Src-2 OS=Xenopus laevis GN=src-b PE=2 SV=3

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 464 GMVNREVLDQVERGYRMPCPPDCPESLHDLMFQCWRKDPEERPTFEYLQAFLEDYFTATE 523

Query: 181 SDYK 184
             Y+
Sbjct: 524 PQYQ 527

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P13115|SRC1_XENLA Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN=src-a PE=2 SV=4

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 464 GMVNREVLDQVERGYRMPCPPDCPESLHDLMFQCWRKDPEERPTFEYLQAFLEDYFTATE 523

Query: 181 SDYK 184
             Y+
Sbjct: 524 PQYQ 527

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P00523|SRC_CHICK Proto-oncogene tyrosine-protein kinase Src OS=Gallus gallus GN=SRC PE=1 SV=4

 Score = 90.1 bits (222), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 465 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 524

Query: 181 SDYK 184
             Y+
Sbjct: 525 PQYQ 528

Non-receptor protein tyrosine kinase which is activated following engagement of many different classes of cellular receptors including immune response receptors, integrins and other adhesion receptors, receptor protein tyrosine kinases, G protein-coupled receptors as well as cytokine receptors. Participates in signaling pathways that control a diverse spectrum of biological activities including gene transcription, immune response, cell adhesion, cell cycle progression, apoptosis, migration, and transformation. Due to functional redundancy between members of the SRC kinase family, identification of the specific role of each SRC kinase is very difficult. SRC appears to be one of the primary kinases activated following engagement of receptors and plays a role in the activation of other protein tyrosine kinase (PTK) families. Receptor clustering or dimerization leads to recruitment of SRC to the receptor complexes where it phosphorylates the tyrosine residues within the receptor cytoplasmic domains. Plays an important role in the regulation of cytoskeletal organization through phosphorylation of specific substrates involved in this process. When cells adhere via focal adhesions to the extra-cellular matrix, signals are transmitted by integrins into the cell and result in tyrosine phosphorylation of a number of focal adhesion proteins, including PTK2/FAK1 and paxillin (PXN). Also active at the sites of cell-cell contact adherens junctions and at gap junctions. Implicated in the regulation of pre-mRNA-processing. Might be involved not only in mediating the transduction of mitogenic signals at the level of the plasma membrane but also in controlling progression through the cell cycle via interaction with regulatory proteins in the nucleus.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P14084|SRC_AVISS Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain S1) GN=V-SRC PE=3 SV=3

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 44/57 (77%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT
Sbjct: 465 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 521

This phosphoprotein, required for both the initiation and the maintenance of neoplastic transformation, is a protein kinase that catalyzes the phosphorylation of tyrosine residues in vitro.

Galliformes (taxid: 8976)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P15054|SRC_AVIS2 Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain PR2257) GN=V-SRC PE=3 SV=3

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 44/57 (77%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT
Sbjct: 465 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 521

This phosphoprotein, required for both the initiation and the maintenance of neoplastic transformation, is a protein kinase that catalyzes the phosphorylation of tyrosine residues in vitro.

Galliformes (taxid: 8976)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P27446|FYN_XIPHE Tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCP  CP  L+++ML+CW KDP +RPTFE LQ  LED+FT   
Sbjct: 469 GMNNREVLEQVERGYRMPCPQDCPASLHELMLQCWKKDPEERPTFEYLQAFLEDYFTATE 528

Query: 181 SDYK 184
             Y+
Sbjct: 529 PQYQ 532

Tyrosine-protein kinase implicated in the control of cell growth. Plays a role in the regulation of intracellular calcium levels. Required in brain development and mature brain function with important roles in the regulation of axon growth, axon guidance, and neurite extension.

Xiphophorus helleri (taxid: 8084)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
340716501	527	PREDICTED: tyrosine-protein kinase Src42	0.338	0.121	0.913	1e-32
350404530	518	PREDICTED: tyrosine-protein kinase Src42	0.338	0.123	0.913	1e-32
383860313	505	PREDICTED: tyrosine-protein kinase Src42	0.338	0.126	0.913	1e-32
328788805	505	PREDICTED: tyrosine-protein kinase Src42	0.338	0.126	0.913	1e-32
307212546	505	Tyrosine-protein kinase Src42A [Harpegna	0.338	0.126	0.913	1e-32
270010401	422	hypothetical protein TcasGA2_TC009792 [T	0.338	0.151	0.884	4e-31
332020426	505	Tyrosine-protein kinase Src42A [Acromyrm	0.338	0.126	0.884	4e-31
91086687	507	PREDICTED: similar to AGAP006270-PA [Tri	0.338	0.126	0.884	4e-31
427789247	538	Putative protein kinase [Rhipicephalus p	0.328	0.115	0.895	5e-31
241999648	447	src tyrosine kinase, putative [Ixodes sc	0.328	0.138	0.895	7e-31

>gi|340716501|ref|XP_003396736.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 1 [Bombus terrestris]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 65/69 (94%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCP  LYDIMLECW KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 459 GMTNAEVLHQVEHGYRMPCPPGCPTALYDIMLECWNKDPMKRPTFETLQWKLEDFFTMEG 518

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 519 SEYKEASAY 527

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404530|ref|XP_003487134.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 3 [Bombus impatiens]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 65/69 (94%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCP  LYDIMLECW KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 450 GMTNAEVLHQVEHGYRMPCPPGCPTALYDIMLECWNKDPMKRPTFETLQWKLEDFFTMEG 509

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 510 SEYKEASAY 518

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860313|ref|XP_003705635.1| PREDICTED: tyrosine-protein kinase Src42A-like [Megachile rotundata]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 65/69 (94%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCP  LYDIMLECW KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 437 GMTNAEVLHQVEHGYRMPCPPGCPTALYDIMLECWNKDPMKRPTFETLQWKLEDFFTMEG 496

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 497 SEYKEASAY 505

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788805|ref|XP_396043.3| PREDICTED: tyrosine-protein kinase Src42A-like isoform 1 [Apis mellifera] gi|340716503|ref|XP_003396737.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 2 [Bombus terrestris] gi|340716505|ref|XP_003396738.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 3 [Bombus terrestris] gi|350404526|ref|XP_003487132.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 1 [Bombus impatiens] gi|350404528|ref|XP_003487133.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 2 [Bombus impatiens] gi|380027727|ref|XP_003697570.1| PREDICTED: tyrosine-protein kinase Src42A-like [Apis florea]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 65/69 (94%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCP  LYDIMLECW KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 437 GMTNAEVLHQVEHGYRMPCPPGCPTALYDIMLECWNKDPMKRPTFETLQWKLEDFFTMEG 496

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 497 SEYKEASAY 505

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212546|gb|EFN88269.1| Tyrosine-protein kinase Src42A [Harpegnathos saltator]

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 65/69 (94%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCP  LYDIMLECW KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 437 GMTNAEVLHQVEHGYRMPCPPGCPSTLYDIMLECWNKDPMKRPTFETLQWKLEDFFTMEG 496

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 497 SEYKEASAY 505

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270010401|gb|EFA06849.1| hypothetical protein TcasGA2_TC009792 [Tribolium castaneum]

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 64/69 (92%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMP PPGCP  LYDIMLECW +DP+KRPTFETLQWKLEDFFTMEG
Sbjct: 354 GMTNAEVLHQVEHGYRMPSPPGCPAPLYDIMLECWNRDPMKRPTFETLQWKLEDFFTMEG 413

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 414 SEYKEASAY 422

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020426|gb|EGI60846.1| Tyrosine-protein kinase Src42A [Acromyrmex echinatior]

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 64/69 (92%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMP PPGCP  LY+IMLECW KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 437 GMTNAEVLHQVEHGYRMPSPPGCPDTLYNIMLECWNKDPMKRPTFETLQWKLEDFFTMEG 496

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 497 SEYKEASAY 505

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086687|ref|XP_969129.1| PREDICTED: similar to AGAP006270-PA [Tribolium castaneum]

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 64/69 (92%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMP PPGCP  LYDIMLECW +DP+KRPTFETLQWKLEDFFTMEG
Sbjct: 439 GMTNAEVLHQVEHGYRMPSPPGCPAPLYDIMLECWNRDPMKRPTFETLQWKLEDFFTMEG 498

Query: 181 SDYKEASGY 189
           S+YKEAS Y
Sbjct: 499 SEYKEASAY 507

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427789247|gb|JAA60075.1| Putative protein kinase [Rhipicephalus pulchellus]

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 64/67 (95%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCPP LY+IMLE W KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 469 GMTNAEVLHQVEHGYRMPCPPGCPPALYEIMLETWHKDPMKRPTFETLQWKLEDFFTMEG 528

Query: 181 SDYKEAS 187
           S+YKEA+
Sbjct: 529 SEYKEAA 535

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241999648|ref|XP_002434467.1| src tyrosine kinase, putative [Ixodes scapularis] gi|215497797|gb|EEC07291.1| src tyrosine kinase, putative [Ixodes scapularis]

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 64/67 (95%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTNAEVLHQVEHGYRMPCPPGCPP LY+IMLE W KDP+KRPTFETLQWKLEDFFTMEG
Sbjct: 378 GMTNAEVLHQVEHGYRMPCPPGCPPALYEIMLETWHKDPMKRPTFETLQWKLEDFFTMEG 437

Query: 181 SDYKEAS 187
           S+YKEA+
Sbjct: 438 SEYKEAA 444

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
FB|FBgn0264959	517	Src42A "Src oncogene at 42A" [	0.365	0.133	0.797	2e-56
WB|WBGene00005078	507	src-2 [Caenorhabditis elegans	0.417	0.155	0.650	1.1e-45
UNIPROTKB|F1RZK6	511	FRK "Uncharacterized protein"	0.544	0.201	0.454	2.8e-36
RGD|621423	506	Frk "fyn-related kinase" [Ratt	0.359	0.134	0.492	1.6e-34
UNIPROTKB|Q62662	506	Frk "Tyrosine-protein kinase F	0.359	0.134	0.492	1.6e-34
UNIPROTKB|E1BPI3	514	FRK "Uncharacterized protein"	0.492	0.180	0.448	1.6e-34
UNIPROTKB|P42685	505	FRK "Tyrosine-protein kinase F	0.359	0.134	0.507	3.9e-34
MGI|MGI:103265	512	Frk "fyn-related kinase" [Mus	0.492	0.181	0.438	9.4e-34
UNIPROTKB|J9NY14	505	FRK "Uncharacterized protein"	0.492	0.184	0.459	2.8e-33
UNIPROTKB|F1PR52	509	FRK "Uncharacterized protein"	0.492	0.182	0.459	2.9e-33

FB|FBgn0264959 Src42A "Src oncogene at 42A" [Drosophila melanogaster (taxid:7227)]

 Score = 313 (115.2 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
 Identities = 55/69 (79%), Positives = 60/69 (86%)

Query:   121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
             GMTNAEVL QVEHGYRMP PP C PRLY+IMLECW KDP++RPTFETLQWKLEDF+T + 
Sbjct:   449 GMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSDQ 508

Query:   181 SDYKEASGY 189
             SDYKEA  Y
Sbjct:   509 SDYKEAQAY 517

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=ISS

GO:0007154 "cell communication" evidence=IDA

GO:0005912 "adherens junction" evidence=IDA

GO:0048749 "compound eye development" evidence=IMP

GO:0004713 "protein tyrosine kinase activity" evidence=ISS;IDA;NAS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IGI

GO:0042059 "negative regulation of epidermal growth factor receptor signaling pathway" evidence=IGI

GO:0007391 "dorsal closure" evidence=IGI;IMP;TAS

GO:0006468 "protein phosphorylation" evidence=IMP;IDA;NAS

GO:0007254 "JNK cascade" evidence=TAS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0046529 "imaginal disc fusion, thorax closure" evidence=IMP

GO:0007395 "dorsal closure, spreading of leading edge cells" evidence=IMP

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051017 "actin filament bundle assembly" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0007435 "salivary gland morphogenesis" evidence=IMP

GO:0006099 "tricarboxylic acid cycle" evidence=IDA

GO:0034332 "adherens junction organization" evidence=IMP

GO:0090136 "epithelial cell-cell adhesion" evidence=IMP

GO:0043277 "apoptotic cell clearance" evidence=IMP

GO:0045886 "negative regulation of synaptic growth at neuromuscular junction" evidence=IGI

WB|WBGene00005078 src-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 286 (105.7 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
 Identities = 54/83 (65%), Positives = 63/83 (75%)

Query:   109 GVVVSA-VDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
             G++++  V FG     GMTNAEVL QV+ GYRMPCP GCP  LYDIM +CW  DP KRPT
Sbjct:   422 GILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCPAGCPVTLYDIMQQCWRSDPDKRPT 481

Query:   165 FETLQWKLEDFFTMEGSDYKEAS 187
             FETLQWKLED F ++ S+YKEAS
Sbjct:   482 FETLQWKLEDLFNLDSSEYKEAS 504

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

UNIPROTKB|F1RZK6 FRK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 222 (83.2 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
 Identities = 50/110 (45%), Positives = 68/110 (61%)

Query:     1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRS---SFCLKMTTGRSL 57
             W+FG IKR +AEK+LL PEN  GAFLIR+SES+K D+SLS         + ++       
Sbjct:   125 WFFGAIKRADAEKQLLYPENQEGAFLIRESESQKGDFSLSVLHEGIVKHYRIRRLDEGGF 184

Query:    58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC--VQVSCRIYLVHGT 105
             F T++   +T++  E V HYS+ +DGLCV L KPC  +QV   I L + T
Sbjct:   185 FLTRRRTFSTLN--EFVSHYSRTSDGLCVKLGKPCLKIQVPATIDLSYKT 232

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

RGD|621423 Frk "fyn-related kinase" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 34/69 (49%), Positives = 47/69 (68%)

Query:   121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
             GMT A+V+H +   YR+P P  CP + Y IM+ECW  +P +RPTFETL WKLED+F  + 
Sbjct:   437 GMTGAQVIHMLGQNYRLPQPSNCPEQFYSIMMECWNVEPKQRPTFETLHWKLEDYFEPDS 496

Query:   181 SDYKEASGY 189
             S Y + + +
Sbjct:   497 S-YSDTNNF 504

GO:0004713 "protein tyrosine kinase activity" evidence=IEA;IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0030154 "cell differentiation" evidence=IEP

UNIPROTKB|Q62662 Frk "Tyrosine-protein kinase FRK" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 34/69 (49%), Positives = 47/69 (68%)

Query:   121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
             GMT A+V+H +   YR+P P  CP + Y IM+ECW  +P +RPTFETL WKLED+F  + 
Sbjct:   437 GMTGAQVIHMLGQNYRLPQPSNCPEQFYSIMMECWNVEPKQRPTFETLHWKLEDYFEPDS 496

Query:   181 SDYKEASGY 189
             S Y + + +
Sbjct:   497 S-YSDTNNF 504

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1BPI3 FRK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 208 (78.3 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 44/98 (44%), Positives = 64/98 (65%)

Query:     1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
             W+FG IKR +AEK+LL  EN  GAFLIR+SES+K D++LS   E     + ++       
Sbjct:   126 WFFGAIKRTDAEKQLLYSENQTGAFLIRESESQKGDFALSVLDEGVVKHYRIRRLDEGGF 185

Query:    58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
             F T++   +T++  E V HY+K +DGLCV L KPC+++
Sbjct:   186 FLTRRRTFSTLN--EFVSHYTKTSDGLCVKLGKPCLKI 221

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|P42685 FRK "Tyrosine-protein kinase FRK" [Homo sapiens (taxid:9606)]

 Score = 208 (78.3 bits), Expect = 3.9e-34, Sum P(2) = 3.9e-34
 Identities = 35/69 (50%), Positives = 49/69 (71%)

Query:   121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
             GMT A+V+  +   YR+P P  CP + Y+IMLECW  +P +RPTFETL+WKLED+F  + 
Sbjct:   436 GMTGAQVIQMLAQNYRLPQPSNCPQQFYNIMLECWNAEPKERPTFETLRWKLEDYFETDS 495

Query:   181 SDYKEASGY 189
             S Y +A+ +
Sbjct:   496 S-YSDANNF 503

GO:0005524 "ATP binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0005622 "intracellular" evidence=TAS

GO:0008285 "negative regulation of cell proliferation" evidence=TAS

MGI|MGI:103265 Frk "fyn-related kinase" [Mus musculus (taxid:10090)]

 Score = 200 (75.5 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
 Identities = 43/98 (43%), Positives = 63/98 (64%)

Query:     1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
             W+FG IKR +AEK+LL  EN  GAFLIR+SES+K D+SLS   E     + ++       
Sbjct:   123 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 182

Query:    58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
             F T++   +T++  E V +Y+  +DGLCV L KPC+++
Sbjct:   183 FLTRRKVFSTLN--EFVNYYTTTSDGLCVKLEKPCLKI 218

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|J9NY14 FRK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 206 (77.6 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
 Identities = 45/98 (45%), Positives = 62/98 (63%)

Query:     1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
             W+FG IKR EAEK+LL   N  GAFLIR+SES+K D++LS   E     + ++       
Sbjct:   120 WFFGAIKRTEAEKQLLYSGNQTGAFLIRESESQKGDFALSVLDERVVKHYRIRRMDEGEF 179

Query:    58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
             F +QK    T++  E V HY+K +DGLCV L KPC+++
Sbjct:   180 FLSQKRTFPTLN--EFVSHYTKTSDGLCVQLGKPCLKI 215

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|F1PR52 FRK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 206 (77.6 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
 Identities = 45/98 (45%), Positives = 62/98 (63%)

Query:     1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
             W+FG IKR EAEK+LL   N  GAFLIR+SES+K D++LS   E     + ++       
Sbjct:   120 WFFGAIKRTEAEKQLLYSGNQTGAFLIRESESQKGDFALSVLDERVVKHYRIRRMDEGEF 179

Query:    58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
             F +QK    T++  E V HY+K +DGLCV L KPC+++
Sbjct:   180 FLSQKRTFPTLN--EFVSHYTKTSDGLCVQLGKPCLKI 215

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	189
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-35
cd10370	96	cd10370, SH2_Src_Src42, Src homology 2 (SH2) domai	1e-34
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-32
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	2e-29
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	2e-23
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	7e-23
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	8e-23
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-22
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-21
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-20
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-20
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-20
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-19
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-19
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-19
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-18
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-16
cd10367	101	cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain	5e-16
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-15
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-15
cd10362	101	cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain	3e-15
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-15
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-15
pfam00017	77	pfam00017, SH2, SH2 domain	6e-15
cd10363	104	cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain	1e-14
cd10371	100	cd10371, SH2_Src_Blk, Src homology 2 (SH2) domain	3e-14
smart00252	84	smart00252, SH2, Src homology 2 domains	3e-14
cd10419	101	cd10419, SH2_Src_Fyn_isoform_b_like, Src homology	6e-14
cd10364	101	cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain	1e-13
cd10366	101	cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain	2e-13
cd10368	101	cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain	2e-13
cd10365	101	cd10365, SH2_Src_Src, Src homology 2 (SH2) domain	2e-13
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	3e-13
cd10418	101	cd10418, SH2_Src_Fyn_isoform_a_like, Src homology	9e-13
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-12
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-12
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-12
cd10360	79	cd10360, SH2_Srm, Src homology 2 (SH2) domain foun	3e-12
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-12
cd10344	104	cd10344, SH2_SLAP, Src homology 2 domain found in	3e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	7e-12
cd09938	104	cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src	1e-11
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-11
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-11
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-11
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-11
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	6e-11
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	7e-11
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	9e-11
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	9e-11
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-10
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-10
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-10
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-10
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	3e-10
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	4e-10
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-10
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-10
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	9e-10
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	9e-10
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-09
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	2e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-09
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-09
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	5e-09
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	9e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-08
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-08
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-08
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	3e-08
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	5e-08
cd10408	97	cd10408, SH2_Nck1, Src homology 2 (SH2) domain fou	5e-08
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	8e-08
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-07
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-07
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-07
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	3e-07
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-07
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	5e-07
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-07
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	6e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-07
cd09934	104	cd09934, SH2_Tec_family, Src homology 2 (SH2) doma	8e-07
cd10397	106	cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain	1e-06
cd10402	105	cd10402, SH2_C-SH2_Zap70, C-terminal Src homology	1e-06
cd09926	106	cd09926, SH2_CRK_like, Src homology 2 domain found	2e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-06
cd10401	99	cd10401, SH2_C-SH2_Syk_like, C-terminal Src homolo	2e-06
cd10392	98	cd10392, SH2_SHF, Src homology 2 domain found in S	2e-06
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	6e-06
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	7e-06
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	9e-06
cd10398	106	cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain	1e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-05
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	2e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-05
cd10409	98	cd10409, SH2_Nck2, Src homology 2 (SH2) domain fou	4e-05
cd10391	98	cd10391, SH2_SHE, Src homology 2 domain found in S	4e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	5e-05
cd10340	99	cd10340, SH2_N-SH2_SHP_like, N-terminal Src homolo	5e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-05
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	6e-05
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	7e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	7e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	8e-05
cd10358	100	cd10358, SH2_PTK6_Brk, Src homology 2 domain found	8e-05
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-04
cd09944	108	cd09944, SH2_Grb7_family, Src homology 2 (SH2) dom	1e-04
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-04
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	2e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-04
cd10343	103	cd10343, SH2_SHIP, Src homology 2 (SH2) domain fou	2e-04
cd10387	100	cd10387, SH2_SOCS6, Src homology 2 (SH2) domain fo	2e-04
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	3e-04
cd10388	101	cd10388, SH2_SOCS7, Src homology 2 (SH2) domain fo	3e-04
cd10412	97	cd10412, SH2_SH2B3, Src homology 2 (SH2) domain fo	4e-04
cd10396	108	cd10396, SH2_Tec_Itk, Src homology 2 (SH2) domain	5e-04
cd09923	81	cd09923, SH2_SOCS_family, Src homology 2 (SH2) dom	8e-04
cd10337	136	cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in	0.001
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	0.001
cd10389	97	cd10389, SH2_SHB, Src homology 2 domain found in S	0.001
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.001
cd10346	97	cd10346, SH2_SH2B_family, Src homology 2 (SH2) dom	0.001
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	0.002
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	0.003
cd10390	98	cd10390, SH2_SHD, Src homology 2 domain found in S	0.003
cd10410	97	cd10410, SH2_SH2B1, Src homology 2 (SH2) domain fo	0.004
cd10349	77	cd10349, SH2_SH2D2A_SH2D7, Src homology 2 domain f	0.004

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  124 bits (313), Expect = 2e-35
 Identities = 45/55 (81%), Positives = 48/55 (87%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GMTNAEVL QV+ GYRMPCPPGCP  LYDIML+CW +DP  RPTFETLQWKLEDF
Sbjct: 207 GMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|198233 cd10370, SH2_Src_Src42, Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)

 Score =  117 bits (294), Expect = 1e-34
 Identities = 63/96 (65%), Positives = 69/96 (71%), Gaps = 9/96 (9%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL--- 57
          WYFGKIKRIEAEKKLLLPEN+HGAFLIRDSESR NDYSLS   R    +K    R L   
Sbjct: 5  WYFGKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLS--VRDGDTVKHYRIRQLDEG 62

Query: 58 --FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
            F  ++    T+   ELVEHYSKD+DGLCVNLRKP
Sbjct: 63 GFFIARRTTFRTLQ--ELVEHYSKDSDGLCVNLRKP 96

Src42 is a member of the Src non-receptor type tyrosine kinase family of proteins. The integration of receptor tyrosine kinase-induced RAS and Src42 signals by Connector eNhancer of KSR (CNK) as a two-component input is essential for RAF activation in Drosophila. Src42 is present in a wide variety of organisms including: California sea hare, pea aphid, yellow fever mosquito, honey bee, Panamanian leafcutter ant, and sea urchin. Src42 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  115 bits (291), Expect = 4e-32
 Identities = 39/55 (70%), Positives = 43/55 (78%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GMTN EVL QVE GYRMP PP CP  LYD+ML+CW KDP +RPTFE LQ  LED+
Sbjct: 207 GMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score =  104 bits (262), Expect = 2e-29
 Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 10/99 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           W+FGKIKR +AEK LL P N  G FLIR+SE+    YSLS           +K    R L
Sbjct: 5   WFFGKIKRKDAEKLLLAPGNPRGTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIRKL 64

Query: 58  -----FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
                + T +A   T+   ELV+HYSKDADGLC  L  P
Sbjct: 65  DNGGYYITTRATFPTLQ--ELVQHYSKDADGLCCRLTVP 101

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 88.8 bits (220), Expect = 2e-23
 Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 5/94 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
          W+FG IKR +AEK+LL  EN  GAFLIR+SES+K ++SLS         + ++       
Sbjct: 5  WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGEFSLSVLDGGVVKHYRIRRLDEGGF 64

Query: 58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
          F T++   +T++  E V +Y+  +DGLCV L KP
Sbjct: 65 FLTRRKTFSTLN--EFVNYYTTTSDGLCVKLGKP 96

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 91.6 bits (227), Expect = 7e-23
 Identities = 36/55 (65%), Positives = 42/55 (76%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GM N EVL QVE GYRMPCP  CP  L+++ML+CW KDP +RPTFE LQ  LED+
Sbjct: 206 GMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLEDY 260

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 91.4 bits (228), Expect = 8e-23
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           GM+N EVL  +E GYR+P P  CP  LY++ML+CW  DP  RPTF  L   L
Sbjct: 207 GMSNEEVLELLEDGYRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 91.3 bits (226), Expect = 1e-22
 Identities = 38/57 (66%), Positives = 44/57 (77%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT
Sbjct: 206 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 262

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 87.2 bits (216), Expect = 3e-21
 Identities = 31/55 (56%), Positives = 38/55 (69%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GMTN EV+  +E GYRMP P  CP  LY++M  CW + P +RPTFE L+  LEDF
Sbjct: 206 GMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 84.8 bits (210), Expect = 2e-20
 Identities = 28/55 (50%), Positives = 37/55 (67%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GM N EV  Q+  GYRMPCP  CP  +Y IMLECW  +P  RP+F+ L+ +L++ 
Sbjct: 207 GMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 84.1 bits (209), Expect = 5e-20
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
            GM+N EVL  +++GYR+P PP CPP LYD+ML+CW +DP  RPTF  L   L
Sbjct: 205 PGMSNEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 83.6 bits (206), Expect = 7e-20
 Identities = 35/55 (63%), Positives = 41/55 (74%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GM N EVL QVE GYRMPCP GCP  L+++M  CW KDP +RPTFE +Q  LED+
Sbjct: 206 GMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 30/52 (57%), Positives = 37/52 (71%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           GM+NAEVL  ++ GYR+P PP CPP LY +ML+CW +DP  RPTF  L   L
Sbjct: 207 GMSNAEVLEYLKKGYRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 81.0 bits (201), Expect = 6e-19
 Identities = 27/54 (50%), Positives = 34/54 (62%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G++N EVL  +  GYR+P P  CP  LY++ML CW  DP  RPTF  L  +LE
Sbjct: 209 PGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 81.2 bits (201), Expect = 6e-19
 Identities = 24/49 (48%), Positives = 28/49 (57%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G M  AEV+  +E G R+P P  CP  +Y IML CW   P  RPTF  L
Sbjct: 200 GEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 80.1 bits (197), Expect = 2e-18
 Identities = 30/55 (54%), Positives = 38/55 (69%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GM+N EV+  +E GYRMP P  CP  LY+IM+ CW   P +RPTFE +Q  L+DF
Sbjct: 206 GMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 76.7 bits (189), Expect = 3e-17
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query: 125 AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            +V+  VE GYRM  P GCPP +Y +M +CW  DP KRPTF+ L+ +L   
Sbjct: 206 KDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 75.2 bits (185), Expect = 1e-16
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP KRP F  L+ +L D    E
Sbjct: 211 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|198230 cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain found in Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog, Fgr

 Score = 69.5 bits (170), Expect = 5e-16
 Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 12/100 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           WYFGKI R +AE++LL P N  GAFLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 5   WYFGKIGRKDAERQLLSPGNPRGAFLIRESETTKGAYSLSIRDWDQNRGDHVKHYKIRKL 64

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
            TG   + T +A   T+   ELV+HY +  DGLC  L  P
Sbjct: 65  DTG-GYYITTRAQFDTVQ--ELVQHYMEVNDGLCYLLTAP 101

Fgr is a member of the Src non-receptor type tyrosine kinase family of proteins. The protein contains N-terminal sites for myristoylation and palmitoylation, a PTK domain, and SH2 and SH3 domains which are involved in mediating protein-protein interactions with phosphotyrosine-containing and proline-rich motifs, respectively. Fgr is expressed in B-cells and myeloid cells, localizes to plasma membrane ruffles, and functions as a negative regulator of cell migration and adhesion triggered by the beta-2 integrin signal transduction pathway. Multiple alternatively spliced variants, encoding the same protein, have been identified Fgr has been shown to interact with Wiskott-Aldrich syndrome protein. Fgr has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 72.4 bits (177), Expect = 1e-15
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GM+N++V+  ++ GYRMP    CP  LYDIM  CW +   +RPTF+ LQ  L+DF
Sbjct: 207 GMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 71.2 bits (174), Expect = 3e-15
 Identities = 23/49 (46%), Positives = 33/49 (67%)

Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           +V+ +VE GY+M  P GCPP +YD+M +CW  D   RP+F  L+ +LE 
Sbjct: 207 DVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|198225 cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain in lymphocyte cell kinase (Lck)

 Score = 67.6 bits (165), Expect = 3e-15
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 12/100 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           W+F  + R +AE++LL P N HG+FLIR+SE+    +SLS         E  +      +
Sbjct: 5   WFFKNLSRNDAERQLLAPGNTHGSFLIRESETTAGSFSLSVRDFDQNQGEVVKHYKIRNL 64

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
             G   + + +     +H  ELV HY+  +DGLC  L +P
Sbjct: 65  DNG-GFYISPRITFPGLH--ELVRHYTNASDGLCTRLSRP 101

Lck is a member of the Src non-receptor type tyrosine kinase family of proteins. It is expressed in the brain, T-cells, and NK cells. The unique domain of Lck mediates its interaction with two T-cell surface molecules, CD4 and CD8. It associates with their cytoplasmic tails on CD4 T helper cells and CD8 cytotoxic T cells to assist signaling from the T cell receptor (TCR) complex. When the T cell receptor is engaged by the specific antigen presented by MHC, Lck phosphorylase the intracellular chains of the CD3 and zeta-chains of the TCR complex, allowing ZAP-70 to bind them. Lck then phosphorylates and activates ZAP-70, which in turn phosphorylates Linker of Activated T cells (LAT), a transmembrane protein that serves as a docking site for proteins including: Shc-Grb2-SOS, PI3K, and phospholipase C (PLC). The tyrosine phosphorylation cascade culminates in the intracellular mobilization of a calcium ions and activation of important signaling cascades within the lymphocyte, including the Ras-MEK-ERK pathway, which goes on to activate certain transcription factors such as NFAT, NF-kappaB, and AP-1. These transcription factors regulate the production cytokines such as Interleukin-2 that promote long-term proliferation and differentiation of the activated lymphocytes. The N-terminal tail of Lck is myristoylated and palmitoylated and it tethers the protein to the plasma membrane of the cell. Lck also contains a SH3 domain, a SH2 domain, and a C-terminal tyrosine kinase domain. Lck has 2 phosphorylation sites, the first an autophosphorylation site that is linked to activation of the protein and the second which is phosphorylated by Csk, which inhibits it. Lck is also inhibited by SHP-1 dephosphorylation and by Cbl ubiquitin ligase, which is part of the ubiquitin-mediated pathway. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 71.0 bits (174), Expect = 4e-15
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 117 FGSG---GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G     GM+N +   ++E GYRMP P  CP  +Y +ML+CW  DP  RP+F  +  +L+
Sbjct: 191 LGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 70.8 bits (174), Expect = 4e-15
 Identities = 25/54 (46%), Positives = 34/54 (62%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
             M+N +V+  VE GYR+P P  CP  LY +ML+CW KD  +RPTF  +   L+
Sbjct: 210 WDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 66.1 bits (162), Expect = 6e-15
 Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF--CLKMTTGRSLF 58
          WY GKI R EAE+ LLL     G FL+R+SES+  DY+LS             +     +
Sbjct: 1  WYHGKISREEAER-LLLNPKPDGTFLVRESESKPGDYTLSVRDDGRVKHYRIQSLDNGGY 59

Query: 59 ETQKAGRTTIHYPELVEHY 77
               G T    PELVEHY
Sbjct: 60 -YISGGVTFNSLPELVEHY 77

Length = 77

>gnl|CDD|198226 cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain found in HCK

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 10/101 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYK-RSSFCLKMTTGRSL 57
           W+F  I R +AE++LL P N  G+F+IRDSE+ K  YSLS  +Y  +    +K    R+L
Sbjct: 5   WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPQHGDTVKHYKIRTL 64

Query: 58  -----FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCV 93
                + + ++  +T+   ELV+HY K  DGLC  L  PC+
Sbjct: 65  DNGGFYISPRSTFSTLQ--ELVDHYKKGNDGLCQKLSVPCM 103

HCK is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in hemopoietic cells. HCK is proposed to couple the Fc receptor to the activation of the respiratory burst. It may also play a role in neutrophil migration and in the degranulation of neutrophils. It has two different translational starts that have different subcellular localization. HCK has been shown to interact with BCR gene, ELMO1 Cbl gene, RAS p21 protein activator 1, RASA3, Granulocyte colony-stimulating factor receptor, ADAM15 and RAPGEF1. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. HCK has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198234 cd10371, SH2_Src_Blk, Src homology 2 (SH2) domain found in B lymphoid kinase (Blk)

 Score = 65.0 bits (158), Expect = 3e-14
 Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 5/96 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
           W+F  I R +AE++LL P N  G+FLIR+SES K  +SLS  +       +K    RSL 
Sbjct: 5   WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDVTTQGEVVKHYKIRSLD 64

Query: 59  ETQKAGRTTIHYPE---LVEHYSKDADGLCVNLRKP 91
                    I +P    LV+HYSK  DGLC  L  P
Sbjct: 65  NGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLP 100

Blk is a member of the Src non-receptor type tyrosine kinase family of proteins. Blk is expressed in the B-cells. Unlike most other Src members Blk lacks cysteine residues in the SH4 domain that undergo palmitylation. Blk is required for the development of IL-17-producing gamma-delta T cells. Furthermore, Blk is expressed in lymphoid precursors and, in this capacity, plays a role in regulating thymus cellularity during ontogeny. Blk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 100

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 64.6 bits (158), Expect = 3e-14
 Identities = 34/96 (35%), Positives = 40/96 (41%), Gaps = 27/96 (28%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-------------EYKRSSF 47
          WY G I R EAEK L       G FL+RDSES   DY LS               +   F
Sbjct: 3  WYHGFISREEAEKLLK--NEGDGDFLVRDSESSPGDYVLSVRVKGKVKHYRIRRNEDGKF 60

Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG 83
           L    G   F        ++   ELVEHY K++ G
Sbjct: 61 YL---EGGRKFP-------SL--VELVEHYQKNSLG 84

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|198282 cd10419, SH2_Src_Fyn_isoform_b_like, Src homology 2 (SH2) domain found in Fyn isoform b like proteins

 Score = 64.3 bits (156), Expect = 6e-14
 Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 12/97 (12%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
          WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 5  WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 64

Query: 52 TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNL 88
            G   + T +A   T+   +LV+HYS+ ADGLC NL
Sbjct: 65 DNG-GYYITTRAQFETLQ--QLVQHYSEKADGLCFNL 98

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform b type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198227 cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain found in Lyn

 Score = 63.5 bits (154), Expect = 1e-13
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           W+F  I R +AE++LL P N  GAFLIR+SE+ K  YSLS      +    +K    RSL
Sbjct: 5   WFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSYSLSVRDYDPQHGDVIKHYKIRSL 64

Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKP 91
                     I +P   ++++HY K +DGLC  L K 
Sbjct: 65  DNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKA 101

Lyn is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in the hematopoietic cells, in neural tissues, liver, and adipose tissue. There are two alternatively spliced forms of Lyn. Lyn plays an inhibitory role in myeloid lineage proliferation. Following engagement of the B cell receptors, Lyn undergoes rapid phosphorylation and activation, triggering a cascade of signaling events mediated by Lyn phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAM) of the receptor proteins, and subsequent recruitment and activation of other kinases including Syk, phospholipase C2 (PLC2) and phosphatidyl inositol-3 kinase. These kinases play critical roles in proliferation, Ca2+ mobilization and cell differentiation. Lyn plays an essential role in the transmission of inhibitory signals through phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based inhibitory motifs (ITIM) in regulatory proteins such as CD22, PIR-B and FC RIIb1. Their ITIM phosphorylation subsequently leads to recruitment and activation of phosphatases such as SHIP-1 and SHP-1 which further down modulate signaling pathways, attenuate cell activation and can mediate tolerance. Lyn also plays a role in the insulin signaling pathway. Activated Lyn phosphorylates insulin receptor substrate 1 (IRS1) leading to an increase in translocation of Glut-4 to the cell membrane and increased glucose utilization. It is the primary Src family member involved in signaling downstream of the B cell receptor. Lyn plays an unusual, 2-fold role in B cell receptor signaling; it is essential for initiation of signaling but is also later involved in negative regulation of the signal. Lyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198229 cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain found in Yes

 Score = 63.1 bits (153), Expect = 2e-13
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 10/96 (10%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-----EYKRSS---FCLKMT 52
          WYFGK+ R +AE+ LL P N  G FL+R+SE+ K  YSLS     E +  +   + ++  
Sbjct: 5  WYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKIRKL 64

Query: 53 TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNL 88
               + T +A   T+   +LV+HY++ ADGLC  L
Sbjct: 65 DNGGYYITTRAQFDTLQ--KLVKHYTEHADGLCHKL 98

Yes is a member of the Src non-receptor type tyrosine kinase family of proteins. Yes is the cellular homolog of the Yamaguchi sarcoma virus oncogene. In humans it is encoded by the YES1 gene which maps to chromosome 18 and is in close proximity to thymidylate synthase. A corresponding Yes pseudogene has been found on chromosome 22. YES1 has been shown to interact with Janus kinase 2, CTNND1,RPL10, and Occludin. Yes1 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198231 cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain found in Fyn

 Score = 63.1 bits (153), Expect = 2e-13
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 5   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 64

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
             G   + T +A   T+   +LV+HYS+ A+GLC  L   
Sbjct: 65  DNG-GYYITTRAQFETLQ--QLVQHYSETANGLCKVLIVT 101

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198228 cd10365, SH2_Src_Src, Src homology 2 (SH2) domain found in tyrosine kinase sarcoma (Src)

 Score = 63.1 bits (153), Expect = 2e-13
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 10/96 (10%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
          WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 5  WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64

Query: 53 TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNL 88
               + T +    ++   +LV +YSK ADGLC  L
Sbjct: 65 DSGGFYITSRTQFNSLQ--QLVAYYSKHADGLCHRL 98

Src is a member of the Src non-receptor type tyrosine kinase family of proteins. Src is thought to play a role in the regulation of embryonic development and cell growth. Members here include v-Src and c-Src. v-Src lacks the C-terminal inhibitory phosphorylation site and is therefore constitutively active as opposed to normal cellular src (c-Src) which is only activated under certain circumstances where it is required (e.g. growth factor signaling). v-Src is an oncogene whereas c-Src is a proto-oncogene. c-Src consists of three domains, an N-terminal SH3 domain, a central SH2 domain and a tyrosine kinase domain. The SH2 and SH3 domains work together in the auto-inhibition of the kinase domain. The phosphorylation of an inhibitory tyrosine near the c-terminus of the protein produces a binding site for the SH2 domain which then facilitates binding of the SH3 domain to a polyproline site within the linker between the SH2 domain and the kinase domain. Binding of the SH3 domain inactivates the enzyme. This allows for multiple mechanisms for c-Src activation: dephosphorylation of the C-terminal tyrosine by a protein tyrosine phosphatase, binding of the SH2 domain by a competitive phospho-tyrosine residue, or competitive binding of a polyproline binding site to the SH3 domain. Unlike most other Src members Src lacks cysteine residues in the SH4 domain that undergo palmitylation. Serine and threonine phosphorylation sites have also been identified in the unique domains of Src and are believed to modulate protein-protein interactions or regulate catalytic activity. Alternatively spliced forms of Src, which contain 6- or 11-amino acid insertions in the SH3 domain, are expressed in CNS neurons. c-Src has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score = 62.3 bits (152), Expect = 3e-13
 Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 16/98 (16%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+ GKI R EAE+ L  PE+  G FL+R+S +   DY+L      SF  K+   R +   
Sbjct: 5  WFHGKISREEAERLLQPPED--GLFLVRESTNYPGDYTLC----VSFEGKVEHYRVI--- 55

Query: 61 QKAGRTTIHYPE-------LVEHYSKDADGLCVNLRKP 91
           + G+ TI   E       LVEHY+KDADGLC  L KP
Sbjct: 56 YRNGKLTIDEEEYFENLIQLVEHYTKDADGLCTRLVKP 93

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198281 cd10418, SH2_Src_Fyn_isoform_a_like, Src homology 2 (SH2) domain found in Fyn isoform a like proteins

 Score = 61.2 bits (148), Expect = 9e-13
 Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 5   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 64

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
             G   + T +A   T+   +LV+HYS+ A GLC  L  P
Sbjct: 65  DNG-GYYITTRAQFETLQ--QLVQHYSERAAGLCCRLVVP 101

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform a type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 63.8 bits (155), Expect = 1e-12
 Identities = 26/52 (50%), Positives = 32/52 (61%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           M+  EV   VE GYRM  P GCP  +Y +M  CW  +P KRP+F  L+ KLE
Sbjct: 201 MSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 64.1 bits (156), Expect = 1e-12
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E GYRM  P GCPP++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 208 GIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 63.4 bits (154), Expect = 2e-12
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM   EV   +E G RM CP  CPP +YD+M  CW     +RP F  ++ +L +++
Sbjct: 201 GMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|198223 cd10360, SH2_Srm, Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (srm)

 Score = 59.6 bits (144), Expect = 3e-12
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
          WYF  I R +A++ LL P N+ GAFLIR SES    YSLS   + K   + + M    SL
Sbjct: 2  WYFSGISRTQAQQLLLSPPNEPGAFLIRPSESSLGGYSLSVRAQAKVCHYRICMAPSGSL 61

Query: 58 F 58
          +
Sbjct: 62 Y 62

Srm is a nonreceptor protein kinase that has two SH2 domains, a SH3 domain, and a kinase domain with a tyrosine residue for autophosphorylation. However it lacks an N-terminal glycine for myristoylation and a C-terminal tyrosine which suppresses kinase activity when phosphorylated. Srm is most similar to members of the Tec family who other members include: Tec, Btk/Emb, and Itk/Tsk/Emt. However Srm differs in its N-terminal unique domain it being much smaller than in the Tec family and is closer to Src. Srm is thought to be a new family of nonreceptor tyrosine kinases that may be redundant in function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 79

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 63.1 bits (153), Expect = 3e-12
 Identities = 26/52 (50%), Positives = 30/52 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           GMTN +   QVE GYRM CP  CP  +Y +M  CW   P  RP F  LQ +L
Sbjct: 197 GMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|198207 cd10344, SH2_SLAP, Src homology 2 domain found in Src-like adaptor proteins

 Score = 59.8 bits (145), Expect = 3e-12
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           W F  + R +AE+ L+LP N  G+FLIR+SE+R+  YSLS   R S          +F  
Sbjct: 12  WLFEGLSREKAEELLMLPGNQVGSFLIRESETRRGCYSLSVRHRGSQSRDSVKHYRIFRL 71

Query: 61  QKAG-----RTTIH-YPELVEHYSKDADGLC 85
                    R T     ++V HYS+ ADGLC
Sbjct: 72  DNGWFYISPRLTFQCLEDMVNHYSESADGLC 102

SLAP belongs to the subfamily of adapter proteins that negatively regulate cellular signaling initiated by tyrosine kinases. It has a myristylated N-terminus, SH3 and SH2 domains with high homology to Src family tyrosine kinases, and a unique C-terminal tail, which is important for c-Cbl binding. SLAP negatively regulates platelet-derived growth factor (PDGF)-induced mitogenesis in fibroblasts and regulates F-actin assembly for dorsal ruffles formation. c-Cbl mediated SLAP inhibition towards actin remodeling. Moreover, SLAP enhanced PDGF-induced c-Cbl phosphorylation by SFK. In contrast, SLAP mitogenic inhibition was not mediated by c-Cbl, but it rather involved a competitive mechanism with SFK for PDGF-receptor (PDGFR) association and mitogenic signaling. Accordingly, phosphorylation of the Src mitogenic substrates Stat3 and Shc were reduced by SLAP. Thus, we concluded that SLAP regulates PDGFR signaling by two independent mechanisms: a competitive mechanism for PDGF-induced Src mitogenic signaling and a non-competitive mechanism for dorsal ruffles formation mediated by c-Cbl. SLAP is a hematopoietic adaptor containing Src homology (SH)3 and SH2 motifs and a unique carboxy terminus. Unlike c-Src, SLAP lacks a tyrosine kinase domain. Unlike c-Src, SLAP does not impact resorptive function of mature osteoclasts but induces their early apoptosis. SLAP negatively regulates differentiation of osteoclasts and proliferation of their precursors. Conversely, SLAP decreases osteoclast death by inhibiting activation of caspase 3. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 62.2 bits (151), Expect = 7e-12
 Identities = 22/47 (46%), Positives = 32/47 (68%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           M+N +V+  +E GYR+P P  CP  L+ +ML+CW KD  +RP FE +
Sbjct: 213 MSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI 259

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|198191 cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70) and Spleen tyrosine kinase (Syk) proteins

 Score = 58.6 bits (142), Expect = 1e-11
 Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          +++G I R EAE+ L L     G FL+R S      Y LS      F    T  R L  T
Sbjct: 3  FFYGSITREEAEEYLKLAGMSDGLFLLRQSLRSLGGYVLSVCHGRKF-HHYTIERQLNGT 61

Query: 61 QK--AGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
               G+      EL E++S D DGL   LRKPC
Sbjct: 62 YAIAGGKAHCGPAELCEYHSTDLDGLVCLLRKPC 95

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the N-terminus SH2 domains of both Syk and Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 61.4 bits (149), Expect = 1e-11
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            + N EVL  V  G R+  P  CP ++Y +M  CW +DP +RPTF+ +Q  L+
Sbjct: 216 ALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 60.7 bits (147), Expect = 2e-11
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           M+N +V++ +E  YR+P P  CP  L+ +ML+CW KD   RP F  +
Sbjct: 215 MSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQI 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 60.3 bits (146), Expect = 2e-11
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+  +V+  VE G+R+P P  CP  L+ +ML+CW K+  +RP F
Sbjct: 212 MSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRF 255

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 59.8 bits (145), Expect = 4e-11
 Identities = 19/49 (38%), Positives = 26/49 (53%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
              +N+EV+  V  GYR+  P   P  +Y IM  CW + P  RP F+ L
Sbjct: 203 ERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 59.2 bits (143), Expect = 6e-11
 Identities = 18/55 (32%), Positives = 31/55 (56%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           M   EV+  +E G R+ CP  CPP +Y +M +CW+     RP F  ++ ++  ++
Sbjct: 202 MKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 59.5 bits (144), Expect = 7e-11
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           GM + EV++ V  G  + CP  CP  LY++M  CW K P  RP+F ++   L+
Sbjct: 235 GMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 58.9 bits (142), Expect = 9e-11
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           G +N EV+  V     +PC   CPPR+Y +M ECW + P +RP F+ +  +L
Sbjct: 229 GFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 59.0 bits (143), Expect = 9e-11
 Identities = 20/52 (38%), Positives = 28/52 (53%)

Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           E+   ++ GYR+  P  CP  L+ +M  CW  DP +RP+F  L   L DF  
Sbjct: 227 EMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 127 VLHQVE---HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           V H +E   +  R+P PPGCP  +Y IM ECW  DP +RP+F  L  ++E  
Sbjct: 232 VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 58.4 bits (141), Expect = 1e-10
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+N EV+  +  G+R+P P  CP  +Y +ML+CW +D  +RP F
Sbjct: 214 MSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRF 257

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 122 MTNAEVLHQVEHGYR-------MPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           +T+ +V+    H +R       +P PP CP  +Y++MLECW +D   RPTF  +
Sbjct: 237 LTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREI 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           G++ +++L +++  G R+  P  CP  +Y++ML+CW  +P  RPTF  L+  L
Sbjct: 203 GLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 54.0 bits (130), Expect = 3e-10
 Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 25/90 (27%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-------------EYKRSSF 47
          W+ G I R EAE+  LL     G FL+R+S S   DY LS             E     +
Sbjct: 2  WFHGSISREEAER--LLRGKPDGTFLVRESSSEPGDYVLSVRSGDGKVKHYLIERNEGGY 59

Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHY 77
           L   +GR+ F +          PELVEHY
Sbjct: 60 YLLGGSGRT-FPS---------LPELVEHY 79

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 53.9 bits (130), Expect = 4e-10
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRS--L 57
          WY G I R  AE   LL    +G+FL+R+SES    YS+S  Y    +  +++      +
Sbjct: 5  WYHGPISRNAAE--YLLSSGINGSFLVRESESSPGQYSISLRYDGRVYHYRISEDSDGKV 62

Query: 58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
          + TQ+    T+   ELV H+SK+ADGL   LR P
Sbjct: 63 YVTQEHRFNTL--AELVHHHSKNADGLITTLRYP 94

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 57.1 bits (138), Expect = 4e-10
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G+ N E+   + HG R+  P  C   LYD+M  CW  DP  RPTF  L+  LE+
Sbjct: 218 GVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 57.1 bits (138), Expect = 5e-10
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           G +N EV+  +     +PCP  CP R+Y +M+ECW + P +RP F+ +  +L
Sbjct: 229 GFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 57.0 bits (138), Expect = 5e-10
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G M    +L  ++ G R+P PP CP  +YD+M  CW  +P  RP+F  L   ++
Sbjct: 228 GQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 55.9 bits (135), Expect = 9e-10
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G TN EV+  V  G R+  P GCP  +Y IM +CW   P  RP F T+  +++ 
Sbjct: 224 GRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 53.2 bits (128), Expect = 9e-10
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 1  WYFGKIKRIEAEKKL-LLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFE 59
          WY G I RIEAE  L    E   G++L+R+SES K DYSLS  K +   + M   R+   
Sbjct: 3  WYHGAITRIEAESLLRPCKE---GSYLVRNSESTKQDYSLS-LKSAKGFMHMRIQRNETG 58

Query: 60 TQKAGRTTIHY---PELVEHYS 78
              G+ +  +   PE++ HY 
Sbjct: 59 QYILGQFSRPFETIPEMIRHYC 80

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           ++N +    +E G R+PCP  CP  +Y +M  CW  DP +RP+F T+  +L
Sbjct: 200 LSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+ GKI R EAE+ +L+ +   GAFLIR+SES   D+SLS
Sbjct: 5  WFHGKISRAEAEE-ILMNQRPDGAFLIRESESSPGDFSLS 43

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 54.9 bits (132), Expect = 2e-09
 Identities = 19/53 (35%), Positives = 34/53 (64%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G+ N+E+ + +  G R+  PP C   +Y++M +CW  +P  RP+F+ L+ +LE
Sbjct: 218 GVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 54.9 bits (132), Expect = 2e-09
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G MT   ++  +E G R+P PP CP  +Y +M +CW   P KR TF+ L
Sbjct: 228 GQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 54.7 bits (132), Expect = 3e-09
 Identities = 21/54 (38%), Positives = 30/54 (55%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N EVL  V  G  +  P  CP +L ++M  CW  +P  RPTF  +   L+D
Sbjct: 224 GLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 51.0 bits (122), Expect = 5e-09
 Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 16/86 (18%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          WY+G+I R +AE  LL      G FLIRDSES   DYS+S        LK       F+ 
Sbjct: 3  WYYGRITRHQAET-LLNEHGHEGDFLIRDSESNPGDYSVS--------LKAPGRNKHFKV 53

Query: 61 Q------KAGRTTIH-YPELVEHYSK 79
          Q        G+   H   ELVEHY K
Sbjct: 54 QVVDNVYCIGQRKFHTMDELVEHYKK 79

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 54.1 bits (130), Expect = 6e-09
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query: 131 VEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           ++ GYRM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 330 IKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 53.2 bits (128), Expect = 9e-09
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G++N EV+  +  G  +  P  CP  +YDIML CW +DP +R   + +  +L+
Sbjct: 227 GLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 53.0 bits (127), Expect = 1e-08
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G MT   ++  +E G R+PCP  CP  +Y +M  CW  +   RPTF +L   L++ 
Sbjct: 225 QGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 134 GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GYRM  P  C   LY +M +CW + P +RPTF+ L
Sbjct: 250 GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQL 284

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 120 GGMTNAEVLHQVEHG-YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
            G+++ EVL++++ G   +P P GCP RLY +M  CW  +P  RP+F  L   L +
Sbjct: 220 YGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 22/67 (32%), Positives = 32/67 (47%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+   E+   +  G+RM  P  C   LY +M ECW   P +RPTF+ L   L+       
Sbjct: 239 GIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS 298

Query: 181 SDYKEAS 187
            +Y + S
Sbjct: 299 EEYLDLS 305

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 51.2 bits (122), Expect = 5e-08
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G+ N+E+   +  G R+  PP C   LY +M  CWL +P  RP+FETL+ +LE
Sbjct: 217 GVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|198271 cd10408, SH2_Nck1, Src homology 2 (SH2) domain found in Nck

 Score = 48.5 bits (115), Expect = 5e-08
 Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 20/88 (22%)

Query: 1  WYFGKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLS-----EYKRSSFCLKMTT- 53
          WY+GK+ R +AE  + L E  + G FLIRDSES  ND+S+S     + K     LK    
Sbjct: 3  WYYGKVTRHQAE--MALNERGNEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKECVY 60

Query: 54 --GRSLFETQKAGRTTIHYPELVEHYSK 79
            G+  F + +         ELVEHY K
Sbjct: 61 CIGQRKFSSME---------ELVEHYKK 79

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 50.5 bits (121), Expect = 8e-08
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           ++   +  G R+  P  CP  LY++ML CW   P  RPTF  L  ++E  F
Sbjct: 210 DITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 19/52 (36%), Positives = 32/52 (61%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           G +N +V+  + +   +PCP  CP  +Y +MLECW + P +RP F+ +  +L
Sbjct: 229 GYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +   L
Sbjct: 214 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 265

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           GMT AE+  ++  GYRM  P  C   +Y++M +CW   P +RP F  +  +L
Sbjct: 221 GMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQL 272

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 34/111 (30%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------------EYKRS 45
          W+ G +   EAEK LLL +   G+FL+R+S+S+  D+ LS               +  + 
Sbjct: 2  WFHGHLSGKEAEK-LLLEKGKPGSFLVRESQSKPGDFVLSVRTDDDKVTHIMIRCQGGKY 60

Query: 46 SFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSK----DADGLCVNLRKPC 92
                  G   F++           +LVEHY K    +  G  V+L++P 
Sbjct: 61 DVG-----GGEEFDSLT---------DLVEHYKKNPMVETSGTVVHLKQPL 97

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 49.2 bits (117), Expect = 3e-07
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +
Sbjct: 226 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 273

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE 166
           G + N++    V+ GY+M  P   PP +Y IM  CW  +P +RPTF 
Sbjct: 317 GILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFS 363

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 48.3 bits (115), Expect = 5e-07
 Identities = 20/55 (36%), Positives = 30/55 (54%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G   +++    ++ GYRM  P   P  +YDIM  CW  DP+KRPTF+ +   +  
Sbjct: 246 GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G + ++   ++++ GYRM  P      +YDIM++CW  +P KRP+F  L   +E     
Sbjct: 342 GMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLPS 400

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 48.1 bits (114), Expect = 6e-07
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+   E+   ++ G+RM  P  C   LY IM ECW   P +RPTF+ L   L+   T+  
Sbjct: 239 GIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298

Query: 181 SD 182
           +D
Sbjct: 299 TD 300

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 48.1 bits (114), Expect = 6e-07
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 198 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 257

Query: 165 FETL 168
           F  L
Sbjct: 258 FREL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 134 GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           GYRM  P  C   +Y++ML CW ++P KRPTF  +  +LE
Sbjct: 245 GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|198188 cd09934, SH2_Tec_family, Src homology 2 (SH2) domain found in Tec-like proteins

 Score = 45.1 bits (107), Expect = 8e-07
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS-------FCLKMTT 53
           WY G + R  AE  LL  E+  G F++R+S S K  Y++S + +         + +K   
Sbjct: 8   WYVGDMSRQRAES-LLKQEDKEGCFVVRNS-STKGLYTVSLFTKVPGSPHVKHYHIKQNA 65

Query: 54  GRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
               +  +K    TI  PEL+ ++  ++ GL   L+ P
Sbjct: 66  RSEFYLAEKHCFETI--PELINYHQHNSGGLATRLKYP 101

The Tec protein tyrosine kinase is the founding member of a family that includes Btk, Itk, Bmx, and Txk. The members have a PH domain, a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is involved in B-cell receptor signaling with mutations in Btk responsible for X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency (xid) in mice. Itk is involved in T-cell receptor signaling. Tec is expressed in both T and B cells, and is thought to function in activated and effector T lymphocytes to induce the expression of genes regulated by NFAT transcription factors. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198260 cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain found in Tec protein, Bruton's tyrosine kinase (Btk)

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 16/106 (15%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---------FCLKM 51
           WY   + R +AE+ LL  E   G F++RDS S+   Y++S + +S+         + +  
Sbjct: 8   WYSKNMTRSQAEQ-LLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSAGDPQGVIRHYVVCS 65

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC 97
           T     +  +K   +TI  PEL+ ++  +A GL   L+ P   VS 
Sbjct: 66  TPQSQYYLAEKHLFSTI--PELINYHQHNAAGLISRLKYP---VSS 106

A member of the Tec protein tyrosine kinase Btk is expressed in bone marrow, spleen, all hematopoietic cells except T lymphocytes and plasma cells where it plays a crucial role in B cell maturation and mast cell activation. Btk has been shown to interact with GNAQ, PLCG2, protein kinase D1, B-cell linker, SH3BP5, caveolin 1, ARID3A, and GTF2I. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is implicated in the primary immunodeficiency disease X-linked agammaglobulinemia (Bruton's agammaglobulinemia). The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. Two tyrosine phosphorylation (pY) sites have been identified in Btk: one located in the activation loop of the catalytic domain which regulates the transition between open (active) and closed (inactive) states and the other in its SH3 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198265 cd10402, SH2_C-SH2_Zap70, C-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70)

 Score = 44.9 bits (106), Expect = 1e-06
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 26/106 (24%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           WY G I R EAE++L       G FL+R+ +           +  ++ L +  G++++  
Sbjct: 12  WYHGSIARDEAERRLYSGAQPDGKFLLRERK-----------ESGTYALSLVYGKTVYHY 60

Query: 61  Q----KAGRTTIHYPE---------LVEHYSKDADGLCVNLRKPCV 93
           +    K+G+ +I  PE         LVE+     DGL   LR+ C 
Sbjct: 61  RIDQDKSGKYSI--PEGTKFDTLWQLVEYLKLKPDGLIFVLRESCP 104

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the C-terminus SH2 domains of Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 105

>gnl|CDD|198180 cd09926, SH2_CRK_like, Src homology 2 domain found in cancer-related signaling adaptor protein CRK

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC 48
          WYFG + R EA++  LL    HG FL+RDS +   DY LS  + S   
Sbjct: 9  WYFGPMSRQEAQE--LLQGQRHGVFLVRDSSTIPGDYVLSVSENSRVS 54

SH2 domain in the CRK proteins. CRKI (SH2-SH3) and CRKII (SH2-SH3-SH3) are splicing isoforms of the oncoprotein CRK. CRKs regulate transcription and cytoskeletal reorganization for cell growth and motility by linking tyrosine kinases to small G proteins. The SH2 domain of CRK associates with tyrosine-phosphorylated receptors or components of focal adhesions, such as p130Cas and paxillin. CRK transmits signals to small G proteins through effectors that bind its SH3 domain, such as C3G, the guanine-nucleotide exchange factor (GEF) for Rap1 and R-Ras, and DOCK180, the GEF for Rac6. The binding of p130Cas to the CRK-C3G complex activates Rap1, leading to regulation of cell adhesion, and activates R-Ras, leading to JNK-mediated activation of cell proliferation, whereas the binding of CRK DOCK180 induces Rac1-mediated activation of cellular migration. The activity of the different splicing isoforms varies greatly with CRKI displaying substantial transforming activity, CRKII less so, and phosphorylated CRKII with no biological activity whatsoever. CRKII has a linker region with a phosphorylated Tyr and an additional C-terminal SH3 domain. The phosphorylated Tyr creates a binding site for its SH2 domain which disrupts the association between CRK and its SH2 target proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G+   E+   +E G R+P PP C   +Y ++++CW+ D   RPTF+ L
Sbjct: 214 GIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|198264 cd10401, SH2_C-SH2_Syk_like, C-terminal Src homology 2 (SH2) domain found in Spleen tyrosine kinase (Syk) proteins

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 24/104 (23%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL--- 57
          W+ GKI R E+E+ LL+    +G FLIR+ ++    Y+L        CL +  G+ L   
Sbjct: 5  WFHGKISREESEQILLIGSKTNGKFLIRERDNN-GSYAL--------CL-LHDGKVLHYR 54

Query: 58 FETQKAGRTTIHYPE---------LVEHYSKDADGLCVNLRKPC 92
           +  K G+ +I  P+         LVEHYS   DGL   L +PC
Sbjct: 55 IDKDKTGKLSI--PDGKKFDTLWQLVEHYSYKPDGLLRVLTEPC 96

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the C-terminus SH2 domains of Syk. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198255 cd10392, SH2_SHF, Src homology 2 domain found in SH2 domain-containing adapter protein F (SHF)

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          WY G I R +AE  L L +    ++L+R+SE+ KND+SLS  K S   + M   R+    
Sbjct: 3  WYHGAISRTDAENLLRLCK--EASYLVRNSETSKNDFSLS-LKSSQGFMHMKLSRTKEHK 59

Query: 61 QKAGRTTIHY---PELVEHYS 78
             G+ +  +   PE++ HY+
Sbjct: 60 YVLGQNSPPFSSVPEIIHHYA 80

SHF is thought to play a role in PDGF-receptor signaling and regulation of apoptosis. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 46.1 bits (109), Expect = 3e-06
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF
Sbjct: 224 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 268

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query: 124 NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           + E   +++ G RM  P    P +Y IML+CW  +P  RPTF  L   L D
Sbjct: 282 DEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGD 332

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 45.4 bits (107), Expect = 6e-06
 Identities = 21/49 (42%), Positives = 26/49 (53%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   N E   +++ G RM  P    P +Y IML CW  DP +RPTF  L
Sbjct: 279 GVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSAL 327

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 45.0 bits (106), Expect = 7e-06
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   +E G R+P PP C   +Y IM++CW+ D   RP F  L   +++F  M
Sbjct: 214 GIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFREL---VDEFSRM 268

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 42.0 bits (99), Expect = 9e-06
 Identities = 20/40 (50%), Positives = 22/40 (55%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          WY GKI R  AE  LL      G FL+R+S S   DY LS
Sbjct: 3  WYHGKISREVAEALLLREGGRDGLFLVRESTSAPGDYVLS 42

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198261 cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain found in Tec protein, Txk

 Score = 42.2 bits (99), Expect = 1e-05
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---------FCLKM 51
           WY   I R +AE+ LL  E+  GAF++RDS      Y++S + R+          + +K 
Sbjct: 8   WYHKNITRNQAER-LLRQESKEGAFIVRDS-RHLGSYTISVFTRARRSTEASIKHYQIKK 65

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
                 +  ++    +I  PEL++++  +A GL   LR P
Sbjct: 66  NDSGQWYVAERHLFQSI--PELIQYHQHNAAGLMSRLRYP 103

A member of the Tec protein tyrosine kinase Txk is expressed in thymus, spleen, lymph node, T lymphocytes, NK cells, mast cell lines, and myeloid cell line. Txk plays a role in TCR signal transduction, T cell development, and selection which is analogous to the function of Itk. Txk has been shown to interact with IFN-gamma. Unlike most of the Tec family members Txk lacks a PH domain. Instead Txk has a unique region containing a palmitoylated cysteine string which has a similar membrane tethering function as the PH domain. Txk also has a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP and crucial to the function of the PH domain. It is not present in Txk which is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 18/48 (37%), Positives = 28/48 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G+   E+   +E G R+P PP C   +Y +M++CW+ D   RP F+ L
Sbjct: 214 GIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 261

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 137 MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           +P P  CP  LY +ML CW ++  +RP+F+ +   L
Sbjct: 259 LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATL 294

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+ GKI R EA   +L+     G+FL+R+S++   DYSLS
Sbjct: 2  WFHGKISREEAYN-MLVKVGGPGSFLVRESDNTPGDYSLS 40

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 124 NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L   L +  
Sbjct: 288 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           +N+EV+  +  G+R+  P      +Y++M  CW + P  RP+F  L  +L
Sbjct: 206 SNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           GM+N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 224 GMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 268

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P  RPTF+ L   L+   T+
Sbjct: 242 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|198272 cd10409, SH2_Nck2, Src homology 2 (SH2) domain found in Nck

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 22/89 (24%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGA---FLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL 57
          WY+G + R +AE  L    N+ G    FLIRDSES  +D+S+S        LK       
Sbjct: 3  WYYGNVTRHQAECAL----NERGVEGDFLIRDSESSPSDFSVS--------LKAVGKNKH 50

Query: 58 FETQKA------GRTTIH-YPELVEHYSK 79
          F+ Q        G+   +   ELVEHY K
Sbjct: 51 FKVQLVDNVYCIGQRRFNSMDELVEHYKK 79

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198254 cd10391, SH2_SHE, Src homology 2 domain found in SH2 domain-containing adapter protein E (SHE)

 Score = 40.3 bits (94), Expect = 4e-05
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKM---TTGRSL 57
          WY G I R EAE +L        ++L+R+SES  + YS++  K S  C+ +    T  + 
Sbjct: 3  WYHGSISRAEAESRL--QPCKEASYLVRNSESGNSKYSIA-LKTSQGCVHIIVAQTKDNK 59

Query: 58 FETQKAGRTTIHYPELVEHYS 78
          +   +        PE+V +YS
Sbjct: 60 YTLNQTSAVFDSIPEVVHYYS 80

SHE is expressed in heart, lung, brain, and skeletal muscle. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 140 PPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
            P CP  ++ +M+ CW +D   RPTF  + 
Sbjct: 261 TPLCPSPVFKLMMRCWSRDIKDRPTFNKIH 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|198203 cd10340, SH2_N-SH2_SHP_like, N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC-LKMTTGRSLFE 59
          W+   I  IEAE  LL      G+FL R S+S   D++LS  +      +K+      ++
Sbjct: 2  WFHPVISGIEAEN-LLKTRGVDGSFLARPSKSNPGDFTLSVRRGDEVTHIKIQNTGDYYD 60

Query: 60 TQKAGRTTIHYPELVEHYS------KDADGLCVNLRKP 91
              G       ELV++Y       ++ +G  + L+ P
Sbjct: 61 LY-GGEKFATLSELVQYYMEQHGQLREKNGDVIELKYP 97

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [IVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 109 GVVVSAVDFGSGGM-----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP 163
           GV++  V F  G M     +N EV+  +  G+R+  P      +Y++M  CW + P  RP
Sbjct: 188 GVLMWEV-FTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRP 246

Query: 164 TFETL 168
           TF  L
Sbjct: 247 TFAEL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 1  WYFGKIK--RIEAEKKLL-LPENDHGAFLIRDSESRKNDYSLS 40
          W+ GK+   R EAEK LL   E   G FL+R+SE+   DY+LS
Sbjct: 6  WFHGKLGDGRDEAEKLLLEYCEGGDGTFLVRESETFVGDYTLS 48

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 140 PPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           PP CP  LY++ML+CW +D  +RP+F  + 
Sbjct: 270 PPPCPQGLYELMLQCWSRDCRERPSFSDIH 299

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 245 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.8 bits (98), Expect = 8e-05
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
             N+E + +V  G R+  P     ++Y IM  CW +   +RPTF+ L
Sbjct: 205 FNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQL 251

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|198221 cd10358, SH2_PTK6_Brk, Src homology 2 domain found in protein-tyrosine kinase-6 (PTK6) which is also known as breast tumor kinase (Brk)

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 21/40 (52%), Positives = 24/40 (60%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FG I R EA ++L    N  GAFLIR SE    DY LS
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLS 43

Human protein-tyrosine kinase-6 (PTK6, also known as breast tumor kinase (Brk)) is a member of the non-receptor protein-tyrosine kinase family and is expressed in two-thirds of all breast tumors. PTK6 (9). PTK6 contains a SH3 domain, a SH2 domain, and catalytic domains. For the case of the non-receptor protein-tyrosine kinases, the SH2 domain is typically involved in negative regulation of kinase activity by binding to a phosphorylated tyrosine residue near to the C terminus. The C-terminal sequence of PTK6 (PTSpYENPT where pY is phosphotyrosine) is thought to be a self-ligand for the SH2 domain. The structure of the SH2 domain resembles other SH2 domains except for a centrally located four-stranded antiparallel beta-sheet (strands betaA, betaB, betaC, and betaD). There are also differences in the loop length which might be responsible for PTK6 ligand specificity. There are two possible means of regulation of PTK6: autoinhibitory with the phosphorylation of Tyr playing a role in its negative regulation and autophosphorylation at this site, though it has been shown that PTK6 might phosphorylate signal transduction-associated proteins Sam68 and signal transducing adaptor family member 2 (STAP/BKS) in vivo. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 100

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 19/48 (39%), Positives = 27/48 (56%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GM   EV   +E G R+  P  C   +Y +M++CW+ D   RPTF+ L
Sbjct: 214 GMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|198197 cd09944, SH2_Grb7_family, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 5/100 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-----EYKRSSFCLKMTTGR 55
           W+ G I R EA + +       G FL+R+S+S    + LS     + K          G+
Sbjct: 7   WFHGGISRDEAARLIRQQGLVDGVFLVRESQSNPGAFVLSLKHGQKIKHYQIIPIEDEGQ 66

Query: 56  SLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
             F             +LVE Y  +A  L   L+  C +V
Sbjct: 67  WYFTLDDGVTKFYDLLQLVEFYQLNAGSLPTRLKHYCTRV 106

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. There are 3 members of the Grb7 family of proteins: Grb7, Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR). Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 28/52 (53%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           ++N E +  +  G  +  P  CPP +Y IM  CW ++P +R   + +  +L+
Sbjct: 228 LSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS----------EYKRSSFCLK 50
          W  G + R EA + L    +  G+FL+R S  R   Y L+          E +       
Sbjct: 2  WLHGALDRNEAVEILKQKADADGSFLVRYSRRRPGGYVLTLVYENHVYHFEIQNRDDKWF 61

Query: 51 MTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL 84
                 FE+            L+EHY++ ADGL
Sbjct: 62 YIDDGPYFES---------LEHLIEHYTQFADGL 86

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           ++N EV+  +  G  +  P  CP  +YDIML CW ++P +R   + + 
Sbjct: 229 LSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIY 276

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|198206 cd10343, SH2_SHIP, Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSE-YKRSSFCLK-MTTGRSLF 58
           WY G I R +AE+ LL      G+FL+RDSES    Y+L   Y+      + +       
Sbjct: 5   WYHGNITRSKAEE-LLSKAGKDGSFLVRDSESVSGAYALCVLYQNCVHTYRILPNAEDKL 63

Query: 59  ETQKAGRTTIHY----PELVEHYSKDADGLCVNLRKP 91
             Q +    + +    PEL+E Y K+  GL  +L  P
Sbjct: 64  SVQASEGVPVRFFTTLPELIEFYQKENMGLVTHLLYP 100

The SH2-containing inositol-5'-phosphatase, SHIP (also called SHIP1/SHIP1a), is a hematopoietic-restricted phosphatidylinositide phosphatase that translocates to the plasma membrane after extracellular stimulation and hydrolyzes the phosphatidylinositol-3-kinase (PI3K)-generated second messenger PI-3,4,5-P3 (PIP3) to PI-3,4-P2. As a result, SHIP dampens down PIP3 mediated signaling and represses the proliferation, differentiation, survival, activation, and migration of hematopoietic cells. PIP3 recruits lipid-binding pleckstrin homology(PH) domain-containing proteins to the inner wall of the plasma membrane and activates them. PH domain-containing downstream effectors include the survival/proliferation enhancing serine/threonine kinase, Akt (protein kinase B), the tyrosine kinase, Btk, the regulator of protein translation, S6K, and the Rac and cdc42 guanine nucleotide exchange factor, Vav. SHIP is believed to act as a tumor suppressor during leukemogenesis and lymphomagenesis, and may play a role in activating the immune system to combat cancer. SHIP contains an N-terminal SH2 domain, a centrally located phosphatase domain that specifically hydrolyzes the 5'-phosphate from PIP3, PI-4,5-P2 and inositol-1,3,4,5- tetrakisphosphate (IP4), a C2 domain, that is an allosteric activating site when bound by SHIP's enzymatic product, PI-3,4-P2; 2 NPXY motifs that bind proteins with a phosphotyrosine binding (Shc, Dok 1, Dok 2) or an SH2 (p85a, SHIP2) domain; and a proline-rich domain consisting of four PxxP motifs that bind a subset of SH3-containing proteins including Grb2, Src, Lyn, Hck, Abl, PLCg1, and PIAS1. The SH2 domain of SHIP binds to the tyrosine phosphorylated forms of Shc, SHP-2, Doks, Gabs, CD150, platelet-endothelial cell adhesion molecule, Cas, c-Cbl, immunoreceptor tyrosine-based inhibitory motifs (ITIMs), and immunoreceptor tyrosine-based activation motifs (ITAMs). The X-linked lymphoproliferative syndrome (XLP) gene encodes SAP (also called SH2D1A/DSHP) a protein that consists of a 5 residue N-terminus, a single SH2 domain, and a short 25 residue C-terminal tail. XLP is characterized by an extreme sensitivity to Epstein-Barr virus. Both T and natural killer (NK) cell dysfunctions have been seen in XLP patients. SAP binds the cytoplasmic tail of Signaling lymphocytic activation molecule (SLAM), 2B4, Ly-9, and CD84. SAP is believed to function as a signaling inhibitor, by blocking or regulating binding of other signaling proteins. SAP and the SAP-like protein EAT-2 recognize the sequence motif TIpYXX(V/I), which is found in the cytoplasmic domains of a restricted number of T, B, and NK cell surface receptors and are proposed to be natural inhibitors or regulators of the physiological role of a small family of receptors on the surface of these cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198250 cd10387, SH2_SOCS6, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 4/41 (9%)

Query: 1  WYFGKIKRIEAEKKLL-LPENDHGAFLIRDSESRKNDYSLS 40
          WY+G I R EAE KL  +P+   G+FL+RDS   +   SLS
Sbjct: 12 WYWGPITRWEAEGKLANVPD---GSFLVRDSSDDRYLLSLS 49

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 100

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          WY+G I R E  +K+    +  G FL+RD+ + K DY+L+
Sbjct: 9  WYWGDISREEVNEKMRDTPD--GTFLVRDASTMKGDYTLT 46

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|198251 cd10388, SH2_SOCS7, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 14/61 (22%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
          WY+G +   +AEK L    +  G+FL+RDS   +  +SLS            E  + +F 
Sbjct: 12 WYWGPMSWEDAEKVLSNKPD--GSFLVRDSSDDRYIFSLSFRSQGSVHHTRIEQYQGTFS 69

Query: 49 L 49
          L
Sbjct: 70 L 70

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198275 cd10412, SH2_SH2B3, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLS 40
          W+ G I R++A + + L   D HG FL+R SE+R+ +Y L+
Sbjct: 10 WFHGPISRVKAAQLVQLQGPDAHGVFLVRQSETRRGEYVLT 50

SH2B3 (Lnk), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B3 negatively regulates lymphopoiesis and early hematopoiesis. The lnk-deficiency results in enhanced production of B cells, and expansion as well as enhanced function of hematopoietic stem cells (HSCs), demonstrating negative regulatory functions of Sh2b3/Lnk in cytokine signaling. Sh2b3/Lnk also functions in responses controlled by cell adhesion and in crosstalk between integrin- and cytokine-mediated signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198259 cd10396, SH2_Tec_Itk, Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)

 Score = 37.8 bits (88), Expect = 5e-04
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 15/102 (14%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRS----SFCLK------ 50
           WY   I R +AEK LL  E   G F++RDS S+   Y++S Y ++    + C++      
Sbjct: 8   WYNKNINRSKAEK-LLRDEGKEGGFMVRDS-SQPGLYTVSLYTKAGGEGNPCIRHYHIKE 65

Query: 51  -MTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
              + +  +  +K    +I  PEL+E++  +A GL   LR P
Sbjct: 66  TNDSPKKYYLAEKHVFNSI--PELIEYHKHNAAGLVTRLRYP 105

A member of the Tec protein tyrosine kinase Itk is expressed thymus, spleen, lymph node, T lymphocytes, NK and mast cells. It plays a role in T-cell proliferation and differentiation, analogous to Tec family kinases Txk. Itk has been shown to interact with Fyn, Wiskott-Aldrich syndrome protein, KHDRBS1, PLCG1, Lymphocyte cytosolic protein 2, Linker of activated T cells, Karyopherin alpha 2, Grb2, and Peptidylprolyl isomerase A. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198178 cd09923, SH2_SOCS_family, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 24/91 (26%)

Query: 1  WYFGKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLS------------EYKRSSF 47
          WY+G I R EAE+ L        G FL+RDS   +  +S+S            EY    F
Sbjct: 2  WYWGGITRYEAEELL---AGKPEGTFLVRDSSDSRYLFSVSFRTYGRTLHARIEYSNGRF 58

Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHYS 78
                  S   +  +        EL+EHY 
Sbjct: 59 --------SFDSSDPSVPRFPCVVELIEHYV 81

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198200 cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in the Breast Cancer Anti-estrogen Resistance protein 3

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          WY G+I R  AE   L+     G FL+RDS S   DY L+
Sbjct: 8  WYHGRIPRQVAES--LVQRE--GDFLVRDSLSSPGDYVLT 43

BCAR3 is part of a growing family of guanine nucleotide exchange factors is responsible for activation of Ras-family GTPases, including Sos1 and 2, GRF1 and 2, CalDAG-GEF/GRP1-4, C3G, cAMP-GEF/Epac 1 and 2, PDZ-GEFs, MR-GEF, RalGDS family members, RalGPS, RasGEF, Smg GDS, and phospholipase C(epsilon). 12102558 21262352 BCAR3 binds to the carboxy-terminus of BCAR1/p130Cas, a focal adhesion adapter protein. Over expression of BCAR1 (p130Cas) and BCAR3 induces estrogen independent growth in normally estrogen-dependent cell lines. They have been linked to resistance to anti-estrogens in breast cancer, Rac activation, and cell motility, though the BCAR3/p130Cas complex is not required for this activity in BCAR3. Many BCAR3-mediated signaling events in epithelial and mesenchymal cells are independent of p130Cas association. Structurally these proteins contain a single SH2 domain upstream of their RasGEF domain, which is responsible for the ability of BCAR3 to enhance p130Cas over-expression-induced migration. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 136

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           ++N EV+  +  G  +  P  CP  +YD+ML CW ++P  R   + +   L++ 
Sbjct: 226 LSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|198252 cd10389, SH2_SHB, Src homology 2 domain found in SH2 domain-containing adapter protein B (SHB)

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC-LKMTTGRSLFE 59
          WY G I R +AE  L L +    ++L+R+S++ K+DYSLS      F  +K+   +  + 
Sbjct: 3  WYHGAISRGDAENLLRLCK--ECSYLVRNSQTSKHDYSLSLKSNQGFMHMKLAKTKEKYV 60

Query: 60 TQKAGRTTIHYPELVEHYS 78
            +        PE++ +Y+
Sbjct: 61 LGQNSPPFDSVPEVIHYYT 79

SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 124 NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           N +  + ++ GYRM  P      +Y+IM +CW +    RP F  L   + D  T
Sbjct: 348 NEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLLT 401

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|198209 cd10346, SH2_SH2B_family, Src homology 2 (SH2) domain found in SH2B adapter protein family

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLS 40
          W+ G + R +A + +L    D HG FL+R SE+R+ ++ L+
Sbjct: 10 WFHGTLSRSDAAQLVLHSGADGHGVFLVRQSETRRGEFVLT 50

The SH2B adapter protein family has 3 members: SH2B1 (SH2-B, PSM), SH2B2 (APS), and SH2B3 (Lnk). SH2B family members contain a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. SH2B3 negatively regulates lymphopoiesis and early hematopoiesis. The lnk-deficiency results in enhanced production of B cells, and expansion as well as enhanced function of hematopoietic stem cells (HSCs), demonstrating negative regulatory functions of Sh2b3/Lnk in cytokine signaling. Sh2b3/Lnk also functions in responses controlled by cell adhesion and in crosstalk between integrin- and cytokine-mediated signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 2  YFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          Y G I R EAE+  LL     G++LIR+S      Y+LS
Sbjct: 9  YHGLISREEAEQ--LLSGASDGSYLIRESSRDDGYYTLS 45

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 1  WYFGKIKRIEAEKKL-LLPENDHGAFLIRDSESRKNDYSLS 40
          W+   + R +AE+ L  +P +  GAFL+R SE+  N +++S
Sbjct: 6  WFHANLTREQAEEMLMRVPRD--GAFLVRPSETDPNSFAIS 44

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198253 cd10390, SH2_SHD, Src homology 2 domain found in SH2 domain-containing adapter proteins D (SHD)

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+ G + R +AE  L L +   G++L+R SE+R  D SLS      F L +   R+    
Sbjct: 3  WFHGPLSRADAENLLSLCK--EGSYLVRLSETRPQDCSLSLRSSQGF-LHLKFARTRENQ 59

Query: 61 QKAGRTTIHY---PELVEHYS 78
             G+ +  +   PELV HYS
Sbjct: 60 VVLGQHSGPFPSVPELVLHYS 80

The expression of SHD is restricted to the brain. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198273 cd10410, SH2_SH2B1, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 1  WYFGKIKRIEAEKKLLLP-ENDHGAFLIRDSESRKNDYSLS 40
          W+ G + R++A + +L      HG FL+R SE+R+ +Y L+
Sbjct: 10 WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGEYVLT 50

SH2B1 (SH2-B, PSM), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|199830 cd10349, SH2_SH2D2A_SH2D7, Src homology 2 domain found in the SH2 domain containing protein 2A and 7 (SH2D2A and SH2D7)

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCL-----KMTTGR 55
          W+ G I R EAE+  LL     G +L+R SE     + LS Y+  + C      ++  GR
Sbjct: 2  WFHGFITRREAER--LLEPKPQGCYLVRFSE-SAVTFVLS-YRSRTCCRHFLLAQLRDGR 57

Query: 56 SLFETQKAGRTTIHYPELVEHY 77
           +   + +    +   +L+ HY
Sbjct: 58 HVVLGEDSAHARLQ--DLLLHY 77

SH2D2A and SH7 both contain a single SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
KOG4278|consensus	1157		100.0
KOG0197|consensus	468		100.0
KOG1026|consensus	774		99.97
KOG1095|consensus	1025		99.95
KOG0196|consensus	996		99.95
KOG0194|consensus	474		99.94
KOG4257|consensus	974		99.94
KOG0192|consensus	362		99.93
KOG0200|consensus	609		99.92
KOG4721|consensus	904		99.9
KOG0199|consensus	1039		99.88
KOG1025|consensus	1177		99.87
KOG0193|consensus	678		99.86
KOG1094|consensus	807		99.84
KOG1024|consensus	563		99.84
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.79
PHA02988	283	hypothetical protein; Provisional	99.78
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.77
KOG0581|consensus	364		99.73
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.72
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.7
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.7
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.7
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.69
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.68
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.68
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.68
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.68
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.68
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.67
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.67
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.67
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.67
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.66
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.66
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.66
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.66
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.65
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.65
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.65
KOG0578|consensus	550		99.65
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.65
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.64
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.64
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.64
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.64
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.64
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.64
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.64
KOG0661|consensus	538		99.64
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.63
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.63
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.63
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.63
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.62
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.62
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.62
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.62
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.62
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.62
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.62
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.62
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.62
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.62
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.62
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.62
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.62
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.62
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.62
KOG0575|consensus	592		99.62
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.61
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.61
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.61
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.6
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.6
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.6
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.6
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.59
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.59
KOG0588|consensus	786		99.59
KOG0198|consensus	313		99.59
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.59
KOG1187|consensus	361		99.58
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.58
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.58
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.58
PTZ00267	478	NIMA-related protein kinase; Provisional	99.58
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.58
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.58
KOG4279|consensus	1226		99.57
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.57
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.57
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.57
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.57
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.57
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.56
KOG0591|consensus	375		99.56
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.56
KOG0584|consensus	632		99.55
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.55
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.55
KOG0195|consensus	448		99.55
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.55
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.54
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.54
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.54
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.54
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.54
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.53
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.53
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.53
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.52
KOG0582|consensus	516		99.52
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.52
KOG0579|consensus	1187		99.52
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.52
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.52
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.51
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.51
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.51
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.51
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.51
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.51
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.5
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.5
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.5
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.5
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.49
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.49
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.49
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.49
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.48
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.48
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.48
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.48
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.48
KOG0589|consensus	426		99.47
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.47
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.47
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.47
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.46
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.46
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.46
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.45
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.45
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.45
PTZ00283	496	serine/threonine protein kinase; Provisional	99.44
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.44
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.44
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.44
KOG0593|consensus	396		99.43
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.43
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.43
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.43
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.43
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.43
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.42
KOG0615|consensus	475		99.42
KOG0580|consensus	281		99.42
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.41
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.41
KOG0583|consensus	370		99.41
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.41
KOG0577|consensus	948		99.41
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.41
KOG0201|consensus	467		99.4
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.4
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.4
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.4
KOG0033|consensus	355		99.4
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.4
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.39
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.39
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.39
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.39
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.39
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.39
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.38
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.38
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.38
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.38
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.38
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.38
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.38
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.37
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.37
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.37
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.37
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.37
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.37
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.37
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.37
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.36
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.36
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.35
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.35
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.35
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.35
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.35
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.35
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.34
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.34
KOG2052|consensus	513		99.34
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.34
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.34
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.34
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.34
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.34
KOG0595|consensus	429		99.33
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.33
KOG4645|consensus	1509		99.33
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.33
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.32
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.32
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.32
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.32
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.32
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.32
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.31
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.31
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.31
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.3
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.3
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.3
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.3
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.29
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.29
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.29
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.29
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.29
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.29
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.28
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.28
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.27
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.27
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.27
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.27
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.27
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.26
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.26
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.26
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.26
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.25
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.25
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.25
PHA03209	357	serine/threonine kinase US3; Provisional	99.25
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.24
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.24
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.24
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.24
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.24
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.24
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.23
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.23
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.23
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.23
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.22
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.21
KOG0790|consensus	600		99.21
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.21
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.21
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.21
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.21
KOG2345|consensus	302		99.21
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.2
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.2
PTZ00036	440	glycogen synthase kinase; Provisional	99.2
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.2
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.2
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.2
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.19
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.19
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.19
PHA03207	392	serine/threonine kinase US3; Provisional	99.19
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.19
PHA03211	461	serine/threonine kinase US3; Provisional	99.19
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.19
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.18
KOG0592|consensus	604		99.18
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.18
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.18
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.17
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.17
PHA02882	294	putative serine/threonine kinase; Provisional	99.16
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.16
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.16
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.16
PHA03212	391	serine/threonine kinase US3; Provisional	99.16
KOG1989|consensus	738		99.16
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.16
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.15
KOG4717|consensus	864		99.15
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.15
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.15
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.15
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.14
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.14
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.13
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.13
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.13
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.12
KOG4226|consensus	379		99.12
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.12
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.11
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.11
KOG4637|consensus	464		99.11
KOG0659|consensus	318		99.11
PLN00181	793	protein SPA1-RELATED; Provisional	99.11
KOG0576|consensus	829		99.11
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.11
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.11
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.1
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.1
KOG0599|consensus	411		99.1
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.1
KOG4792|consensus	293		99.1
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.09
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.09
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.09
KOG0598|consensus	357		99.09
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.09
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.09
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.08
KOG0585|consensus	576		99.07
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.07
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.07
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.06
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.06
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.06
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.05
KOG0603|consensus	612		99.05
KOG0574|consensus	502		99.05
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.05
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.04
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.04
KOG4637|consensus	464		99.04
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.04
KOG1264|consensus	1267		99.02
KOG1023|consensus	484		99.02
PHA03210	501	serine/threonine kinase US3; Provisional	99.02
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.01
PLN00009	294	cyclin-dependent kinase A; Provisional	99.01
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.99
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.99
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.99
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.99
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.99
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.98
KOG0600|consensus	560		98.97
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.95
KOG0694|consensus	694		98.95
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.93
KOG3653|consensus	534		98.92
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.91
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.91
KOG0586|consensus	596		98.91
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.89
KOG0611|consensus	668		98.89
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.88
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.87
KOG0587|consensus	953		98.87
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.86
KOG0032|consensus	382		98.85
KOG0596|consensus	677		98.83
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.81
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.79
KOG0658|consensus	364		98.78
KOG0197|consensus	468		98.78
KOG2996|consensus	865		98.78
KOG0607|consensus	463		98.76
KOG0597|consensus	808		98.75
PTZ00284	467	protein kinase; Provisional	98.74
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.71
KOG0983|consensus	391		98.69
KOG0616|consensus	355		98.69
KOG1264|consensus	1267		98.68
KOG0594|consensus	323		98.65
KOG1006|consensus	361		98.62
KOG1035|consensus	1351		98.59
KOG0663|consensus	419		98.59
KOG1930|consensus	483		98.57
KOG0660|consensus	359		98.57
KOG4250|consensus	732		98.54
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.51
KOG0194|consensus	474		98.47
KOG0604|consensus	400		98.44
KOG0605|consensus	550		98.42
KOG0790|consensus	600		98.31
KOG1027|consensus	903		98.3
KOG3601|consensus	222		98.28
KOG4278|consensus	1157		98.26
KOG0610|consensus	459		98.18
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.11
KOG0667|consensus	586		98.1
KOG0671|consensus	415		98.07
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.07
KOG1151|consensus	775		98.01
KOG0669|consensus	376		98.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.98
KOG0696|consensus	683		97.97
KOG0614|consensus	732		97.85
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.77
KOG0666|consensus	438		97.58
KOG0986|consensus	591		97.55
KOG1167|consensus	418		97.45
KOG0690|consensus	516		97.28
KOG0662|consensus	292		97.16
KOG0590|consensus	601		97.09
KOG3751|consensus	622		97.03
KOG0668|consensus	338		96.94
KOG0612|consensus	1317		96.92
KOG0665|consensus	369		96.9
KOG0664|consensus	449		96.9
KOG1152|consensus	772		96.84
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	96.73
KOG0695|consensus	593		96.62
KOG4236|consensus	888		96.44
KOG4158|consensus	598		96.12
KOG0670|consensus	752		95.94
KOG0984|consensus	282		95.63
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	95.45
KOG3697|consensus	345		94.61
KOG1345|consensus	378		94.54
KOG1266|consensus	458		94.27
KOG1240|consensus	1431		93.88
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	93.7
KOG1290|consensus	590		93.05
KOG0606|consensus	1205		90.2
KOG1033|consensus	516		89.87
KOG1164|consensus	322		88.56
KOG0608|consensus	1034		87.48
KOG4566|consensus	258		82.84
KOG1163|consensus	341		82.56

>KOG4278|consensus

Probab=100.00  E-value=1.3e-36  Score=237.93  Aligned_cols=175  Identities=30%  Similarity=0.502  Sum_probs=161.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||+++|..++.+|+.-.  .|.|||||+.+.+|.|++|+++  .+.|.||+|.....|  |+.....|. +.+|+.|+
T Consensus       154 WYHGpvSRsaaEy~LsSgI--nGSFLVRESEsSpgQ~sISlRy--eGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHH  229 (1157)
T KOG4278|consen  154 WYHGPVSRSAAEYILSSGI--NGSFLVRESESSPGQYSISLRY--EGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHH  229 (1157)
T ss_pred             cccCccccchhhhhhhcCc--ccceEEeeccCCCcceeEEEEe--cceEEEEEeeccCCccEEEeehhhhhHHHHHHhhc
Confidence            9999999999999997654  4999999999999999999999  999999999999888  999999999 99999999


Q ss_pred             hhccCCceeeccCCcccccccc--cccccC--------------------------------------------------
Q psy1684          78 SKDADGLCVNLRKPCVQVSCRI--YLVHGT--------------------------------------------------  105 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~p~--~l~~~~--------------------------------------------------  105 (189)
                      ..+|+||.+.+..|..+++.|.  ++++..                                                  
T Consensus       230 StvADGLittLhYPApK~nKptvygvSPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveE  309 (1157)
T KOG4278|consen  230 STVADGLITTLHYPAPKKNKPTVYGVSPNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE  309 (1157)
T ss_pred             cccccceeEeeeccCccCCCCceeeecCCcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHH
Confidence            9999999999999988888776  343322                                                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       310 FLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHR  389 (1157)
T KOG4278|consen  310 FLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHR  389 (1157)
T ss_pred             HHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhh
Confidence                                                                                            


Q ss_pred             -------------------------------------------------CCCCccc-e-EEEec-------------CCC
Q psy1684         106 -------------------------------------------------NLSGVVV-S-AVDFG-------------SGG  121 (189)
Q Consensus       106 -------------------------------------------------~~~~~~~-s-VwsfG-------------~~~  121 (189)
                                                                       ..+.|+. | ||+||             |+|
T Consensus       390 DLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG  469 (1157)
T KOG4278|consen  390 DLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG  469 (1157)
T ss_pred             hhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence                                                             5678899 9 99999             999


Q ss_pred             CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       122 ~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      ++..+|+..+.+|+||..|..||+.+|+||..||+++|++||+|+||...|+.|+++.
T Consensus       470 idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s  527 (1157)
T KOG4278|consen  470 IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS  527 (1157)
T ss_pred             ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999999999999999854

>KOG0197|consensus

Probab=100.00  E-value=8.5e-36  Score=229.09  Aligned_cols=181  Identities=47%  Similarity=0.771  Sum_probs=157.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec----CCCeeeEEEEEeccCC--c--cCCCCCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR----SSFCLKMTTGRSLFET--Q--KAGRTTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~----~~~~v~h~~i~~~~~g--y--l~~~~~~~-l~   71 (189)
                      ||+|+|+|.++++.|.......|+||||++.+..|+|+++++..    ....++|++|...++|  +  +.....|. +.
T Consensus        83 Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~  162 (468)
T KOG0197|consen   83 WFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQ  162 (468)
T ss_pred             chhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHH
Confidence            99999999999988877777889999999998899999999984    1239999999998888  4  77778888 99


Q ss_pred             HHHHHhhhccCCceeeccCCcccc--cccc--cccccC------------------------------------------
Q psy1684          72 ELVEHYSKDADGLCVNLRKPCVQV--SCRI--YLVHGT------------------------------------------  105 (189)
Q Consensus        72 ~li~~~~~~a~gl~~~~~~~~~~~--~~p~--~l~~~~------------------------------------------  105 (189)
                      ++++|+...+.|++..+..|+...  .+|.  +++++.                                          
T Consensus       163 ~lv~~~~~~~~gl~~~l~~p~~~~~~~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~  242 (468)
T KOG0197|consen  163 QLVNYYSKNADGLCTRLRDPCSKQGHTKPQTPDLARDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS  242 (468)
T ss_pred             HHHhhhhccCcchhhcccCchhccCCCCCCCCccccCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc
Confidence            999999999999999998887642  1232  222222                                          


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       243 m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  243 MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence                                                                                            


Q ss_pred             ------------------------------------------------------CCCCccc-e-EEEec-----------
Q psy1684         106 ------------------------------------------------------NLSGVVV-S-AVDFG-----------  118 (189)
Q Consensus       106 ------------------------------------------------------~~~~~~~-s-VwsfG-----------  118 (189)
                                                                            ..++||. | |||||           
T Consensus       323 ~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~  402 (468)
T KOG0197|consen  323 NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR  402 (468)
T ss_pred             CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC
Confidence                                                                  7888999 9 99999           


Q ss_pred             --CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q psy1684         119 --SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS  181 (189)
Q Consensus       119 --~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~  181 (189)
                        |+++++.+++..|.+|+|+|.|+.||+++|+||..||+.+|++||||+.+...|+.+.....+
T Consensus       403 ~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~~  467 (468)
T KOG0197|consen  403 VPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTSTEG  467 (468)
T ss_pred             CCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcccC
Confidence              899999999999999999999999999999999999999999999999999999999886554

>KOG1026|consensus

Probab=99.97  E-value=8.5e-32  Score=216.60  Aligned_cols=168  Identities=19%  Similarity=0.325  Sum_probs=137.7

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~l~~li~~~~~~a   81 (189)
                      .+.++|+|||++||+|...++.++|.|||.. ||+.-.++.. .....+     ..+| -  ........+++..+.|+|
T Consensus       543 la~l~H~nIVrLlGVC~~~~P~~MvFEYm~~-GDL~eFLra~-sP~a~~-----~~~g~~--~~~~L~~~q~L~iA~QIA  613 (774)
T KOG1026|consen  543 LAELQHPNIVRLLGVCREGDPLCMVFEYMDH-GDLHEFLRAR-SPKADK-----LASGQD--TPPPLSTSQFLHIATQIA  613 (774)
T ss_pred             HHhccCCCeEEEEEEEccCCeeEEEEEeccc-ccHHHHHHhh-CCcccc-----ccCCCC--CCCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999998 6553333331 111100     1111 1  022244788999999999


Q ss_pred             CCceeeccCCcccccccc----------------cccccC------------------------CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKPCVQVSCRI----------------YLVHGT------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~----------------~l~~~~------------------------~~~~~~~-s-VwsfG-  118 (189)
                      .||.|+.+...+|||+..                ||+++.                        ..++||+ | ||||| 
T Consensus       614 aGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GV  693 (774)
T KOG1026|consen  614 AGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGV  693 (774)
T ss_pred             HHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhh
Confidence            999999999999999766                555555                        7899999 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                  |.+++++||++.|+.|.-++.|.+||.++|+||..||+.+|++||+|+||...|+.+.+.+
T Consensus       694 vLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  694 VLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             hhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence                        8899999999999999999999999999999999999999999999999999999887643

>KOG1095|consensus

Probab=99.95  E-value=3.6e-29  Score=207.66  Aligned_cols=162  Identities=20%  Similarity=0.241  Sum_probs=134.2

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +++..|+|+++++|.|-.....+||.|+|.+ |++.-.++..   +.         .  -.....+.+.+|+.+..++|.
T Consensus       749 m~~f~HpNiv~liGv~l~~~~~~i~leyM~g-GDL~sflr~~---r~---------~--~~~~~~L~~~dLl~~a~dvA~  813 (1025)
T KOG1095|consen  749 MSKFDHPNIVSLIGVCLDSGPPLILLEYMEG-GDLLSFLRES---RP---------A--PFQPSNLSMRDLLAFALDVAK  813 (1025)
T ss_pred             HhcCCCcceeeEEEeecCCCCcEEEehhccc-CcHHHHHHhc---cc---------c--cCCCCCCCHHHHHHHHHHHhh
Confidence            4678999999999999988889999999998 4332222220   00         0  000223348999999999999


Q ss_pred             CceeeccCCcccccccc----------------cccccC------------------------CCCCccc-e-EEEec--
Q psy1684          83 GLCVNLRKPCVQVSCRI----------------YLVHGT------------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~----------------~l~~~~------------------------~~~~~~~-s-VwsfG--  118 (189)
                      |+.|+.+++.||||+..                |||++.                        ..+.||. | |||||  
T Consensus       814 G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVl  893 (1025)
T KOG1095|consen  814 GMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVL  893 (1025)
T ss_pred             hhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHH
Confidence            99999999999999766                666644                        5688999 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                 |++.++.+|+..+.+|-|++.|..||..+|+||.+||+.+|++||+|..|++.+..+.+..
T Consensus       894 lWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  894 LWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             HHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence                       9999999999988777799999999999999999999999999999999999999888754

>KOG0196|consensus

Probab=99.95  E-value=1.5e-29  Score=202.15  Aligned_cols=171  Identities=20%  Similarity=0.347  Sum_probs=121.5

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEe----ccCC--ccCCCCCcC--HhH--
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRS----LFET--QKAGRTTIH--YPE--   72 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~----~~~g--yl~~~~~~~--l~~--   72 (189)
                      +|..+|||+++|-|+..+..+.+||.|+|.+ |.+--.++. +++++.-.++..    ++.|  ||.+-..+|  |++  
T Consensus       684 MGQFdHPNIIrLEGVVTks~PvMIiTEyMEN-GsLDsFLR~-~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARN  761 (996)
T KOG0196|consen  684 MGQFDHPNIIRLEGVVTKSKPVMIITEYMEN-GSLDSFLRQ-NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARN  761 (996)
T ss_pred             cccCCCCcEEEEEEEEecCceeEEEhhhhhC-CcHHHHHhh-cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhh
Confidence            6889999999999999999999999999999 533333333 133333222221    2222  554433333  211  


Q ss_pred             -HHH--HhhhccC-CceeeccC------------CcccccccccccccCCCCCccc-e-EEEec-------------CCC
Q psy1684          73 -LVE--HYSKDAD-GLCVNLRK------------PCVQVSCRIYLVHGTNLSGVVV-S-AVDFG-------------SGG  121 (189)
Q Consensus        73 -li~--~~~~~a~-gl~~~~~~------------~~~~~~~p~~l~~~~~~~~~~~-s-VwsfG-------------~~~  121 (189)
                       |++  ...++++ |++..+..            -.|+|.+||-+    ...+||. | |||||             |-+
T Consensus       762 ILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAI----a~RKFTsASDVWSyGIVmWEVmSyGERPYWd  837 (996)
T KOG0196|consen  762 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMSYGERPYWD  837 (996)
T ss_pred             eeeccceEEEeccccceeecccCCCccccccCCccceeecChhHh----hhcccCchhhccccceEEEEecccCCCcccc
Confidence             111  1123333 44433311            12344444444    7889999 9 99999             888


Q ss_pred             CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       122 ~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      |++.+|+..|..|+|+|.|.+||..+++||..||++|-..||.|.+|+..|+.+++.+
T Consensus       838 mSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP  895 (996)
T KOG0196|consen  838 MSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP  895 (996)
T ss_pred             cchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence            9999999999999999999999999999999999999999999999999999988753

>KOG0194|consensus

Probab=99.94  E-value=3.2e-28  Score=189.55  Aligned_cols=156  Identities=25%  Similarity=0.361  Sum_probs=137.6

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a   81 (189)
                      +..++|+|+++++|++..+++.+||+|.+++ |    ++..                 ||.+.. .+++.+.+.+..+.|
T Consensus       215 Mr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~g-G----sL~~-----------------~L~k~~~~v~~~ek~~~~~~AA  272 (474)
T KOG0194|consen  215 MRQLNHPNVVRFYGVAVLEEPLMLVMELCNG-G----SLDD-----------------YLKKNKKSLPTLEKLRFCYDAA  272 (474)
T ss_pred             HHhCCCCCEEEEEEEEcCCCccEEEEEecCC-C----cHHH-----------------HHHhCCCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999998 4    3444                 666555 366899999999999


Q ss_pred             CCceeeccCCcccccccc-------------------------------------cccccC-CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSCRI-------------------------------------YLVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~-------------------------------------~l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      .|+.|+|.+.|+|||+.+                                     |||||. ..+.||. + |||||   
T Consensus       273 ~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~  352 (474)
T KOG0194|consen  273 RGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL  352 (474)
T ss_pred             hHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeE
Confidence            999999999999999766                                     666665 4567999 9 99999   


Q ss_pred             ----------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 ----------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                                |+++++.++...| .+|+|++.|..+|.++..++.+||..||++||||.++.+.|+.+.....
T Consensus       353 ~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  353 WEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             EeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence                      8999999999999 7899999999999999999999999999999999999999998887544

>KOG4257|consensus

Probab=99.94  E-value=1e-28  Score=193.71  Aligned_cols=153  Identities=22%  Similarity=0.417  Sum_probs=132.3

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a   81 (189)
                      +.+..|+++++|+|.|. +.+.+||+|..+.|.     ++.                 ||..++ .+.+..|+-|+.+.+
T Consensus       445 MrnfdHphIikLIGv~~-e~P~WivmEL~~~GE-----Lr~-----------------yLq~nk~sL~l~tL~ly~~Qi~  501 (974)
T KOG4257|consen  445 MRNFDHPHIIKLIGVCV-EQPMWIVMELAPLGE-----LRE-----------------YLQQNKDSLPLRTLTLYCYQIC  501 (974)
T ss_pred             HHhCCCcchhheeeeee-ccceeEEEecccchh-----HHH-----------------HHHhccccchHHHHHHHHHHHH
Confidence            46789999999999996 568999999988732     222                 555433 344888999999999


Q ss_pred             CCceeeccCCcccccccc--------------------------------------cccccC-CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSCRI--------------------------------------YLVHGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~--------------------------------------~l~~~~-~~~~~~~-s-VwsfG--  118 (189)
                      ++++|++++.++|||+..                                      |||+|. ....||. | ||-||  
T Consensus       502 talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVC  581 (974)
T KOG4257|consen  502 TALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVC  581 (974)
T ss_pred             HHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHH
Confidence            999999999999999765                                      666655 5677999 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                 |.|+.+.+|+-.+++|.|+|.|+.||+.+|.||.+||+.+|.+||+|++|...|+.+++.
T Consensus       582 mWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe  652 (974)
T KOG4257|consen  582 MWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE  652 (974)
T ss_pred             HHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence                       999999999999999999999999999999999999999999999999999999999884

>KOG0192|consensus

Probab=99.93  E-value=9.4e-27  Score=178.22  Aligned_cols=154  Identities=18%  Similarity=0.249  Sum_probs=128.6

Q ss_pred             CCCChHHHHHHhcCCCCCC-CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhc
Q psy1684           4 GKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKD   80 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~-g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~   80 (189)
                      ..++|+|+++++|.|..+. +..||+|+++++.     +..                 +++.  +..+++...+.+..++
T Consensus        94 ~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs-----L~~-----------------~l~~~~~~~l~~~~~l~~aldi  151 (362)
T KOG0192|consen   94 SRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS-----LSV-----------------LLHKKRKRKLPLKVRLRIALDI  151 (362)
T ss_pred             HhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc-----HHH-----------------HHhhcccCCCCHHHHHHHHHHH
Confidence            3589999999999998877 6899999999843     333                 3333  3456678888889999


Q ss_pred             cCCceeeccCC-cccccc-cc-------------------------------------cccccCC---CCCccc-e-EEE
Q psy1684          81 ADGLCVNLRKP-CVQVSC-RI-------------------------------------YLVHGTN---LSGVVV-S-AVD  116 (189)
Q Consensus        81 a~gl~~~~~~~-~~~~~~-p~-------------------------------------~l~~~~~---~~~~~~-s-Vws  116 (189)
                      |.|+.|+|... +||||+ |+                                     |||||..   ..+|+. + |||
T Consensus       152 ArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvyS  231 (362)
T KOG0192|consen  152 ARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYS  231 (362)
T ss_pred             HHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhh
Confidence            99999999998 899986 43                                     5555553   346999 9 999


Q ss_pred             ec------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         117 FG------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       117 fG------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      ||            |.++++.++...+ ..+.|+++|..||+.+..||.+||+.||+.||+|.+|+..|+.+.+..
T Consensus       232 FgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  232 FGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence            99            9999998888887 588999999999999999999999999999999999999999887743

>KOG0200|consensus

Probab=99.92  E-value=7.1e-26  Score=184.97  Aligned_cols=165  Identities=22%  Similarity=0.271  Sum_probs=129.2

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhccCC
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a~g   83 (189)
                      ..|+|++.+||.|.+....++|.|+... |++.-.++.  ..   .  ............  ..+...+|+.+..|+|.|
T Consensus       359 g~H~niv~llG~~t~~~~~~~v~Ey~~~-G~L~~~Lr~--~r---~--~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~G  430 (609)
T KOG0200|consen  359 GKHPNIVNLLGACTQDGPLYVIVEYAEH-GDLLEFLRK--KR---V--TESIDGSGVFPNERDALTTKDLLSFAYQIANG  430 (609)
T ss_pred             cCCcchhhheeeeccCCceEEEEEeccC-CcHHHHHHh--cc---c--cccccccCCCccccCCcCHHHHHHHHHHHHHH
Confidence            4699999999999887889999999998 433222332  11   0  000000011111  125589999999999999


Q ss_pred             ceeeccCCcccccccc----------------cccccC-------------------------CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSCRI----------------YLVHGT-------------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~p~----------------~l~~~~-------------------------~~~~~~~-s-VwsfG--  118 (189)
                      +.++...+|+|||++.                |||++.                         ....|+. | |||||  
T Consensus       431 Me~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~  510 (609)
T KOG0200|consen  431 MEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGIL  510 (609)
T ss_pred             HHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHH
Confidence            9999999999999766                555432                         3467999 9 99999  


Q ss_pred             -----------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 -----------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 -----------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                 |+++. ..++.+.+.+|.|++.|..|+.++|+||..||+.+|++||+|+++.+.|+..+..
T Consensus       511 L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~  582 (609)
T KOG0200|consen  511 LWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD  582 (609)
T ss_pred             HHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence                       99987 7888888999999999999999999999999999999999999999999997653

>KOG4721|consensus

Probab=99.90  E-value=2.8e-25  Score=173.07  Aligned_cols=149  Identities=15%  Similarity=0.226  Sum_probs=126.6

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      .++|.|+|++.++|+|.+....+||+|++..+. +.-                     .|.....+.-.-|++|...+|.
T Consensus       166 LRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq-L~~---------------------VLka~~~itp~llv~Wsk~IA~  223 (904)
T KOG4721|consen  166 LRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ-LYE---------------------VLKAGRPITPSLLVDWSKGIAG  223 (904)
T ss_pred             HHhccCcceeeEeeeecCCceeEEeeecccccc-HHH---------------------HHhccCccCHHHHHHHHHHhhh
Confidence            357899999999999999999999999999833 211                     1222444555668899999999


Q ss_pred             CceeeccCCcccccccc------------------------------------cccccC-CCCCccc-e-EEEec-----
Q psy1684          83 GLCVNLRKPCVQVSCRI------------------------------------YLVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      |+.|+|...|||||+..                                    |||+|+ +..+.++ . |||||     
T Consensus       224 GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWE  303 (904)
T KOG4721|consen  224 GMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWE  303 (904)
T ss_pred             hhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHH
Confidence            99999999999999644                                    777777 6677999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                             |.+++...|+..|. +-..+|.|..||..++-||++||+..|..||+|.+|+..|+
T Consensus       304 mLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  304 MLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             HHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence                   89998888888884 45789999999999999999999999999999999999985

>KOG0199|consensus

Probab=99.88  E-value=3.2e-24  Score=170.39  Aligned_cols=145  Identities=19%  Similarity=0.300  Sum_probs=118.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      +|.|+++++|+|+... ...++|.|..+. |    |+..                 -|++  +..|-+.-|.+|+.++|.
T Consensus       167 ~L~H~hliRLyGvVl~-qp~mMV~ELapl-G----SLld-----------------rLrka~~~~llv~~Lcdya~QiA~  223 (1039)
T KOG0199|consen  167 KLQHPHLIRLYGVVLD-QPAMMVFELAPL-G----SLLD-----------------RLRKAKKAILLVSRLCDYAMQIAK  223 (1039)
T ss_pred             hccCcceeEEeeeecc-chhhHHhhhccc-c----hHHH-----------------HHhhccccceeHHHHHHHHHHHHH
Confidence            6789999999987764 678889998887 4    2333                 1111  222336778889999999


Q ss_pred             CceeeccCCcccccccc----------------cccccC-------------------------CCCCccc-e-EEEec-
Q psy1684          83 GLCVNLRKPCVQVSCRI----------------YLVHGT-------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~----------------~l~~~~-------------------------~~~~~~~-s-VwsfG-  118 (189)
                      |+.|+-.+.+||||+..                ||.+-.                         +..+||. | ||+|| 
T Consensus       224 aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGV  303 (1039)
T KOG0199|consen  224 AMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGV  303 (1039)
T ss_pred             HHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhh
Confidence            99999999999999755                222211                         7889999 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                                  |.|.+..+|++.|..|.|++.|+.||++||++|.+||+.+|.+||||..|...+
T Consensus       304 TiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  304 TIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             hHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence                        888999999999999999999999999999999999999999999999998554

>KOG1025|consensus

Probab=99.87  E-value=1.8e-23  Score=168.53  Aligned_cols=153  Identities=20%  Similarity=0.265  Sum_probs=129.2

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a   81 (189)
                      ++.+.|+|+++||++|..+. ..||+++++.+.     +.+                 |+.. +..+...+++++..|+|
T Consensus       752 masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~-----LlD-----------------yvr~hr~~igsq~lLnw~~QIA  808 (1177)
T KOG1025|consen  752 MASLDHPNLLRLLGVCMLST-LQLVTQLMPLGC-----LLD-----------------YVREHRDNIGSQDLLNWCYQIA  808 (1177)
T ss_pred             HhcCCCchHHHHhhhcccch-HHHHHHhcccch-----HHH-----------------HHHHhhccccHHHHHHHHHHHH
Confidence            46899999999999998766 788999999733     333                 2322 22344889999999999


Q ss_pred             CCceeeccCCcccccccc----------------cccc-----------------------cC-CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKPCVQVSCRI----------------YLVH-----------------------GT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~----------------~l~~-----------------------~~-~~~~~~~-s-VwsfG-  118 (189)
                      +||.|++....+|||+..                ++++                       +. ....|+. | ||||| 
T Consensus       809 kgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGV  888 (1177)
T KOG1025|consen  809 KGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGV  888 (1177)
T ss_pred             HHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhh
Confidence            999999999999998755                2222                       11 6678999 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |.+++..+|-..++.|.|++.|+.|+.++|.+|.+||..|+..||+|+++...+.++.+.
T Consensus       889 tiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  889 TIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             hHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence                        899999999999999999999999999999999999999999999999999999998874

>KOG0193|consensus

Probab=99.86  E-value=5.1e-23  Score=161.08  Aligned_cols=153  Identities=18%  Similarity=0.244  Sum_probs=120.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ++-.|.|++=++|.|.+ ++..||+..+.+...|     .       |..+.         ..+|.+..+++.++++++|
T Consensus       443 kkTRH~NIlLFMG~~~~-p~~AIiTqwCeGsSLY-----~-------hlHv~---------etkfdm~~~idIAqQiaqG  500 (678)
T KOG0193|consen  443 KKTRHENILLFMGACMN-PPLAIITQWCEGSSLY-----T-------HLHVQ---------ETKFDMNTTIDIAQQIAQG  500 (678)
T ss_pred             hhcchhhheeeehhhcC-CceeeeehhccCchhh-----h-------hccch---------hhhhhHHHHHHHHHHHHHh
Confidence            35568888888887764 4457777776652211     1       21121         2357789999999999999


Q ss_pred             ceeeccCCcccccccc---------------------------------------cccccC----CCCCccc-e-EEEec
Q psy1684          84 LCVNLRKPCVQVSCRI---------------------------------------YLVHGT----NLSGVVV-S-AVDFG  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~p~---------------------------------------~l~~~~----~~~~~~~-s-VwsfG  118 (189)
                      +.|+|.+.|||||+..                                       |||+|+    ...+||. | |||||
T Consensus       501 M~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFG  580 (678)
T KOG0193|consen  501 MDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFG  580 (678)
T ss_pred             hhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhh
Confidence            9999999999999766                                       555555    6788999 9 99999


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCP----PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |..-..++|+..|.+|+-++.+    .+||.++++|+..||..++++||.|.+|+..|+.++.+
T Consensus       581 iV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  581 IVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence                        8866778999999999765543    57999999999999999999999999999999888763

>KOG1094|consensus

Probab=99.84  E-value=5.3e-23  Score=160.67  Aligned_cols=151  Identities=21%  Similarity=0.333  Sum_probs=116.0

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKD   80 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~   80 (189)
                      ++.++|||+++|+|+|..+++..+|+|++.+ |++    +.                 |+...  ....-...+..+.++
T Consensus       589 LsqLkhPNIveLvGVC~~DePicmI~EYmEn-GDL----nq-----------------Fl~aheapt~~t~~~vsi~tqi  646 (807)
T KOG1094|consen  589 LSRLKHPNIVELLGVCVQDDPLCMITEYMEN-GDL----NQ-----------------FLSAHELPTAETAPGVSICTQI  646 (807)
T ss_pred             HhccCCCCeeEEEeeeecCCchHHHHHHHhc-CcH----HH-----------------HHHhccCcccccchhHHHHHHH
Confidence            3578999999999999999999999999999 532    22                 22111  011123344567777


Q ss_pred             cCCceeeccCCcccccccc----------------cccccC------------------------CCCCccc-e-EEEec
Q psy1684          81 ADGLCVNLRKPCVQVSCRI----------------YLVHGT------------------------NLSGVVV-S-AVDFG  118 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~p~----------------~l~~~~------------------------~~~~~~~-s-VwsfG  118 (189)
                      +.|++|+.+-.++|||+..                ||++..                        ..++||+ | ||+||
T Consensus       647 asgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafg  726 (807)
T KOG1094|consen  647 ASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFG  726 (807)
T ss_pred             HHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhH
Confidence            8888888888888888644                455433                        6789999 9 99999


Q ss_pred             --------------CCCCChHHHHHHHHc----C---CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 --------------SGGMTNAEVLHQVEH----G---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 --------------~~~~~~~~~~~~v~~----g---~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                                    |..++.+++.+....    +   .-++.|.-||.+++++|.+||..|..+||+|++|...|.+.
T Consensus       727 vTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  727 VTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                          899999888876532    1   23678999999999999999999999999999999888653

>KOG1024|consensus

Probab=99.84  E-value=2.7e-22  Score=150.52  Aligned_cols=160  Identities=21%  Similarity=0.247  Sum_probs=116.8

Q ss_pred             CCCChHHHHHHhcCCCCC-CCcEEEecCCCCCCceEEEEEecCCCeeeEEE-EEeccCCccCCCCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTT-GRSLFETQKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~-~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~-i~~~~~gyl~~~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|+..+++++... +-.|++...+.- |.            .+.|. +.+.++  -.....+.-.+++....|.+
T Consensus       342 y~~sH~nll~V~~V~ie~~~~P~V~y~~~~~-gN------------LK~FL~~Cr~~~--~~~aqtvtt~qlV~masQla  406 (563)
T KOG1024|consen  342 YGASHPNLLSVLGVSIEDYATPFVLYPATGV-GN------------LKSFLQICRGDD--PSYAQTVTTIQLVLMASQLA  406 (563)
T ss_pred             hcCcCCCccceeEEEeeccCcceEEEeccCc-ch------------HHHHHHHhccCC--CccccchhHHHHHHHHHHHH
Confidence            356788888888877543 223555555443 21            11111 111000  00112233456777888888


Q ss_pred             CCceeeccCCcccccccc---------------------------------------cccccC-CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKPCVQVSCRI---------------------------------------YLVHGT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~---------------------------------------~l~~~~-~~~~~~~-s-VwsfG-  118 (189)
                      -++.++|...++|.|+..                                       ||+.|. ....||. | ||||| 
T Consensus       407 ~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGV  486 (563)
T KOG1024|consen  407 MAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGV  486 (563)
T ss_pred             HHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHH
Confidence            899999999999988655                                       333332 5677999 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |.++++.++...+++|+|+..|.+||.+++.+|..||+..|++||+|+|++.-|.++..+
T Consensus       487 llWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  487 LLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             HHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence                        999999999999999999999999999999999999999999999999999999887653

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.79  E-value=5.3e-22  Score=147.09  Aligned_cols=146  Identities=21%  Similarity=0.361  Sum_probs=107.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|+++++|.+......++|.|+++. |    ++..                 +|...  ..++...+..+..+++.
T Consensus        57 ~l~h~ni~~~~g~~~~~~~~~lv~e~~~~-g----~L~~-----------------~L~~~~~~~~~~~~~~~i~~~i~~  114 (259)
T PF07714_consen   57 KLRHPNIVKLYGFCIENEPLFLVMEYCPG-G----SLDD-----------------YLKSKNKEPLSEQQRLSIAIQIAE  114 (259)
T ss_dssp             THSBTTBE-EEEEEESSSSEEEEEE--TT-E----BHHH-----------------HHHHTCTTTSBHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccc-c----cccc-----------------cccccccccccccccccccccccc
Confidence            46889999999888766667888888776 3    1222                 33333  34456777888888999


Q ss_pred             CceeeccCCcccccccc---------------------------------------cccccC-CCCCccc-e-EEEec--
Q psy1684          83 GLCVNLRKPCVQVSCRI---------------------------------------YLVHGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~---------------------------------------~l~~~~-~~~~~~~-s-VwsfG--  118 (189)
                      |+.++|...++|+++..                                       |+++|. ....++. + |||||  
T Consensus       115 ~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~  194 (259)
T PF07714_consen  115 ALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGML  194 (259)
T ss_dssp             HHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999987532                                       222222 3445788 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                                 |.+.+..++...+.++.+++.|..||..+++||.+||+.||.+||||.+|++.|
T Consensus       195 l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  195 LYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence                       777788888999999999999999999999999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PHA02988 hypothetical protein; Provisional

Probab=99.78  E-value=4.4e-20  Score=138.53  Aligned_cols=152  Identities=14%  Similarity=0.141  Sum_probs=103.9

Q ss_pred             CCCChHHHHHHhcCCCC----CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPEN----DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~----~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~   79 (189)
                      ..+.|+|++++++.+..    ....+||+|+++++.     +..                 ++.....+.....+.+..+
T Consensus        73 ~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~-----L~~-----------------~l~~~~~~~~~~~~~i~~~  130 (283)
T PHA02988         73 RRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGY-----LRE-----------------VLDKEKDLSFKTKLDMAID  130 (283)
T ss_pred             HhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCc-----HHH-----------------HHhhCCCCChhHHHHHHHH
Confidence            35677777777765432    123467777766522     111                 2332333344445556666


Q ss_pred             ccCCceeeccC-Ccccccc-cc---------------c------------------ccccCC---CCCccc-e-EEEec-
Q psy1684          80 DADGLCVNLRK-PCVQVSC-RI---------------Y------------------LVHGTN---LSGVVV-S-AVDFG-  118 (189)
Q Consensus        80 ~a~gl~~~~~~-~~~~~~~-p~---------------~------------------l~~~~~---~~~~~~-s-VwsfG-  118 (189)
                      .+.|+.++|.. .++|+|+ |+               |                  +++|..   .+.|+. + ||||| 
T Consensus       131 i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGv  210 (283)
T PHA02988        131 CCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGV  210 (283)
T ss_pred             HHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHH
Confidence            67777777763 6667775 33               1                  222222   257899 9 99999 


Q ss_pred             -----------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 -----------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                 |.+.+..++...+ ..+.+++.|..||+++.+||.+||+.||++||||++|++.|+.+..
T Consensus       211 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        211 VLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence                       7777777877776 4566777888899999999999999999999999999999987643

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.77  E-value=5.5e-20  Score=136.70  Aligned_cols=149  Identities=19%  Similarity=0.295  Sum_probs=109.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .+.|+|++++++.+......+||+|+++.+.     +..                 ++.. ...+...++..+..+.+.|
T Consensus        62 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~l~~~~~~~~~~~i~~a  119 (266)
T cd05064          62 QFDHSNIVRLEGVITRGNTMMIVTEYMSNGA-----LDS-----------------FLRKHEGQLVAGQLMGMLPGLASG  119 (266)
T ss_pred             cCCCCCcCeEEEEEecCCCcEEEEEeCCCCc-----HHH-----------------HHHhCCCCCCHHHHHHHHHHHHHH
Confidence            4678888887776666666788888777622     111                 2221 1234456667777788888


Q ss_pred             ceeeccCCcccccc-cc-------------------------------------cccccC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI-------------------------------------YLVHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~-------------------------------------~l~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |.                                     ++++|. ..+.++. + |||||    
T Consensus       120 l~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  199 (266)
T cd05064         120 MKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMW  199 (266)
T ss_pred             HHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHH
Confidence            88888888888885 33                                     111221 3456788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                               |.+.+..+++..+.++.+++.|..+|..+.+++.+||+.+|++||++.+|.+.|+.+
T Consensus       200 ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         200 EVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                     445666778888888888888999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0581|consensus

Probab=99.73  E-value=1.8e-18  Score=128.86  Aligned_cols=106  Identities=20%  Similarity=0.207  Sum_probs=84.9

Q ss_pred             CCcCHhHHHHHhhhccCCceeecc-CCcccccc-cc----------------------------------cccccC-CCC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLR-KPCVQVSC-RI----------------------------------YLVHGT-NLS  108 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~-~~~~~~~~-p~----------------------------------~l~~~~-~~~  108 (189)
                      ..+.-..|-....++.+||.|+|. ..|+|||+ |+                                  .||+|- .++
T Consensus       173 g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~  252 (364)
T KOG0581|consen  173 GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGE  252 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCC
Confidence            345545566667788899999995 89999996 65                                  233332 567


Q ss_pred             Cccc-e-EEEec------------CCC-----CChHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGG-----MTNAEVLHQVEHGYRMPCPPG-CPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~-----~~~~~~~~~v~~g~~~~~p~~-~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                      .|+. + |||||            |+.     .+..+++..|..+..|..|.. +++++..++..|+++||++||+.+|+
T Consensus       253 ~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qL  332 (364)
T KOG0581|consen  253 SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQL  332 (364)
T ss_pred             cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence            8999 9 99999            333     346788888999988888987 99999999999999999999999999


Q ss_pred             HHH
Q psy1684         169 QWK  171 (189)
Q Consensus       169 ~~~  171 (189)
                      +..
T Consensus       333 l~H  335 (364)
T KOG0581|consen  333 LQH  335 (364)
T ss_pred             hcC
Confidence            864

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.72  E-value=3.4e-18  Score=126.79  Aligned_cols=150  Identities=22%  Similarity=0.386  Sum_probs=109.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+......++|+|+++++.     +..                 ++..  ...+....+..+..+.+.
T Consensus        58 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~l~~~~~~~~~~ql~~  115 (263)
T cd05052          58 EIKHPNLVQLLGVCTREPPFYIITEFMTYGN-----LLD-----------------YLRECNRQEVNAVVLLYMATQISS  115 (263)
T ss_pred             hCCCCChhheEEEEcCCCCcEEEEEeCCCCc-----HHH-----------------HHHhCCCCCCCHHHHHHHHHHHHH
Confidence            5678888888887777777788888877632     111                 1111  112334455566677777


Q ss_pred             CceeeccCCcccccc-cc---------------c----------------------ccccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y----------------------LVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~----------------------l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |.               +                      +++|. ....++. + |||||   
T Consensus       116 ~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il  195 (263)
T cd05052         116 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL  195 (263)
T ss_pred             HHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHH
Confidence            888888888888875 33               1                      11221 3455788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                                |++.+..++...+..+.+++.|..+|.++.+++.+||..||++|||+.++.+.|++++
T Consensus       196 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  263 (263)
T cd05052         196 WEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF  263 (263)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence                      4555667777778888888889999999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.70  E-value=6.8e-18  Score=126.30  Aligned_cols=156  Identities=19%  Similarity=0.276  Sum_probs=108.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+. ....++|.++.+++.     +..                 ++.. ...+....+..+..+.+.
T Consensus        64 ~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gs-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  120 (279)
T cd05111          64 GSLDHAYIVRLLGICP-GASLQLVTQLSPLGS-----LLD-----------------HVRQHRDSLDPQRLLNWCVQIAK  120 (279)
T ss_pred             hcCCCCCcceEEEEEC-CCccEEEEEeCCCCc-----HHH-----------------HHHhcccCCCHHHHHHHHHHHHH
Confidence            3456677777666543 233455566555421     111                 2322 223445666777778888


Q ss_pred             CceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec--
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      |+.++|..+++|+|+ |.               ++++                       |. ..+.++. + |||||  
T Consensus       121 ~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i  200 (279)
T cd05111         121 GMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVT  200 (279)
T ss_pred             HHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHH
Confidence            889999888888885 43               2221                       11 3356888 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                                 |.+.+..++...+.++.+++.|..|+.++..++.+||..||++|||+.++++.|..+.+.+ |.|
T Consensus       201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~-~~~  275 (279)
T cd05111         201 VWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP-PRY  275 (279)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC-cce
Confidence                       4455566666677888888888899999999999999999999999999999999988744 555

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.70  E-value=5.8e-18  Score=126.70  Aligned_cols=164  Identities=17%  Similarity=0.278  Sum_probs=109.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......++++|+..++. +.-.+..  ......  .. ..++-......+....+..+..+.+.++
T Consensus        64 ~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~-L~~~l~~--~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~~~~l~~al  137 (283)
T cd05048          64 DLQHPNIVCLLGVCTKEQPTCMLFEYLAHGD-LHEFLVR--NSPHSD--VG-AESGDETVKSSLDCSDFLHIAIQIAAGM  137 (283)
T ss_pred             hcCCcccceEEEEEcCCCceEEEEecCCCCc-HHHHHHh--cCCCcc--cc-cccccccccCCCCHHHHHHHHHHHHHHH
Confidence            4678888888877666666788888877632 1100000  000000  00 0000000012333566667777888889


Q ss_pred             eeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+               +++                       +|. ..+.++. + |||||    
T Consensus       138 ~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~  217 (283)
T cd05048         138 EYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLW  217 (283)
T ss_pred             HHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHH
Confidence            9999988888885 44               222                       111 3356788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                               |.+.+..++...+.++..++.|..+|.++.+|+.+||+.||++||++++|++.|+.
T Consensus       218 el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         218 EIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                     44556678888888888888899999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.70  E-value=8.5e-18  Score=129.05  Aligned_cols=110  Identities=27%  Similarity=0.449  Sum_probs=86.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~  107 (189)
                      +...+++.+..+.+.|+.++|..+++|+|+ |+               |+++                       |. ..
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  250 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD  250 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc
Confidence            446677888889999999999999999996 44               3332                       11 23


Q ss_pred             CCccc-e-EEEec-------------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||             |++... ..+...+..+.++..|..+|+++.+|+.+||+.||++|||+.+|++.
T Consensus       251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~  330 (338)
T cd05102         251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEI  330 (338)
T ss_pred             CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            45788 9 99999             333332 34555567777777888999999999999999999999999999999


Q ss_pred             HHHHHh
Q psy1684         172 LEDFFT  177 (189)
Q Consensus       172 l~~~~~  177 (189)
                      |+.+++
T Consensus       331 l~~~~~  336 (338)
T cd05102         331 LGDLLQ  336 (338)
T ss_pred             HHHHHh
Confidence            999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.69  E-value=1.8e-17  Score=124.70  Aligned_cols=174  Identities=15%  Similarity=0.190  Sum_probs=119.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..++|+|+.+++. +.-.+.. .......  +..  ..-......++....+....+.+.+
T Consensus        62 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L~~~i~~-~~~~~~~--~~~--~~~~~~~~~~~~~~~~~i~~~i~~a  135 (291)
T cd05094          62 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD-LNKFLRA-HGPDAMI--LVD--GQPRQAKGELGLSQMLHIASQIASG  135 (291)
T ss_pred             hcCCCCCcceEEEEEccCCceEEEEecCCCCc-HHHHHHh-cCccccc--ccc--cccccCcCCCCHHHHHHHHHHHHHH
Confidence            45789999999888877778899999888632 2100000 0000000  000  0000011234466677777888888


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               +++                       +|. ....++. + |||||   
T Consensus       136 l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  215 (291)
T cd05094         136 MVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL  215 (291)
T ss_pred             HHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence            99999999999886 44               222                       111 3355788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCC
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYK  184 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~  184 (189)
                                |...+..++...+..+..+..+..+|.++.+++.+||+.||++|||+.+|++.|+.+.. +.|.|.
T Consensus       216 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~-~~~~~~  290 (291)
T cd05094         216 WEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK-ATPIYL  290 (291)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh-hcCccc
Confidence                      44455667777777887777788899999999999999999999999999999999876 456664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.68  E-value=2.5e-17  Score=124.69  Aligned_cols=167  Identities=21%  Similarity=0.265  Sum_probs=116.5

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEe-cCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYK-RSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~-~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++++++.+......+||+|+... +.+.-.+.. ...+....+.+.      ......+.+..++.+..+.+.|+.
T Consensus        79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~qi~~al~  151 (304)
T cd05101          79 KHKNIINLLGACTQDGPLYVIVEYASK-GNLREYLRARRPPGMEYSYDIA------RVPDEQMTFKDLVSCTYQVARGME  151 (304)
T ss_pred             cCCCchheeEEEecCCceEEEEecCCC-CcHHHHHHhcCCcccccccccc------cCCcccccHHHHHHHHHHHHHHHH
Confidence            688999988877767778899998876 322100000 000000000000      001223446677778888899999


Q ss_pred             eeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |.               +++                       +|. ....++. + |||||     
T Consensus       152 ~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  231 (304)
T cd05101         152 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  231 (304)
T ss_pred             HHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHH
Confidence            999999999986 44               111                       111 2345788 9 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                              |.+.+..++...+..+.++..|..+|.++.+|+.+||+.+|++|||+.+|++.|+.++....
T Consensus       232 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~  301 (304)
T cd05101         232 IFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT  301 (304)
T ss_pred             HHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence                    44456778888888888888888999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.68  E-value=2.6e-17  Score=121.84  Aligned_cols=108  Identities=26%  Similarity=0.420  Sum_probs=82.7

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc-------------------------ccC-CC
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV-------------------------HGT-NL  107 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~-------------------------~~~-~~  107 (189)
                      ..+++.+..+.+.|+.++|..+++|+|+ |.               +++                         +|. ..
T Consensus        97 ~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (262)
T cd05058          97 VKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT  176 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhcc
Confidence            4555666667777888888888888775 33               222                         111 23


Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ..++. + |||||             |.+.+..++...+..+..++.|..+|..+.+++.+||+.+|++||++.+|++.|
T Consensus       177 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l  256 (262)
T cd05058         177 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRI  256 (262)
T ss_pred             CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence            55788 8 99999             444556667777777877777888999999999999999999999999999999


Q ss_pred             HHHHh
Q psy1684         173 EDFFT  177 (189)
Q Consensus       173 ~~~~~  177 (189)
                      ++++.
T Consensus       257 ~~~~~  261 (262)
T cd05058         257 EQIFS  261 (262)
T ss_pred             HHHhc
Confidence            98864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.68  E-value=1.2e-17  Score=123.36  Aligned_cols=109  Identities=27%  Similarity=0.469  Sum_probs=82.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c------------------------ccccC-
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y------------------------LVHGT-  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~------------------------l~~~~-  105 (189)
                      .++...+..+..+.+.++.++|...++|+|+ |.               +                        +++|. 
T Consensus        91 ~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (257)
T cd05116          91 HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECM  170 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHh
Confidence            3444555556666677777777777777765 33               1                        11111 


Q ss_pred             CCCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 NLSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ....++. + |||||             |.+.+..++...+.++.+++.|..+|+++.+||.+||+.||++||+|.+|..
T Consensus       171 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         171 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            2345778 8 99999             5556667788888888888889999999999999999999999999999999


Q ss_pred             HHHHH
Q psy1684         171 KLEDF  175 (189)
Q Consensus       171 ~l~~~  175 (189)
                      .|++.
T Consensus       251 ~l~~~  255 (257)
T cd05116         251 RLRNY  255 (257)
T ss_pred             HHhcc
Confidence            99765

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.68  E-value=1.3e-17  Score=124.91  Aligned_cols=165  Identities=19%  Similarity=0.319  Sum_probs=111.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..+++.++...+....+....     ..+..+..... .......+....+..+..+.+.|
T Consensus        63 ~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ql~~a  136 (283)
T cd05091          63 SRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMR-----SPHSDVGSTDD-DKTVKSTLEPADFVHIVTQIAAG  136 (283)
T ss_pred             hcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhc-----CCCcccccccc-ccccccccCHHHHHHHHHHHHHH
Confidence            4577888888887776666778888877653211000000     00000000000 00112234456667777888889


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               ++++..                        ..+.++. + |||||   
T Consensus       137 L~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l  216 (283)
T cd05091         137 MEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL  216 (283)
T ss_pred             HHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence            99999999999986 44               222111                        2355788 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                                |.+....++...+..+...+.|..+|.++.+|+.+||+.+|++||+|++|+..|++
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         217 WEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                      44556678888888888788889999999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.68  E-value=2.7e-17  Score=125.16  Aligned_cols=151  Identities=20%  Similarity=0.241  Sum_probs=106.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+.. +..++|.+++..+.     +..                 ++... ..+....+..+..+++.|
T Consensus        65 ~l~h~niv~~~g~~~~-~~~~~v~e~~~~g~-----l~~-----------------~l~~~~~~~~~~~~~~~~~qi~~~  121 (316)
T cd05108          65 SVDNPHVCRLLGICLT-STVQLITQLMPFGC-----LLD-----------------YVREHKDNIGSQYLLNWCVQIAKG  121 (316)
T ss_pred             hCCCCCCCeEEEEEcC-CCceeeeecCCCCC-----HHH-----------------HHHhccccCCHHHHHHHHHHHHHH
Confidence            4567777777765543 34456666655422     111                 22221 123355566777788889


Q ss_pred             ceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |+               |+++                       |. ....++. + |||||   
T Consensus       122 L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l  201 (316)
T cd05108         122 MNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV  201 (316)
T ss_pred             HHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHH
Confidence            99999999999985 44               2221                       11 3355788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                |.+....++...+..+.+++.|..|+.++.+++.+||..||++||+|.+|+..|..+...
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         202 WELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence                      445556666666678888888899999999999999999999999999999999888763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.67  E-value=2.4e-17  Score=128.43  Aligned_cols=107  Identities=28%  Similarity=0.488  Sum_probs=83.0

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CCC
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLS  108 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~  108 (189)
                      ....+..+..+++.|+.++|..+++|+|+ |.               |++.                       |. ...
T Consensus       212 ~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  291 (375)
T cd05104         212 DTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNC  291 (375)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCC
Confidence            35567778888999999999999999986 44               2221                       11 234


Q ss_pred             Cccc-e-EEEec-------------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      .++. + |||||             |.+... ..+...+..+.++..|..+|.++++|+.+||+.||++||||++|++.|
T Consensus       292 ~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l  371 (375)
T cd05104         292 VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLI  371 (375)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            5788 9 99999             334433 345555677877778888999999999999999999999999999999


Q ss_pred             HHH
Q psy1684         173 EDF  175 (189)
Q Consensus       173 ~~~  175 (189)
                      +..
T Consensus       372 ~~~  374 (375)
T cd05104         372 EQQ  374 (375)
T ss_pred             Hhh
Confidence            864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.67  E-value=9.2e-17  Score=120.83  Aligned_cols=163  Identities=21%  Similarity=0.296  Sum_probs=110.3

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      +|+|++++++.+......++|+|+.+.+..... +..  . .....   ..... .......+....++.+..+.+.|+.
T Consensus        74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~-l~~--~-~~~~~---~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~  146 (293)
T cd05053          74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDF-LRA--R-RPPGE---YASPDDPRPPEETLTQKDLVSFAYQVARGME  146 (293)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHH-HHh--c-CCCcc---ccccccccccccccCHHHHHHHHHHHHHHHH
Confidence            577777777766666667788887776321110 000  0 00000   00000 1111233446667777788888999


Q ss_pred             eeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |.               ++                       ++|. ....++. + |||||     
T Consensus       147 ~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  226 (293)
T cd05053         147 FLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWE  226 (293)
T ss_pred             HHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHH
Confidence            999999999875 44               21                       1221 3345788 9 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                              |.+.+..++...+..+.+++.|..++.++.+|+.+||..||++|||+.++++.|+.++
T Consensus       227 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         227 IFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence                    4455667777778888888888899999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.67  E-value=2.1e-17  Score=122.27  Aligned_cols=149  Identities=22%  Similarity=0.395  Sum_probs=103.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .+.|+|++++++.+. .+..++|+|+.+. +.    +..                 ++.. ...+....+..+..+.+.|
T Consensus        51 ~l~h~~ii~~~~~~~-~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~~~~~~i~~~  107 (257)
T cd05115          51 QLDNPYIVRMIGVCE-AEALMLVMEMASG-GP----LNK-----------------FLSGKKDEITVSNVVELMHQVSMG  107 (257)
T ss_pred             hcCCCCeEEEEEEEc-CCCeEEEEEeCCC-CC----HHH-----------------HHHhCCCCCCHHHHHHHHHHHHHH
Confidence            456666666666543 3345666666554 21    111                 2221 2234455666666777778


Q ss_pred             ceeeccCCcccccc-cc---------------ccc------------------------ccC-CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV------------------------HGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~------------------------~~~-~~~~~~~-s-VwsfG--  118 (189)
                      +.++|..+++|+|+ |.               +++                        +|. ....++. + |||||  
T Consensus       108 l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05115         108 MKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGIT  187 (257)
T ss_pred             HHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHH
Confidence            88888888888875 33               111                        111 2345788 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                                 |.+.+..++...+..|.+++.|..+++++.++|.+||..||++||+|.+|.+.|+.++
T Consensus       188 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~  256 (257)
T cd05115         188 MWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY  256 (257)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence                       4556677788888888888899999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.67  E-value=5e-17  Score=120.22  Aligned_cols=150  Identities=23%  Similarity=0.458  Sum_probs=106.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+......++|+|+...+.     +..                 ++..  ...+....+..+..+..
T Consensus        57 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~~i~  114 (261)
T cd05148          57 KRLRHKHLISLFAVCSVGEPVYIITELMEKGS-----LLA-----------------FLRSPEGQVLPVASLIDMACQVA  114 (261)
T ss_pred             hcCCCcchhheeeeEecCCCeEEEEeecccCC-----HHH-----------------HHhcCCCCCCCHHHHHHHHHHHH
Confidence            35678888888776666666778888776532     111                 1111  11233455555666667


Q ss_pred             CCceeeccCCcccccc-cc---------------c---------------------ccccC-CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------Y---------------------LVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~---------------------l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      .++.++|..+++|+|+ |.               +                     +++|. ..+.++. + |||||   
T Consensus       115 ~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l  194 (261)
T cd05148         115 EGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL  194 (261)
T ss_pred             HHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHH
Confidence            7777778777777775 33               1                     11221 3356788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                                |.+.+..++...+..+.+++.|..+|+++.++|.+||+.||++|||+++|.+.|+.+
T Consensus       195 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         195 YEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                      455666778888888888888899999999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.66  E-value=9.7e-17  Score=121.10  Aligned_cols=165  Identities=22%  Similarity=0.296  Sum_probs=114.3

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC---CCCCcCHhHHHHHhhhccCC
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA---GRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~---~~~~~~l~~li~~~~~~a~g   83 (189)
                      .|+|++++++.+......++|+|+.+.+....+....   ...      ........   ....+....+..+..+.+.|
T Consensus        61 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~------~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  131 (297)
T cd05089          61 HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKS---RVL------ETDPAFAKEHGTASTLTSQQLLQFASDVATG  131 (297)
T ss_pred             CCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhc---ccc------ccccccccccCccCCCCHHHHHHHHHHHHHH
Confidence            5889998888776666688999987763211110000   000      00000000   01123466677778888899


Q ss_pred             ceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|+|+ |+               |++                    +|. ....++. + |||||      
T Consensus       132 l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el  211 (297)
T cd05089         132 MQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI  211 (297)
T ss_pred             HHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence            99999999999986 44               222                    111 2345788 9 99999      


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                             |.+.+..++...+..+.+++.|..++.++.+|+.+||..||.+|||+.+|++.|+.+++..+
T Consensus       212 ~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~  280 (297)
T cd05089         212 VSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK  280 (297)
T ss_pred             HcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence                   44556677777788888888888999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.66  E-value=3.4e-17  Score=123.08  Aligned_cols=173  Identities=18%  Similarity=0.239  Sum_probs=117.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC--CCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG--RTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~--~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+...+..++|+|+..++. +.-.+... ......+........  +...  ...+....+..+..+
T Consensus        58 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  135 (290)
T cd05045          58 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS-LRSFLRES-RKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQ  135 (290)
T ss_pred             hhCCCCCEeeEEEEEecCCCcEEEEEecCCCC-HHHHHHhc-CCccccccccccccccccccCccccccCHHHHHHHHHH
Confidence            45789999999888777778899999887632 21000000 000000000000000  1111  123446667777888


Q ss_pred             ccCCceeeccCCcccccc-cc---------------ccccc-----------------------C-CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVHG-----------------------T-NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~~-----------------------~-~~~~~~~-s-Vwsf  117 (189)
                      .+.|+.++|..+++|+|+ |.               ++++.                       . ....++. + ||||
T Consensus       136 i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~sl  215 (290)
T cd05045         136 ISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSF  215 (290)
T ss_pred             HHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHH
Confidence            889999999999999986 44               22211                       0 2344688 8 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      |             |++..+.++...+..+.+++.|..++.++.+++.+||+.||++||++++|++.|++++..
T Consensus       216 G~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         216 GVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            9             445567778777888888888899999999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.66  E-value=5.6e-17  Score=120.40  Aligned_cols=149  Identities=24%  Similarity=0.349  Sum_probs=103.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++........++|+|+..++.     +..                 ++.. ...+....+..+..+.+.|
T Consensus        61 ~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~l~~~  118 (266)
T cd05033          61 QFDHPNIIRLEGVVTKSRPVMIITEYMENGS-----LDK-----------------FLRENDGKFTVGQLVGMLRGIASG  118 (266)
T ss_pred             hCCCCCcceEeEEEecCCceEEEEEcCCCCC-----HHH-----------------HHHhccCCCCHHHHHHHHHHHHHH
Confidence            4556666666655444445566666655421     111                 2221 1234455666666777788


Q ss_pred             ceeeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               ++                       ++|. ....++. + |||||   
T Consensus       119 l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l  198 (266)
T cd05033         119 MKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM  198 (266)
T ss_pred             HHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHH
Confidence            88888888888875 33               11                       1111 2355788 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                                |.+.+..++...+..+.+++.|..+|..+.+|+.+||+.+|++||++.+|++.|+.+
T Consensus       199 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         199 WEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                      445666778888888888888889999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.66  E-value=9.7e-17  Score=122.04  Aligned_cols=172  Identities=21%  Similarity=0.271  Sum_probs=116.2

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++++++.+......++|+|+++.+. +.-.+... ......++.+      .......+...+++.+..+.+.++.
T Consensus        76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~-L~~~i~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~qi~~aL~  148 (314)
T cd05099          76 KHKNIINLLGVCTQEGPLYVIVEYAAKGN-LREFLRARRPPGPDYTFDI------TKVPEEQLSFKDLVSCAYQVARGME  148 (314)
T ss_pred             CCCCeeeEEEEEccCCceEEEEecCCCCc-HHHHHHhcCCCcccccccc------cCCcccccCHHHHHHHHHHHHHHHH
Confidence            47788887776665556788888877632 10000000 0000000000      0011123446667777788888999


Q ss_pred             eeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |+               ++++                       |. ..+.++. + |||||     
T Consensus       149 ~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~e  228 (314)
T cd05099         149 YLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWE  228 (314)
T ss_pred             HHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHH
Confidence            999999999886 44               2221                       11 2345788 9 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKE  185 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~  185 (189)
                              |.+.+..++...+..+.++..|..+|.++.+|+.+||..||++|||+.++++.|+.+......+|.+
T Consensus       229 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  303 (314)
T cd05099         229 IFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYLD  303 (314)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCcee
Confidence                    4455567777778788777888899999999999999999999999999999999998877666653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.65  E-value=6.8e-17  Score=121.41  Aligned_cols=167  Identities=14%  Similarity=0.190  Sum_probs=114.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC---CCCcCHhHHHHHhhhc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG---RTTIHYPELVEHYSKD   80 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~---~~~~~l~~li~~~~~~   80 (189)
                      ..+.|+|++++++.+...+..++|.|+..++. +.-.+..  .+....         ++..   ...+.......+..+.
T Consensus        62 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L~~~i~~--~~~~~~---------~~~~~~~~~~l~~~~~~~~~~ql  129 (288)
T cd05093          62 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD-LNKFLRA--HGPDAV---------LMAEGNRPAELTQSQMLHIAQQI  129 (288)
T ss_pred             HhCCCCCcceEEEEEecCCccEEEEEcCCCCC-HHHHHHH--cCCccc---------cccccCCCCCCCHHHHHHHHHHH
Confidence            35678888888887776777888888877632 2100000  000000         1111   1123455666677788


Q ss_pred             cCCceeeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG  118 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG  118 (189)
                      +.++.++|..+++|+|+ |.               ++                       ++|. ....++. + |||||
T Consensus       130 ~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG  209 (288)
T cd05093         130 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG  209 (288)
T ss_pred             HHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHH
Confidence            88888888888888885 43               11                       2221 3345788 9 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                                   |.+.+..++...+..+..++.|..+|.++.+|+.+||+.||.+|||+.++...|+.+.+. .+.|
T Consensus       210 ~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~-~~~~  286 (288)
T cd05093         210 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA-SPVY  286 (288)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh-cccc
Confidence                         444556777788888877777888999999999999999999999999999999998864 3444

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.65  E-value=8.2e-17  Score=118.87  Aligned_cols=147  Identities=17%  Similarity=0.258  Sum_probs=101.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+......++|+|+.+++. +    ..                 ++.. ...+....+..+..+.+.
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~-L----~~-----------------~~~~~~~~~~~~~~~~~~~~i~~  111 (256)
T cd05114          54 MKLSHPKLVQLYGVCTQQKPLYIVTEFMENGC-L----LN-----------------YLRQRQGKLSKDMLLSMCQDVCE  111 (256)
T ss_pred             HHCCCCCceeEEEEEccCCCEEEEEEcCCCCc-H----HH-----------------HHHhCccCCCHHHHHHHHHHHHH
Confidence            34667777777776666666777777776522 1    11                 1211 112334455566667777


Q ss_pred             CceeeccCCcccccc-cc---------------ccc----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLV----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      ++.++|..+++|+|+ |.               +++                      +|. ....++. + |||||   
T Consensus       112 ~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l  191 (256)
T cd05114         112 GMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM  191 (256)
T ss_pred             HHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHH
Confidence            788888888888775 33               111                      111 2345788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                                |.+.+..++...+.++.++..|...+.++.+|+.+||+.||++||++++|++.|
T Consensus       192 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         192 WEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence                      334455677788888888888888999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.65  E-value=5e-17  Score=122.03  Aligned_cols=166  Identities=19%  Similarity=0.218  Sum_probs=110.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC---ccCCCCCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET---QKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g---yl~~~~~~~l~~li~~~~~~a   81 (189)
                      .+.|+|++++++.+...+..++|+|+.+.+. +.-.+..  ...............   +......+...++..+..+.+
T Consensus        64 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~  140 (288)
T cd05050          64 EFDHPNIVKLLGVCAVGKPMCLLFEYMAYGD-LNEFLRH--RSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVA  140 (288)
T ss_pred             hcCCCchheEEEEEcCCCccEEEEecCCCCC-HHHHHHH--cCccccccccccccccccccccccccCHHHHHHHHHHHH
Confidence            5678999998888777778899999888732 2100110  000000000000000   111122334555667777788


Q ss_pred             CCceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG-  118 (189)
                      .++.++|...++|+|+ |.               +++                       +|. ....++. + ||||| 
T Consensus       141 ~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  220 (288)
T cd05050         141 AGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGV  220 (288)
T ss_pred             HHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHH
Confidence            8888888888888875 33               211                       111 3356788 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                  |.+.+..++...+..+..++.|..+|.++.+|+.+||+.+|++|||+.||++.|+
T Consensus       221 il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         221 VLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence                        3455667788888888777788899999999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0578|consensus

Probab=99.65  E-value=2e-16  Score=123.46  Aligned_cols=145  Identities=10%  Similarity=0.083  Sum_probs=108.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ....|+|+|.+|......+..|+|+|++.. |.++    +    .+.++              .+...++...+.....|
T Consensus       325 ~~~~H~NiVnfl~Sylv~deLWVVMEym~g-gsLT----D----vVt~~--------------~~~E~qIA~Icre~l~a  381 (550)
T KOG0578|consen  325 RDLHHPNIVNFLDSYLVGDELWVVMEYMEG-GSLT----D----VVTKT--------------RMTEGQIAAICREILQG  381 (550)
T ss_pred             HhccchHHHHHHHHhcccceeEEEEeecCC-Cchh----h----hhhcc--------------cccHHHHHHHHHHHHHH
Confidence            456899999999866666779999999998 5221    1    22222              12233344444556678


Q ss_pred             ceeeccCCcccccccc-------------------------------------cccccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSCRI-------------------------------------YLVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~p~-------------------------------------~l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      |.++|..+|+|||+..                                     |||+|+ ....|.. . |||+|     
T Consensus       382 L~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIE  461 (550)
T KOG0578|consen  382 LKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIE  461 (550)
T ss_pred             HHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHH
Confidence            8888888888887655                                     788777 4556999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHc-C-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEH-G-YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~-g-~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |-..++.+.+..+.. | ..+..|...++++++++.+|+..|+.+||+++|+++.
T Consensus       462 MveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  462 MVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence                   666677788888854 4 2345678899999999999999999999999999874

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.65  E-value=2.9e-15  Score=94.15  Aligned_cols=87  Identities=43%  Similarity=0.590  Sum_probs=74.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCC-CCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAG-RTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~-~~~~~-l~~li~~~   77 (189)
                      ||||.|++..|+++|..  ..+|+||||.+.+..+.|+||++.  .+.+.|++|....++ ++.. ...|. +.+|++++
T Consensus         2 w~~g~i~r~~Ae~~L~~--~~~G~FLiR~s~~~~~~~~Lsv~~--~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y   77 (94)
T cd00173           2 WYHGPISREEAEELLKK--KPDGTFLVRDSESSPGDYVLSVRV--KGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHY   77 (94)
T ss_pred             ccccCCCHHHHHHHHhc--CCCceEEEEecCCCCCCEEEEEEE--CCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHH
Confidence            99999999999999965  578999999999777999999999  899999999999888 4443 66788 99999999


Q ss_pred             hhcc--CCceeeccCC
Q psy1684          78 SKDA--DGLCVNLRKP   91 (189)
Q Consensus        78 ~~~a--~gl~~~~~~~   91 (189)
                      ....  .++...+..|
T Consensus        78 ~~~~~~~~~~~~L~~p   93 (94)
T cd00173          78 QKNPLSDGLGVKLRYP   93 (94)
T ss_pred             hhCccCCCcccEeCCc
Confidence            9887  5655555444

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.64  E-value=3.8e-17  Score=123.66  Aligned_cols=165  Identities=19%  Similarity=0.266  Sum_probs=106.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+...+..+||+|++.++....+ +..  . .. .........+  .......+....+..+..+.+
T Consensus        74 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~  148 (304)
T cd05096          74 SRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQF-LSS--H-HL-DDKEENGNDAVPPAHCLPAISYSSLLHVALQIA  148 (304)
T ss_pred             hhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHH-HHh--c-cc-cccccccccccccccccccccHHHHHHHHHHHH
Confidence            457899999988887777778999999876331110 000  0 00 0000000000  011112233566777788888


Q ss_pred             CCceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG-  118 (189)
                      .|+.++|..+++|+|+ |+               |++.                       |. ..+.++. + ||||| 
T Consensus       149 ~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  228 (304)
T cd05096         149 SGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGV  228 (304)
T ss_pred             HHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHH
Confidence            9999999999999986 44               3222                       11 2356788 9 99999 


Q ss_pred             -------------CCCCChHHHHHHHHc-------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -------------SGGMTNAEVLHQVEH-------GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~-------g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                   |.+.+..+++..+..       ...+..|+.||..+.+||.+||+.||++|||+.+|.+.|+
T Consensus       229 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         229 TLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence                         444555555544321       1123456789999999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.64  E-value=9.3e-17  Score=118.82  Aligned_cols=148  Identities=26%  Similarity=0.482  Sum_probs=100.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++........+||+|++.++.     +..                 ++..  ...+.+.....+..+.+.
T Consensus        57 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~~l~~  114 (261)
T cd05072          57 TLQHDKLVRLYAVVTKEEPIYIITEYMAKGS-----LLD-----------------FLKSDEGGKVLLPKLIDFSAQIAE  114 (261)
T ss_pred             hCCCCCeeeEEEEEcCCCCcEEEEecCCCCc-----HHH-----------------HHHHhcCCCCCHHHHHHHHHHHHH
Confidence            4556666666555544455566666665422     111                 2211  122335555666667777


Q ss_pred             CceeeccCCcccccc-cc---------------cc----------------------cccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL----------------------VHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |.               ++                      ++|. ..+.++. + |||||   
T Consensus       115 ~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  194 (261)
T cd05072         115 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL  194 (261)
T ss_pred             HHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHH
Confidence            888888888888775 43               11                      1111 3355788 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                                |.+.+..++...+..+.+.+.+..+|.++.+++.+||..||++||++++|.+.|++
T Consensus       195 ~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         195 YEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence                      44555677777888888777778899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.64  E-value=6.7e-17  Score=120.24  Aligned_cols=108  Identities=30%  Similarity=0.476  Sum_probs=85.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~  107 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               |++...                        ..
T Consensus       109 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  188 (272)
T cd05075         109 LPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD  188 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC
Confidence            335556667778888999999999999886 44               222110                        23


Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ..++. + |||||             |.+....++...+.++.+++.+..++..+.+++.+||+.||++|||+.+|++.|
T Consensus       189 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  268 (272)
T cd05075         189 RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL  268 (272)
T ss_pred             CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            44678 8 99999             455667778888888887778889999999999999999999999999999999


Q ss_pred             HHH
Q psy1684         173 EDF  175 (189)
Q Consensus       173 ~~~  175 (189)
                      +++
T Consensus       269 ~~~  271 (272)
T cd05075         269 EKA  271 (272)
T ss_pred             Hhh
Confidence            875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.64  E-value=1.2e-16  Score=118.78  Aligned_cols=150  Identities=20%  Similarity=0.288  Sum_probs=102.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+......++|+|+... +.+    ..                 ++.. ...+...++..+..+.+.
T Consensus        60 ~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~-~~L----~~-----------------~l~~~~~~~~~~~~~~i~~~l~~  117 (269)
T cd05065          60 GQFDHPNIIHLEGVVTKSRPVMIITEFMEN-GAL----DS-----------------FLRQNDGQFTVIQLVGMLRGIAA  117 (269)
T ss_pred             HhCCCcCcceEEEEECCCCceEEEEecCCC-CcH----HH-----------------HHhhCCCCCCHHHHHHHHHHHHH
Confidence            356788888877766666667888887765 311    11                 1111 122334555555566666


Q ss_pred             CceeeccCCcccccc-cc---------------c--------------------------ccccC-CCCCccc-e-EEEe
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y--------------------------LVHGT-NLSGVVV-S-AVDF  117 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~--------------------------l~~~~-~~~~~~~-s-Vwsf  117 (189)
                      ++.++|..+++|+|+ |.               +                          +++|. ....++. + ||||
T Consensus       118 al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dvwsl  197 (269)
T cd05065         118 GMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSY  197 (269)
T ss_pred             HHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhh
Confidence            777777777777664 32               1                          11111 2355788 8 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                      |             |.+.+..++...+..+.+.+.|..+|..+.+++.+||..+|++||++.+|+..|+.+
T Consensus       198 G~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         198 GIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            9             334456677777777777888889999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.64  E-value=5.5e-17  Score=126.34  Aligned_cols=109  Identities=26%  Similarity=0.461  Sum_probs=83.2

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccccc-----------------------C-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHG-----------------------T-NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~-----------------------~-~~  107 (189)
                      +....+..+..+++.|+.++|..+++|||+ |+               |++..                       . ..
T Consensus       209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  288 (374)
T cd05106         209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD  288 (374)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC
Confidence            335667778889999999999999999996 44               22221                       1 23


Q ss_pred             CCccc-e-EEEec-------------CCCCChH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNA-EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~-~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.++. + |||||             |++.... .+...+..+.++..|...|+++.+++.+||+.||++|||+.+|++.
T Consensus       289 ~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~  368 (374)
T cd05106         289 CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL  368 (374)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            45788 9 99999             3333332 3334456667777788889999999999999999999999999999


Q ss_pred             HHHHH
Q psy1684         172 LEDFF  176 (189)
Q Consensus       172 l~~~~  176 (189)
                      |+.++
T Consensus       369 l~~~~  373 (374)
T cd05106         369 IQRQL  373 (374)
T ss_pred             HHHHh
Confidence            98875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.64  E-value=7.1e-17  Score=119.32  Aligned_cols=148  Identities=19%  Similarity=0.258  Sum_probs=104.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+...+..++|+|+...+.     +..                 ++.. ...+....+..+..+.+.
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----l~~-----------------~i~~~~~~~~~~~~~~~~~~i~~  111 (256)
T cd05113          54 MKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGC-----LLN-----------------YLREHGKRFQPSQLLEMCKDVCE  111 (256)
T ss_pred             hcCCCCCeeeEEEEEccCCCcEEEEEcCCCCc-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            45678888888877766667788888766521     111                 1211 112345666777778888


Q ss_pred             CceeeccCCcccccc-cc---------------ccc----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLV----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |.               +++                      +|. ....++. + |||||   
T Consensus       112 ~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l  191 (256)
T cd05113         112 GMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM  191 (256)
T ss_pred             HHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHH
Confidence            888888888888875 33               111                      111 2345788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |...+..++...+..+.+.+.|...+..+++++.+||+.||++||++.+|++.|+
T Consensus       192 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         192 WEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence                      3334556677778888888788888999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.64  E-value=1.5e-15  Score=91.93  Aligned_cols=74  Identities=31%  Similarity=0.411  Sum_probs=67.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|++.+|+++|.. ..++|+||||.+.+.++.|+|+++.  .+.+.|++|.+..++  ++.....|. +.+|++||
T Consensus         1 W~~g~isr~~Ae~~L~~-~~~~G~FLvR~s~~~~~~~~Lsv~~--~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y   77 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQ-GKPDGTFLVRPSSSKPGKYVLSVRF--DGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY   77 (77)
T ss_dssp             TBEESSHHHHHHHHHHT-TSSTTEEEEEEESSSTTSEEEEEEE--TTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHh-cCCCCeEEEEecccccccccccccc--ccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence            99999999999999976 5689999999999888999999999  999999999999888  676667788 99999886

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG0661|consensus

Probab=99.64  E-value=5.3e-17  Score=124.58  Aligned_cols=146  Identities=13%  Similarity=0.097  Sum_probs=110.8

Q ss_pred             CCCC-hHHHHHHhcCCCCCC-CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhcc
Q psy1684           4 GKIK-RIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~-~~n~~~lL~~~~~~~-g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a   81 (189)
                      .+|+ |+|++++..+-.+.+ ..|+|+|+|.. +.|-| .++                    .+..|+..++.++..|+.
T Consensus        63 ~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqL-mK~--------------------R~r~fse~~irnim~Qil  120 (538)
T KOG0661|consen   63 RKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQL-MKD--------------------RNRLFSESDIRNIMYQIL  120 (538)
T ss_pred             HhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHH-Hhh--------------------cCCcCCHHHHHHHHHHHH
Confidence            4677 999999888776666 78999999987 53322 111                    134566788888999999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC----------------------CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT----------------------NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~----------------------~~~~~~~-s-VwsfG---  118 (189)
                      +||+++|..+..|||+ ||               |||++.                      +.+-||. . +||+|   
T Consensus       121 qGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~  200 (538)
T KOG0661|consen  121 QGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIM  200 (538)
T ss_pred             HHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHH
Confidence            9999999999999995 77               778877                      6778999 8 99999   


Q ss_pred             ---------CCCCChHHHHHHHHc--------------------CCCCCC-C--------CCCCHHHHHHHHHhcccCCC
Q psy1684         119 ---------SGGMTNAEVLHQVEH--------------------GYRMPC-P--------PGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~--------------------g~~~~~-p--------~~~p~~~~~l~~~C~~~~p~  160 (189)
                               |+|.+..+-+.+|..                    +.+.|. +        +.++.+..+||.+|+++||+
T Consensus       201 aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~  280 (538)
T KOG0661|consen  201 AELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPD  280 (538)
T ss_pred             HHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCc
Confidence                     888775443333311                    112221 1        24888999999999999999


Q ss_pred             CCCCHHHHHHH
Q psy1684         161 KRPTFETLQWK  171 (189)
Q Consensus       161 ~RP~~~~i~~~  171 (189)
                      +|||+++.++.
T Consensus       281 kRpTA~~al~~  291 (538)
T KOG0661|consen  281 KRPTASQALQH  291 (538)
T ss_pred             cCccHHHHhcC
Confidence            99999998864

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.63  E-value=1.2e-16  Score=119.05  Aligned_cols=162  Identities=21%  Similarity=0.298  Sum_probs=107.9

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCcc---CCCCCcCHhHHHHHhhhccCC
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQK---AGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl---~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .|+|++++++.+....-.++|+|+.+++....+....    ..     ......+.   .....+....+..+..+.+.+
T Consensus        54 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~----~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~a  124 (270)
T cd05047          54 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS----RV-----LETDPAFAIANSTASTLSSQQLLHFAADVARG  124 (270)
T ss_pred             cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhc----cc-----cccccccccccCCcCCCCHHHHHHHHHHHHHH
Confidence            5777777776665555567788877653211100000    00     00000000   011234466677777888889


Q ss_pred             ceeeccCCcccccc-cc---------------cccc--------------------cC-CCCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|+|+ |.               +++.                    |. ....++. + |||||      
T Consensus       125 l~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el  204 (270)
T cd05047         125 MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI  204 (270)
T ss_pred             HHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHH
Confidence            99999999999986 44               2221                    11 2345788 8 99999      


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                             |.+.+..++...+..+.+++.|..++.++.+|+.+||..||.+|||+.+++..|+.+++
T Consensus       205 ~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~  270 (270)
T cd05047         205 VSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  270 (270)
T ss_pred             HcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence                   44445566777777777788888899999999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.63  E-value=1.3e-16  Score=118.60  Aligned_cols=108  Identities=28%  Similarity=0.441  Sum_probs=86.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~  107 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               ++++                       +. ..
T Consensus       110 ~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05035         110 LPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD  189 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc
Confidence            345666667778888999999999999886 44               2221                       11 23


Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ..++. + |||||             |.+.+..++...+..+..++.|..++.++.+++.+||+.||++|||+.++++.|
T Consensus       190 ~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l  269 (273)
T cd05035         190 RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL  269 (273)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            45778 9 99999             556667788888888888888899999999999999999999999999999999


Q ss_pred             HHH
Q psy1684         173 EDF  175 (189)
Q Consensus       173 ~~~  175 (189)
                      +++
T Consensus       270 ~~~  272 (273)
T cd05035         270 ENI  272 (273)
T ss_pred             Hhh
Confidence            875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.63  E-value=2.9e-16  Score=120.47  Aligned_cols=161  Identities=23%  Similarity=0.308  Sum_probs=114.0

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--cc-----CCCCCcCHhHHHHHhhh
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QK-----AGRTTIHYPELVEHYSK   79 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl-----~~~~~~~l~~li~~~~~   79 (189)
                      .|+|++++.+.+......++|.|+.+++.     +...    +..    ....+  +.     .....+.+..++.+..+
T Consensus        76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~-----L~~~----l~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  142 (334)
T cd05100          76 KHKNIINLLGACTQDGPLYVLVEYASKGN-----LREY----LRA----RRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQ  142 (334)
T ss_pred             CCCCeeeeeEEEccCCceEEEEecCCCCc-----HHHH----HHh----cCCcccccccccccCccccCCHHHHHHHHHH
Confidence            58888888877766666788888877632     1110    000    00000  00     01123446667777888


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-Vwsf  117 (189)
                      .+.|+.++|..+++|+|+ |.               ++++                       |. ....++. + ||||
T Consensus       143 i~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  222 (334)
T cd05100         143 VARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF  222 (334)
T ss_pred             HHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHH
Confidence            889999999999999985 44               2221                       11 2345788 9 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                      |             |.+.+..++...+..+.+++.|..++.++.+|+.+||+.+|++||++.+|++.|+.+.....
T Consensus       223 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~  298 (334)
T cd05100         223 GVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS  298 (334)
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence            9             45556677777788888888888999999999999999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.63  E-value=1.6e-16  Score=118.80  Aligned_cols=116  Identities=23%  Similarity=0.374  Sum_probs=89.2

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c-----------------------ccccC-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y-----------------------LVHGT-NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~-----------------------l~~~~-~~  107 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |.               +                       +++|. ..
T Consensus       106 ~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05057         106 IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH  185 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc
Confidence            345566667777888888888888888875 33               1                       11221 23


Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ..++. + |||||             |.+.+..++...+..+...+.|..++.++.+++.+||..||++||++.++++.|
T Consensus       186 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l  265 (279)
T cd05057         186 RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEF  265 (279)
T ss_pred             CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence            56788 8 99999             455566778888888888888889999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCC
Q psy1684         173 EDFFTMEGSDYK  184 (189)
Q Consensus       173 ~~~~~~~~~~~~  184 (189)
                      +++.+ ..+.|.
T Consensus       266 ~~~~~-~~~~~~  276 (279)
T cd05057         266 SKMAR-DPQRYL  276 (279)
T ss_pred             HHHHh-CCcceE
Confidence            99876 444443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=1.4e-16  Score=117.87  Aligned_cols=107  Identities=49%  Similarity=0.891  Sum_probs=82.7

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc----------------------cccC-CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL----------------------VHGT-NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-~~~  108 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |.               ++                      ++|. ...
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05068         100 LKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYN  179 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccC
Confidence            445666666777778888888888888875 44               11                      1221 234


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      .++. + |||||             |.+.+..++...+..+.+++.|..+|..+.+++.+||+.+|++||++.+|.+.|+
T Consensus       180 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~  259 (261)
T cd05068         180 RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE  259 (261)
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence            5688 9 99999             4566677777788777777788899999999999999999999999999999997


Q ss_pred             H
Q psy1684         174 D  174 (189)
Q Consensus       174 ~  174 (189)
                      +
T Consensus       260 ~  260 (261)
T cd05068         260 D  260 (261)
T ss_pred             c
Confidence            5

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.62  E-value=5.6e-17  Score=121.13  Aligned_cols=145  Identities=13%  Similarity=0.088  Sum_probs=98.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||+|++++ |.+    ..                 ++.. ...++....+.+..+.+.
T Consensus        71 ~~l~h~niv~~~~~~~~~~~~~lv~ey~~~-g~L----~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  128 (274)
T cd05076          71 SQVSHIHLAFVHGVCVRGSENIMVEEFVEH-GPL----DV-----------------CLRKEKGRVPVAWKITVAQQLAS  128 (274)
T ss_pred             hcCCCCCeeeEEEEEEeCCceEEEEecCCC-CcH----HH-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            467899999999888777778899998887 321    11                 1111 223445556677778888


Q ss_pred             CceeeccCCcccccc-ccc---------------------------------------ccccC-C-CCCccc-e-EEEec
Q psy1684          83 GLCVNLRKPCVQVSC-RIY---------------------------------------LVHGT-N-LSGVVV-S-AVDFG  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~---------------------------------------l~~~~-~-~~~~~~-s-VwsfG  118 (189)
                      |+.++|..+++|+|+ |..                                       ++++. . ...++. + |||||
T Consensus       129 ~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG  208 (274)
T cd05076         129 ALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFG  208 (274)
T ss_pred             HHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHH
Confidence            889999988888885 431                                       11111 1 234788 8 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                                   |.+.+..+....+....  ..|...++++.++|.+||+.+|++||||++|++.|
T Consensus       209 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         209 TTLLEICFDGEVPLKERTPSEKERFYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHHHHHhCCCCCccccChHHHHHHHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence                         33333344433333333  33444567899999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=1.5e-16  Score=117.47  Aligned_cols=116  Identities=30%  Similarity=0.429  Sum_probs=87.1

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c------------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y------------------------  100 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~------------------------  100 (189)
                      ++.....++......+..+.+.++.++|..+++|+|+ |+               +                        
T Consensus        85 ~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y  164 (257)
T cd05060          85 YLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKW  164 (257)
T ss_pred             HHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccc
Confidence            4443334445566667777788888888888888885 44               1                        


Q ss_pred             ccccC-CCCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC
Q psy1684         101 LVHGT-NLSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT  164 (189)
Q Consensus       101 l~~~~-~~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~  164 (189)
                      +++|. ....++. + |||||             |...+..++...+..+.+++.|..+|..+++|+.+||..||++||+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~  244 (257)
T cd05060         165 YAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPT  244 (257)
T ss_pred             cCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            11111 2345788 9 99999             4455666777778788788889999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy1684         165 FETLQWKLEDFF  176 (189)
Q Consensus       165 ~~~i~~~l~~~~  176 (189)
                      +.+|++.|+.+.
T Consensus       245 ~~~l~~~l~~~~  256 (257)
T cd05060         245 FSELESTFRRDP  256 (257)
T ss_pred             HHHHHHHHHhcc
Confidence            999999997653

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.62  E-value=1e-16  Score=125.73  Aligned_cols=109  Identities=26%  Similarity=0.414  Sum_probs=83.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~  107 (189)
                      +.+..++.+..+.+.|+.++|..+++|+|+ |.               ++++..                        ..
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  315 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN  315 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC
Confidence            335667778888899999999999999986 44               222210                        22


Q ss_pred             CCccc-e-EEEec-------------CCCCChHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAE-VLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~-~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||             |......+ ....+..+.+++.|..++.++.+|+.+||..+|.+||+|++|++.
T Consensus       316 ~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         316 NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            34678 8 99999             33333333 334456788888888999999999999999999999999999999


Q ss_pred             HHHHH
Q psy1684         172 LEDFF  176 (189)
Q Consensus       172 l~~~~  176 (189)
                      |+.++
T Consensus       396 L~~~~  400 (401)
T cd05107         396 VGDLL  400 (401)
T ss_pred             HHHHh
Confidence            99876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.62  E-value=2.8e-16  Score=119.01  Aligned_cols=166  Identities=21%  Similarity=0.282  Sum_probs=110.3

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      +|+|++++++.+......++|+|+.+++....+............+.+      .......+....+..+..+.+.|+.+
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~qi~~al~~  139 (303)
T cd05088          66 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI------ANSTASTLSSQQLLHFAADVARGMDY  139 (303)
T ss_pred             CCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccc------cccccCcCCHHHHHHHHHHHHHHHHH
Confidence            688888888777666678888888776321110000000000000000      00112234466677778888889999


Q ss_pred             eccCCcccccc-cc---------------cccc--------------------cC-CCCCccc-e-EEEec---------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGVVV-S-AVDFG---------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~~~-s-VwsfG---------  118 (189)
                      +|..+++|+|+ |+               |+++                    |. ....++. + |||||         
T Consensus       140 LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  219 (303)
T cd05088         140 LSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  219 (303)
T ss_pred             HHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhc
Confidence            99999999986 44               2221                    11 2234678 8 99999         


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                          |.+.+..++...+..+.+++.|..++.++.+|+.+||+.+|++||++.+++..|+.++..
T Consensus       220 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         220 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             CCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                334455666666777777777888999999999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.62  E-value=1.7e-16  Score=120.27  Aligned_cols=167  Identities=21%  Similarity=0.311  Sum_probs=109.7

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      +|+|++++++.+...+..|+|+|+... +++.-.+..........+     .+........+....++.+..+.+.|+.+
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~i~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~qi~~aL~~  155 (307)
T cd05098          82 KHKNIINLLGACTQDGPLYVIVEYASK-GNLREYLRARRPPGMEYC-----YNPTQVPEEQLSFKDLVSCAYQVARGMEY  155 (307)
T ss_pred             CCCCEeeEEEEEecCCceEEEEecCCC-CcHHHHHHhcCCcccccc-----cccccCccccCCHHHHHHHHHHHHHHHHH
Confidence            577777777766666677888887765 322100000000000000     00000111223456677777788888888


Q ss_pred             eccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG------  118 (189)
                      +|..+++|+|+ |+               +++                       +|. ....++. + |||||      
T Consensus       156 lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el  235 (307)
T cd05098         156 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI  235 (307)
T ss_pred             HHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHH
Confidence            88888888875 43               111                       111 2345788 9 99999      


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                             |.+.+..++...+..+.+++.|..++.++.+|+.+||..+|++|||+.+|++.|+.++...
T Consensus       236 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~  303 (307)
T cd05098         236 FTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT  303 (307)
T ss_pred             HcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence                   3444556777777778778888899999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.62  E-value=2.2e-16  Score=118.04  Aligned_cols=159  Identities=19%  Similarity=0.272  Sum_probs=106.4

Q ss_pred             CCChHHHHHHhcCCCC-CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPEN-DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~-~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+.. ....+++.++.+. +.+.-.+..       +      ..+-......+....+..+..+.+.|
T Consensus        64 ~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~-~~L~~~l~~-------~------~~~~~~~~~~l~~~~~~~i~~~i~~~  129 (280)
T cd05043          64 GLSHQNILPILHVCIEDGEPPFVLYPYMNW-GNLKLFLQQ-------C------RLGEANNPQALSTQQLVHMAIQIACG  129 (280)
T ss_pred             hCCCCCCCeEEEEEecCCCCCEEEEEcCCC-CcHHHHHHh-------c------cccccccccCCCHHHHHHHHHHHHHH
Confidence            4678888887775443 3456677776664 321000000       0      00000001234455666677788888


Q ss_pred             ceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|...++|+|+ |.               ++++                       |. ....++. + |||||   
T Consensus       130 l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l  209 (280)
T cd05043         130 MSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLL  209 (280)
T ss_pred             HHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence            88898888888875 43               2221                       11 2345788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                |.+.++.++...+..+.+++.+..+|+++.+++.+||..||++|||+.+++..|+.+.+
T Consensus       210 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         210 WELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                      33455667777777888887888899999999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=1.5e-16  Score=117.43  Aligned_cols=149  Identities=23%  Similarity=0.373  Sum_probs=104.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC--CcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT--TIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~--~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+...+..++|+|++.++.     +..                 ++....  .+....+..+..+.+.
T Consensus        56 ~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~qi~~  113 (256)
T cd05039          56 TLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS-----LVD-----------------YLRSRGRAVITLAQQLGFALDVCE  113 (256)
T ss_pred             hcCCcceeeeEEEEcCCCCeEEEEEecCCCc-----HHH-----------------HHHhcCCCCCCHHHHHHHHHHHHH
Confidence            4567777777766655666777777666421     111                 222111  2335666666677788


Q ss_pred             CceeeccCCcccccc-cc---------------c------------------ccccC-CCCCccc-e-EEEec-------
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y------------------LVHGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~------------------l~~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      ++.++|..+++|+|+ |.               +                  +++|. ..+.++. + |||||       
T Consensus       114 ~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~  193 (256)
T cd05039         114 GMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  193 (256)
T ss_pred             HHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHH
Confidence            888888888888875 44               1                  11221 3456788 9 99999       


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                            |...+..++...+..+.++..|..+|+++.+++.+||..+|++||++.++++.|+++
T Consensus       194 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         194 SFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             hcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence                  334555677777777777778888999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.62  E-value=1.7e-16  Score=117.91  Aligned_cols=149  Identities=20%  Similarity=0.298  Sum_probs=100.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .+.|+|++++.+.+...+..+||+|+.++ +.    +..                 ++... ..+...++..+..+.+.+
T Consensus        61 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~~~~~~~~~~~~~~~~i~~~i~~~  118 (267)
T cd05066          61 QFDHPNIIHLEGVVTKSKPVMIVTEYMEN-GS----LDA-----------------FLRKHDGQFTVIQLVGMLRGIASG  118 (267)
T ss_pred             hCCCCCcceEEEEEecCCccEEEEEcCCC-CC----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            35677777776665555566777776665 21    111                 22111 123345555566666677


Q ss_pred             ceeeccCCcccccc-cc---------------c------------------------ccccC-CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------Y------------------------LVHGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~------------------------l~~~~-~~~~~~~-s-VwsfG--  118 (189)
                      +.++|..+++|+|+ |.               +                        +++|. ..+.++. + |||||  
T Consensus       119 l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~  198 (267)
T cd05066         119 MKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV  198 (267)
T ss_pred             HHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence            77777777777764 33               1                        11111 2356788 8 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                                 |.+.+..+....+.++.+++.+..+|+.+.+++.+||+.+|.+||+|.+|++.|+.+
T Consensus       199 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         199 MWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence                       334445667777788888888889999999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.62  E-value=1.4e-16  Score=118.37  Aligned_cols=149  Identities=21%  Similarity=0.306  Sum_probs=99.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++.+.+...+..+||+|+..+ +.    +..                 ++.. ...+....+..+..+.+.+
T Consensus        62 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~~~~~~~~~~~~~~~~~~~~l~~a  119 (268)
T cd05063          62 QFSHHNIIRLEGVVTKFKPAMIITEYMEN-GA----LDK-----------------YLRDHDGEFSSYQLVGMLRGIAAG  119 (268)
T ss_pred             cCCCCCeeEEEEEEccCCCcEEEEEcCCC-CC----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            45566666666655555556666666554 21    111                 2211 1223344555566666677


Q ss_pred             ceeeccCCcccccc-cc---------------c------------------------ccccC-CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------Y------------------------LVHGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~------------------------l~~~~-~~~~~~~-s-VwsfG--  118 (189)
                      +.++|..+++|+|+ |+               +                        +++|. ..+.++. + |||||  
T Consensus       120 l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~i  199 (268)
T cd05063         120 MKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV  199 (268)
T ss_pred             HHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHH
Confidence            77777777777764 33               1                        11221 2345788 8 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                                 |...+..++...+..+.+.+.+..+|.++.+++.+||+.+|++||++.+|++.|+.+
T Consensus       200 l~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         200 MWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                       334455677777777777788888999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.62  E-value=7.1e-17  Score=126.62  Aligned_cols=108  Identities=27%  Similarity=0.433  Sum_probs=83.4

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCC
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSG  109 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~  109 (189)
                      ..+++.+..+.+.|+.++|...++|+|+ |.               |++                       +|. ....
T Consensus       236 ~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  315 (400)
T cd05105         236 TLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL  315 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCC
Confidence            4556667788889999999999999986 43               222                       111 2345


Q ss_pred             ccc-e-EEEec-------------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         110 VVV-S-AVDFG-------------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       110 ~~~-s-VwsfG-------------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      ++. + |||||             |++... ..+...+..+.+++.|..+|.++.++|.+||+.||++||+|.+|.+.|+
T Consensus       316 ~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~  395 (400)
T cd05105         316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE  395 (400)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence            788 9 99999             233322 3445566778888888899999999999999999999999999999999


Q ss_pred             HHHh
Q psy1684         174 DFFT  177 (189)
Q Consensus       174 ~~~~  177 (189)
                      +++.
T Consensus       396 ~l~~  399 (400)
T cd05105         396 SLLP  399 (400)
T ss_pred             HHcC
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.62  E-value=1.8e-16  Score=118.55  Aligned_cols=113  Identities=24%  Similarity=0.363  Sum_probs=89.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~  106 (189)
                      .++....+.+..+.+.|+.++|..+++|+|+ |+               |+++                       |. .
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05109         105 RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL  184 (279)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhc
Confidence            4556777778888999999999999999986 44               2221                       11 3


Q ss_pred             CCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       107 ~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ...++. + |||||             |.+....++...+..+.+++.|..++.++.+++.+||..||++||++.++++.
T Consensus       185 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         185 HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            455788 9 99999             33445566767777788888888999999999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy1684         172 LEDFFTME  179 (189)
Q Consensus       172 l~~~~~~~  179 (189)
                      |+.+.+.+
T Consensus       265 l~~~~~~~  272 (279)
T cd05109         265 FSRMARDP  272 (279)
T ss_pred             HHHhhcCC
Confidence            98886644

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.62  E-value=2.3e-16  Score=116.18  Aligned_cols=148  Identities=20%  Similarity=0.389  Sum_probs=101.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||.|+..++.     +..                 ++... ..+.......+..+.+.
T Consensus        48 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~qi~~  105 (252)
T cd05084          48 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD-----FLT-----------------FLRTEGPRLKVKELIQMVENAAA  105 (252)
T ss_pred             HhCCCCCcceEEEEEcCCCCeEEEEeeccCCc-----HHH-----------------HHHhCCCCCCHHHHHHHHHHHHH
Confidence            35678888887777766666778887766522     111                 12111 12334555556666777


Q ss_pred             CceeeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec--
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG--  118 (189)
                      |+.++|..+++|+|+ |.               ++                       ++|. ..+.++. + |||||  
T Consensus       106 ~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  185 (252)
T cd05084         106 GMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL  185 (252)
T ss_pred             HHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHH
Confidence            777777777777764 33               11                       1221 3345788 8 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                 |...+..+....+..+.+++.|..+|.++.+|+.+||+.||++|||+.++.+.|+
T Consensus       186 l~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         186 LWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence                       3344556666777777777888899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.62  E-value=1.3e-16  Score=119.24  Aligned_cols=154  Identities=19%  Similarity=0.271  Sum_probs=102.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......++|+|++.++.     +...    +..     ... .......+.+.+.+.+..+.+.|+
T Consensus        65 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~-----L~~~----i~~-----~~~-~~~~~~~~~~~~~~~~~~qi~~~l  129 (277)
T cd05036          65 KFNHQNIVRLIGVSFERLPRFILLELMAGGD-----LKSF----LRE-----NRP-RPERPSSLTMKDLLFCARDVAKGC  129 (277)
T ss_pred             hCCCCCEeeEEEEEccCCCcEEEEecCCCCC-----HHHH----HHH-----hCC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            4567777777765555556677777666522     1110    000     000 000011244666777777888888


Q ss_pred             eeeccCCcccccc-cc------------------cccc-----------------------cC-CCCCccc-e-EEEec-
Q psy1684          85 CVNLRKPCVQVSC-RI------------------YLVH-----------------------GT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~------------------~l~~-----------------------~~-~~~~~~~-s-VwsfG-  118 (189)
                      .++|...++|+|+ |+                  |+++                       |. ....++. + ||||| 
T Consensus       130 ~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~  209 (277)
T cd05036         130 KYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV  209 (277)
T ss_pred             HHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHH
Confidence            8888888888875 43                  1111                       11 2355888 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                  |.+.+..++...+..+.+++.|..+|.++.+++.+||+.||++|||+.+|++.|+
T Consensus       210 il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         210 LLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence                        4555666777777777777788899999999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.62  E-value=1.8e-16  Score=118.77  Aligned_cols=166  Identities=17%  Similarity=0.297  Sum_probs=109.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.....+..++|+|+...+....+....    . .+..........-.....+...+++....+.+.+
T Consensus        62 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a  136 (283)
T cd05090          62 AELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMR----S-PHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG  136 (283)
T ss_pred             hhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhc----C-CCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            4677889888888766667788999988763211000000    0 0000000000000001223355566677778888


Q ss_pred             ceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               +++.                       |. ..+.++. + |||||   
T Consensus       137 l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il  216 (283)
T cd05090         137 MEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL  216 (283)
T ss_pred             HHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHH
Confidence            99999999999986 44               2221                       11 2345788 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                                |.+.+..++...+..+..++.|..+|.++.+++.+||+.||++||++.+|.+.|..
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         217 WEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                      33455667888888887788889999999999999999999999999999988853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0575|consensus

Probab=99.62  E-value=8.8e-17  Score=126.44  Aligned_cols=146  Identities=14%  Similarity=0.168  Sum_probs=107.8

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      |..|+|+|+|++.++....+..|||.|.+.++.     +..                 ++...+.+.-.+..-|..|+..
T Consensus        72 Hr~L~HpnIV~f~~~FEDs~nVYivLELC~~~s-----L~e-----------------l~Krrk~ltEpEary~l~QIv~  129 (592)
T KOG0575|consen   72 HRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGS-----LME-----------------LLKRRKPLTEPEARYFLRQIVE  129 (592)
T ss_pred             HHhcCCCcEEeeeeEeecCCceEEEEEecCCcc-----HHH-----------------HHHhcCCCCcHHHHHHHHHHHH
Confidence            788999999999999988899999999998832     211                 1221233444455556666667


Q ss_pred             CceeeccCCcccccccc-------------------------------------cccccC-CCCCccc-e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSCRI-------------------------------------YLVHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~-------------------------------------~l~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      |+.|+|...|+|||+.=                                     .+|+|+ .....+. + |||.|    
T Consensus       130 GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmY  209 (592)
T KOG0575|consen  130 GLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMY  209 (592)
T ss_pred             HHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHH
Confidence            77777777777776543                                     444444 3445788 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |+.-+..+.+.+|+... -.+|.....+..+||.+.++.||++|||..+|+..
T Consensus       210 tLL~G~PPFetk~vkety~~Ik~~~-Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  210 TLLVGRPPFETKTVKETYNKIKLNE-YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             hhhhCCCCcccchHHHHHHHHHhcC-cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                    66666778888886542 34577999999999999999999999999999864

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.61  E-value=2.6e-16  Score=118.24  Aligned_cols=169  Identities=21%  Similarity=0.269  Sum_probs=113.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+......++|+|+++++. +.-.+..  ....    ..     ............+..+..+.+.|
T Consensus        64 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~-L~~~l~~--~~~~----~~-----~~~~~~~~~~~~~~~~~~~l~~~  131 (288)
T cd05061          64 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD-LKSYLRS--LRPE----AE-----NNPGRPPPTLQEMIQMAAEIADG  131 (288)
T ss_pred             HhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCC-HHHHHHH--hccc----cc-----cCCCCCCCCHHHHHHHHHHHHHH
Confidence            35678888888876666667788888877632 2100100  0000    00     00001122255666677778888


Q ss_pred             ceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |+               ++++                       |. ..+.++. + |||||   
T Consensus       132 l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l  211 (288)
T cd05061         132 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL  211 (288)
T ss_pred             HHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence            88888888888885 44               2221                       11 2355788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCC
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEAS  187 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~~  187 (189)
                                |.+.+..++...+..+..++.|..+|+++.+++.+||+.||++|||+.++++.|...+.   |-|.+++
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~---~~~~~~~  287 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH---PSFPEVS  287 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC---CCCCCCC
Confidence                      44556677777777777777788999999999999999999999999999998877654   6666554

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.61  E-value=6.2e-16  Score=115.04  Aligned_cols=151  Identities=23%  Similarity=0.429  Sum_probs=105.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+. .+..++|.|+.+. ++    +..                 ++.. ...+....+..+..+.+.
T Consensus        62 ~~~~h~~i~~~~~~~~-~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~~~~~~l~~  118 (270)
T cd05056          62 RQFDHPHIVKLIGVIT-ENPVWIVMELAPL-GE----LRS-----------------YLQVNKYSLDLASLILYSYQLST  118 (270)
T ss_pred             HhCCCCchhceeEEEc-CCCcEEEEEcCCC-Cc----HHH-----------------HHHhCCCCCCHHHHHHHHHHHHH
Confidence            3567888888877654 3456777777665 31    211                 2221 112334555555666677


Q ss_pred             CceeeccCCcccccc-cc-------------------------------------cccccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI-------------------------------------YLVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~-------------------------------------~l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |.                                     ++++|. ....++. + |||||   
T Consensus       119 ~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  198 (270)
T cd05056         119 ALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM  198 (270)
T ss_pred             HHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHH
Confidence            777777777777764 33                                     112222 2345788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                |.+.+..+....+..+.+++.|..+|.++.++|.+||..+|++|||+.+++..|+.+..
T Consensus       199 ~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         199 WEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                      44555667777788888888899999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.61  E-value=4e-16  Score=115.01  Aligned_cols=148  Identities=26%  Similarity=0.413  Sum_probs=109.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC---------CCCcCHhHHH
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG---------RTTIHYPELV   74 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~---------~~~~~l~~li   74 (189)
                      ..++|+|++++++.+......+||+|+.+.+.     +..                 ++..         ...++..++.
T Consensus        51 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~~~~  108 (262)
T cd00192          51 KKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGD-----LLD-----------------YLRKSRPVFPSPEKSTLSLKDLL  108 (262)
T ss_pred             hhcCCCChheeeeeecCCCceEEEEEeccCCc-----HHH-----------------HHhhccccccccccccCCHHHHH
Confidence            34667888887777666666788888776522     111                 1111         1334466777


Q ss_pred             HHhhhccCCceeeccCCcccccc-cc---------------c-----------------------ccccC-CCCCccc-e
Q psy1684          75 EHYSKDADGLCVNLRKPCVQVSC-RI---------------Y-----------------------LVHGT-NLSGVVV-S  113 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~-----------------------l~~~~-~~~~~~~-s  113 (189)
                      .+..+.+.++.++|..+++|+|+ |.               +                       +++|. ....++. +
T Consensus       109 ~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (262)
T cd00192         109 SFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS  188 (262)
T ss_pred             HHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhh
Confidence            77788888999999999999986 43               1                       11111 2346788 9


Q ss_pred             -EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         114 -AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       114 -VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                       |||+|             |.+.+..++...+..+.+++.|..+|.++.+++.+||..||++|||+.++++.|+
T Consensus       189 Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence             99999             5566677888888888888899999999999999999999999999999998773

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.60  E-value=4.4e-16  Score=114.96  Aligned_cols=107  Identities=27%  Similarity=0.446  Sum_probs=83.4

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc------------------cC-CCCCccc-
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH------------------GT-NLSGVVV-  112 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~------------------~~-~~~~~~~-  112 (189)
                      ....+..+..+.+.|+.++|..+++|+|+ |.               ++++                  |. ....++. 
T Consensus       100 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  179 (256)
T cd05082         100 GGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK  179 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCch
Confidence            35666777778888999999999999986 44               2111                  11 3345788 


Q ss_pred             e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         113 S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       113 s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                      + |||||             |...+..++...+..+..+..+..+|+.+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       180 ~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         180 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            9 99999             334455677777777877778889999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.60  E-value=3.5e-16  Score=116.83  Aligned_cols=161  Identities=17%  Similarity=0.239  Sum_probs=106.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++.+.+......++|+|++.+ +.+.-.+..  .+.........     ......+....+..+..+.+.|+
T Consensus        64 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~i~~--~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~i~~~l  135 (280)
T cd05049          64 NFQHENIVKFYGVCTEGDPPIMVFEYMEH-GDLNKFLRS--HGPDAAFLKSP-----DSPMGELTLSQLLQIAVQIASGM  135 (280)
T ss_pred             hcCCCCchheeeEEecCCCeEEEEecCCC-CCHHHHHHh--cCCchhhhccc-----ccccccccHHHHHHHHHHHHHHH
Confidence            56788888888877666778888888876 322111111  00000000000     00112233555566667777788


Q ss_pred             eeeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |.               ++                       |+|. ..+.++. + |||||    
T Consensus       136 ~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  215 (280)
T cd05049         136 VYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW  215 (280)
T ss_pred             HHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence            8888888888774 33               11                       2221 3456788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                               |.+.+..++...+..|...+.|..+|.++.+++.+||+.||++||++.||++.|+
T Consensus       216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         216 EIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence                     3455567777777888777777889999999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>smart00252 SH2 Src homology 2 domains

Probab=99.60  E-value=1.3e-14  Score=89.23  Aligned_cols=77  Identities=42%  Similarity=0.495  Sum_probs=67.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|++.+|+++|..+  ++|+||||.+....+.|+||++.  .+.++|+.|....+|  ++.+...|. +.+||+++
T Consensus         3 w~~g~i~r~~Ae~lL~~~--~~G~FLvR~s~~~~~~~~Lsv~~--~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y   78 (84)
T smart00252        3 WYHGFISREEAEKLLKNE--GDGDFLVRDSESEPGDYVLSVRV--KGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHY   78 (84)
T ss_pred             eecccCCHHHHHHHHhcC--CCcEEEEEcCCCCCCCEEEEEEE--CCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHH
Confidence            999999999999999654  48999999999877999999999  899999999988855  676667888 99999999


Q ss_pred             hhcc
Q psy1684          78 SKDA   81 (189)
Q Consensus        78 ~~~a   81 (189)
                      ....
T Consensus        79 ~~~~   82 (84)
T smart00252       79 QKNS   82 (84)
T ss_pred             hhCC
Confidence            8654

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.60  E-value=2.8e-16  Score=116.04  Aligned_cols=105  Identities=26%  Similarity=0.407  Sum_probs=80.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccC-CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGT-NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~-~~~  108 (189)
                      +..........+.+.|+.++|..+++|+|+ |+               +++                      +|. ...
T Consensus        97 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  176 (256)
T cd05059          97 LGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYS  176 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccC
Confidence            335556666677778888888888888875 33               111                      111 235


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      .++. + |||||             |.+.+..+....+..+.+++.|..+|.++.+|+.+||..+|++|||+.++++.|
T Consensus       177 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         177 RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            6788 9 99999             334556777778888888888889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.59  E-value=3.8e-16  Score=118.22  Aligned_cols=151  Identities=19%  Similarity=0.258  Sum_probs=103.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+.. ...++|.++.+.+.     +..                 ++... ..+....+..+..+.+.|
T Consensus        65 ~l~h~niv~~~~~~~~-~~~~~v~e~~~~g~-----l~~-----------------~~~~~~~~~~~~~~~~~~~qi~~~  121 (303)
T cd05110          65 SMDHPHLVRLLGVCLS-PTIQLVTQLMPHGC-----LLD-----------------YVHEHKDNIGSQLLLNWCVQIAKG  121 (303)
T ss_pred             hCCCCCcccEEEEEcC-CCceeeehhcCCCC-----HHH-----------------HHHhcccCCCHHHHHHHHHHHHHH
Confidence            4567777777765543 23455666655422     111                 22211 123345556667777888


Q ss_pred             ceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               |++.                       +. ....++. + |||||   
T Consensus       122 L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l  201 (303)
T cd05110         122 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI  201 (303)
T ss_pred             HHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHH
Confidence            88888888888875 44               2111                       11 2355788 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                |.+....++...+..+.+++.|..++..+.+++.+||..+|++||+++++++.|+.+.+.
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         202 WELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                      344555666666777888888888999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.59  E-value=4e-16  Score=116.34  Aligned_cols=156  Identities=21%  Similarity=0.297  Sum_probs=105.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......++|+|+.+. +.+.-.+..  .          .... .......+....+..+..+.+.|
T Consensus        65 ~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~~L~~~l~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~  131 (277)
T cd05032          65 EFNCHHVVRLLGVVSTGQPTLVVMELMAK-GDLKSYLRS--R----------RPEAENNPGLGPPTLQKFIQMAAEIADG  131 (277)
T ss_pred             hCCCCceeEEEEEEcCCCCcEEEEecCCC-CCHHHHHHh--c----------ccchhhccCCCCCCHHHHHHHHHHHHHH
Confidence            45677788777766666667888887765 321000000  0          0000 00011123355566667777888


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               +++                       +|. ..+.++. + |||||   
T Consensus       132 l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  211 (277)
T cd05032         132 MAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL  211 (277)
T ss_pred             HHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence            88888888888875 33               211                       111 3355788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |.+.+..++...+..+..++.|..+|.++.+++.+||+.+|++|||+.+|+..|+
T Consensus       212 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         212 WEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence                      4455667777777777778888999999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0588|consensus

Probab=99.59  E-value=7.1e-16  Score=122.66  Aligned_cols=146  Identities=13%  Similarity=0.060  Sum_probs=117.1

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +.-|.|+|+++|+.+-.+....|||.|++++|..|.                      |+..++.+.-.+.+.|+.|+..
T Consensus        66 MkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFd----------------------ylv~kG~l~e~eaa~ff~QIi~  123 (786)
T KOG0588|consen   66 MKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFD----------------------YLVRKGPLPEREAAHFFRQILD  123 (786)
T ss_pred             HHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHH----------------------HHHhhCCCCCHHHHHHHHHHHH
Confidence            345778888888887777777888888888754221                      4444556666788889999999


Q ss_pred             CceeeccCCcccccc-cc---------------cccc--------------------cC-CCCCccc--e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGVVV--S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~~~--s-VwsfG----  118 (189)
                      |+.|+|...+.|||+ |+               |||-                    |. .+.+|.-  + |||.|    
T Consensus       124 gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILf  203 (786)
T KOG0588|consen  124 GVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILF  203 (786)
T ss_pred             HHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHH
Confidence            999999999999995 77               2221                    11 6777886  7 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+-+...++.+|.+|. ..+|...|.+.++|+.+++..||+.|-|++||++.
T Consensus       204 ALLtG~LPFdDdNir~LLlKV~~G~-f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  204 ALLTGKLPFDDDNIRVLLLKVQRGV-FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHhCCCCCCCccHHHHHHHHHcCc-ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence                    88888889999999995 55679999999999999999999999999999885

>KOG0198|consensus

Probab=99.59  E-value=7.1e-16  Score=115.69  Aligned_cols=146  Identities=16%  Similarity=0.141  Sum_probs=95.9

Q ss_pred             CCChHHHHHHhcCCCCCC--CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPENDH--GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~--g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a   81 (189)
                      +++|+|+|+.+|.-...+  -.+|++|+.+.+.     +..                 ++.... .++...+..|.+++.
T Consensus        70 ~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~Gs-----L~~-----------------~~~~~g~~l~E~~v~~ytr~iL  127 (313)
T KOG0198|consen   70 RLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGS-----LSD-----------------LIKRYGGKLPEPLVRRYTRQIL  127 (313)
T ss_pred             hCCCCCEEeeCCccccccCeeeEeeeeccCCCc-----HHH-----------------HHHHcCCCCCHHHHHHHHHHHH
Confidence            455777777776533333  2566666666532     222                 222222 455555667778888


Q ss_pred             CCceeeccCCccccccc-c----------------------------------------cccccCCC-CCcc-c-e-EEE
Q psy1684          82 DGLCVNLRKPCVQVSCR-I----------------------------------------YLVHGTNL-SGVV-V-S-AVD  116 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p-~----------------------------------------~l~~~~~~-~~~~-~-s-Vws  116 (189)
                      .|+.|+|+++++|+|+. +                                        |+|||.-. +... . + |||
T Consensus       128 ~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWS  207 (313)
T KOG0198|consen  128 EGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWS  207 (313)
T ss_pred             HHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhh
Confidence            88888888888888853 3                                        33333322 4334 4 7 999


Q ss_pred             ec------CCCC-------ChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         117 FG------SGGM-------TNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       117 fG------~~~~-------~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      +|      +.+.       ...+.+..+ .++..|++|..++.+..+++..|+..||++|||+++++...
T Consensus       208 lGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  208 LGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             cCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            99      4432       222333333 45556788999999999999999999999999999998764

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.59  E-value=3.2e-16  Score=117.30  Aligned_cols=163  Identities=14%  Similarity=0.199  Sum_probs=104.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..++|+|+..++....+ +..  .....+.    ...+-......+....+..+..+.+.+
T Consensus        62 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~-i~~--~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~qi~~a  134 (280)
T cd05092          62 TVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRF-LRS--HGPDAKI----LAGGEDVAPGQLTLGQMLAIASQIASG  134 (280)
T ss_pred             hcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHH-HHh--cCcchhh----hcccccCCccccCHHHHHHHHHHHHHH
Confidence            356788888887776666677888888776321111 111  0000000    000000001123345556666677778


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |+               +++                       +|. ....++. + |||||   
T Consensus       135 l~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  214 (280)
T cd05092         135 MVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL  214 (280)
T ss_pred             HHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence            88888888888875 33               221                       221 3355788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |.+.+..+....+..+..++.|..+|+++.+|+.+||+.||.+||++.+|.+.|+
T Consensus       215 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         215 WEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence                      3344556667777777777788899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG1187|consensus

Probab=99.58  E-value=2.6e-16  Score=121.40  Aligned_cols=153  Identities=17%  Similarity=0.241  Sum_probs=100.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCC-cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC--CcCHhHHHHHhhh
Q psy1684           3 FGKIKRIEAEKKLLLPENDHG-AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT--TIHYPELVEHYSK   79 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g-~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~--~~~l~~li~~~~~   79 (189)
                      .+.++|+|+++|+|+|....+ .+||.|++++ |    ++.+                 .|++..  ..++...+..+..
T Consensus       125 ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~n-G----sL~d-----------------~L~~~~~~~L~W~~R~kIa~g  182 (361)
T KOG1187|consen  125 LSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPN-G----SLED-----------------HLHGKKGEPLDWETRLKIALG  182 (361)
T ss_pred             HhcCCCcCcccEEEEEecCCceEEEEEEccCC-C----CHHH-----------------HhCCCCCCCCCHHHHHHHHHH
Confidence            467899999999999988775 8999999999 4    2333                 122221  3347778888888


Q ss_pred             ccCCceeeccC---Ccccccccc----------------cccc---c---------C-----------CCCCccc-e-EE
Q psy1684          80 DADGLCVNLRK---PCVQVSCRI----------------YLVH---G---------T-----------NLSGVVV-S-AV  115 (189)
Q Consensus        80 ~a~gl~~~~~~---~~~~~~~p~----------------~l~~---~---------~-----------~~~~~~~-s-Vw  115 (189)
                      +|.|+.|+|..   +++|||+..                |||+   +         .           ..+..|. + ||
T Consensus       183 ~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVy  262 (361)
T KOG1187|consen  183 AARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVY  262 (361)
T ss_pred             HHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccc
Confidence            88899999884   488988644                3322   1         1           3456788 9 99


Q ss_pred             Eec---------CCCCC------hHHHH----HHHHcCCCCC-----CC-CCCC-----HHHHHHHHHhcccCCCCCCCH
Q psy1684         116 DFG---------SGGMT------NAEVL----HQVEHGYRMP-----CP-PGCP-----PRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       116 sfG---------~~~~~------~~~~~----~~v~~g~~~~-----~p-~~~p-----~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      |||         -+.++      ...+.    ..+.++....     .. ...+     ..+..+..+|.+.+|.+||+|
T Consensus       263 SFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m  342 (361)
T KOG1187|consen  263 SFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTM  342 (361)
T ss_pred             cchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCH
Confidence            999         01111      11111    2233332111     11 1222     235577789999999999999


Q ss_pred             HHHHHHHHHHHh
Q psy1684         166 ETLQWKLEDFFT  177 (189)
Q Consensus       166 ~~i~~~l~~~~~  177 (189)
                      .+|++.|+.+..
T Consensus       343 ~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  343 SQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHhhcc
Confidence            999999976654

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.58  E-value=2.8e-16  Score=116.63  Aligned_cols=146  Identities=14%  Similarity=0.096  Sum_probs=92.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+......++|.|++..+. +.    .                 ++.. ...+....+..+..+.+.
T Consensus        59 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-l~----~-----------------~~~~~~~~~~~~~~~~i~~qi~~  116 (262)
T cd05077          59 RQVSHKHIVLLYGVCVRDVENIMVEEFVEFGP-LD----L-----------------FMHRKSDVLTTPWKFKVAKQLAS  116 (262)
T ss_pred             HhCCCCCEeeEEEEEecCCCCEEEEecccCCC-HH----H-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            35678888888877666666778888776522 11    0                 1211 123445556667778888


Q ss_pred             CceeeccCCcccccc-cc---------------------------------------cccccC-C-CCCccc-e-EEEec
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------------------------------YLVHGT-N-LSGVVV-S-AVDFG  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------------------------------~l~~~~-~-~~~~~~-s-VwsfG  118 (189)
                      |+.++|..+++|+|+ |.                                       ++++|. . ...++. + |||||
T Consensus       117 ~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  196 (262)
T cd05077         117 ALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFG  196 (262)
T ss_pred             HHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHH
Confidence            888888888888875 43                                       112221 1 345788 9 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                   +.+....+... ...+. ...+...+.++.+||.+||+.||.+||+|++|++.|+
T Consensus       197 ~~l~el~~~~~~p~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         197 TTLWEICYNGEIPLKDKTLAEKER-FYEGQ-CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHHhCCCCCCCCcchhHHHH-HHhcC-ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence                         22222222222 22222 2223345689999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.58  E-value=1.4e-15  Score=117.11  Aligned_cols=111  Identities=25%  Similarity=0.446  Sum_probs=86.2

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~  107 (189)
                      +.+..++.+..+.+.|+.++|..+++|+|+ |.               +++.                       |. ..
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  255 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  255 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC
Confidence            346667778889999999999999999996 44               2221                       11 23


Q ss_pred             CCccc-e-EEEec-------------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||             |++.. ..++...+..+.+++.|..+++++.+++.+||+.||++|||+.+|++.
T Consensus       256 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         256 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            45788 9 99999             33322 234555567788888888889999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy1684         172 LEDFFTM  178 (189)
Q Consensus       172 l~~~~~~  178 (189)
                      |+.+++.
T Consensus       336 l~~~~~~  342 (343)
T cd05103         336 LGNLLQA  342 (343)
T ss_pred             HHHHHhc
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.58  E-value=5.3e-16  Score=115.87  Aligned_cols=157  Identities=18%  Similarity=0.256  Sum_probs=103.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......++|+|+.+.+. +.-.+..  .    .-...     .......+....++.+..+.+.++
T Consensus        65 ~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~-L~~~~~~--~----~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~l  132 (277)
T cd05062          65 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGD-LKSYLRS--L----RPEME-----NNPVQAPPSLKKMIQMAGEIADGM  132 (277)
T ss_pred             hCCCCCeeeEEEEEcCCCCeEEEEecCCCCC-HHHHHHH--c----Ccccc-----ccccccCCCHHHHHHHHHHHHHHH
Confidence            4667778777776655556777888776522 1100000  0    00000     000011122555666677778888


Q ss_pred             eeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |.               +++.                       |. ..+.++. + |||||    
T Consensus       133 ~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  212 (277)
T cd05062         133 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW  212 (277)
T ss_pred             HHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHH
Confidence            8888888888875 44               2221                       11 2345788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                               |.+.+..++...+..+..++.|..+|..+.+++.+||+.||++|||+.++++.|+
T Consensus       213 el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         213 EIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence                     4566667777777776666778889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.58  E-value=1.2e-16  Score=128.07  Aligned_cols=149  Identities=15%  Similarity=0.084  Sum_probs=105.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..|||+|+++++. +    ..    .+..         .+.....+...+...+..+++.|
T Consensus       120 ~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~-L----~~----~l~~---------~~~~~~~l~~~~~~~i~~qi~~a  181 (478)
T PTZ00267        120 AACDHFGIVKHFDDFKSDDKLLLIMEYGSGGD-L----NK----QIKQ---------RLKEHLPFQEYEVGLLFYQIVLA  181 (478)
T ss_pred             HhCCCCCEeEEEEEEEECCEEEEEEECCCCCC-H----HH----HHHH---------HHhccCCCCHHHHHHHHHHHHHH
Confidence            46788899988887776777888999887632 1    11    0000         01112223344455556677788


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |+               +++                       +|. ....++. + |||||   
T Consensus       182 L~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l  261 (478)
T PTZ00267        182 LDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVIL  261 (478)
T ss_pred             HHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHH
Confidence            88888888888886 44               222                       111 3455888 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..+++..+..+...+.|..++.++.+||.+||..||++||++.+++.
T Consensus       262 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        262 YELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence                     5566677788888778777788889999999999999999999999999864

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.58  E-value=7e-16  Score=114.11  Aligned_cols=145  Identities=12%  Similarity=0.058  Sum_probs=94.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+...+..++|+|+++. |.    +..                 ++... ..+.....+.+..+.+.|
T Consensus        55 ~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-g~----L~~-----------------~l~~~~~~~~~~~~~~~~~qi~~~  112 (258)
T cd05078          55 QLSHKHLVLNYGVCVCGDESIMVQEYVKF-GS----LDT-----------------YLKKNKNLINISWKLEVAKQLAWA  112 (258)
T ss_pred             hCCCCChhheeeEEEeCCCcEEEEecCCC-Cc----HHH-----------------HHhcCCCCCCHHHHHHHHHHHHHH
Confidence            56788888877766655667777777765 31    111                 22222 123455566677788888


Q ss_pred             ceeeccCCcccccc-ccc----------------------------------------ccccC-CC-CCccc-e-EEEec
Q psy1684          84 LCVNLRKPCVQVSC-RIY----------------------------------------LVHGT-NL-SGVVV-S-AVDFG  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~----------------------------------------l~~~~-~~-~~~~~-s-VwsfG  118 (189)
                      +.++|..+++|+|+ |..                                        +++|. .. ..++. + |||||
T Consensus       113 l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  192 (258)
T cd05078         113 LHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFG  192 (258)
T ss_pred             HHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHH
Confidence            88999999999885 431                                        11221 11 34788 9 99999


Q ss_pred             ------C-------CCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ------S-------GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ------~-------~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                            +       ...+........  ..+...|...+.++.+|+.+||+.||++|||+++|++.|+
T Consensus       193 ~~l~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         193 TTLWEIFSGGDKPLSALDSQKKLQFY--EDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHcCCCCChhhccHHHHHHHH--HccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                  1       222222222222  2244566677789999999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.58  E-value=1e-15  Score=112.51  Aligned_cols=147  Identities=24%  Similarity=0.408  Sum_probs=98.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .+.|+|++++++.+......++|+|+.+.+.     +..                 ++.. ...+....+..+..+.+.+
T Consensus        48 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~i~~~  105 (250)
T cd05085          48 QYDHPNIVKLIGVCTQRQPIYIVMELVPGGD-----FLS-----------------FLRKKKDELKTKQLVKFALDAAAG  105 (250)
T ss_pred             hCCCCCcCeEEEEEecCCccEEEEECCCCCc-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            4567777777766666666777777766522     111                 1111 1122244445555566666


Q ss_pred             ceeeccCCcccccc-cc---------------c----------------------ccccC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------Y----------------------LVHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~----------------------l~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|...++|+|+ |+               +                      +++|. ..+.++. + |||||    
T Consensus       106 l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~  185 (250)
T cd05085         106 MAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLW  185 (250)
T ss_pred             HHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHH
Confidence            66777767777664 33               1                      11221 3355788 8 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                               |.+....++...+..+.++..|..+|.++.+++.+||+.+|++||++.++.+.|.
T Consensus       186 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         186 ETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence                     4455566777777888888888899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG4279|consensus

Probab=99.57  E-value=7.1e-16  Score=123.72  Aligned_cols=148  Identities=15%  Similarity=0.163  Sum_probs=102.4

Q ss_pred             CCCCCChHHHHHHhcCCCCCCCcEEE-ecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHH-hh
Q psy1684           2 YFGKIKRIEAEKKLLLPENDHGAFLI-RDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEH-YS   78 (189)
Q Consensus         2 ~~g~l~~~n~~~lL~~~~~~~g~fLv-re~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~-~~   78 (189)
                      .|..+.|+|+|++||++. ++|.|.| +|-.++ |+++-.++.. .|                   .+. -...+.| .+
T Consensus       625 LH~~LrHkNIVrYLGs~s-enGf~kIFMEqVPG-GSLSsLLrsk-WG-------------------PlKDNEstm~fYtk  682 (1226)
T KOG4279|consen  625 LHSTLRHKNIVRYLGSVS-ENGFFKIFMEQVPG-GSLSSLLRSK-WG-------------------PLKDNESTMNFYTK  682 (1226)
T ss_pred             HHHHHhhHhHHHHhhccC-CCCeEEEEeecCCC-CcHHHHHHhc-cC-------------------CCccchhHHHHHHH
Confidence            477899999999999876 4565554 566665 5332222220 00                   111 1223443 45


Q ss_pred             hccCCceeeccCCcccccccc--------------------------------------cccccC---CCCCccc-e-EE
Q psy1684          79 KDADGLCVNLRKPCVQVSCRI--------------------------------------YLVHGT---NLSGVVV-S-AV  115 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~~~p~--------------------------------------~l~~~~---~~~~~~~-s-Vw  115 (189)
                      ++..|+.|+|...|+|||+.-                                      .||+|.   -...|.. + ||
T Consensus       683 QILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIW  762 (1226)
T KOG4279|consen  683 QILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIW  762 (1226)
T ss_pred             HHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhh
Confidence            667899999999999998765                                      333333   2234889 9 99


Q ss_pred             Eec------------CCC-CChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         116 DFG------------SGG-MTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       116 sfG------------~~~-~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      |||            |-. -++...+.+|. -...||+|...+.+.+.+|.+|+..||.+||++++++..
T Consensus       763 S~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  763 SFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             hccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            999            322 34566677773 456799999999999999999999999999999998763

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.57  E-value=1.7e-15  Score=112.38  Aligned_cols=108  Identities=44%  Similarity=0.730  Sum_probs=82.8

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c----------------------ccccC-CCCC
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y----------------------LVHGT-NLSG  109 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~----------------------l~~~~-~~~~  109 (189)
                      .+..+.....+.+.++.++|..+++|+|+ |.               +                      +++|. ....
T Consensus       100 ~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  179 (262)
T cd05071         100 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR  179 (262)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCC
Confidence            35556666777778888888888888875 43               1                      11111 2345


Q ss_pred             ccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         110 VVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       110 ~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                      ++. + |||||             |.+....++...+..+..++.+..+|..+.+|+.+||+.||++||++++++..|+.
T Consensus       180 ~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         180 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            788 8 99999             44555677777777777777778899999999999999999999999999999987


Q ss_pred             HH
Q psy1684         175 FF  176 (189)
Q Consensus       175 ~~  176 (189)
                      .+
T Consensus       260 ~~  261 (262)
T cd05071         260 YF  261 (262)
T ss_pred             hc
Confidence            65

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.57  E-value=6.8e-16  Score=115.62  Aligned_cols=109  Identities=24%  Similarity=0.449  Sum_probs=78.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc------------------------ccC-C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV------------------------HGT-N  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~------------------------~~~-~  106 (189)
                      ++..+...+..+.+.|+.++|..+++|+|+ |.               +++                        +|. .
T Consensus       104 l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~  183 (283)
T cd05080         104 LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK  183 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhc
Confidence            456666777778888888888888888885 43               111                        111 2


Q ss_pred             CCCccc-e-EEEec------CCC---------------------CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccc
Q psy1684         107 LSGVVV-S-AVDFG------SGG---------------------MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLK  157 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------~~~---------------------~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~  157 (189)
                      ...++. + |||||      +.+                     .....+...+..+.+++.|..+|.++.+++.+||+.
T Consensus       184 ~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  263 (283)
T cd05080         184 ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWET  263 (283)
T ss_pred             ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhcc
Confidence            345788 9 99999      111                     111223333445666677888999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHH
Q psy1684         158 DPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       158 ~p~~RP~~~~i~~~l~~~~  176 (189)
                      ||++|||+++|+..|+.+.
T Consensus       264 ~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         264 EAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             ChhhCCCHHHHHHHHHHhh
Confidence            9999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.57  E-value=1.1e-15  Score=112.54  Aligned_cols=146  Identities=12%  Similarity=0.064  Sum_probs=100.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+......++|+|+.+++.     +..                 ++...  ..+....+.....+.+
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~i~~~l~  111 (256)
T cd08529          54 AKLDSSYIIRYYESFLDKGKLNIVMEYAENGD-----LHK-----------------LLKMQRGRPLPEDQVWRFFIQIL  111 (256)
T ss_pred             HhcCCCCeehheeeeccCCEEEEEEEeCCCCc-----HHH-----------------HHHHhcCCCCCHHHHHHHHHHHH
Confidence            35678888888877766666788888776522     111                 12111  1233444455556667


Q ss_pred             CCceeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      .++.++|..+++|+|+ |.                                    ++++|. ....++. + |||||   
T Consensus       112 ~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  191 (256)
T cd08529         112 LGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVL  191 (256)
T ss_pred             HHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHH
Confidence            7777888877777775 33                                    111221 3345788 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                               |...+..++...+..+..++.+...+.++.+++.+||+.+|++||++.+|++.
T Consensus       192 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         192 YECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence                     55556667777777787777888899999999999999999999999998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.57  E-value=6.6e-16  Score=114.58  Aligned_cols=106  Identities=13%  Similarity=0.180  Sum_probs=74.6

Q ss_pred             HhHHHHHhhhccCCceeeccCCccccccc-c------------------------------------cccccC-CCCCcc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSCR-I------------------------------------YLVHGT-NLSGVV  111 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~p-~------------------------------------~l~~~~-~~~~~~  111 (189)
                      ...+..+..+.+.|+.++|..+++|+|+. .                                    ++++|. ....++
T Consensus       105 ~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  184 (267)
T cd08228         105 ERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCC
Confidence            44555666677778888888888887753 3                                    122222 335578


Q ss_pred             c-e-EEEec------------CCCC--ChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         112 V-S-AVDFG------------SGGM--TNAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~--~~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                      . + |||||            |.+.  +..++...+..+..++.| ...+..+.++|.+||..+|++||+|.+|++.|++
T Consensus       185 ~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~  264 (267)
T cd08228         185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ  264 (267)
T ss_pred             chhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence            8 8 99999            2111  234566666555545444 4688999999999999999999999999999987


Q ss_pred             H
Q psy1684         175 F  175 (189)
Q Consensus       175 ~  175 (189)
                      +
T Consensus       265 ~  265 (267)
T cd08228         265 M  265 (267)
T ss_pred             h
Confidence            5

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.57  E-value=1.3e-15  Score=113.09  Aligned_cols=155  Identities=22%  Similarity=0.323  Sum_probs=101.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+......++|+|+.++ +.+.-.+..  .     . ...      .....+.+.++.....+.+.|
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~-~~L~~~l~~--~-----~-~~~------~~~~~~~~~~~~~~~~~l~~~  118 (269)
T cd05044          54 SNFNHPNIVKLLGVCLLNEPQYIIMELMEG-GDLLSYLRD--A-----R-VER------FGPPLLTLKELLDICLDVAKG  118 (269)
T ss_pred             HhcCCCCeeeEeeeecCCCCeEEEEeccCC-CcHHHHHHH--h-----h-hcc------cCCccccHHHHHHHHHHHHHH
Confidence            356778888877776666667778877765 311000000  0     0 000      001123355556666666777


Q ss_pred             ceeeccCCcccccc-ccc-------------------------------------------ccccC-CCCCccc-e-EEE
Q psy1684          84 LCVNLRKPCVQVSC-RIY-------------------------------------------LVHGT-NLSGVVV-S-AVD  116 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~-------------------------------------------l~~~~-~~~~~~~-s-Vws  116 (189)
                      +.++|...++|+|+ |..                                           +++|. ..+.++. + |||
T Consensus       119 l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  198 (269)
T cd05044         119 CVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWS  198 (269)
T ss_pred             HHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHH
Confidence            77777777777764 331                                           11111 3355788 8 999


Q ss_pred             ec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         117 FG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       117 fG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      ||             |+..+..++...+..+.++..|..+|..+.+++.+||..+|.+||++.+|++.|+
T Consensus       199 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         199 FGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            99             3444566777777777777888899999999999999999999999999998885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.56  E-value=1.7e-15  Score=111.69  Aligned_cols=106  Identities=32%  Similarity=0.486  Sum_probs=81.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------cccC-CCCCccc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NLSGVVV  112 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~~~~~~  112 (189)
                      +.......+..+.+.++.++|..+++|+|+ |.               ++                  ++|. ..+.++.
T Consensus        97 ~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~  176 (254)
T cd05083          97 VSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSS  176 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCc
Confidence            335556666777788888888888888885 44               11                  1111 3356888


Q ss_pred             -e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         113 -S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       113 -s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                       + |||||             |.+.+..++...+.++.+++.+..+|.++.+++.+||+.+|++||++++|+..|+
T Consensus       177 ~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         177 KSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence             9 99999             4455666777778888888878889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0591|consensus

Probab=99.56  E-value=2.4e-16  Score=114.18  Aligned_cols=152  Identities=14%  Similarity=0.114  Sum_probs=104.3

Q ss_pred             CCCChHHHHHHhc-C-CCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLL-L-PENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~-~-~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++ . ..+.+-.+||+|++.. |+++-        .++||+-.         +..|+-..+-.+..+..
T Consensus        73 kQL~HpNIVqYy~~~f~~~~evlnivmE~c~~-GDLsq--------mIk~~K~q---------kr~ipE~~Vwk~f~QL~  134 (375)
T KOG0591|consen   73 KQLNHPNIVQYYAHSFIEDNEVLNIVMELCDA-GDLSQ--------MIKHFKKQ---------KRLIPEKTVWKYFVQLC  134 (375)
T ss_pred             HhcCCchHHHHHHHhhhccchhhHHHHHhhcc-cCHHH--------HHHHHHhc---------cccCchHHHHHHHHHHH
Confidence            5789999999997 2 2233347999999988 54422        33443221         22333333333444444


Q ss_pred             CCceeecc--C--Ccccccc-cc---------------cccccC----------------------CCCCccc-e-EEEe
Q psy1684          82 DGLCVNLR--K--PCVQVSC-RI---------------YLVHGT----------------------NLSGVVV-S-AVDF  117 (189)
Q Consensus        82 ~gl~~~~~--~--~~~~~~~-p~---------------~l~~~~----------------------~~~~~~~-s-Vwsf  117 (189)
                      .++..+|.  .  .++|||+ |.               ||++-.                      ..++|+. | |||.
T Consensus       135 ~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl  214 (375)
T KOG0591|consen  135 RALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSL  214 (375)
T ss_pred             HHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence            45555555  2  3778885 54               222211                      7788999 9 9999


Q ss_pred             c------------CCCCChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         118 G------------SGGMTNAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      |            |.|-+..++..+|..|.-+|.| ...+.++..|+..|+..||+.||+...++..+.
T Consensus       215 GCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  215 GCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             HHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            9            7777888999999999888888 678899999999999999999998544544443

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.56  E-value=2.5e-15  Score=112.62  Aligned_cols=150  Identities=21%  Similarity=0.292  Sum_probs=95.6

Q ss_pred             CCChHHHHHHhcCCCCC--CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPEND--HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~--~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a   81 (189)
                      .+.|+|++++.+.+...  .+.++|+|+.+++.     +..                 ++... ..+.......+..+.+
T Consensus        62 ~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~~i~  119 (284)
T cd05079          62 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS-----LKE-----------------YLPRNKNKINLKQQLKYAVQIC  119 (284)
T ss_pred             hCCCCCeeeeeeEEecCCCCceEEEEEccCCCC-----HHH-----------------HHHhccCCCCHHHHHHHHHHHH
Confidence            45666666666544332  34567777665421     111                 22211 1233555566667777


Q ss_pred             CCceeeccCCcccccc-cc---------------ccc------------------------ccC-CCCCccc-e-EEEec
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLV------------------------HGT-NLSGVVV-S-AVDFG  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~------------------------~~~-~~~~~~~-s-VwsfG  118 (189)
                      .++.++|..+++|+|+ |.               +++                        +|. ....++. + |||||
T Consensus       120 ~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  199 (284)
T cd05079         120 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFG  199 (284)
T ss_pred             HHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhh
Confidence            7888888888888875 33               111                        111 3345788 9 99999


Q ss_pred             ---CC-------CCC-----------------hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ---SG-------GMT-----------------NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ---~~-------~~~-----------------~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                         |.       +..                 .......+..+.+.+.+..++.++.+|+.+||+.||++|||++++++.
T Consensus       200 ~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         200 VTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             hhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence               11       111                 122233345566677788899999999999999999999999999999


Q ss_pred             HHHHH
Q psy1684         172 LEDFF  176 (189)
Q Consensus       172 l~~~~  176 (189)
                      |+.++
T Consensus       280 l~~~~  284 (284)
T cd05079         280 FEAIL  284 (284)
T ss_pred             HHhhC
Confidence            98763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0584|consensus

Probab=99.55  E-value=8.1e-16  Score=121.46  Aligned_cols=110  Identities=11%  Similarity=0.170  Sum_probs=88.8

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccC--Ccccccccc------------------------------------ccc
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRK--PCVQVSCRI------------------------------------YLV  102 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~--~~~~~~~p~------------------------------------~l~  102 (189)
                      |+.....+.++.+..|++++..||.|+|+.  ||+|||+.-                                    .||
T Consensus       133 Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMA  212 (632)
T KOG0584|consen  133 YRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMA  212 (632)
T ss_pred             HHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccC
Confidence            666566667888999999999999999986  789998644                                    556


Q ss_pred             ccCCCCCccc-e-EEEec------------CCCC-ChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         103 HGTNLSGVVV-S-AVDFG------------SGGM-TNAEVLHQVEHGYRMPC-PPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       103 ~~~~~~~~~~-s-VwsfG------------~~~~-~~~~~~~~v~~g~~~~~-p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                      +|.....|++ . |||||            |... ++.+|+++|..|..|.. ..--.++++++|.+|+.. .++|||+.
T Consensus       213 PEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~  291 (632)
T KOG0584|consen  213 PEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAK  291 (632)
T ss_pred             hHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHH
Confidence            6657788999 9 99999            4443 57899999999976532 233458999999999998 99999999


Q ss_pred             HHHHH
Q psy1684         167 TLQWK  171 (189)
Q Consensus       167 ~i~~~  171 (189)
                      |+++.
T Consensus       292 eLL~d  296 (632)
T KOG0584|consen  292 ELLKD  296 (632)
T ss_pred             HHhhC
Confidence            99864

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.55  E-value=2e-15  Score=111.77  Aligned_cols=107  Identities=43%  Similarity=0.717  Sum_probs=81.8

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc----------------------cC-CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH----------------------GT-NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~----------------------~~-~~~  108 (189)
                      ++......+..+.+.++.++|..+++|+|+ |.               +++.                      |. ..+
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  178 (260)
T cd05069          99 LKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccC
Confidence            335666667777788888888888888885 43               1111                      10 234


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      .++. + |||||             |.+.+..+....+..+..++.|...|..+.+++.+||..||++||++++|.+.|+
T Consensus       179 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  258 (260)
T cd05069         179 RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE  258 (260)
T ss_pred             CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence            5788 8 99999             4455566777777777777778889999999999999999999999999999886


Q ss_pred             H
Q psy1684         174 D  174 (189)
Q Consensus       174 ~  174 (189)
                      .
T Consensus       259 ~  259 (260)
T cd05069         259 D  259 (260)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.55  E-value=1.8e-15  Score=113.87  Aligned_cols=158  Identities=21%  Similarity=0.332  Sum_probs=97.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+...+..++|.|+... +.+.-.+..  . ....       .........+....+.....+.+.|+
T Consensus        75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~--~-~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~al  143 (296)
T cd05051          75 RLSDPNIARLLGVCTVDPPLCMIMEYMEN-GDLNQFLQK--H-VAET-------SGLACNSKSLSFSTLLYMATQIASGM  143 (296)
T ss_pred             hcCCCCEeEEEEEEecCCCcEEEEecCCC-CCHHHHHHh--c-cccc-------ccccccCCCCCHHHHHHHHHHHHHHH
Confidence            45667777766665555566777776654 211000000  0 0000       00001122344566667777888889


Q ss_pred             eeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+               ++++                       |. ..+.++. + |||||    
T Consensus       144 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~  223 (296)
T cd05051         144 RYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLW  223 (296)
T ss_pred             HHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHH
Confidence            9999999999885 44               2221                       11 2346788 9 99999    


Q ss_pred             ----------CCCCChHHHHHHHHcC-------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHG-------YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g-------~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |...+..+++..+...       ...+.|..+|.++.+|+.+||+.||++|||+.+|++.|+
T Consensus       224 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         224 EILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence                      2334455555554332       123456678999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0195|consensus

Probab=99.55  E-value=1.4e-15  Score=110.03  Aligned_cols=152  Identities=16%  Similarity=0.178  Sum_probs=108.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      -.+|+|+..+||.|..++..-+|..+++.+..|.+..-.  .+.                  .+...+.+.|..+++.|+
T Consensus       243 ifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~--t~v------------------vvd~sqav~faldiargm  302 (448)
T KOG0195|consen  243 IFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ--TSV------------------VVDHSQAVRFALDIARGM  302 (448)
T ss_pred             eecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC--ccE------------------EEecchHHHHHHHHHhhH
Confidence            357999999999998888888889999985544222111  000                  011344455555555555


Q ss_pred             eeeccC---------------------------------Cccccc-ccccccccCCCC---Cccc--e-EEEec------
Q psy1684          85 CVNLRK---------------------------------PCVQVS-CRIYLVHGTNLS---GVVV--S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~---------------------------------~~~~~~-~p~~l~~~~~~~---~~~~--s-VwsfG------  118 (189)
                      +++|+.                                 .++.|. .|.|+++|....   ..+.  + .|||+      
T Consensus       303 aflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel  382 (448)
T KOG0195|consen  303 AFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWEL  382 (448)
T ss_pred             HHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHh
Confidence            555542                                 122222 355777776322   2344  6 99999      


Q ss_pred             ------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       119 ------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                            |.++++.+.--+| .+|.|..+|+...+.+.+||.-|...||.+||.|..|+-.|+.|.
T Consensus       383 ~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  383 NTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             hccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence                  8999998887777 799999999999999999999999999999999999999998763

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.55  E-value=5.9e-16  Score=133.53  Aligned_cols=151  Identities=18%  Similarity=0.176  Sum_probs=95.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      +.++|+|++++++.+...+..|||+|+++++.     +..                 ++.   .+.......+..+++.|
T Consensus       738 ~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~-----L~~-----------------~l~---~l~~~~~~~i~~~ia~~  792 (968)
T PLN00113        738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN-----LSE-----------------VLR---NLSWERRRKIAIGIAKA  792 (968)
T ss_pred             hhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc-----HHH-----------------HHh---cCCHHHHHHHHHHHHHH
Confidence            56889999999999988888999999998732     211                 111   12234444555666667


Q ss_pred             ceeec---cCCcccccc-cc-------------------------------cccccC-CCCCccc-e-EEEec------C
Q psy1684          84 LCVNL---RKPCVQVSC-RI-------------------------------YLVHGT-NLSGVVV-S-AVDFG------S  119 (189)
Q Consensus        84 l~~~~---~~~~~~~~~-p~-------------------------------~l~~~~-~~~~~~~-s-VwsfG------~  119 (189)
                      +.|+|   ..+++|+|+ |.                               ++|+|. ....|+. + |||||      .
T Consensus       793 L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~  872 (968)
T PLN00113        793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELL  872 (968)
T ss_pred             HHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHH
Confidence            77777   446667664 32                               344544 3456899 9 99999      1


Q ss_pred             CCCC--------hHHHHHHHHc----C-----CCC------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         120 GGMT--------NAEVLHQVEH----G-----YRM------PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       120 ~~~~--------~~~~~~~v~~----g-----~~~------~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                      .+..        ...+......    .     ..+      +.+...+.++.+++.+||+.||++||||++|++.|+.+.
T Consensus       873 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        873 TGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             hCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence            1110        0111111110    0     000      111123346778999999999999999999999999987


Q ss_pred             hhc
Q psy1684         177 TME  179 (189)
Q Consensus       177 ~~~  179 (189)
                      +..
T Consensus       953 ~~~  955 (968)
T PLN00113        953 RSS  955 (968)
T ss_pred             ccc
Confidence            743

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.54  E-value=1.8e-15  Score=111.91  Aligned_cols=107  Identities=43%  Similarity=0.712  Sum_probs=83.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc----------------------cccC-CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL----------------------VHGT-NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-~~~  108 (189)
                      +....+..+..+.+.++.++|..+++|+|+ |.               ++                      ++|. ...
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (260)
T cd05070          99 LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcC
Confidence            445666677777788888888888888885 44               11                      1111 234


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      .++. + |||||             |.+.+..++...+..+.+++.|..+|.++.+|+.+||..||++|||+.++.+.|+
T Consensus       179 ~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  258 (260)
T cd05070         179 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE  258 (260)
T ss_pred             CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence            5778 8 99999             4556667777778778788888899999999999999999999999999998886


Q ss_pred             H
Q psy1684         174 D  174 (189)
Q Consensus       174 ~  174 (189)
                      .
T Consensus       259 ~  259 (260)
T cd05070         259 D  259 (260)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.54  E-value=1.9e-15  Score=114.40  Aligned_cols=147  Identities=21%  Similarity=0.308  Sum_probs=98.2

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC--CcCHhHHHHHhhhccCCc
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT--TIHYPELVEHYSKDADGL   84 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~--~~~l~~li~~~~~~a~gl   84 (189)
                      +|+|++++++.+......++|.|+.+.+.     +..                 ++....  .+...++..+..+.+.|+
T Consensus        97 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~i~~~~~~~l~~~~~~~i~~~i~~~l  154 (302)
T cd05055          97 NHENIVNLLGACTIGGPILVITEYCCYGD-----LLN-----------------FLRRKRESFLTLEDLLSFSYQVAKGM  154 (302)
T ss_pred             CCCCcceEEEEEecCCceEEEEEcCCCCc-----HHH-----------------HHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            57777777766655566677777766522     111                 222111  134566666667777788


Q ss_pred             eeeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|...++|+|+ |.               ++                       ++|. ....++. + |||||    
T Consensus       155 ~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~  234 (302)
T cd05055         155 AFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLW  234 (302)
T ss_pred             HHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHH
Confidence            8888888888775 33               11                       1221 2345688 9 99999    


Q ss_pred             ---------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         119 ---------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       119 ---------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                               |.+... ......+..+.++..|...++++.+++.+||..+|++|||+.+|++.|+++
T Consensus       235 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         235 EIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                     222332 234444566777777778899999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.54  E-value=3.5e-15  Score=110.35  Aligned_cols=107  Identities=46%  Similarity=0.762  Sum_probs=82.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc----------------------cccC-CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL----------------------VHGT-NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-~~~  108 (189)
                      ++...+..+..+.+.++.++|..+++|+|+ |.               ++                      ++|. ...
T Consensus       100 ~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  179 (261)
T cd05034         100 LRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYG  179 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccC
Confidence            445556666677777888888888888875 33               11                      1111 234


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      .++. + |||||             |.+.+...+...+..+.+.+.|..+|.++.+++.+||..||.+||+++++...|+
T Consensus       180 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~  259 (261)
T cd05034         180 RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE  259 (261)
T ss_pred             CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence            5788 8 99999             4455667788888888888888899999999999999999999999999998886


Q ss_pred             H
Q psy1684         174 D  174 (189)
Q Consensus       174 ~  174 (189)
                      .
T Consensus       260 ~  260 (261)
T cd05034         260 D  260 (261)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.54  E-value=2.1e-15  Score=111.20  Aligned_cols=103  Identities=14%  Similarity=0.151  Sum_probs=76.7

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCCc
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGV  110 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~  110 (189)
                      ....+..+..+.+.|+.++|..+++|+|+ |.                                    ++++|. ....+
T Consensus        98 ~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  177 (255)
T cd08219          98 PEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPY  177 (255)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCc
Confidence            34455566677777888888888888875 33                                    111121 23447


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +. + |||||            |.+.+.......+..+...+.|..++.++.+|+.+||+.||++|||+.+|+..
T Consensus       178 ~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         178 NNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            78 8 99999            44555566667777787777888899999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.54  E-value=1.9e-15  Score=112.05  Aligned_cols=109  Identities=17%  Similarity=0.198  Sum_probs=77.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSG  109 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~  109 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+                                    ++++|. ....
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  182 (267)
T cd08224         103 IPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCC
Confidence            334455556666777788888888878775 33                                    111221 3455


Q ss_pred             ccc-e-EEEec------------C--CCCChHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         110 VVV-S-AVDFG------------S--GGMTNAEVLHQVEHGYRMPCPP-GCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       110 ~~~-s-VwsfG------------~--~~~~~~~~~~~v~~g~~~~~p~-~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ++. + |||||            |  ...+..++...+..+..++.|. ..+.++.+++.+||..+|++|||+.+|++.|
T Consensus       183 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~  262 (267)
T cd08224         183 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVA  262 (267)
T ss_pred             CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence            888 9 99999            2  1223345666666777777776 7889999999999999999999999999999


Q ss_pred             HHHH
Q psy1684         173 EDFF  176 (189)
Q Consensus       173 ~~~~  176 (189)
                      +++.
T Consensus       263 ~~~~  266 (267)
T cd08224         263 KEMH  266 (267)
T ss_pred             HHhc
Confidence            8764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.53  E-value=4.6e-15  Score=109.73  Aligned_cols=107  Identities=37%  Similarity=0.667  Sum_probs=81.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccC-CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGT-NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~-~~~  108 (189)
                      +....+.....+.+.++.++|..+++|+|+ |.               +++                      +|. ...
T Consensus        99 ~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  178 (260)
T cd05067          99 LTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG  178 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccC
Confidence            335555666667777888888888888875 33               111                      111 234


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      .++. + |||||             |.+.+..++...+..+.+++.|..+|.++.+++.+||..||++||++++|...|+
T Consensus       179 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  258 (260)
T cd05067         179 TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE  258 (260)
T ss_pred             CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence            4678 8 99999             4455666777778888888888899999999999999999999999999999886


Q ss_pred             H
Q psy1684         174 D  174 (189)
Q Consensus       174 ~  174 (189)
                      .
T Consensus       259 ~  259 (260)
T cd05067         259 D  259 (260)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.53  E-value=6.1e-15  Score=113.35  Aligned_cols=110  Identities=26%  Similarity=0.443  Sum_probs=85.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~  107 (189)
                      +....+..+..+++.|+.++|..+++|+|+ |+               |++...                        ..
T Consensus       170 l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  249 (337)
T cd05054         170 LTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD  249 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC
Confidence            335567778888899999999999999996 44               222211                        23


Q ss_pred             CCccc-e-EEEec-------------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||             |.+... ......+..+.++..|..+++++.+|+.+||+.+|++||++.+|++.
T Consensus       250 ~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         250 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            45788 9 99999             333222 23444556777777888899999999999999999999999999999


Q ss_pred             HHHHHh
Q psy1684         172 LEDFFT  177 (189)
Q Consensus       172 l~~~~~  177 (189)
                      |+.+++
T Consensus       330 l~~~~~  335 (337)
T cd05054         330 LGDLLQ  335 (337)
T ss_pred             HHHHHh
Confidence            999886

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.53  E-value=3.1e-15  Score=110.00  Aligned_cols=105  Identities=30%  Similarity=0.564  Sum_probs=78.5

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c-----------------------ccccC-CCC
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y-----------------------LVHGT-NLS  108 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~-----------------------l~~~~-~~~  108 (189)
                      ....+.....+.+.++.++|...++|+|+ |.               +                       +++|. ..+
T Consensus        91 ~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  170 (251)
T cd05041          91 TVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYG  170 (251)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccC
Confidence            35555556666677788888888888875 33               1                       11111 335


Q ss_pred             Cccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         109 GVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       109 ~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      .++. + |||||             |.+.+.......+..+.+++.|..+|.++.+++.+||..+|.+|||+.++++.|+
T Consensus       171 ~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         171 RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            5788 9 99999             4455556666677777777788899999999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.52  E-value=4.1e-15  Score=112.15  Aligned_cols=158  Identities=20%  Similarity=0.288  Sum_probs=96.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+...+..++|.|+...+. +.-.+..  .. ..     ...  .......+....+..+..+.+.++
T Consensus        75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~--~~-~~-----~~~--~~~~~~~~~~~~~~~~~~~i~~al  143 (296)
T cd05095          75 RLKDPNIIRLLAVCITSDPLCMITEYMENGD-LNQFLSR--HE-PQ-----EAA--EKADVVTISYSTLIFMATQIASGM  143 (296)
T ss_pred             hCCCCCcceEEEEEecCCccEEEEEeCCCCc-HHHHHHh--cC-cc-----ccc--ccccccccCHHHHHHHHHHHHHHH
Confidence            4567777777666555566677777766522 1000000  00 00     000  000011233555666777778888


Q ss_pred             eeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+               |++...                        ..+.++. + |||||    
T Consensus       144 ~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~  223 (296)
T cd05095         144 KYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLW  223 (296)
T ss_pred             HHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHH
Confidence            8888888888885 44               222210                        2345788 9 99999    


Q ss_pred             ----------CCCCChHHHHHHHH-------cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVE-------HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~-------~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |...+..+++..+.       .....+.|..||..+.+||.+||+.||++||++.+|.+.|+
T Consensus       224 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         224 EILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                      33334444443331       12234566789999999999999999999999999998885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0582|consensus

Probab=99.52  E-value=1.1e-15  Score=116.70  Aligned_cols=147  Identities=14%  Similarity=0.120  Sum_probs=97.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .-++|||++.+.-+.......|+|+.+|..|..+.|         +++         |...+  +.-..+....+.+.+|
T Consensus        79 sl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldI---------ik~---------~~~~G--l~E~~Ia~iLre~Lka  138 (516)
T KOG0582|consen   79 SLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDI---------IKT---------YYPDG--LEEASIATILREVLKA  138 (516)
T ss_pred             hhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHH---------HHH---------Hcccc--ccHHHHHHHHHHHHHH
Confidence            357899999977666667778999999988442211         111         01101  1111122233455567


Q ss_pred             ceeeccCCcccccccc-----------------------------------------cccccC---CCCCccc-e-EEEe
Q psy1684          84 LCVNLRKPCVQVSCRI-----------------------------------------YLVHGT---NLSGVVV-S-AVDF  117 (189)
Q Consensus        84 l~~~~~~~~~~~~~p~-----------------------------------------~l~~~~---~~~~~~~-s-Vwsf  117 (189)
                      |.|+|..+.||||+.+                                         |||+|.   ....|+. + ||||
T Consensus       139 L~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSf  218 (516)
T KOG0582|consen  139 LDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSF  218 (516)
T ss_pred             HHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhh
Confidence            8888888888887644                                         677776   3455999 9 9999


Q ss_pred             c------------CCCCChHHHHHHHHcCCCCCCC----------CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         118 G------------SGGMTNAEVLHQVEHGYRMPCP----------PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v~~g~~~~~p----------~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      |            |..+.+.+++-.-.+|. +|.|          ...+..+++++..|+..||++|||++++++.
T Consensus       219 GITA~ELA~G~aPf~k~pPmkvLl~tLqn~-pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  219 GITACELAHGHAPFSKYPPMKVLLLTLQND-PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             hHHHHHHhcCCCCcccCChHHHHHHHhcCC-CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            9            88888877765444443 2211          1345678899999999999999999999864

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.52  E-value=5.5e-15  Score=110.17  Aligned_cols=156  Identities=24%  Similarity=0.365  Sum_probs=102.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+...+..++|+|+.+. +.    +..    .+..     ...+ -......+.......+..+.+.
T Consensus        63 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~----L~~----~i~~-----~~~~~~~~~~~~l~~~~~~~~~~~l~~  128 (275)
T cd05046          63 RKLSHKNVVRLLGLCREAEPHYMILEYTDL-GD----LKQ----FLRA-----TKSKDEKLKPPPLSTKQKVALCTQIAL  128 (275)
T ss_pred             HhcCCcceeeeEEEECCCCcceEEEEecCC-Cc----HHH----HHHh-----cccccccccccCCCHHHHHHHHHHHHH
Confidence            456788888888777666677888887765 31    111    0000     0000 0000113446667777788888


Q ss_pred             CceeeccCCcccccc-cc---------------ccc----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLV----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      ++.++|...++|+|+ |+               +++                      +|. ....++. + |||||   
T Consensus       129 ~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  208 (275)
T cd05046         129 GMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM  208 (275)
T ss_pred             HHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence            999999999999986 44               111                      111 2334677 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGY-RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~-~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |.+.+..++...+..+. ..+.+..+|..+.+++.+||+.||++||++.+++..|+
T Consensus       209 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         209 WEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence                      33444566666665443 34456789999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0579|consensus

Probab=99.52  E-value=1.1e-14  Score=116.14  Aligned_cols=146  Identities=10%  Similarity=0.047  Sum_probs=102.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ....||++++||+.-..+...+|+.|++.+|-     +-.        .        .+.-...+.-.++--.+.++.++
T Consensus        84 a~CdHP~ivkLl~ayy~enkLwiliEFC~GGA-----VDa--------i--------mlEL~r~LtE~QIqvvc~q~ldA  142 (1187)
T KOG0579|consen   84 AECDHPVIVKLLSAYYFENKLWILIEFCGGGA-----VDA--------I--------MLELGRVLTEDQIQVVCYQVLDA  142 (1187)
T ss_pred             hcCCChHHHHHHHHHhccCceEEEEeecCCch-----HhH--------H--------HHHhccccchHHHHHHHHHHHHH
Confidence            34579999999986666677888888887632     100        0        11111222212222223344566


Q ss_pred             ceeeccCCcccccccc-------------------------------------cccccC------CCCCccc-e-EEEec
Q psy1684          84 LCVNLRKPCVQVSCRI-------------------------------------YLVHGT------NLSGVVV-S-AVDFG  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~p~-------------------------------------~l~~~~------~~~~~~~-s-VwsfG  118 (189)
                      |.++|+..|||||+..                                     |||+++      ...+|+. + |||||
T Consensus       143 Ln~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlG  222 (1187)
T KOG0579|consen  143 LNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLG  222 (1187)
T ss_pred             HHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhh
Confidence            7777777777776544                                     777776      6788999 9 99999


Q ss_pred             ------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                  ...+++..|+-+|.+...|  -.|..+...+.+++.+|+..||..||+.++|++
T Consensus       223 ITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  223 ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence                        6677888888888665433  358899999999999999999999999999986

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.52  E-value=9.8e-15  Score=108.04  Aligned_cols=105  Identities=36%  Similarity=0.719  Sum_probs=80.7

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc----------------------cccC-CCCCc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL----------------------VHGT-NLSGV  110 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-~~~~~  110 (189)
                      ...+..+..+.+.++.++|..+++|+|+ |.               ++                      ++|. ..+.+
T Consensus       101 ~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  180 (260)
T cd05073         101 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF  180 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCc
Confidence            5556666677778888888888888875 43               11                      1111 23456


Q ss_pred             cc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         111 VV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       111 ~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                      +. + |||||             |++.+..++...+..+..++.+...|.++.+++.+||+.||++||++.++.+.|+.
T Consensus       181 ~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         181 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            88 8 99999             44555667777777887778888899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.52  E-value=6.4e-15  Score=109.61  Aligned_cols=147  Identities=16%  Similarity=0.116  Sum_probs=93.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC----CCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG----RTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~----~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+......|+|+|+++. +++    ..                 ++..    ........+..+..+
T Consensus        50 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~L----~~-----------------~l~~~~~~~~~~~~~~~~~~~~~  107 (268)
T cd05086          50 RILQHPNILQCLGQCVEAIPYLLVFEYCEL-GDL----KS-----------------YLSQEQWHRRNSQLLLLQRMACE  107 (268)
T ss_pred             hccCCcchhheEEEecCCCccEEEEecCCC-CcH----HH-----------------HHHhhhcccccccHHHHHHHHHH
Confidence            357899999999988777788999999876 422    11                 1100    001113333444555


Q ss_pred             ccCCceeeccCCcccccc-cc---------------c-----------------------ccccCC--------CCCccc
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------Y-----------------------LVHGTN--------LSGVVV  112 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~-----------------------l~~~~~--------~~~~~~  112 (189)
                      .+.|+.++|...++|+|+ |.               +                       +++|..        ...++.
T Consensus       108 i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  187 (268)
T cd05086         108 IAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTK  187 (268)
T ss_pred             HHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCC
Confidence            666777777777777764 33               1                       122211        123577


Q ss_pred             -e-EEEec-------------CCCCChHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         113 -S-AVDFG-------------SGGMTNAEVLHQVEHGY-----RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       113 -s-VwsfG-------------~~~~~~~~~~~~v~~g~-----~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                       + |||||             |.+.+..+++..+..+.     ++..+...++.+++++..|| .+|++||++++|++.|
T Consensus       188 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         188 PSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             cchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence             8 99999             44445556665553321     23334456789999999999 6899999999999887


Q ss_pred             H
Q psy1684         173 E  173 (189)
Q Consensus       173 ~  173 (189)
                      .
T Consensus       267 ~  267 (268)
T cd05086         267 T  267 (268)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.51  E-value=6.4e-15  Score=108.53  Aligned_cols=144  Identities=12%  Similarity=0.080  Sum_probs=91.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++........++|+|+.+.+.     +..                 ++...  ..+....+..+..+.+.
T Consensus        55 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~  112 (256)
T cd08220          55 LLSHPNIIEYYENFLEDKALMIVMEYAPGGT-----LAE-----------------YIQKRCNSLLDEDTILHFFVQILL  112 (256)
T ss_pred             hCCCCchhheeeeEecCCEEEEEEecCCCCC-----HHH-----------------HHHHhcccCCCHHHHHHHHHHHHH
Confidence            4567777776655444455666776665421     111                 12111  11233444445556666


Q ss_pred             CceeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      ++.++|..+++|+|+ |.                                    ++++|. ....++. + |||||    
T Consensus       113 ~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~  192 (256)
T cd08220         113 ALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLY  192 (256)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHH
Confidence            667777766666654 22                                    222222 2344678 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+.+.......+..+...+.|..++.++.+++.+||+.||++|||+.+++.
T Consensus       193 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         193 ELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                    5555555555566666666778889999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.51  E-value=5.1e-15  Score=110.88  Aligned_cols=46  Identities=43%  Similarity=1.044  Sum_probs=40.0

Q ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         130 QVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       130 ~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                      .+..+.+++.+..+|.++.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         238 LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            3455666777888999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.51  E-value=6.3e-15  Score=108.69  Aligned_cols=66  Identities=30%  Similarity=0.609  Sum_probs=55.0

Q ss_pred             CCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       107 ~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+.++. + |||||             |.+....++...+..+.++..|...+.++++|+.+||+.+|++|||+.++++.
T Consensus       175 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         175 FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            356788 9 99999             33344566777777787777788899999999999999999999999999987


Q ss_pred             H
Q psy1684         172 L  172 (189)
Q Consensus       172 l  172 (189)
                      |
T Consensus       255 l  255 (256)
T cd05112         255 L  255 (256)
T ss_pred             h
Confidence            6

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=6.5e-15  Score=111.99  Aligned_cols=141  Identities=9%  Similarity=-0.005  Sum_probs=94.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|+++++..+...+..+||+|++.+ |+    +..                 ++.....+.......+..+.+.|+
T Consensus        49 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-g~----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~~l  106 (312)
T cd05585          49 QVNCPFIVPLKFSFQSPEKLYLVLAFING-GE----LFH-----------------HLQREGRFDLSRARFYTAELLCAL  106 (312)
T ss_pred             hCCCCcEeceeeEEecCCeEEEEEcCCCC-Cc----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45677777766665555667777777665 31    111                 232233444455555666778889


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++.                     |. ....++. + |||||      
T Consensus       107 ~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el  186 (312)
T cd05585         107 ENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEM  186 (312)
T ss_pred             HHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHH
Confidence            9999999999986 44               2221                     11 3445788 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                            |.+.+..++...+..+ .+..|..+++++.+++.+||+.||++||++.++
T Consensus       187 ~tg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~  241 (312)
T cd05585         187 LTGLPPFYDENVNEMYRKILQE-PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGA  241 (312)
T ss_pred             HhCCCCcCCCCHHHHHHHHHcC-CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence                  5555666666666554 355678899999999999999999999875433

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.51  E-value=6.5e-15  Score=108.59  Aligned_cols=101  Identities=11%  Similarity=0.123  Sum_probs=74.9

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCCcc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVV  111 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~  111 (189)
                      ...+..+..+.+.|+.++|...++|+|+ |.                                    ++++|. ..+.++
T Consensus       100 ~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  179 (256)
T cd08218         100 EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYN  179 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCC
Confidence            4455566667777777788777777764 22                                    112222 345577


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      . + |||||            |...+..+....+..+..++.|..++.++++++.+||+.+|++||++.+|++
T Consensus       180 ~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         180 NKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            8 8 99999            4444556666677778777788899999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.51  E-value=5.2e-15  Score=113.33  Aligned_cols=144  Identities=8%  Similarity=-0.041  Sum_probs=97.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.....+..++|+|++.++.     +..                 ++.....+.......+..+.+.|+
T Consensus        74 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~aL  131 (329)
T PTZ00263         74 ELSHPFIVNMMCSFQDENRVYFLLEFVVGGE-----LFT-----------------HLRKAGRFPNDVAKFYHAELVLAF  131 (329)
T ss_pred             hCCCCCCCcEEEEEEcCCEEEEEEcCCCCCh-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4567777777766655566677777766522     111                 222222333333444556777888


Q ss_pred             eeeccCCcccccc-cc---------------cc------------------cccC-CCCCccc-e-EEEec---------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YL------------------VHGT-NLSGVVV-S-AVDFG---------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~~~~~~-s-VwsfG---------  118 (189)
                      .++|..+++|+|+ |+               |+                  |+|. ....++. + |||||         
T Consensus       132 ~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  211 (329)
T PTZ00263        132 EYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG  211 (329)
T ss_pred             HHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcC
Confidence            9999999999886 44               22                  2222 3445788 9 99999         


Q ss_pred             ---CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q psy1684         119 ---SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQWK  171 (189)
Q Consensus       119 ---~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~~  171 (189)
                         |.+.+..++...+..+ +++.|..++.++.+|+.+||+.||++||+     +++|+..
T Consensus       212 ~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        212 YPPFFDDTPFRIYEKILAG-RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             CCCCCCCCHHHHHHHHhcC-CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence               5566667777777766 46678889999999999999999999997     6777643

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.50  E-value=9.7e-15  Score=107.74  Aligned_cols=147  Identities=19%  Similarity=0.338  Sum_probs=97.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a   81 (189)
                      ..+.|+|++++.+.... ...++|+|+... +.    +..                 ++...  ..+.......+..+.+
T Consensus        51 ~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~~~~~~qi~  107 (257)
T cd05040          51 HSLDHENLIRLYGVVLT-HPLMMVTELAPL-GS----LLD-----------------RLRKDALGHFLISTLCDYAVQIA  107 (257)
T ss_pred             hhcCCCCccceeEEEcC-CeEEEEEEecCC-Cc----HHH-----------------HHHhcccccCcHHHHHHHHHHHH
Confidence            34566777766655443 455666666554 21    111                 22211  1233566666677778


Q ss_pred             CCceeeccCCcccccc-cc---------------cc------------------------cccC-CCCCccc-e-EEEec
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YL------------------------VHGT-NLSGVVV-S-AVDFG  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l------------------------~~~~-~~~~~~~-s-VwsfG  118 (189)
                      .|+.++|..+++|+|+ |+               ++                        ++|. ....++. + |||||
T Consensus       108 ~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG  187 (257)
T cd05040         108 NGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFG  187 (257)
T ss_pred             HHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHH
Confidence            8888888888888875 44               11                        1111 2346788 9 99999


Q ss_pred             -------------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -------------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                   |.+.+..++...+. .+..++.|..+|.++.+++.+||+.+|++|||+.+|+..|.
T Consensus       188 ~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         188 VTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence                         33445566666664 56667778889999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.50  E-value=9.4e-15  Score=108.73  Aligned_cols=106  Identities=26%  Similarity=0.428  Sum_probs=82.0

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------CCCC
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSG  109 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~  109 (189)
                      ...+..+..+.+.|+.++|..+++|+|+ |.               +++...                        ....
T Consensus       112 ~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  191 (273)
T cd05074         112 LQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNV  191 (273)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCc
Confidence            5566777788888999999999999986 44               221110                        2234


Q ss_pred             ccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         110 VVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       110 ~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                      ++. + |||||             |.+.+..++...+..+..++.+..++..+.+++.+||+.+|++|||+.+++..|+.
T Consensus       192 ~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         192 YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            577 8 99999             33445566666677777777778899999999999999999999999999999986


Q ss_pred             H
Q psy1684         175 F  175 (189)
Q Consensus       175 ~  175 (189)
                      +
T Consensus       272 ~  272 (273)
T cd05074         272 I  272 (273)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.50  E-value=5.4e-15  Score=111.46  Aligned_cols=160  Identities=17%  Similarity=0.239  Sum_probs=98.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......++|+|++.++. +.-.+..  ......+.       .......+....+.....+.+.|
T Consensus        72 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~--~~~~~~~~-------~~~~~~~~~~~~~~~i~~~i~~a  141 (295)
T cd05097          72 SRLKNPNIIRLLGVCVSDDPLCMITEYMENGD-LNQFLSQ--REIESTFT-------HANNIPSVSIANLLYMAVQIASG  141 (295)
T ss_pred             HhCCCCCcCeEEEEEcCCCccEEEEecCCCCc-HHHHHHh--cccccccc-------ccccCCcccHHHHHHHHHHHHHH
Confidence            35778888888877766677788888877632 1000000  00000000       00001122355556666777778


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |.               +++                       +|. ..+.++. + |||||   
T Consensus       142 l~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l  221 (295)
T cd05097         142 MKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL  221 (295)
T ss_pred             HHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHH
Confidence            88888888888875 43               111                       111 2345788 9 99999   


Q ss_pred             -----------CCCCChHHHHHHHHc-----C--CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEH-----G--YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~-----g--~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                 |...+..+++..+..     +  .....++.+|+.+.+|+.+||+.||++|||+.+|++.|+
T Consensus       222 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         222 WEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence                       334445555544321     1  123446678999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.50  E-value=8.7e-15  Score=111.55  Aligned_cols=141  Identities=12%  Similarity=0.059  Sum_probs=96.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++........|||+|++.++.     +..                 ++.....+...++..+..+.+.|
T Consensus        53 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~l~~~~~~~~~~qi~~~  110 (318)
T cd05582          53 AEVNHPFIVKLHYAFQTEGKLYLILDFLRGGD-----LFT-----------------RLSKEVMFTEEDVKFYLAELALA  110 (318)
T ss_pred             HhCCCCCcccEEEEEEcCCEEEEEEcCCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHH
Confidence            35677888877766655666777777776522     111                 22223334455666677788888


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|...++|+|+ |.               |++.                     |. ....++. + |||||     
T Consensus       111 l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e  190 (318)
T cd05582         111 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE  190 (318)
T ss_pred             HHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeee
Confidence            99999999999886 43               2221                     11 2345788 8 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                             |.+.+..++...+.++ ....|..+++++.+|+.+||+.||++||++.+
T Consensus       191 l~tg~~p~~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         191 MLTGSLPFQGKDRKETMTMILKA-KLGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             eccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                   5555666666666554 34567889999999999999999999999554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.49  E-value=8.7e-15  Score=108.58  Aligned_cols=64  Identities=16%  Similarity=0.164  Sum_probs=51.6

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |.+.+..+.+..+..+.++..|..+|.++.+++.+||+.||++||++.+|++
T Consensus       186 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         186 QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            345778 8 99999            5455555555556666677788899999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.49  E-value=8.5e-15  Score=108.05  Aligned_cols=145  Identities=14%  Similarity=0.194  Sum_probs=93.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+.. ...++|.|+++. +.+    ..                 ++.... .+.....+.+..+.+.
T Consensus        56 ~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~-~~L----~~-----------------~l~~~~~~~~~~~~~~~~~~i~~  112 (259)
T cd05037          56 SQLSHKHLVKLYGVCVR-DENIMVEEYVKF-GPL----DV-----------------FLHREKNNVSLHWKLDVAKQLAS  112 (259)
T ss_pred             HcCCCcchhheeeEEec-CCcEEEEEcCCC-CcH----HH-----------------HHHhhccCCCHHHHHHHHHHHHH
Confidence            45788999988887765 667888888776 311    11                 222122 3345556666777788


Q ss_pred             CceeeccCCcccccc-ccc---------------------------------------ccccC-CC--CCccc-e-EEEe
Q psy1684          83 GLCVNLRKPCVQVSC-RIY---------------------------------------LVHGT-NL--SGVVV-S-AVDF  117 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~---------------------------------------l~~~~-~~--~~~~~-s-Vwsf  117 (189)
                      |+.++|..+++|+|+ |..                                       +++|. ..  ..++. + ||||
T Consensus       113 ~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl  192 (259)
T cd05037         113 ALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSF  192 (259)
T ss_pred             HHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHH
Confidence            888888888888875 441                                       11111 12  25788 8 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      |             +...+..+...........+.|.  ...+.+++.+||..+|++|||+.+|++.|+
T Consensus       193 G~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         193 GTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPD--CAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCC--chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            9             22222223333333333333333  389999999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.49  E-value=5.7e-15  Score=108.91  Aligned_cols=104  Identities=11%  Similarity=0.062  Sum_probs=77.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c---------------------ccccC-CCCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y---------------------LVHGT-NLSG  109 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~---------------------l~~~~-~~~~  109 (189)
                      +....+..+..+.+.|+.++|...++|+|+ |.               +                     ++++. .+..
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  177 (256)
T cd08221          98 FEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVK  177 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCC
Confidence            335556666677778888888888888875 33               1                     11111 2234


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ++. + |||||            |.+.+..+....+..+...+.+..++.++.+++.+||..+|++||+++++++.
T Consensus       178 ~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         178 YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            678 8 99999            55555666777777777677777899999999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.49  E-value=2e-14  Score=107.47  Aligned_cols=108  Identities=24%  Similarity=0.403  Sum_probs=75.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c------------------------ccccC-C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y------------------------LVHGT-N  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~------------------------l~~~~-~  106 (189)
                      +....+..+..+.+.++.++|...++|+|+ |.               +                        ++++. .
T Consensus       106 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  185 (284)
T cd05038         106 INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR  185 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHc
Confidence            335555666667777788888888888775 33               1                        11111 2


Q ss_pred             CCCccc-e-EEEec------CCC------C---------------ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhccc
Q psy1684         107 LSGVVV-S-AVDFG------SGG------M---------------TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLK  157 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------~~~------~---------------~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~  157 (189)
                      ...++. + |||||      +.+      .               ....+...+..+.+.+.|..||.++.+|+.+||+.
T Consensus       186 ~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  265 (284)
T cd05038         186 TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEA  265 (284)
T ss_pred             cCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhcc
Confidence            345788 8 99999      111      0               01223344456667777888999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q psy1684         158 DPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       158 ~p~~RP~~~~i~~~l~~~  175 (189)
                      ||++|||+.+|++.|+.+
T Consensus       266 ~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         266 EPQDRPSFADLILIVDRL  283 (284)
T ss_pred             ChhhCCCHHHHHHHHhhc
Confidence            999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.48  E-value=6.2e-15  Score=109.64  Aligned_cols=147  Identities=16%  Similarity=0.118  Sum_probs=90.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-----CCCcCHhHHHHHhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-----RTTIHYPELVEHYS   78 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-----~~~~~l~~li~~~~   78 (189)
                      ..++|+|++++++.+......++|+|+++++.     +..                 ++..     ........+..+..
T Consensus        50 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~~~~  107 (269)
T cd05087          50 RSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD-----LKG-----------------YLRSCRKAELMTPDPTTLQRMAC  107 (269)
T ss_pred             HhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc-----HHH-----------------HHHHhhhcccccccHHHHHHHHH
Confidence            45778999998887776777889999887632     211                 1100     00111233344555


Q ss_pred             hccCCceeeccCCcccccc-cc---------------c-----------------------ccccCCC--------CCcc
Q psy1684          79 KDADGLCVNLRKPCVQVSC-RI---------------Y-----------------------LVHGTNL--------SGVV  111 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~~~-p~---------------~-----------------------l~~~~~~--------~~~~  111 (189)
                      +.+.++.++|..+++|+|+ |.               +                       +++|...        ..++
T Consensus       108 qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~  187 (269)
T cd05087         108 EIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQT  187 (269)
T ss_pred             HHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCC
Confidence            6666777777777777764 22               1                       1222111        1357


Q ss_pred             c-e-EEEec-------------CCCCChHHHHHHHHcCC--CCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         112 V-S-AVDFG-------------SGGMTNAEVLHQVEHGY--RMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       112 ~-s-VwsfG-------------~~~~~~~~~~~~v~~g~--~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      . + |||||             |+..++.+.......+.  +.+.|   ..++..+.+||..|| .+|++|||+++|+..
T Consensus       188 ~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~  266 (269)
T cd05087         188 KESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLL  266 (269)
T ss_pred             ccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence            7 8 99999             44445555544433332  22222   256789999999999 589999999999988


Q ss_pred             HH
Q psy1684         172 LE  173 (189)
Q Consensus       172 l~  173 (189)
                      |+
T Consensus       267 l~  268 (269)
T cd05087         267 LS  268 (269)
T ss_pred             hc
Confidence            74

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.48  E-value=3e-14  Score=106.40  Aligned_cols=145  Identities=10%  Similarity=0.043  Sum_probs=95.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+......|||+|+++++. +    ..                 ++. ...+....+.....+.+.|
T Consensus        57 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~-~~~~~~~~~~~~~~~i~~~  113 (277)
T cd06642          57 SQCDSPYITRYYGSYLKGTKLWIIMEYLGGGS-A----LD-----------------LLK-PGPLEETYIATILREILKG  113 (277)
T ss_pred             HcCCCCccHhhhcccccCCceEEEEEccCCCc-H----HH-----------------Hhh-cCCCCHHHHHHHHHHHHHH
Confidence            46789999999988877777899999988632 1    11                 111 1112223333344455566


Q ss_pred             ceeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+                                    ++++|. ....++. + |||||     
T Consensus       114 l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e  193 (277)
T cd06642         114 LDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIE  193 (277)
T ss_pred             HHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHH
Confidence            66677666666654 33                                    122222 3345788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             +.+..+..+...+..+..+..+..++.++.+++.+||+.+|++||++.+|++.
T Consensus       194 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         194 LAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                   33344445555555555555667789999999999999999999999999873

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=1.6e-14  Score=108.76  Aligned_cols=145  Identities=8%  Similarity=-0.039  Sum_probs=103.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++........++|+|++.++.     +..                 ++.....+.......+..+.+.|
T Consensus        56 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~qi~~~  113 (291)
T cd05612          56 KEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGE-----LFS-----------------YLRNSGRFSNSTGLFYASEIVCA  113 (291)
T ss_pred             HhCCCCcHhhhHhhhccCCeEEEEEeCCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHH
Confidence            46789999999887766677888999887632     111                 22223334444455566777888


Q ss_pred             ceeeccCCcccccc-cc---------------cc------------------cccC-CCCCccc-e-EEEec--------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +.++|..+++|+|+ |+               |+                  |+|. ....++. + |||||        
T Consensus       114 l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~  193 (291)
T cd05612         114 LEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLV  193 (291)
T ss_pred             HHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence            89999999999886 44               22                  1221 3345788 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQWK  171 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~~  171 (189)
                          |.+.+..++...+..+ .+..|...+..+.+|+.+||+.||.+||+     +.++++.
T Consensus       194 g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         194 GYPPFFDDNPFGIYEKILAG-KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             CCCCCCCCCHHHHHHHHHhC-CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence                6666677777777665 35677788999999999999999999995     7777654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.48  E-value=1.3e-14  Score=107.61  Aligned_cols=154  Identities=14%  Similarity=0.107  Sum_probs=96.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+......++|+++...+.     +..    ....         .......+....+..+..+.+.|+
T Consensus        58 ~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~-----L~~----~~~~---------~~~~~~~~~~~~~~~~~~~i~~~l  119 (267)
T cd08229          58 QLNHPNVIKYYASFIEDNELNIVLELADAGD-----LSR----MIKH---------FKKQKRLIPEKTVWKYFVQLCSAL  119 (267)
T ss_pred             HccCCchhhhhheeEeCCeEEEEEEecCCCC-----HHH----HHHH---------hhccCCCCCHHHHHHHHHHHHHHH
Confidence            4678888888876665566777887766522     111    0000         000012233445555666677777


Q ss_pred             eeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |.                                    ++++|. ....++. + |||||      
T Consensus       120 ~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l  199 (267)
T cd08229         120 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM  199 (267)
T ss_pred             HHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHH
Confidence            7777777777775 33                                    112221 3456788 9 99999      


Q ss_pred             ------CCCCC--hHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         119 ------SGGMT--NAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       119 ------~~~~~--~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                            |.+..  ..++...+..+..++.| ..++.++.+++.+||..||.+|||+.+|++.+.++.
T Consensus       200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         200 AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence                  32222  23444555544434433 468899999999999999999999999999987763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.48  E-value=1.7e-14  Score=106.24  Aligned_cols=146  Identities=25%  Similarity=0.421  Sum_probs=98.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCC--cCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTT--IHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~--~~l~~li~~~~~~a~   82 (189)
                      .+.|+|+++++..+......++|+++.+.+.     +..                 ++.....  +....+..+..+...
T Consensus        57 ~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~-----l~~-----------------~~~~~~~~~~~~~~~~~~~~ql~~  114 (258)
T smart00219       57 KLDHPNIVKLLGVCTEEEPLMIVMEYMEGGD-----LLD-----------------YLRKNRPKELSLSDLLSFALQIAR  114 (258)
T ss_pred             hcCCCchheEEEEEcCCCeeEEEEeccCCCC-----HHH-----------------HHHhhhhccCCHHHHHHHHHHHHH
Confidence            3456666666655554455566666555421     111                 1211111  445556666677777


Q ss_pred             CceeeccCCcccccc-cc---------------c----------------------ccccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y----------------------LVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~----------------------l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      ++.++|..+++|+|+ |.               +                      +++|. ....++. + |||+|   
T Consensus       115 ~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~  194 (258)
T smart00219      115 GMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL  194 (258)
T ss_pred             HHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHH
Confidence            888888888888875 33               1                      11111 2345778 8 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                                |.+.+..++...+..+.+++.|..+|.++.+++.+||..||++|||+.++++.|
T Consensus       195 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      195 WEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence                      444566778888888888888889999999999999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0589|consensus

Probab=99.47  E-value=1e-14  Score=112.62  Aligned_cols=148  Identities=11%  Similarity=0.044  Sum_probs=112.5

Q ss_pred             CCCChHHHHHHhcCCCCCCC-cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHG-AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g-~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      .++.|||||.+.......+. .+||++|+.++...-+..+.              .      +.-|.-..+..+..+...
T Consensus        58 s~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~--------------k------~~~f~E~~i~~~~~Q~~~  117 (426)
T KOG0589|consen   58 SKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQ--------------K------GVLFPEERILKWFVQILL  117 (426)
T ss_pred             HhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHH--------------h------hccccHHHHHHHHHHHHH
Confidence            35778888888876665556 78888888873311111100              0      112335567778888888


Q ss_pred             CceeeccCCcccccccc----------------cccccC----------------------CCCCccc-e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSCRI----------------YLVHGT----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~----------------~l~~~~----------------------~~~~~~~-s-VwsfG----  118 (189)
                      ++.|+|...|+|||+..                |+|+..                      .+.+|+. + +||+|    
T Consensus       118 av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~y  197 (426)
T KOG0589|consen  118 AVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLY  197 (426)
T ss_pred             HHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHH
Confidence            99999999999998654                332222                      6778999 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+-+...++.++.++...|.|.....++..||..|+..+|..||+..+++..
T Consensus       198 Em~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  198 EMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                    78878888888898888888999999999999999999999999999999986

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.47  E-value=1.5e-14  Score=110.47  Aligned_cols=143  Identities=7%  Similarity=-0.070  Sum_probs=93.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++.......+..+||+|++.++.     +..                 ++.....+....+..+..+.+.|+
T Consensus        51 ~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~~L  108 (323)
T cd05571          51 NTRHPFLTALKYSFQTHDRLCFVMEYANGGE-----LFF-----------------HLSRERVFSEDRARFYGAEIVSAL  108 (323)
T ss_pred             hCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            3455565555544444445566666655421     111                 233233444455555667788889


Q ss_pred             eeeccCCcccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++                     +|. ....++. + |||+|      
T Consensus       109 ~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  188 (323)
T cd05571         109 GYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  188 (323)
T ss_pred             HHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhh
Confidence            9999999999986 44               222                     222 3455888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                            |.+.+..++...+..+ ....|...++++.+|+.+||+.||++||     +..++++
T Consensus       189 ltg~~Pf~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         189 MCGRLPFYNQDHEKLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             hcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence                  4455555666655544 3567788999999999999999999999     7888865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.47  E-value=2.3e-14  Score=109.54  Aligned_cols=143  Identities=12%  Similarity=0.009  Sum_probs=99.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++........+||+|++.+ +++    ..                 ++. ...+.......+..+.+.|
T Consensus        57 ~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~-~~L----~~-----------------~~~-~~~l~~~~~~~~~~qi~~a  113 (324)
T cd05589          57 NSERHPFLVNLFACFQTEDHVCFVMEYAAG-GDL----MM-----------------HIH-TDVFSEPRAVFYAACVVLG  113 (324)
T ss_pred             cccCCCChhceeeEEEcCCEEEEEEcCCCC-CcH----HH-----------------Hhh-cCCCCHHHHHHHHHHHHHH
Confidence            456789999988877666778889988876 321    11                 111 1234455556666777778


Q ss_pred             ceeeccCCcccccc-cc---------------cc---------------------cccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+               |+                     ++|. ....++. + |||||     
T Consensus       114 l~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e  193 (324)
T cd05589         114 LQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYE  193 (324)
T ss_pred             HHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHH
Confidence            88888888888875 33               22                     2222 3456788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~  170 (189)
                             |.+.+..++...+..+. +..|..+|+++.+++.+||+.||++||+     +.++++
T Consensus       194 l~~G~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         194 MLVGESPFPGDDEEEVFDSIVNDE-VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence                   66666677777776553 4467789999999999999999999994     555554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.47  E-value=8.9e-15  Score=108.69  Aligned_cols=150  Identities=10%  Similarity=0.063  Sum_probs=91.7

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      +.|+|++++++.+......+||+|+..++.     +..    .+..         .......+....+.....+.+.|+.
T Consensus        66 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----l~~----~l~~---------~~~~~~~~~~~~~~~~~~~l~~~l~  127 (269)
T cd08528          66 LRHPNIVRYYKTFLENDRLYIVMDLIEGAP-----LGE----HFNS---------LKEKKQRFTEERIWNIFVQMVLALR  127 (269)
T ss_pred             CCCCCeeeEEeeEccCCeEEEEEecCCCCc-----HHH----HHHH---------HHhccCCCCHHHHHHHHHHHHHHHH
Confidence            566777777666655566677777666522     111    0000         0001122334445555566677777


Q ss_pred             eecc-CCccccccc-c-----------------------------------cccccC-CCCCccc-e-EEEec-------
Q psy1684          86 VNLR-KPCVQVSCR-I-----------------------------------YLVHGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        86 ~~~~-~~~~~~~~p-~-----------------------------------~l~~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      ++|. .+++|+|+. .                                   +++++. ..+.++. + |||||       
T Consensus       128 ~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~  207 (269)
T cd08528         128 YLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMC  207 (269)
T ss_pred             HhccCCceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHH
Confidence            7774 557777652 2                                   111221 3355788 9 99999       


Q ss_pred             -----CCCCChHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -----SGGMTNAEVLHQVEHGYRMPCPP-GCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -----~~~~~~~~~~~~v~~g~~~~~p~-~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                           |.......+...+..+...+.+. .+++++.++|.+||+.||++||++.++...+.
T Consensus       208 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         208 TLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             hCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence                 33334445555565555444444 67899999999999999999999999998774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.46  E-value=3.8e-14  Score=108.29  Aligned_cols=144  Identities=13%  Similarity=0.044  Sum_probs=96.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......|+|+|+..++. +    ..                 ++.....+.......+..+.+.|
T Consensus        55 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~~~~~~~~~~~~~~~~qi~~~  112 (323)
T cd05584          55 EAVKHPFIVDLIYAFQTGGKLYLILEYLSGGE-L----FM-----------------HLEREGIFMEDTACFYLSEISLA  112 (323)
T ss_pred             HhCCCCchhceeeEEecCCeEEEEEeCCCCch-H----HH-----------------HHHHcCCCCHHHHHHHHHHHHHH
Confidence            35678888887776655566778888776522 1    11                 12212223333334455566778


Q ss_pred             ceeeccCCcccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+               |++                     +|. ....++. + |||||     
T Consensus       113 l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  192 (323)
T cd05584         113 LEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYD  192 (323)
T ss_pred             HHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHH
Confidence            88888888888875 33               222                     222 2344678 8 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                             |.+.+..+....+..+ ..+.|..+++++.+++.+||+.||++||     +..+++.
T Consensus       193 ll~G~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         193 MLTGAPPFTAENRKKTIDKILKG-KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence                   5556666666777665 3567888999999999999999999999     7777765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.46  E-value=3.1e-14  Score=108.47  Aligned_cols=103  Identities=14%  Similarity=0.055  Sum_probs=77.2

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------cC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~  107 (189)
                      ..+.......+..+.+.|+.++|..+++|+|+ |+               |++.                     |. ..
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05592          91 GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG  170 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcC
Confidence            34555555666778888999999999999986 44               2222                     11 34


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-HHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE-TLQ  169 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~-~i~  169 (189)
                      ..++. + |||||            |.+.+..++...+... ++..|..++.++.+++.+||+.||++||++. +++
T Consensus       171 ~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         171 QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            55888 9 99999            6677777777666543 5667888999999999999999999999976 453

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.46  E-value=4.7e-14  Score=109.04  Aligned_cols=142  Identities=11%  Similarity=0.052  Sum_probs=89.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++........++|+|++.+ +.    +..                     ........+..+..+++.|
T Consensus       127 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~----L~~---------------------~~~~~~~~~~~i~~qi~~a  180 (353)
T PLN00034        127 RDVNHPNVVKCHDMFDHNGEIQVLLEFMDG-GS----LEG---------------------THIADEQFLADVARQILSG  180 (353)
T ss_pred             HhCCCCCcceeeeEeccCCeEEEEEecCCC-Cc----ccc---------------------cccCCHHHHHHHHHHHHHH
Confidence            356788888888776666667788888776 31    111                     0011122233444556666


Q ss_pred             ceeeccCCcccccc-cc------------------------------------cccccC-----CCCCc-cc-e-EEEec
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------------------------YLVHGT-----NLSGV-VV-S-AVDFG  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------------------------~l~~~~-----~~~~~-~~-s-VwsfG  118 (189)
                      +.++|..+++|+|+ |.                                    ++++|.     ..+.+ +. + |||||
T Consensus       181 L~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslG  260 (353)
T PLN00034        181 IAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG  260 (353)
T ss_pred             HHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHH
Confidence            77777777777764 32                                    122222     12233 45 8 99999


Q ss_pred             ------------CCCCC---hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ------------SGGMT---NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ------------~~~~~---~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                                  |....   ...+...+..+..+..+..++.++.+||.+||+.||++|||+.||++.
T Consensus       261 vil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        261 VSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                        32211   123334444555666778899999999999999999999999999875

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.45  E-value=2.6e-14  Score=105.68  Aligned_cols=149  Identities=15%  Similarity=0.119  Sum_probs=97.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++........++|+|+++.+. +...+..                 +......+.......+..+.+.|
T Consensus        57 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-l~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~  118 (260)
T cd08222          57 SKLDHPAIVKFHASFLERDAFCIITEYCEGRD-LDCKLEE-----------------LKHTGKTLSENQVCEWFIQLLLG  118 (260)
T ss_pred             HhCCCCcHHHHHHHHhcCCceEEEEEeCCCCC-HHHHHHH-----------------HhhcccccCHHHHHHHHHHHHHH
Confidence            35689999999987777777889999887632 1100000                 00011223344444555556666


Q ss_pred             ceeeccCCcccccc-cc-----------------------------------cccccC-CCCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSC-RI-----------------------------------YLVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~-----------------------------------~l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|+++ |.                                   ++++|. ....++. + |||||      
T Consensus       119 l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l  198 (260)
T cd08222         119 VHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM  198 (260)
T ss_pred             HHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence            66666666666653 22                                   112221 2345778 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            +.+.+..++...+..+..+..|..+|.++.++|.+||..||++||++.++++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         199 CCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence                  4444445555666667777778889999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.45  E-value=4.5e-14  Score=104.07  Aligned_cols=146  Identities=12%  Similarity=0.165  Sum_probs=93.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+......+||.|+.+.+. +    ..                 ++..  ...+....+..+..+.+
T Consensus        54 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~~~~~~~~~~~~~~~~~~~l~  111 (257)
T cd08225          54 AKMKHPNIVTFFASFQENGRLFIVMEYCDGGD-L----MK-----------------RINRQRGVLFSEDQILSWFVQIS  111 (257)
T ss_pred             HhCCCCChhhhhheeccCCeEEEEEecCCCCc-H----HH-----------------HHHhccCCCCCHHHHHHHHHHHH
Confidence            35678999999887777777888998877522 1    11                 0100  01122333444444555


Q ss_pred             CCceeeccCCcccccc-cc-------------------------------------cccccC-CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI-------------------------------------YLVHGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~-------------------------------------~l~~~~-~~~~~~~-s-VwsfG--  118 (189)
                      .++.++|...++|+|+ |.                                     ++++|. ....++. + |||||  
T Consensus       112 ~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i  191 (257)
T cd08225         112 LGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV  191 (257)
T ss_pred             HHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHH
Confidence            5555555555555553 22                                     122222 3456788 9 99999  


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                                |...+..+....+..+...+.++..+.++.+++.+||..+|++|||+.+|++.
T Consensus       192 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         192 LYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                      44444555555555565566677889999999999999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.45  E-value=1.9e-14  Score=106.97  Aligned_cols=151  Identities=18%  Similarity=0.112  Sum_probs=93.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+......+||+|+++. |++.-.+..  .. .             .....+....+..+..+.+.|
T Consensus        50 ~~l~h~nii~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~--~~-~-------------~~~~~~~~~~~~~~~~qi~~~  112 (269)
T cd05042          50 RELNHPNVLQCLGQCIESIPYLLVLEFCPL-GDLKNYLRS--NR-G-------------MVAQMAQKDVLQRMACEVASG  112 (269)
T ss_pred             HhCCCCCcceEEEEECCCCceEEEEEeCCC-CcHHHHHHh--cc-c-------------cccccccHHHHHHHHHHHHHH
Confidence            346788888888877777778888888876 322100000  00 0             000011133344556666777


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC--------CCCCccc-e-E
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT--------NLSGVVV-S-A  114 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~--------~~~~~~~-s-V  114 (189)
                      +.++|..+++|+|+ |.               +++                       +|.        ....++. + |
T Consensus       113 l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di  192 (269)
T cd05042         113 LLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNI  192 (269)
T ss_pred             HHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHH
Confidence            77777777777775 33               222                       111        1234677 8 9


Q ss_pred             EEec-------------CCCCChHHHHHHHHcCCC--CC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         115 VDFG-------------SGGMTNAEVLHQVEHGYR--MP---CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       115 wsfG-------------~~~~~~~~~~~~v~~g~~--~~---~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ||||             |.+..+.+++..+.....  ++   .+..++..+.+++..|| .||++|||+++|++.|
T Consensus       193 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         193 WSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            9999             445555565555433322  22   33468899999999999 5999999999999877

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.44  E-value=2.5e-14  Score=115.20  Aligned_cols=104  Identities=17%  Similarity=0.172  Sum_probs=83.4

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~  107 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               |+++                       |. ..
T Consensus       140 l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  219 (496)
T PTZ00283        140 FREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR  219 (496)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCC
Confidence            444556667778889999999999999996 44               3322                       11 33


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||            |.+.+..+++..+..+...+.|..+|+++.+|+.+||+.||++||++.+++..
T Consensus       220 ~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        220 KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            45888 9 99999            66667778888888887778889999999999999999999999999999763

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.44  E-value=2.6e-14  Score=109.22  Aligned_cols=143  Identities=7%  Similarity=-0.054  Sum_probs=95.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.....+..+||+|++.++. +    ..                 ++.....+.......+..+.+.|+
T Consensus        51 ~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~-L----~~-----------------~l~~~~~~~~~~~~~~~~qi~~aL  108 (323)
T cd05595          51 NTRHPFLTALKYAFQTHDRLCFVMEYANGGE-L----FF-----------------HLSRERVFTEERARFYGAEIVSAL  108 (323)
T ss_pred             hCCCCCCcceeeEEecCCEEEEEEeCCCCCc-H----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4567777776665555556677777776522 1    11                 222223344445555666777888


Q ss_pred             eeeccCCcccccc-cc---------------c---------------------ccccC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------Y---------------------LVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~---------------------l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |                     +|+|. ..+.++. + |||||      
T Consensus       109 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  188 (323)
T cd05595         109 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  188 (323)
T ss_pred             HHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHH
Confidence            8888888888875 43               2                     22222 3456888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                            |.+.+..++...+..+ ....|..+++++.+++.+||..||++||     +..++++
T Consensus       189 l~g~~Pf~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         189 MCGRLPFYNQDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HhCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                  5555556666665443 2456778999999999999999999998     7888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.44  E-value=2.8e-14  Score=106.82  Aligned_cols=104  Identities=12%  Similarity=0.090  Sum_probs=71.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c---------------------ccccC-----
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y---------------------LVHGT-----  105 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~---------------------l~~~~-----  105 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |.               +                     +++|.     
T Consensus       100 l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (282)
T cd06643         100 LTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET  179 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccC
Confidence            334555566667777888888888888875 33               1                     12221     


Q ss_pred             -CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         106 -NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGY--RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       106 -~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~--~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                       ....++. + |||||            |.+.+..+....+..+.  .++.|..+|.++.+++.+||+.||.+||++.++
T Consensus       180 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  259 (282)
T cd06643         180 SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQL  259 (282)
T ss_pred             CCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence             1234788 9 99999            44445555544444332  334567789999999999999999999999998


Q ss_pred             HHH
Q psy1684         169 QWK  171 (189)
Q Consensus       169 ~~~  171 (189)
                      ++.
T Consensus       260 l~~  262 (282)
T cd06643         260 LQH  262 (282)
T ss_pred             hcC
Confidence            753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=3.4e-14  Score=105.10  Aligned_cols=64  Identities=14%  Similarity=0.243  Sum_probs=48.3

Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||+|            |.+.+..+....+ .....+..|..++.++.+++.+||..+|.+|||+.++++.
T Consensus       182 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         182 EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            44778 9 99999            3343333333333 3445566788899999999999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0593|consensus

Probab=99.43  E-value=3.2e-14  Score=104.22  Aligned_cols=145  Identities=12%  Similarity=0.118  Sum_probs=101.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|+|.|+.++......+||.|++.. .     +.+        - +.+..+|       +.-.-+..+..+..+|
T Consensus        56 KqLkH~NLVnLiEVFrrkrklhLVFE~~dh-T-----vL~--------e-Le~~p~G-------~~~~~vk~~l~Q~l~a  113 (396)
T KOG0593|consen   56 KQLKHENLVNLIEVFRRKRKLHLVFEYCDH-T-----VLH--------E-LERYPNG-------VPSELVKKYLYQLLKA  113 (396)
T ss_pred             HhcccchHHHHHHHHHhcceeEEEeeecch-H-----HHH--------H-HHhccCC-------CCHHHHHHHHHHHHHH
Confidence            568899999999988888889999999886 2     222        0 1111121       1122234566788889


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG----  118 (189)
                      +.++|+..|+|||+ ||               |+|+..                       -...|.. . |||.|    
T Consensus       114 i~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~a  193 (396)
T KOG0593|consen  114 IHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFA  193 (396)
T ss_pred             hhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHH
Confidence            99999999999996 77               444333                       2356888 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--------------------CCCCCCCCC----------CCHHHHHHHHHhcccCCC
Q psy1684         119 --------SGGMTNAEVLHQVEH--------------------GYRMPCPPG----------CPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--------------------g~~~~~p~~----------~p~~~~~l~~~C~~~~p~  160 (189)
                              |+|.+.-+-+..|..                    |.++|.|++          ...-+.++|..|++.||+
T Consensus       194 El~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~  273 (396)
T KOG0593|consen  194 ELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPD  273 (396)
T ss_pred             HHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcc
Confidence                    888776544433322                    445555532          334567999999999999


Q ss_pred             CCCCHHHHHH
Q psy1684         161 KRPTFETLQW  170 (189)
Q Consensus       161 ~RP~~~~i~~  170 (189)
                      +|++-++++.
T Consensus       274 ~R~sc~qll~  283 (396)
T KOG0593|consen  274 DRLSCEQLLH  283 (396)
T ss_pred             ccccHHHHhc
Confidence            9999999875

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=1.2e-14  Score=108.58  Aligned_cols=146  Identities=11%  Similarity=0.071  Sum_probs=94.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......|||+|+.+.+. +    ..                 ++.. ...+....+..+..+.+.
T Consensus        57 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~~~~~~l~~~~~~~~~~ql~~  114 (280)
T cd06611          57 SECKHPNIVGLYEAYFYENKLWILIEFCDGGA-L----DS-----------------IMLELERGLTEPQIRYVCRQMLE  114 (280)
T ss_pred             HhCCCCceeEEEEEEecCCeEEEEeeccCCCc-H----HH-----------------HHHHhcCCCCHHHHHHHHHHHHH
Confidence            34566666666665555555666666665521 1    11                 1211 123445556666677777


Q ss_pred             CceeeccCCcccccc-cc------------------------------------cccccC------CCCCccc-e-EEEe
Q psy1684          83 GLCVNLRKPCVQVSC-RI------------------------------------YLVHGT------NLSGVVV-S-AVDF  117 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~------~~~~~~~-s-Vwsf  117 (189)
                      |+.++|...++|+|+ |.                                    ++++|.      ....++. + ||||
T Consensus       115 ~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~sl  194 (280)
T cd06611         115 ALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL  194 (280)
T ss_pred             HHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHH
Confidence            888888888888875 33                                    111111      1244788 9 9999


Q ss_pred             c------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         118 G------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      |            |.+.+..+.+..+..+..+  ..|..++.++.+++.+||+.+|.+||++.++++.
T Consensus       195 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         195 GITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            9            5555556666666666433  3466789999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.43  E-value=3.7e-14  Score=108.08  Aligned_cols=140  Identities=11%  Similarity=0.049  Sum_probs=93.5

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++.....+..|||+|++++ |++    ..                 ++.....+.......+..+.+.|+.+
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~ey~~~-g~L----~~-----------------~l~~~~~~~~~~~~~~~~qi~~al~~  111 (316)
T cd05619          54 EHPFLTHLYCTFQTKENLFFVMEYLNG-GDL----MF-----------------HIQSCHKFDLPRATFYAAEIICGLQF  111 (316)
T ss_pred             CCCcCcceEEEEEeCCEEEEEEeCCCC-CcH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            566666665555445556666666554 211    11                 22222334455556666777888888


Q ss_pred             eccCCcccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+++|+|+ |+               |++                     +|. ....++. + |||||        
T Consensus       112 LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~  191 (316)
T cd05619         112 LHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI  191 (316)
T ss_pred             HHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHh
Confidence            88888888885 33               222                     221 3456888 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-HHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE-TLQ  169 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~-~i~  169 (189)
                          |.+.+..++...+..+. +..|..++.++.+++.+||+.||++||++. ++.
T Consensus       192 G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         192 GQSPFHGHDEEELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             CCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence                66666777777775543 456778899999999999999999999997 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.43  E-value=5.7e-14  Score=107.59  Aligned_cols=144  Identities=7%  Similarity=-0.067  Sum_probs=94.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++.......+..+||+|+++++. +    ..                 ++.....+...+...+..+.+.|+
T Consensus        51 ~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~-L----~~-----------------~l~~~~~l~~~~~~~~~~qi~~aL  108 (328)
T cd05593          51 NTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE-L----FF-----------------HLSRERVFSEDRTRFYGAEIVSAL  108 (328)
T ss_pred             hCCCCCCcceEEEEEcCCEEEEEEeCCCCCC-H----HH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            3455666555544444445566666655421 1    01                 222233344555566667778888


Q ss_pred             eeeccCCcccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++                     +|. ....++. + |||||      
T Consensus       109 ~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el  188 (328)
T cd05593         109 DYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  188 (328)
T ss_pred             HHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHH
Confidence            8999988889886 44               222                     221 3456788 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQWK  171 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~~  171 (189)
                            |.+.+..++...+..+ ....|..+++++.+++.+||..||++||     ++.+|++.
T Consensus       189 ltG~~Pf~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         189 MCGRLPFYNQDHEKLFELILME-DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             hhCCCCCCCCCHHHHHHHhccC-CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence                  5555556666655443 3456788999999999999999999997     88888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.43  E-value=5.1e-14  Score=107.37  Aligned_cols=141  Identities=11%  Similarity=0.001  Sum_probs=93.7

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++.....+..++|+|++.+ +.+    ..                 ++.....+...+...+..+.+.|+.+
T Consensus        54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L----~~-----------------~~~~~~~l~~~~~~~~~~qi~~~l~~  111 (318)
T cd05570          54 KHPFLTQLHSCFQTKDRLFFVMEYVNG-GDL----MF-----------------HIQRSGRFDEPRARFYAAEIVLGLQF  111 (318)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCC-CCH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            466666665554444455666666554 211    01                 22223344455556666777788888


Q ss_pred             eccCCcccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+++|+|+ |+               |++                     +|. ....++. + |||||        
T Consensus       112 LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~  191 (318)
T cd05570         112 LHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA  191 (318)
T ss_pred             HHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence            88888888875 43               222                     111 3456888 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF-----ETLQW  170 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~-----~~i~~  170 (189)
                          |.+.+..++...+..+ .+..|..++.++.+||.+||..||++||++     .++++
T Consensus       192 G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         192 GQSPFEGDDEDELFQSILED-EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             CCCCCCCCCHHHHHHHHHcC-CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence                6666667776666554 345677899999999999999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.43  E-value=5.2e-14  Score=103.78  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=76.8

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSG  109 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~  109 (189)
                      +...++..+..+.+.|+.++|...++|+|+ |+                                    ++++|. ....
T Consensus        99 l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  178 (257)
T cd08223          99 LPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKP  178 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCC
Confidence            345566667777778888888888888875 44                                    111222 2344


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++. + |||||            |.+.+..++...+..+..++.|...++++.+++.+||+.||.+||++.++++
T Consensus       179 ~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         179 YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            678 8 99999            4555556666667777666677889999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.42  E-value=8.8e-14  Score=106.19  Aligned_cols=136  Identities=8%  Similarity=-0.062  Sum_probs=93.2

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|+++++......+..|||+|++.+ +++    ..                 ++.....+.......+..+.+.|+.+
T Consensus        54 ~h~~iv~~~~~~~~~~~~~iv~Ey~~~-g~L----~~-----------------~i~~~~~l~~~~~~~~~~ql~~~L~~  111 (320)
T cd05590          54 NHPFLTQLYCCFQTPDRLFFVMEFVNG-GDL----MF-----------------HIQKSRRFDEARARFYAAEITSALMF  111 (320)
T ss_pred             CCCchhceeeEEEcCCEEEEEEcCCCC-chH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            577777766655555566777777665 311    11                 22223334444455566777788888


Q ss_pred             eccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+++|+|+ |+               |++.                     |. ....++. + |||||        
T Consensus       112 lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  191 (320)
T cd05590         112 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC  191 (320)
T ss_pred             HHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhh
Confidence            88888888886 44               2222                     11 3455788 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                          |.+.+..++...+..+. ...|..++.++.+++.+|++.||++||+.
T Consensus       192 g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         192 GHAPFEAENEDDLFEAILNDE-VVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence                66667777777776553 45677899999999999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0615|consensus

Probab=99.42  E-value=3e-14  Score=107.99  Aligned_cols=145  Identities=8%  Similarity=-0.020  Sum_probs=97.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .+++|||+|++......++-.|+|.|++.+|..|.-.+..                +++...    ..  -.+..|...+
T Consensus       231 kkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~n----------------k~l~ed----~~--K~~f~Qll~a  288 (475)
T KOG0615|consen  231 KKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVAN----------------KYLRED----LG--KLLFKQLLTA  288 (475)
T ss_pred             HhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhc----------------cccccc----hh--HHHHHHHHHH
Confidence            4789999999998888888889999999984322111111                111110    11  1234455678


Q ss_pred             ceeeccCCcccccc-cc------------------cccc--------------------cC---CCCC-ccc-e-EEEec
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------YLVH--------------------GT---NLSG-VVV-S-AVDFG  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------~l~~--------------------~~---~~~~-~~~-s-VwsfG  118 (189)
                      +.|+|..+|+|||+ |+                  |||+                    |.   .+-. +.. . +||.|
T Consensus       289 vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlG  368 (475)
T KOG0615|consen  289 VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLG  368 (475)
T ss_pred             HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeecc
Confidence            88999999999996 66                  3333                    22   2222 344 6 99999


Q ss_pred             ------------CCCCCh-HHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------------SGGMTN-AEVLHQVEHGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------------~~~~~~-~~~~~~v~~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                  |.+-.. ..+.++|.+|.-..-|   .....+..+||.+.+..||+.|||..|.++
T Consensus       369 cvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  369 CVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence                        333222 2377788888544333   357889999999999999999999999876

>KOG0580|consensus

Probab=99.42  E-value=1.3e-13  Score=97.79  Aligned_cols=147  Identities=11%  Similarity=0.072  Sum_probs=108.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|||+.++++....+.-.||+.|+.+.+..|.. +..              .     ....|.-..-..|..+.|.+
T Consensus        77 s~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~-L~~--------------~-----~~~~f~e~~~a~Yi~q~A~A  136 (281)
T KOG0580|consen   77 SHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKD-LQE--------------G-----RMKRFDEQRAATYIKQLANA  136 (281)
T ss_pred             cccCCccHHhhhhheeccceeEEEEEecCCchHHHH-HHh--------------c-----ccccccccchhHHHHHHHHH
Confidence            578999999999998888899999999988442211 000              0     11233322234466677889


Q ss_pred             ceeeccCCcccccc-ccccc----------------------------------ccC-CCCCccc-e-EEEec-------
Q psy1684          84 LCVNLRKPCVQVSC-RIYLV----------------------------------HGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~l~----------------------------------~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      +.|+|.+.++|||+ |+.+-                                  +|. .+..++. . +|+.|       
T Consensus       137 l~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yefl  216 (281)
T KOG0580|consen  137 LLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFL  216 (281)
T ss_pred             HHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHH
Confidence            99999999999996 66221                                  111 5666888 8 99999       


Q ss_pred             -----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                           |+..+..+..+.|.+- +...|+..+.+..++|.+|+..+|.+|.+-.|++..
T Consensus       217 vg~ppFes~~~~etYkrI~k~-~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  217 VGLPPFESQSHSETYKRIRKV-DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             hcCCchhhhhhHHHHHHHHHc-cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence                 6666667777777543 466789999999999999999999999999998764

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.41  E-value=3.6e-14  Score=108.78  Aligned_cols=30  Identities=20%  Similarity=0.474  Sum_probs=27.6

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++++.+||.+||..||++|||+.+|++.
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            467899999999999999999999999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.41  E-value=6.6e-14  Score=107.76  Aligned_cols=144  Identities=8%  Similarity=-0.146  Sum_probs=99.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+......|||+|++..+.     +..                 ++.....+.......+..+.+.|+
T Consensus        87 ~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~-----L~~-----------------~i~~~~~~~~~~~~~~~~qi~~aL  144 (340)
T PTZ00426         87 YINHPFCVNLYGSFKDESYLYLVLEFVIGGE-----FFT-----------------FLRRNKRFPNDVGCFYAAQIVLIF  144 (340)
T ss_pred             hCCCCCCcceEEEEEeCCEEEEEEeCCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4667888887776655556677888776522     111                 232233444444555667777888


Q ss_pred             eeeccCCcccccc-cc---------------cc------------------cccC-CCCCccc-e-EEEec---------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YL------------------VHGT-NLSGVVV-S-AVDFG---------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~~~~~~-s-VwsfG---------  118 (189)
                      .++|..+++|+|+ |+               |+                  |+|. ....++. + |||||         
T Consensus       145 ~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G  224 (340)
T PTZ00426        145 EYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG  224 (340)
T ss_pred             HHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcC
Confidence            8899989999886 44               22                  2222 3345788 9 99999         


Q ss_pred             ---CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q psy1684         119 ---SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQWK  171 (189)
Q Consensus       119 ---~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~~  171 (189)
                         |.+.+...+...+..+. ...|...++++.++|.+|++.||++|+     +++++++.
T Consensus       225 ~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        225 CPPFYANEPLLIYQKILEGI-IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             CCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence               55666666677776664 446778899999999999999999995     88888764

>KOG0583|consensus

Probab=99.41  E-value=4.3e-14  Score=109.44  Aligned_cols=148  Identities=11%  Similarity=0.147  Sum_probs=104.5

Q ss_pred             CCC-hHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           5 KIK-RIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~-~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .+. |+|+++++.+.......|+|+|+..+ |++    ..                 |+.....+.-.+...++.|..+|
T Consensus        75 ~~~~HpnI~~l~ev~~t~~~~~ivmEy~~g-GdL----~~-----------------~i~~~g~l~E~~ar~~F~Qlisa  132 (370)
T KOG0583|consen   75 RLRSHPNIIRLLEVFATPTKIYIVMEYCSG-GDL----FD-----------------YIVNKGRLKEDEARKYFRQLISA  132 (370)
T ss_pred             HhccCCCEeEEEEEEecCCeEEEEEEecCC-ccH----HH-----------------HHHHcCCCChHHHHHHHHHHHHH
Confidence            344 67777766665556667777777665 311    11                 33333344445566678888999


Q ss_pred             ceeeccCCcccccc-cc----------------cccc---------------------cC-CCCC-ccc--e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI----------------YLVH---------------------GT-NLSG-VVV--S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~----------------~l~~---------------------~~-~~~~-~~~--s-VwsfG--  118 (189)
                      +.|+|..+|+|||+ |+                |++.                     |. .... |+.  + |||+|  
T Consensus       133 v~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GVi  212 (370)
T KOG0583|consen  133 VAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVI  212 (370)
T ss_pred             HHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHH
Confidence            99999999999995 66                2221                     11 4445 875  7 99999  


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGC-PPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~-p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                |.+.+...+...+.+| +..+|..+ ++++..|+.+|+..||.+|+|..+|+  ....++
T Consensus       213 Ly~ml~G~~PF~d~~~~~l~~ki~~~-~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~--~h~w~~  279 (370)
T KOG0583|consen  213 LYVLLCGRLPFDDSNVPNLYRKIRKG-EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL--EHPWFQ  279 (370)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhcC-CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh--hChhhc
Confidence                      6776666777777666 46678888 99999999999999999999999998  334444

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.41  E-value=3e-14  Score=106.46  Aligned_cols=101  Identities=15%  Similarity=0.139  Sum_probs=71.9

Q ss_pred             hHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCCccc
Q psy1684          71 PELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV  112 (189)
Q Consensus        71 ~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~  112 (189)
                      .++..+..+.+.++.++|..+++|+|+ |.                                    ++++|. ....++.
T Consensus       101 ~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  180 (277)
T cd06640         101 FQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS  180 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCcc
Confidence            334444555666777777777777764 32                                    122222 3455788


Q ss_pred             -e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         113 -S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       113 -s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                       + |||||            +.+.++..+...+..+..+..+..+|.++.+++.+||..+|++||++.+++..
T Consensus       181 ~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         181 KADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence             9 99999            55556666666666666666677899999999999999999999999999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0577|consensus

Probab=99.41  E-value=1.3e-14  Score=114.75  Aligned_cols=148  Identities=12%  Similarity=0.105  Sum_probs=109.4

Q ss_pred             CCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhcc
Q psy1684           2 YFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         2 ~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a   81 (189)
                      |...+.|||.+.+-||-..+.-.|||+||+-+.-      .+    .+           -++ ++.+.-.++........
T Consensus        79 FL~~l~HPntieYkgCyLre~TaWLVMEYClGSA------sD----ll-----------eVh-kKplqEvEIAAi~~gaL  136 (948)
T KOG0577|consen   79 FLRQLRHPNTIEYKGCYLREHTAWLVMEYCLGSA------SD----LL-----------EVH-KKPLQEVEIAAITHGAL  136 (948)
T ss_pred             HHHhccCCCcccccceeeccchHHHHHHHHhccH------HH----HH-----------HHH-hccchHHHHHHHHHHHH
Confidence            4567899999999888888888999999887521      11    00           011 11222233444455666


Q ss_pred             CCceeeccCCcccccccc---------------------------------cccccC----CCCCccc-e-EEEec----
Q psy1684          82 DGLCVNLRKPCVQVSCRI---------------------------------YLVHGT----NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~---------------------------------~l~~~~----~~~~~~~-s-VwsfG----  118 (189)
                      +|++|+|+..-||||+..                                 |||+++    ..+.|+- + |||+|    
T Consensus       137 ~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCI  216 (948)
T KOG0577|consen  137 QGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  216 (948)
T ss_pred             HHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhh
Confidence            788888888888887655                                 777776    6788999 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              +.+++....+.-|.....|..+ ++++..+..++..|++.-|.+|||..++++.
T Consensus       217 ELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  217 ELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             hhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence                    6778888888888766666554 4688899999999999999999999988764

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.41  E-value=1.4e-13  Score=105.12  Aligned_cols=103  Identities=11%  Similarity=-0.021  Sum_probs=76.1

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLS  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~  108 (189)
                      .+.......+..+.+.|+.++|..+++|+|+ |+               |++                     +|. ...
T Consensus        92 ~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (321)
T cd05591          92 KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQEL  171 (321)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCC
Confidence            3444555556677788899999999999986 44               222                     111 345


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-------CHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-------TFET  167 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-------~~~~  167 (189)
                      .++. + |||||            |.+.+..++...+..+. ...|..++.++.+|+.+|++.||++||       +..+
T Consensus       172 ~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~  250 (321)
T cd05591         172 EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD-VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDA  250 (321)
T ss_pred             CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHH
Confidence            6888 9 99999            66667777777776654 446678899999999999999999999       6666


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      +++
T Consensus       251 ~~~  253 (321)
T cd05591         251 IKQ  253 (321)
T ss_pred             Hhc
Confidence            654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0201|consensus

Probab=99.40  E-value=1.2e-14  Score=110.65  Aligned_cols=166  Identities=13%  Similarity=0.090  Sum_probs=102.4

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEeccCC--ccCCCCCcC--HhHH---HH--
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRSLFET--QKAGRTTIH--YPEL---VE--   75 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~~~~g--yl~~~~~~~--l~~l---i~--   75 (189)
                      ..++|+-++++.-....-.+|++|++..+....+.-... .....-++.+.....|  |+|..+.+|  +...   +.  
T Consensus        68 ~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~  147 (467)
T KOG0201|consen   68 CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES  147 (467)
T ss_pred             cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc
Confidence            445677777776655566778899988743222211110 0122233333334444  777776665  3221   10  


Q ss_pred             HhhhccC-CceeeccCCccccc----ccccccccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCC
Q psy1684          76 HYSKDAD-GLCVNLRKPCVQVS----CRIYLVHGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGY  135 (189)
Q Consensus        76 ~~~~~a~-gl~~~~~~~~~~~~----~p~~l~~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~  135 (189)
                      ...+.++ |.+..+......|+    .|.|||+|+ ....|+. + |||+|            +.++++..++..|-+..
T Consensus       148 g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~  227 (467)
T KOG0201|consen  148 GDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA  227 (467)
T ss_pred             CcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC
Confidence            1111222 44444433333332    355888888 4447999 9 99999            77788877776665554


Q ss_pred             CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         136 RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       136 ~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .|.....+.+.++++|..|+..||+.||+++++++.
T Consensus       228 PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  228 PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            444445788999999999999999999999999874

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.40  E-value=7.8e-14  Score=106.58  Aligned_cols=100  Identities=12%  Similarity=-0.064  Sum_probs=72.3

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~  107 (189)
                      ..+.......+..+.+.|+.++|..+++|+|+ |.               |++                     +|. ..
T Consensus        91 ~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (323)
T cd05575          91 RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK  170 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcC
Confidence            34444445556677888899999999999886 43               222                     221 34


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                      ..++. + |||||            |.+.+..++...+..+. ...++..+.++.+++.+|++.||++||+..
T Consensus       171 ~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         171 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP-LRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            56888 9 99999            55556667777765553 345667899999999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.40  E-value=5.2e-14  Score=105.72  Aligned_cols=103  Identities=15%  Similarity=0.085  Sum_probs=72.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~  110 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               |++                    +|. ....+
T Consensus       107 ~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (290)
T cd07862         107 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY  186 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCC
Confidence            345566677788889999999999999986 44               221                    111 24567


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCC--------------------------CCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCP--------------------------PGCPPRLYDI  150 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p--------------------------~~~p~~~~~l  150 (189)
                      +. + |||||            |.+.+..+.+..+.++...+.|                          +.++..+.+|
T Consensus       187 ~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  266 (290)
T cd07862         187 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL  266 (290)
T ss_pred             CCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHH
Confidence            88 9 99999            5555555555555332211111                          2467788999


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.+|++.||++|||+.++++
T Consensus       267 i~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         267 LLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHHhccCchhcCCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.40  E-value=9.6e-14  Score=105.81  Aligned_cols=103  Identities=13%  Similarity=0.036  Sum_probs=76.3

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------cC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~  107 (189)
                      ..+.......+..+.+.|+.++|..+++|+|+ |+               |++.                     |. ..
T Consensus        91 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05620          91 GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG  170 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcC
Confidence            34445556666778888999999999999986 44               2222                     11 34


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-HHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE-TLQ  169 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~-~i~  169 (189)
                      ..++. + |||+|            |.+.+..++...+..+ .+..|..++.++.+++.+||+.||++||++. ++.
T Consensus       171 ~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         171 LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            56888 9 99999            5566666777666544 3556778999999999999999999999985 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0033|consensus

Probab=99.40  E-value=2.6e-14  Score=102.00  Aligned_cols=97  Identities=14%  Similarity=0.093  Sum_probs=76.5

Q ss_pred             HHHhhhccCCceeeccCCcccccc-cc------------------cccccC---------------------CCCCccc-
Q psy1684          74 VEHYSKDADGLCVNLRKPCVQVSC-RI------------------YLVHGT---------------------NLSGVVV-  112 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~~~~~-p~------------------~l~~~~---------------------~~~~~~~-  112 (189)
                      ..+.+|+.+++.|+|..+|+|||. |+                  |+|.+.                     +..+|+. 
T Consensus       113 SH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kp  192 (355)
T KOG0033|consen  113 SHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKP  192 (355)
T ss_pred             HHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCc
Confidence            335566778899999999999995 66                  333332                     6678999 


Q ss_pred             e-EEEec------------CCCCChHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         113 S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       113 s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      + ||+.|            |-|.+...+.+.|..| +-.+.|  ++..++.++|+.+++..||++|-|..|.++
T Consensus       193 vDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  193 VDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             chhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            9 99999            6666778899999776 444443  467899999999999999999999998765

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.40  E-value=1.4e-13  Score=101.41  Aligned_cols=144  Identities=14%  Similarity=0.116  Sum_probs=92.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++.+.+......++|+|+.++ +.    +..                 ++.....+.......+..+.+.|+
T Consensus        58 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~~~~~~~~~~~~~~~~~~~i~~~l  115 (258)
T cd06632          58 KLQHPNIVQYLGTEREEDNLYIFLELVPG-GS----LAK-----------------LLKKYGSFPEPVIRLYTRQILLGL  115 (258)
T ss_pred             hcCCCCchheeeeEecCCeEEEEEEecCC-Cc----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45677777777666555666777776654 21    111                 222222334445555666777788


Q ss_pred             eeeccCCcccccc-cc---------------c--------------------ccccC-CCCC-ccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------Y--------------------LVHGT-NLSG-VVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~--------------------l~~~~-~~~~-~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |.               +                    ++++. .... ++. + |||||      
T Consensus       116 ~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l  195 (258)
T cd06632         116 EYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEM  195 (258)
T ss_pred             HHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHH
Confidence            8888888888775 33               1                    11111 2223 788 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~-g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            |......+....+.. +..+..|..+++++.+++.+||+.||++||++.+++.
T Consensus       196 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         196 ATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence                  333443343334433 4556677889999999999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1.6e-13  Score=105.27  Aligned_cols=144  Identities=10%  Similarity=-0.028  Sum_probs=91.1

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      +.|+|++++++.+...+..|||+|++.++.     +..                 ++.....+.......+..+.+.|+.
T Consensus        58 ~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~-----L~~-----------------~l~~~~~l~~~~~~~~~~qi~~~l~  115 (333)
T cd05600          58 TKSEWLVKLLYAFQDDEYLYLAMEYVPGGD-----FRT-----------------LLNNLGVLSEDHARFYMAEMFEAVD  115 (333)
T ss_pred             CCCCCCccEEEEEEcCCEEEEEEeCCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            446666666555544455566666655421     111                 2322333444445555667777888


Q ss_pred             eeccCCcccccc-cc---------------cc------------------cccC-CCCCccc-e-EEEec----------
Q psy1684          86 VNLRKPCVQVSC-RI---------------YL------------------VHGT-NLSGVVV-S-AVDFG----------  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~~~~~~-s-VwsfG----------  118 (189)
                      ++|...++|+|+ |+               |+                  ++|. ....++. + |||||          
T Consensus       116 ~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~  195 (333)
T cd05600         116 ALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGF  195 (333)
T ss_pred             HHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCC
Confidence            888888888885 44               22                  2222 3456888 9 99999          


Q ss_pred             --CCCCChHHHHHHHHcCC-CCCCCC------CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --SGGMTNAEVLHQVEHGY-RMPCPP------GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --~~~~~~~~~~~~v~~g~-~~~~p~------~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                        |.+.+..++...+.... .+..|.      .++.++.+|+.+||..+|.+||++.++++.
T Consensus       196 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         196 PPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             CCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence              55556666666654321 122222      468999999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.39  E-value=8.3e-14  Score=104.47  Aligned_cols=145  Identities=12%  Similarity=0.009  Sum_probs=91.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+...+..+||+|++.. +.+..                     +......+....+..+..+.+.|
T Consensus        55 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~l~~---------------------~~~~~~~~~~~~~~~~~~qi~~~  112 (287)
T cd07848          55 RTLKQENIVELKEAFRRRGKLYLVFEYVEK-NMLEL---------------------LEEMPNGVPPEKVRSYIYQLIKA  112 (287)
T ss_pred             HhCCCccccchhhhEecCCEEEEEEecCCC-CHHHH---------------------HHhcCCCCCHHHHHHHHHHHHHH
Confidence            457789999988877777778899998875 32110                     00001123344455566677778


Q ss_pred             ceeeccCCcccccc-cc---------------cc----------------------cccC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL----------------------VHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               |+                      ++|. ....++. + |||||    
T Consensus       113 L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~  192 (287)
T cd07848         113 IHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILG  192 (287)
T ss_pred             HHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHH
Confidence            88888888888775 33               22                      2221 3456888 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--C------------------CCCCC-----------CCCCCHHHHHHHHHhcccCC
Q psy1684         119 --------SGGMTNAEVLHQVEH--G------------------YRMPC-----------PPGCPPRLYDIMLECWLKDP  159 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--g------------------~~~~~-----------p~~~p~~~~~l~~~C~~~~p  159 (189)
                              |++.+..+....+..  |                  ...+.           ...++.++.+|+.+|++.||
T Consensus       193 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P  272 (287)
T cd07848         193 ELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNP  272 (287)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCc
Confidence                    555544333322211  0                  00000           11367889999999999999


Q ss_pred             CCCCCHHHHHH
Q psy1684         160 VKRPTFETLQW  170 (189)
Q Consensus       160 ~~RP~~~~i~~  170 (189)
                      ++|||++++++
T Consensus       273 ~~R~s~~~~l~  283 (287)
T cd07848         273 TDRYLTEQCLN  283 (287)
T ss_pred             ccCCCHHHHhc
Confidence            99999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.39  E-value=4.6e-14  Score=107.98  Aligned_cols=28  Identities=25%  Similarity=0.488  Sum_probs=25.8

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +++++.+++.+||+.||++|||++++++
T Consensus       279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         279 FSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             cCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence            4678999999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.39  E-value=1.2e-13  Score=105.56  Aligned_cols=105  Identities=10%  Similarity=-0.033  Sum_probs=76.5

Q ss_pred             CCcCHhHHHHHhhhccCCceeecc-CCcccccc-cc---------------cccc---------------------cC-C
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLR-KPCVQVSC-RI---------------YLVH---------------------GT-N  106 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~-~~~~~~~~-p~---------------~l~~---------------------~~-~  106 (189)
                      ..+.......+..+.+.|+.++|. .+++|+|+ |+               |++.                     |. .
T Consensus        90 ~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  169 (325)
T cd05594          90 RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE  169 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHc
Confidence            344455566667788889999997 78999986 54               2222                     11 3


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFET  167 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~  167 (189)
                      ...++. + |||||            |.+.+..++...+..+ ....|...++++.+|+.+||+.||++|+     ++++
T Consensus       170 ~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~  248 (325)
T cd05594         170 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKE  248 (325)
T ss_pred             cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHH
Confidence            456888 9 99999            4555556666655443 3556788999999999999999999996     8888


Q ss_pred             HHHH
Q psy1684         168 LQWK  171 (189)
Q Consensus       168 i~~~  171 (189)
                      +++.
T Consensus       249 il~h  252 (325)
T cd05594         249 IMQH  252 (325)
T ss_pred             HhcC
Confidence            8753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1e-13  Score=103.26  Aligned_cols=102  Identities=15%  Similarity=0.114  Sum_probs=71.6

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCCc
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGV  110 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~  110 (189)
                      ....+.....+.+.++.++|...++|+|+ |.                                    ++++|. ....+
T Consensus        96 ~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  175 (274)
T cd06609          96 DETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGY  175 (274)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCC
Confidence            34445555566666777777777777764 22                                    122222 33447


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPG-CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~-~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +. + |||||            |.+.++.++...+..+..+..+.. +|.++.+++.+||..||++|||++++++
T Consensus       176 ~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         176 DEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            88 9 99999            445555566666666665555555 8999999999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.39  E-value=2.5e-13  Score=100.31  Aligned_cols=143  Identities=12%  Similarity=0.069  Sum_probs=92.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++..........|+|+++..+ +.    +..                 ++.....+....+..+..+.+.|
T Consensus        55 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~l~~~~~~~~~~~i~~~  112 (258)
T cd05578          55 QELNHPFLVNLWYSFQDEENMYLVVDLLLG-GD----LRY-----------------HLSQKVKFSEEQVKFWICEIVLA  112 (258)
T ss_pred             HhCCCCChHHHHHhhcCCCeEEEEEeCCCC-CC----HHH-----------------HHHhcCCcCHHHHHHHHHHHHHH
Confidence            357899999988877777778999998776 31    111                 12112123334444555566667


Q ss_pred             ceeeccCCccccccc-c-----------------------------------cccccC-CCCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSCR-I-----------------------------------YLVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~p-~-----------------------------------~l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|+|+. .                                   ++++|. ....++. + |||||      
T Consensus       113 l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  192 (258)
T cd05578         113 LEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYEC  192 (258)
T ss_pred             HHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHH
Confidence            777777777777643 2                                   122222 3344688 9 99999      


Q ss_pred             ------CCCCC---hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH--HHHH
Q psy1684         119 ------SGGMT---NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF--ETLQ  169 (189)
Q Consensus       119 ------~~~~~---~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~--~~i~  169 (189)
                            |...+   ..++... ....+...|..+|.++.+++.+||..||.+||++  ++++
T Consensus       193 ~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         193 LRGKRPYRGHSRTIRDQIRAK-QETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HhCCCCCCCCCccHHHHHHHH-hccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                  44433   2333332 2224566778899999999999999999999999  5544

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.38  E-value=9.5e-14  Score=106.58  Aligned_cols=29  Identities=21%  Similarity=0.474  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+.++.+|+.+||+.||++|||+.+++..
T Consensus       271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         271 FGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             cCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence            56889999999999999999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.38  E-value=1e-13  Score=102.38  Aligned_cols=103  Identities=15%  Similarity=0.067  Sum_probs=76.6

Q ss_pred             cCHhHHHHHhhhccCCceeec-----cCCcccccc-cc---------------c---------------------ccccC
Q psy1684          68 IHYPELVEHYSKDADGLCVNL-----RKPCVQVSC-RI---------------Y---------------------LVHGT  105 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~-----~~~~~~~~~-p~---------------~---------------------l~~~~  105 (189)
                      ++......+..+.+.|+.++|     ...++|+|+ |.               +                     +++|.
T Consensus       102 l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~  181 (265)
T cd08217         102 IEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQ  181 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhh
Confidence            345556666677777888888     777888775 33               1                     11111


Q ss_pred             -CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 -NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 -~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                       ....++. + |||||            |.+.+..++...+..+..+..|...+.++.+++.+||+.+|++||++.+|++
T Consensus       182 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         182 LNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             hcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence             2344678 8 99999            5555566777777777777788889999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.38  E-value=3.1e-13  Score=100.09  Aligned_cols=145  Identities=17%  Similarity=0.078  Sum_probs=92.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .+.|+|++++++.+......+||+++.....     +..                 ++... ..+....+.....+.+.+
T Consensus        55 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~l~~~  112 (265)
T cd06605          55 KCNSPYIVGFYGAFYNNGDISICMEYMDGGS-----LDK-----------------ILKEVQGRIPERILGKIAVAVLKG  112 (265)
T ss_pred             HCCCCchhhhheeeecCCEEEEEEEecCCCc-----HHH-----------------HHHHccCCCCHHHHHHHHHHHHHH
Confidence            4568888888877666667778888776421     111                 11111 223334444455566677


Q ss_pred             ceeecc-CCcccccc-cc----------------------------------cccccC-CCCCccc-e-EEEec------
Q psy1684          84 LCVNLR-KPCVQVSC-RI----------------------------------YLVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~-~~~~~~~~-p~----------------------------------~l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      +.++|. .+++|+|+ |.                                  ++++|. ....++. + |||||      
T Consensus       113 l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l  192 (265)
T cd06605         113 LTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIEL  192 (265)
T ss_pred             HHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            777777 77777765 22                                  122222 3456888 9 99999      


Q ss_pred             ------CCCC-----ChHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ------SGGM-----TNAEVLHQVEHGYRMPCPPG-CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ------~~~~-----~~~~~~~~v~~g~~~~~p~~-~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            |...     ...+....+..+..+..|.. ++.++.++|.+||..||++|||+.+++..
T Consensus       193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         193 ATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence                  2222     22344444555555555655 88999999999999999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.38  E-value=4.5e-14  Score=107.06  Aligned_cols=103  Identities=13%  Similarity=0.084  Sum_probs=70.7

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc--------------------------------cccccC----CCCCcc
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------YLVHGT----NLSGVV  111 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------~l~~~~----~~~~~~  111 (189)
                      ....+..+..+.+.|+.++|...++|+|+ |.                                ++++|.    ..+.++
T Consensus       113 ~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  192 (307)
T cd06607         113 QEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYD  192 (307)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCC
Confidence            34555566667777888888888888875 33                                233332    135588


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPC-PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~-p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      . + |||||            |.+.+.......+..+..+.. +..++.++.+++.+||+.||++||++.+|+..
T Consensus       193 ~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         193 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             cccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            8 9 99999            334444444444444433333 34688999999999999999999999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.38  E-value=2.3e-13  Score=102.53  Aligned_cols=145  Identities=6%  Similarity=-0.061  Sum_probs=97.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..|+|+|+++++.     +..                 ++. ...+...+...+..+...|
T Consensus        74 ~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~-~~~l~~~~~~~~~~qi~~~  130 (292)
T cd06658          74 RDYHHENVVDMYNSYLVGDELWVVMEFLEGGA-----LTD-----------------IVT-HTRMNEEQIATVCLSVLRA  130 (292)
T ss_pred             HhCCCCcHHHHHHheecCCeEEEEEeCCCCCc-----HHH-----------------HHh-cCCCCHHHHHHHHHHHHHH
Confidence            45789999999988777778899999887622     111                 111 1123345556666777778


Q ss_pred             ceeeccCCcccccc-cc---------------cc---------------------cccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |.               ++                     ++|. ....++. + |||||     
T Consensus       131 l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~e  210 (292)
T cd06658         131 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE  210 (292)
T ss_pred             HHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence            88888888888875 33               11                     1111 2235788 8 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+.+..+....+.......  .+...+..+.+++.+||..||++|||++++++.
T Consensus       211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         211 MIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                   44555555555554443222  223578899999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.38  E-value=2.8e-13  Score=100.26  Aligned_cols=144  Identities=8%  Similarity=-0.018  Sum_probs=88.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++........++|+|+..+ +.    +..                 ++.....+....+..+..+.+.|+
T Consensus        49 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~l~~~~~~~~~~~i~~~l  106 (262)
T cd05572          49 ECNHPFIVKLYRTFKDKKYIYMLMEYCLG-GE----LWT-----------------ILRDRGLFDEYTARFYIACVVLAF  106 (262)
T ss_pred             hCCCCCEeeeeeeEEcCCccEEEEecCCC-Cc----HHH-----------------HHhhcCCCCHHHHHHHHHHHHHHH
Confidence            45677777766655555556677776654 21    111                 222222233333444445556666


Q ss_pred             eeeccCCcccccc-cc-----------------------------------cccccC-CCCCccc-e-EEEec-------
Q psy1684          85 CVNLRKPCVQVSC-RI-----------------------------------YLVHGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~-----------------------------------~l~~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      .++|...++|+|+ |.                                   ++++|. ....++. + |||||       
T Consensus       107 ~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~  186 (262)
T cd05572         107 EYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL  186 (262)
T ss_pred             HHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence            6666666666654 22                                   122222 3345788 9 99999       


Q ss_pred             -----CCCCC--hHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q psy1684         119 -----SGGMT--NAEVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQW  170 (189)
Q Consensus       119 -----~~~~~--~~~~~~~v~~-g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~  170 (189)
                           |.+..  ..++...+.. ...++.|..++.++.++|.+||+.||++||+     ++|+++
T Consensus       187 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         187 TGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             hCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence                 33333  4555666554 4566778888999999999999999999999     676665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.38  E-value=3.3e-13  Score=99.82  Aligned_cols=145  Identities=16%  Similarity=0.148  Sum_probs=89.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+...+..++|+|+...+.     +..                 ++.....+.......+..+.+.|
T Consensus        54 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~i~~~i~~~  111 (264)
T cd06626          54 ELLKHPNLVKYYGVEVHREKVYIFMEYCSGGT-----LEE-----------------LLEHGRILDEHVIRVYTLQLLEG  111 (264)
T ss_pred             HhCCCCChhheeeeEecCCEEEEEEecCCCCc-----HHH-----------------HHhhcCCCChHHHHHHHHHHHHH
Confidence            35678888888877666667788888776522     111                 11111122233334444555666


Q ss_pred             ceeeccCCccccccc-c----------------------------------------cccccC-CCC---Cccc-e-EEE
Q psy1684          84 LCVNLRKPCVQVSCR-I----------------------------------------YLVHGT-NLS---GVVV-S-AVD  116 (189)
Q Consensus        84 l~~~~~~~~~~~~~p-~----------------------------------------~l~~~~-~~~---~~~~-s-Vws  116 (189)
                      +.++|...++|+|+. .                                        ++++|. ...   .++. + |||
T Consensus       112 l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s  191 (264)
T cd06626         112 LAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWS  191 (264)
T ss_pred             HHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHH
Confidence            666666666666542 2                                        122222 112   2677 8 999


Q ss_pred             ec------------CCCC-ChHHHHHHHHcCCCCCCCCCC--CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         117 FG------------SGGM-TNAEVLHQVEHGYRMPCPPGC--PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       117 fG------------~~~~-~~~~~~~~v~~g~~~~~p~~~--p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ||            |.+. +...+...+..+..+..|...  ++.+.+++.+||+.+|.+|||+.+|+.
T Consensus       192 ~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         192 LGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            99            4443 233444445556556666554  999999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.37  E-value=5.4e-13  Score=100.01  Aligned_cols=145  Identities=17%  Similarity=0.107  Sum_probs=93.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC---CCCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG---RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~---~~~~~l~~li~~~~~~a   81 (189)
                      .+.|+|++++++.+......++|+|+++.+. +    ..                 ++..   ...+....+..+..+.+
T Consensus        55 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-l----~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~  112 (286)
T cd06622          55 KAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS-L----DK-----------------LYAGGVATEGIPEDVLRRITYAVV  112 (286)
T ss_pred             hcCCCcHHhhhhheecCCeEEEEEeecCCCC-H----HH-----------------HHHhccccCCCCHHHHHHHHHHHH
Confidence            4678999999987776777889999887632 1    11                 1111   11233444555555666


Q ss_pred             CCceeecc-CCcccccc-cc----------------------------------cccccCC-------CCCccc-e-EEE
Q psy1684          82 DGLCVNLR-KPCVQVSC-RI----------------------------------YLVHGTN-------LSGVVV-S-AVD  116 (189)
Q Consensus        82 ~gl~~~~~-~~~~~~~~-p~----------------------------------~l~~~~~-------~~~~~~-s-Vws  116 (189)
                      .++.++|. .+++|+|+ |+                                  ++++|..       ...++. + |||
T Consensus       113 ~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diws  192 (286)
T cd06622         113 KGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWS  192 (286)
T ss_pred             HHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHh
Confidence            66777764 36667664 32                                  1222221       123578 8 999


Q ss_pred             ec------------CCCCChHHHH---HHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         117 FG------------SGGMTNAEVL---HQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       117 fG------------~~~~~~~~~~---~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ||            |...+...+.   ..+..+..+..|..++.++.++|.+||..+|++||++.+++..
T Consensus       193 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         193 LGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            99            3333333333   3344566666778899999999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.37  E-value=1.4e-13  Score=102.27  Aligned_cols=145  Identities=12%  Similarity=0.084  Sum_probs=87.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCc--CHhHHHHHhhhc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTI--HYPELVEHYSKD   80 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~--~l~~li~~~~~~   80 (189)
                      ..++|+|++++++.+...+..++|.|+.+++. +    ..                 ++... ..+  ....+..+..+.
T Consensus        60 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~l~~~~~~~~~~~~~~~~~~~qi  117 (268)
T cd06624          60 SYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS-L----SA-----------------LLRSKWGPLKDNEQTIIFYTKQI  117 (268)
T ss_pred             HhcCCCCeeeeeeeeccCCEEEEEEecCCCCC-H----HH-----------------HHHHhcccCCCcHHHHHHHHHHH
Confidence            35678888888877766667788888776522 1    11                 11100 011  123333444556


Q ss_pred             cCCceeeccCCcccccc-cc-------------------------------------cccccC-CC--CCccc-e-EEEe
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI-------------------------------------YLVHGT-NL--SGVVV-S-AVDF  117 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~-------------------------------------~l~~~~-~~--~~~~~-s-Vwsf  117 (189)
                      +.|+.++|..+++|+|+ |.                                     ++++|. ..  ..++. + ||||
T Consensus       118 ~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~sl  197 (268)
T cd06624         118 LEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSL  197 (268)
T ss_pred             HHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHH
Confidence            66666777666666664 22                                     122222 12  23778 9 9999


Q ss_pred             c------------CCCCC-hHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         118 G------------SGGMT-NAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       118 G------------~~~~~-~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |            |.... ........ .....+..|..+++++.+++.+||+.+|++|||+.+|+.
T Consensus       198 Gvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         198 GCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            9            22222 12222222 223445678889999999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.37  E-value=1.8e-13  Score=104.61  Aligned_cols=142  Identities=11%  Similarity=-0.059  Sum_probs=90.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++......+..++|+|++.++. +    ..                 ++.....+.......+..+...|+
T Consensus        52 ~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~~~~~~~~~~~~~~~~qi~~~L  109 (325)
T cd05602          52 NVKHPFLVGLHFSFQTADKLYFVLDYINGGE-L----FY-----------------HLQRERCFLEPRARFYAAEIASAL  109 (325)
T ss_pred             hCCCCCCCceeEEEEcCCeEEEEEeCCCCCc-H----HH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            3455666655554444445566666655421 1    11                 222223333333444566777888


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++.                     |. ....++. + |||+|      
T Consensus       110 ~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (325)
T cd05602         110 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM  189 (325)
T ss_pred             HHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHH
Confidence            8888888888885 44               3222                     11 3456888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                            |.+.+..+....+..+. ...++.++.++.+++.+|++.||++||+..+.+
T Consensus       190 ~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         190 LYGLPPFYSRNTAEMYDNILNKP-LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             hcCCCCCCCCCHHHHHHHHHhCC-cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence                  55566667666665442 345568899999999999999999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.37  E-value=1.7e-13  Score=102.30  Aligned_cols=104  Identities=13%  Similarity=0.126  Sum_probs=73.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCccccccc-c---------------c---------------------ccccC-CCCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSCR-I---------------Y---------------------LVHGT-NLSG  109 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~p-~---------------~---------------------l~~~~-~~~~  109 (189)
                      +....+.....+.+.++.++|..+++|+|+. .               +                     +++|. ....
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  177 (277)
T cd06641          98 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  177 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCC
Confidence            3345555566666677777777777777642 2               1                     22222 3345


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ++. + |||||            +.+.+.......+..+..+..+..+|.++.+++.+||..+|.+||++.++++.
T Consensus       178 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         178 YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            788 8 99999            44455555666666666666777899999999999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.37  E-value=7.3e-14  Score=102.86  Aligned_cols=144  Identities=12%  Similarity=0.101  Sum_probs=88.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......++|+|+.....     +..                 ++.. ...+.......+..+.+.|
T Consensus        54 ~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~-----L~~-----------------~l~~~~~~l~~~~~~~~~~~l~~~  111 (256)
T cd06612          54 QCDSPYIVKYYGSYFKNTDLWIVMEYCGAGS-----VSD-----------------IMKITNKTLTEEEIAAILYQTLKG  111 (256)
T ss_pred             hCCCCcEeeeeeeeecCCcEEEEEecCCCCc-----HHH-----------------HHHhCccCCCHHHHHHHHHHHHHH
Confidence            4567777777766655555667777665421     111                 1111 1223344555566666777


Q ss_pred             ceeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |.                                    ++++|. ....++. + |||||     
T Consensus       112 l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~  191 (256)
T cd06612         112 LEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIE  191 (256)
T ss_pred             HHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHH
Confidence            77888777777775 33                                    111211 3346788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGY--RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~--~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |...++.+....+....  ....|...+.++.+++.+||+.||++|||+.+|+.
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         192 MAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence                   34444444333332221  22344567889999999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.37  E-value=1.6e-13  Score=103.21  Aligned_cols=63  Identities=16%  Similarity=0.161  Sum_probs=46.3

Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..++. + |||||            |.+.+..+....+..+..+  ..|..++.++.+++.+||..||++||++.+|++
T Consensus       190 ~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         190 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             CCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            34788 8 99999            3334444444444444322  345678899999999999999999999999976

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.37  E-value=3.2e-14  Score=105.56  Aligned_cols=105  Identities=15%  Similarity=0.143  Sum_probs=64.6

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC----C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT----N  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~----~  106 (189)
                      +.......+..+.+.|+.++|..+++|+|+ |.                                    ++++|.    .
T Consensus       103 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  182 (267)
T cd06646         103 LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEK  182 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHccccc
Confidence            344455555666677777777777777764 33                                    122221    1


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHH-cCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVE-HGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~-~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                      ...++. + |||||            |.+.++.+....+. ....++.+   ...+.++.+++.+||+.||++|||+++|
T Consensus       183 ~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  262 (267)
T cd06646         183 NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERL  262 (267)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence            334778 8 99999            22222222222221 22222222   3467899999999999999999999999


Q ss_pred             HHHH
Q psy1684         169 QWKL  172 (189)
Q Consensus       169 ~~~l  172 (189)
                      ++.|
T Consensus       263 l~~l  266 (267)
T cd06646         263 LTHL  266 (267)
T ss_pred             hcCC
Confidence            8643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.37  E-value=3.2e-13  Score=99.37  Aligned_cols=145  Identities=12%  Similarity=0.066  Sum_probs=98.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC----CCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG----RTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~----~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++.+........++|+++.+...     +..                 ++..    ...+....+..+..+
T Consensus        54 ~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~~~~  111 (256)
T cd08530          54 ASVNHPNIISYKEAFLDGNKLCIVMEYAPFGD-----LSK-----------------AISKRKKKRKLIPEQEIWRIFIQ  111 (256)
T ss_pred             HhCCCCCchhhhhhhccCCEEEEEehhcCCCC-----HHH-----------------HHHHHHhhcCCCCHHHHHHHHHH
Confidence            45677888887766655566777887765522     111                 1110    122334445555666


Q ss_pred             ccCCceeeccCCcccccc-ccc----------------------------------ccccC-CCCCccc-e-EEEec---
Q psy1684          80 DADGLCVNLRKPCVQVSC-RIY----------------------------------LVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~~----------------------------------l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      .+.|+.++|..+++|+|+ |..                                  +++|. ....++. + |||+|   
T Consensus       112 l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~  191 (256)
T cd08530         112 LLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLL  191 (256)
T ss_pred             HHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHH
Confidence            677777888888778765 331                                  11111 3445788 8 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |...+..++...+..+..++.+...+.++.+++.+||+.+|++||++.+++.
T Consensus       192 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         192 YEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                     5555666777777777777777889999999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.36  E-value=1.2e-13  Score=103.41  Aligned_cols=64  Identities=20%  Similarity=0.254  Sum_probs=45.3

Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||            |.+.+..+.+..+..+..  ...|..++.++.+||.+||+.||++|||+.+|++.
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            34788 9 99999            333333333333333322  22456678899999999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.36  E-value=2.6e-13  Score=103.76  Aligned_cols=140  Identities=13%  Similarity=-0.019  Sum_probs=92.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++......+..+||+|++.++. +    ..                 ++.....+.......+..+.+.|+
T Consensus        52 ~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~l~~~~~~~~~~~~~~~~qi~~al  109 (325)
T cd05604          52 NVKHPFLVGLHYSFQTTEKLYFVLDFVNGGE-L----FF-----------------HLQRERSFPEPRARFYAAEIASAL  109 (325)
T ss_pred             hCCCCCCccEEEEEecCCEEEEEEcCCCCCC-H----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            3556666665554444455666666655421 1    01                 222233444555566677888899


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |+++                     |. ....++. + |||||      
T Consensus       110 ~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  189 (325)
T cd05604         110 GYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEM  189 (325)
T ss_pred             HHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhh
Confidence            9999999999986 43               2222                     11 3456788 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                            |.+.+..++...+..+. +..++..+.++.+++.+|+..||.+||++.+
T Consensus       190 ~~G~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         190 LYGLPPFYCRDVAEMYDNILHKP-LVLRPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             hcCCCCCCCCCHHHHHHHHHcCC-ccCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence                  55556667777766553 3445578899999999999999999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.35  E-value=4e-13  Score=102.96  Aligned_cols=137  Identities=9%  Similarity=-0.061  Sum_probs=85.7

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++........|||+|++++ +++    ..                 ++.....+.......+..+.+.|+.+
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~E~~~~-~~L----~~-----------------~~~~~~~l~~~~~~~i~~qi~~~l~~  111 (329)
T cd05618          54 NHPFLVGLHSCFQTESRLFFVIEYVNG-GDL----MF-----------------HMQRQRKLPEEHARFYSAEISLALNY  111 (329)
T ss_pred             CCCcCCceeeEEEeCCEEEEEEeCCCC-CCH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            566676666655555556677776665 311    11                 22222334445555566777888888


Q ss_pred             eccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +|...++|+|+ |+               |+++                     |. ....++. + |||||        
T Consensus       112 lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  191 (329)
T cd05618         112 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  191 (329)
T ss_pred             HHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhh
Confidence            99888889886 44               2222                     11 3455788 9 99999        


Q ss_pred             ----CCC--------CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         119 ----SGG--------MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       119 ----~~~--------~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                          |..        ....+.+...........|..++.++.+|+.+||+.||++||+.
T Consensus       192 g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         192 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence                211        01112222222233456788899999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.35  E-value=1.9e-13  Score=100.55  Aligned_cols=104  Identities=15%  Similarity=0.171  Sum_probs=78.0

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLS  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~  108 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |.                                    +++++. ...
T Consensus        99 ~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  178 (258)
T cd08215          99 PFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK  178 (258)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccC
Confidence            3446667777777888888888888888875 33                                    111111 234


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||+|            |...+..++...+..+...+.|..++.++.+++.+||..+|++|||+.++++
T Consensus       179 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         179 PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            5778 8 99999            4455566677776666667778899999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.35  E-value=1.3e-13  Score=105.07  Aligned_cols=103  Identities=14%  Similarity=0.083  Sum_probs=71.0

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc--------------------------------cccccC----CCCCccc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------YLVHGT----NLSGVVV  112 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------~l~~~~----~~~~~~~  112 (189)
                      ..++..+..+.+.|+.++|...++|+|+ |.                                ++++|.    ..+.++.
T Consensus       124 ~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  203 (317)
T cd06635         124 EVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDG  203 (317)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCc
Confidence            4445555666777788888888888775 33                                222332    2345788


Q ss_pred             -e-EEEec------------CCCCChHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         113 -S-AVDFG------------SGGMTNAEVLHQVEHGYR-MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       113 -s-VwsfG------------~~~~~~~~~~~~v~~g~~-~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                       + |||||            |.+.........+..+.. ...+..+++.+.+|+.+||+.+|.+||++.+|++.+
T Consensus       204 ~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         204 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence             8 99999            334444555555544433 333456889999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=2.2e-13  Score=100.70  Aligned_cols=144  Identities=12%  Similarity=0.100  Sum_probs=85.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++........++++|+...+.     +..                 ++... ..+....+.....+.+.|
T Consensus        56 ~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~-----l~~-----------------~~~~~~~~l~~~~~~~~~~ql~~~  113 (262)
T cd06613          56 ECRHPNIVAYFGSYLRRDKLWIVMEYCGGGS-----LQD-----------------IYQVTRGPLSELQIAYVCRETLKG  113 (262)
T ss_pred             hCCCCChhceEEEEEeCCEEEEEEeCCCCCc-----HHH-----------------HHHhhccCCCHHHHHHHHHHHHHH
Confidence            5677777777765555556677777665421     111                 11111 223334444455555666


Q ss_pred             ceeeccCCcccccc-cc------------------------------------cccccC-CCC---Cccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLS---GVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~---~~~~-s-VwsfG--  118 (189)
                      +.++|...++|+|+ |.                                    ++++|. ...   .++. + |||||  
T Consensus       114 l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~  193 (262)
T cd06613         114 LAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT  193 (262)
T ss_pred             HHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHH
Confidence            66666666666664 22                                    222332 223   6888 9 99999  


Q ss_pred             ----------CCCCChHHHHHHHHcC-CCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHG-YRMP---CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g-~~~~---~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                |.+.+..+....+... ..++   .+...|.++.+++.+||..||.+|||+.+|+.
T Consensus       194 l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         194 AIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                      4444544444444322 2222   23345788999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.35  E-value=2.2e-13  Score=103.43  Aligned_cols=104  Identities=13%  Similarity=0.093  Sum_probs=70.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------------------------cccccC----CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------YLVHGT----NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------~l~~~~----~~~~~  110 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |.                                ++++|.    ..+.+
T Consensus       112 l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  191 (308)
T cd06634         112 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQY  191 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCC
Confidence            334445555566677788888888888775 33                                122221    12457


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPC-PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~-p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +. + |||||            |.+.+..+....+..+..+.. +..++..+.+||.+||+.+|.+||++.++++.
T Consensus       192 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             CcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            88 8 99999            334444445555555544433 45688999999999999999999999998865

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.35  E-value=1.6e-13  Score=102.86  Aligned_cols=104  Identities=17%  Similarity=0.200  Sum_probs=71.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLS  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~  108 (189)
                      .+...++..+..+.+.|+.++|..+++|.|+ |.                                    ++++|. ...
T Consensus       112 ~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  191 (286)
T cd06614         112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK  191 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCC
Confidence            4445566667777788888888888888875 33                                    111221 234


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||||            |.+.++......+..+..++  .+..+|.++.+++.+||+.+|.+||++.+|+.
T Consensus       192 ~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         192 DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            5788 9 99999            44444444444443333332  23348999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.34  E-value=2.4e-13  Score=102.70  Aligned_cols=143  Identities=10%  Similarity=0.036  Sum_probs=86.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++.+++.+...+..++|+|+... +.+    ..                 ++. ...++..++.....+.+.++
T Consensus        72 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~L----~~-----------------~~~-~~~l~~~~~~~i~~~l~~al  128 (296)
T cd06655          72 ELKNPNIVNFLDSFLVGDELFVVMEYLAG-GSL----TD-----------------VVT-ETCMDEAQIAAVCRECLQAL  128 (296)
T ss_pred             hcCCCceeeeeeeEecCceEEEEEEecCC-CcH----HH-----------------HHH-hcCCCHHHHHHHHHHHHHHH
Confidence            45666666666655545556666666554 211    10                 111 11233444444455555666


Q ss_pred             eeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |.                                    ++++|. ....++. + |||||      
T Consensus       129 ~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~l  208 (296)
T cd06655         129 EFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM  208 (296)
T ss_pred             HHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHH
Confidence            7777777777664 33                                    122222 3345788 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGY--RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~--~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            |.+.+..+....+..+.  .+..|..+++.+.++|.+||..||.+||++.+|+.
T Consensus       209 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         209 VEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                  44444444444443332  23356778999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.34  E-value=2.7e-13  Score=100.51  Aligned_cols=64  Identities=20%  Similarity=0.250  Sum_probs=47.2

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |...+.......+..  +..++.|..++.++.+++.+||+.+|++||++.+++.
T Consensus       182 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         182 ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            344678 8 99999            444443333333322  4445677889999999999999999999999998874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG2052|consensus

Probab=99.34  E-value=2.9e-13  Score=103.55  Aligned_cols=151  Identities=17%  Similarity=0.225  Sum_probs=97.9

Q ss_pred             CCChHHHHHHhcCCCCCCCc----EEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhc
Q psy1684           5 KIKRIEAEKKLLLPENDHGA----FLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKD   80 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~----fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~   80 (189)
                      .|+|+|+..+++...+..|+    +||.+|.+.+.     +.+                 ||.. ..+.....+......
T Consensus       261 mLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GS-----L~D-----------------yL~r-~tv~~~~ml~LalS~  317 (513)
T KOG2052|consen  261 MLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGS-----LYD-----------------YLNR-NTVTTEGMLKLALSI  317 (513)
T ss_pred             HhccchhhhhhhccccCCCceEEEEEeeecccCCc-----HHH-----------------HHhh-ccCCHHHHHHHHHHH
Confidence            47899999999866665554    78999888843     222                 3331 233344445444555


Q ss_pred             cCCceeecc-------C-Ccccccccc-----------------------------------------cccccC-----C
Q psy1684          81 ADGLCVNLR-------K-PCVQVSCRI-----------------------------------------YLVHGT-----N  106 (189)
Q Consensus        81 a~gl~~~~~-------~-~~~~~~~p~-----------------------------------------~l~~~~-----~  106 (189)
                      |.||+.+|.       + .+.|||+..                                         .||||.     .
T Consensus       318 AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin  397 (513)
T KOG2052|consen  318 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETIN  397 (513)
T ss_pred             hhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcC
Confidence            556555553       1 245555443                                         444444     3


Q ss_pred             CCCccc---e-EEEec----------------------CCCC-----ChHHHHHHH-HcCCCCCCCCC-----CCHHHHH
Q psy1684         107 LSGVVV---S-AVDFG----------------------SGGM-----TNAEVLHQV-EHGYRMPCPPG-----CPPRLYD  149 (189)
Q Consensus       107 ~~~~~~---s-VwsfG----------------------~~~~-----~~~~~~~~v-~~g~~~~~p~~-----~p~~~~~  149 (189)
                      ...|..   + |||||                      |-++     +.+++.+.| .+..||++|..     +-..+.+
T Consensus       398 ~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~k  477 (513)
T KOG2052|consen  398 MKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAK  477 (513)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHH
Confidence            334543   6 99999                      3332     234454444 57788888863     2357789


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         150 IMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       150 l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      ||+.||..||+.|-|+--|.+.|..+.++
T Consensus       478 lMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  478 LMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             HHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            99999999999999999999999988764

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=7.7e-13  Score=101.35  Aligned_cols=106  Identities=8%  Similarity=-0.143  Sum_probs=73.8

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-C
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-N  106 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~  106 (189)
                      ...+....+..+..+.+.|+.++|..+++|+|+ |+               |++                     +|. .
T Consensus        90 ~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~  169 (330)
T cd05586          90 EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLL  169 (330)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHc
Confidence            344555666667778888999999999999986 44               222                     221 1


Q ss_pred             C-CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHH
Q psy1684         107 L-SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT----FET  167 (189)
Q Consensus       107 ~-~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~----~~~  167 (189)
                      . ..++. + |||+|            |.+.+..++...+..+.........+.++.+++.+||..||++||+    +.+
T Consensus       170 ~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~  249 (330)
T cd05586         170 DEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVE  249 (330)
T ss_pred             CCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHH
Confidence            2 23788 9 99999            4445556677777665432223457899999999999999999995    555


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      +++
T Consensus       250 ll~  252 (330)
T cd05586         250 LKE  252 (330)
T ss_pred             Hhc
Confidence            544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.34  E-value=2.3e-13  Score=102.20  Aligned_cols=102  Identities=10%  Similarity=0.060  Sum_probs=69.6

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCCCc
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGV  110 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~  110 (189)
                      ...++..+..+.+.++.++|...++|+|+ |.                                    ++++|. ....+
T Consensus       113 ~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (285)
T cd06648         113 NEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPY  192 (285)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCC
Confidence            34445556667777788888888888875 33                                    111111 23457


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +. + |||||            |.+.++.+....+..+..+.  .+..+|..+.++|.+||+.||++|||+.++++
T Consensus       193 ~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         193 GTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            88 9 99999            34444555556665553222  23348899999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=4.2e-13  Score=100.74  Aligned_cols=143  Identities=13%  Similarity=-0.046  Sum_probs=88.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC--CCCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA--GRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~--~~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++.+++.+...+..++|+|++..+. +    ..                 ++.  ....+....+..+..+.+.
T Consensus        56 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~~~~~~~~~~~~~~~~~~qi~~  113 (285)
T cd05605          56 KVNSRFVVSLAYAYETKDALCLVLTLMNGGD-L----KF-----------------HIYNMGNPGFDEERAVFYAAEITC  113 (285)
T ss_pred             hcCCCCEeeeeeeecCCCeEEEEEeccCCCc-H----HH-----------------HHHhcCcCCCCHHHHHHHHHHHHH
Confidence            3456666666555555555666666665422 1    11                 111  1123445556666677778


Q ss_pred             CceeeccCCcccccc-cc---------------cc--------------------cccC-CCCCccc-e-EEEec-----
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL--------------------VHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l--------------------~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      |+.++|...++|+|+ |.               ++                    ++|. ....++. + |||||     
T Consensus       114 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~e  193 (285)
T cd05605         114 GLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYE  193 (285)
T ss_pred             HHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHH
Confidence            888888888888875 33               11                    1111 3355788 9 99999     


Q ss_pred             -------CCCCChHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 -------SGGMTNAE----VLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~----~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                             |.+.+...    +...+.. .....|...+..+++|+.+||..||++||     +++++++
T Consensus       194 l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         194 MIEGKSPFRQRKEKVKREEVERRVKE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHHCCCCCCCCchhhHHHHHHHHhhh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence                   54443322    2233332 33455677899999999999999999999     7778754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.34  E-value=6.5e-13  Score=98.08  Aligned_cols=145  Identities=12%  Similarity=0.055  Sum_probs=94.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++........|+|++++.. +.    +..                 ++.....+.......+..+.+.|+
T Consensus        49 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~~L  106 (265)
T cd05579          49 QAQSPYVVKLYYSFQGKKNLYLVMEYLPG-GD----LAS-----------------LLENVGSLDEDVARIYIAEIVLAL  106 (265)
T ss_pred             hCCCcchhHHHHheecCcEEEEEEecCCC-Cc----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            46789999988777666677888888775 31    111                 121112233444555556666777


Q ss_pred             eeeccCCccccccc-c--------------------------------------------cccccC-CCCCccc-e-EEE
Q psy1684          85 CVNLRKPCVQVSCR-I--------------------------------------------YLVHGT-NLSGVVV-S-AVD  116 (189)
Q Consensus        85 ~~~~~~~~~~~~~p-~--------------------------------------------~l~~~~-~~~~~~~-s-Vws  116 (189)
                      .++|...++|+|+. .                                            +++++. ....++. + |||
T Consensus       107 ~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~s  186 (265)
T cd05579         107 EYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWS  186 (265)
T ss_pred             HHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHH
Confidence            77777777777652 2                                            111111 2334677 8 999


Q ss_pred             ec------------CCCCChHHHHHHHHcCCCCCCCCCC--CHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         117 FG------------SGGMTNAEVLHQVEHGYRMPCPPGC--PPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       117 fG------------~~~~~~~~~~~~v~~g~~~~~p~~~--p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ||            |...+..++...+..+. .+.|..+  +.++.+++.+||+.+|++|||++++.+.|
T Consensus       187 lG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         187 LGCILYEFLVGIPPFHGETPEEIFQNILNGK-IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence            99            55556667766665543 4455555  99999999999999999999996655544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.34  E-value=4.9e-13  Score=99.50  Aligned_cols=144  Identities=12%  Similarity=0.114  Sum_probs=83.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+...+..++|.|+.+++.     +..                 ++.....+.......+..+.+.++
T Consensus        64 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~l~~~~~~~~~~qi~~~l  121 (272)
T cd06629          64 DLDHLNIVQYLGFETTEEYLSIFLEYVPGGS-----IGS-----------------CLRTYGRFEEQLVRFFTEQVLEGL  121 (272)
T ss_pred             hcCCCCcceEEEEeccCCceEEEEecCCCCc-----HHH-----------------HHhhccCCCHHHHHHHHHHHHHHH
Confidence            4567777777766655566677777666522     111                 122222233233333445566667


Q ss_pred             eeeccCCcccccc-cc--------------------------------------cccccC-CC--CCccc-e-EEEec--
Q psy1684          85 CVNLRKPCVQVSC-RI--------------------------------------YLVHGT-NL--SGVVV-S-AVDFG--  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~--------------------------------------~l~~~~-~~--~~~~~-s-VwsfG--  118 (189)
                      .++|...++|+|+ |+                                      ++++|. ..  ..++. + |||||  
T Consensus       122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~  201 (272)
T cd06629         122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV  201 (272)
T ss_pred             HHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHH
Confidence            7777777777664 22                                      122222 11  23788 8 99999  


Q ss_pred             ----------CCCCChHHHHHHH-HcCCCCCCCC----CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQV-EHGYRMPCPP----GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v-~~g~~~~~p~----~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                |...+..+....+ ....+++.|.    .++.++.+++.+||..+|++|||+.+|++
T Consensus       202 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         202 VLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence                      3333333323233 2233344443    46889999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0595|consensus

Probab=99.33  E-value=7.3e-14  Score=105.68  Aligned_cols=148  Identities=15%  Similarity=0.113  Sum_probs=109.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhc
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKD   80 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~   80 (189)
                      |....|+|+|+|.++.++...+..|||+|++.. |++.-                     |+.....++-.-...|..|.
T Consensus        61 ~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~g-GDLs~---------------------yi~~~~~l~e~t~r~Fm~QL  118 (429)
T KOG0595|consen   61 KILKELKHPNIVRLLDCIEDDDFIYLVMEYCNG-GDLSD---------------------YIRRRGRLPEATARHFMQQL  118 (429)
T ss_pred             HHHHhcCCcceeeEEEEEecCCeEEEEEEeCCC-CCHHH---------------------HHHHcCCCCHHHHHHHHHHH
Confidence            345689999999999988888889999999997 43221                     44444444433334466788


Q ss_pred             cCCceeeccCCcccccc-cc-----------------------------------------cccccC-CCCCccc-e-EE
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI-----------------------------------------YLVHGT-NLSGVVV-S-AV  115 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~-----------------------------------------~l~~~~-~~~~~~~-s-Vw  115 (189)
                      |.|+.++|.+.|+|||+ |.                                         .||+|+ ..++|+. + .|
T Consensus       119 A~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLW  198 (429)
T KOG0595|consen  119 ASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLW  198 (429)
T ss_pred             HHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHH
Confidence            88999999999999985 54                                         222222 5788999 9 99


Q ss_pred             Eec------------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         116 DFG------------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       116 sfG------------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |.|            |...+..++...++.|..  +..|..+.....+|+..-+..||.+|-+|.+-..
T Consensus       199 SiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  199 SIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD  267 (429)
T ss_pred             HHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence            999            777788899888877643  4455667777778988889999999988876543

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.33  E-value=4.8e-13  Score=102.52  Aligned_cols=142  Identities=10%  Similarity=-0.036  Sum_probs=87.8

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++.+.+......|||+|++++ |++    ..                 ++.....+.......+..+.+.|+.+
T Consensus        54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~-g~L----~~-----------------~~~~~~~l~~~~~~~~~~qi~~~l~~  111 (329)
T cd05588          54 NHPFLVGLHSCFQTESRLFFVIEFVSG-GDL----MF-----------------HMQRQRKLPEEHARFYSAEISLALNF  111 (329)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCC-CCH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            355666655544444455666666554 211    00                 22223344555566677788888999


Q ss_pred             eccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+++|+|+ |+               |+++                     |. ....++. + |||||        
T Consensus       112 lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~  191 (329)
T cd05588         112 LHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  191 (329)
T ss_pred             HHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHH
Confidence            99999999885 44               2222                     11 3456888 9 99999        


Q ss_pred             ----CCC--------CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC------HHHHHH
Q psy1684         119 ----SGG--------MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT------FETLQW  170 (189)
Q Consensus       119 ----~~~--------~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~------~~~i~~  170 (189)
                          |..        ....+.............|..++.++.+++.+|++.||.+||+      +.++++
T Consensus       192 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         192 GRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             CCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence                321        1112222222223345677889999999999999999999998      566653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG4645|consensus

Probab=99.33  E-value=9.5e-14  Score=117.63  Aligned_cols=146  Identities=12%  Similarity=0.040  Sum_probs=107.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..|.|+|+|+.+|+..+.+-.+|.+|++.. |    ++..    ...|-++.             ...-.--|+.+...|
T Consensus      1289 E~lnHpNlV~YyGVEvHRekv~IFMEyC~~-G----sLa~----ll~~gri~-------------dE~vt~vyt~qll~g 1346 (1509)
T KOG4645|consen 1289 EGLNHPNLVRYYGVEVHREKVYIFMEYCEG-G----SLAS----LLEHGRIE-------------DEMVTRVYTKQLLEG 1346 (1509)
T ss_pred             HhccCccccccCceeecHHHHHHHHHHhcc-C----cHHH----HHHhcchh-------------hhhHHHHHHHHHHHH
Confidence            468999999999999988999999999997 4    2222    11111110             011112356677788


Q ss_pred             ceeeccCCcccccc-cc----------------------------------------cccccC---C--CCCccce-EEE
Q psy1684          84 LCVNLRKPCVQVSC-RI----------------------------------------YLVHGT---N--LSGVVVS-AVD  116 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~----------------------------------------~l~~~~---~--~~~~~~s-Vws  116 (189)
                      ++++|..+|+|||+ |+                                        .||+|.   .  .++...+ |||
T Consensus      1347 la~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWs 1426 (1509)
T KOG4645|consen 1347 LAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWS 1426 (1509)
T ss_pred             HHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhc
Confidence            99999999999985 55                                        333433   1  2223335 999


Q ss_pred             ec------------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         117 FG------------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       117 fG------------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +|            |..++ .-+|+..|..|..|++|...+.+-.+++.+|+..||+.|.+..||++.
T Consensus      1427 lGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1427 LGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             ccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            99            55554 468999999999999999999999999999999999999998877653

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.33  E-value=6e-13  Score=101.59  Aligned_cols=139  Identities=9%  Similarity=-0.029  Sum_probs=91.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++......+..+||+|++.++. +    ..                 ++.....+.......+..+++.|+
T Consensus        52 ~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~l~~~~~~~~~~~~~~~~qi~~~L  109 (321)
T cd05603          52 NLKHPFLVGLHYSFQTAEKLYFVLDYVNGGE-L----FF-----------------HLQRERCFLEPRARFYAAEVASAI  109 (321)
T ss_pred             hCCCCCccceeeEEEcCCEEEEEEcCCCCCC-H----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4567777776655555556677777766522 1    01                 122222333444455666777888


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++.                     |. ....++. + |||||      
T Consensus       110 ~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (321)
T cd05603         110 GYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEM  189 (321)
T ss_pred             HHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhh
Confidence            8888888888886 44               2222                     11 3456888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                            |.+.+..++...+..+ ....|...+.++.+++.+|++.||.+||+..
T Consensus       190 ~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         190 LYGLPPFYSRDVSQMYDNILHK-PLQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             hcCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                  5555556666666554 3566778899999999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.32  E-value=2e-13  Score=103.07  Aligned_cols=103  Identities=11%  Similarity=0.033  Sum_probs=69.7

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc---------------------cccC-CCCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-NLSG  109 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~~~~  109 (189)
                      +...++..+..+.+.|+.++|..+++|+|+ |.               ++                     ++|. ....
T Consensus       113 ~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  192 (296)
T cd06654         113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  192 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCC
Confidence            345566666777788888888888888886 33               11                     1111 2344


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHH-HcCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQV-EHGY-RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v-~~g~-~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++. + |||||            |.+.++......+ ..+. ..+.|...+..+.+++.+||..||++||++.+|++
T Consensus       193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            778 8 99999            4344343332233 2222 22345678899999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.32  E-value=4e-13  Score=101.80  Aligned_cols=67  Identities=16%  Similarity=0.019  Sum_probs=50.2

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |.+.++.++...+..+..  +..+..+|.++.+|+.+||+.||++||++.++.+
T Consensus       190 ~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  269 (305)
T cd05609         190 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFE  269 (305)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence            345788 8 99999            556677777777655532  2233468999999999999999999999766665


Q ss_pred             HHH
Q psy1684         171 KLE  173 (189)
Q Consensus       171 ~l~  173 (189)
                      .|+
T Consensus       270 ll~  272 (305)
T cd05609         270 VKQ  272 (305)
T ss_pred             HHh
Confidence            554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.32  E-value=1.8e-13  Score=104.88  Aligned_cols=30  Identities=23%  Similarity=0.244  Sum_probs=27.3

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+++++.+++.+||+.||++|||++++++.
T Consensus       261 ~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         261 NADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            467889999999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.32  E-value=1.7e-13  Score=102.54  Aligned_cols=102  Identities=10%  Similarity=-0.103  Sum_probs=68.6

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCcc
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGVV  111 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~~  111 (189)
                      ....++.+..+.+.|+.++|..+++|+|+ |.               +++                    +|. ....++
T Consensus        93 ~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  172 (277)
T cd05607          93 EMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYS  172 (277)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCC
Confidence            35556667777888899999999999886 44               111                    111 334578


Q ss_pred             c-e-EEEec------------CCCCC----hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         112 V-S-AVDFG------------SGGMT----NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~----~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      . + |||+|            |.+..    ..++......+.........+.++.+|+..||+.||.+||+++|+++
T Consensus       173 ~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         173 YPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             CchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            8 9 99999            33321    23343333333322223468899999999999999999999977653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.32  E-value=5.4e-13  Score=98.62  Aligned_cols=105  Identities=19%  Similarity=0.196  Sum_probs=73.3

Q ss_pred             CcCHhHHHHHhhhccCCceeecc-CCcccccc-cc------------------------------------cccccC-CC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLR-KPCVQVSC-RI------------------------------------YLVHGT-NL  107 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~-~~~~~~~~-p~------------------------------------~l~~~~-~~  107 (189)
                      .+.......+..+.+.++.++|. ..++|+++ |.                                    ++++|. ..
T Consensus        95 ~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  174 (264)
T cd06623          95 KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG  174 (264)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC
Confidence            34455555666677778888888 78888775 33                                    111211 23


Q ss_pred             CCccc-e-EEEec------------CCCC---ChHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGM---TNAEVLHQVEHGYRMPCPPG-CPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~---~~~~~~~~v~~g~~~~~p~~-~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      ..++. + |||||            |...   ...++...+..+..+..+.. +|..+.+++.+||..+|++||++.+++
T Consensus       175 ~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll  254 (264)
T cd06623         175 ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELL  254 (264)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            45678 8 99999            3333   33455556666656666677 899999999999999999999999998


Q ss_pred             HH
Q psy1684         170 WK  171 (189)
Q Consensus       170 ~~  171 (189)
                      +.
T Consensus       255 ~~  256 (264)
T cd06623         255 QH  256 (264)
T ss_pred             hC
Confidence            74

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.32  E-value=6.2e-13  Score=100.27  Aligned_cols=145  Identities=12%  Similarity=0.005  Sum_probs=93.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+...+..++|+|++ . ++    +..                 ++.... .+...++..+..+++.
T Consensus        57 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~-~~----L~~-----------------~i~~~~~~~~~~~~~~~~~qi~~  113 (298)
T cd07841          57 QELKHPNIIGLLDVFGHKSNINLVFEFM-E-TD----LEK-----------------VIKDKSIVLTPADIKSYMLMTLR  113 (298)
T ss_pred             hhcCCCCChhhhheeecCCEEEEEEccc-C-CC----HHH-----------------HHhccCCCCCHHHHHHHHHHHHH
Confidence            4577889999888777777788899887 3 32    111                 222222 3446666777788888


Q ss_pred             CceeeccCCcccccc-cc---------------c---------------------ccccC--CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y---------------------LVHGT--NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~---------------------l~~~~--~~~~~~~-s-VwsfG---  118 (189)
                      ++.++|...++|+|+ |.               +                     +++|.  ....++. + |||||   
T Consensus       114 al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  193 (298)
T cd07841         114 GLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIF  193 (298)
T ss_pred             HHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            888999888888875 43               1                     11111  1234678 8 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCC----------------------CCCC-----CCCCCHHHHHHHHHhcccCCCCC
Q psy1684         119 ---------SGGMTNAEVLHQVEHGY----------------------RMPC-----PPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~----------------------~~~~-----p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                               |.+.+..+.+..+....                      ..+.     ....+.++.+++.+||+.||++|
T Consensus       194 ~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  273 (298)
T cd07841         194 AELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKR  273 (298)
T ss_pred             HHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccC
Confidence                     33333333333331110                      0011     13456889999999999999999


Q ss_pred             CCHHHHHHH
Q psy1684         163 PTFETLQWK  171 (189)
Q Consensus       163 P~~~~i~~~  171 (189)
                      ||+++++..
T Consensus       274 ~s~~e~l~~  282 (298)
T cd07841         274 ITARQALEH  282 (298)
T ss_pred             cCHHHHhhC
Confidence            999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.31  E-value=5e-13  Score=100.20  Aligned_cols=67  Identities=27%  Similarity=0.292  Sum_probs=45.9

Q ss_pred             CCCCccc-e-EEEec------------CCCCCh--------H---HHHHHHHcCCCCCCCCC-CCHHHHHHHHHhcccCC
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTN--------A---EVLHQVEHGYRMPCPPG-CPPRLYDIMLECWLKDP  159 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~--------~---~~~~~v~~g~~~~~p~~-~p~~~~~l~~~C~~~~p  159 (189)
                      ....++. + |||||            |.....        .   +....+.....+..+.. +|.++.+|+.+||+.||
T Consensus       175 ~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  254 (284)
T cd06620         175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDP  254 (284)
T ss_pred             ccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCc
Confidence            3456788 8 99999            332221        1   22233333333334433 88999999999999999


Q ss_pred             CCCCCHHHHHHHH
Q psy1684         160 VKRPTFETLQWKL  172 (189)
Q Consensus       160 ~~RP~~~~i~~~l  172 (189)
                      ++|||+.++++..
T Consensus       255 ~~Rpt~~e~~~~~  267 (284)
T cd06620         255 TERPTPQQLCAMP  267 (284)
T ss_pred             ccCcCHHHHhcCc
Confidence            9999999999763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.31  E-value=4.9e-13  Score=99.43  Aligned_cols=103  Identities=13%  Similarity=0.049  Sum_probs=67.7

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc---------------------cccCC----
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL---------------------VHGTN----  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~~----  106 (189)
                      +.......+..+.+.|+.++|..+++|+|+ |.               ++                     ++|..    
T Consensus       108 l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  187 (272)
T cd06637         108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  187 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhcccc
Confidence            333444555667777888888888888765 33               12                     22211    


Q ss_pred             --CCCccc-e-EEEec------------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         107 --LSGVVV-S-AVDFG------------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       107 --~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                        ...++. + |||||            |.+.+.......+. ...+...+..++.++.+|+.+||..||++|||+.+|+
T Consensus       188 ~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il  267 (272)
T cd06637         188 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLM  267 (272)
T ss_pred             CcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence              335888 9 99999            33333333333332 2333334567899999999999999999999999987


Q ss_pred             H
Q psy1684         170 W  170 (189)
Q Consensus       170 ~  170 (189)
                      +
T Consensus       268 ~  268 (272)
T cd06637         268 K  268 (272)
T ss_pred             h
Confidence            5

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=4.3e-13  Score=100.04  Aligned_cols=103  Identities=10%  Similarity=0.029  Sum_probs=68.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-C-CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-N-LS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~-~~  108 (189)
                      +....+.....+.+.|+.++|..+++|+|+ |.                                    ++++|. . ..
T Consensus        98 l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06917          98 IAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK  177 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCC
Confidence            334445556667777888888888888875 33                                    122222 1 23


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPP-GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~-~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||||            |.+.+.......+.....+..+. ..+.++.++|.+||..||++||++.++++
T Consensus       178 ~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         178 YYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            3678 8 99999            44444444333333333333344 37889999999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=5e-13  Score=98.80  Aligned_cols=103  Identities=16%  Similarity=0.003  Sum_probs=70.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c-----------------ccccC-CCCCccc-
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y-----------------LVHGT-NLSGVVV-  112 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~-----------------l~~~~-~~~~~~~-  112 (189)
                      +.......+..+.+.|+.++|..+++|+|+ |.               +                 +++|. ....++. 
T Consensus        94 ~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~  173 (260)
T cd05611          94 LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKM  173 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcch
Confidence            334555566677778888888888888875 33               1                 11221 2334688 


Q ss_pred             e-EEEec------------CCCCChHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         113 S-AVDFG------------SGGMTNAEVLHQVEHGYR---MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       113 s-VwsfG------------~~~~~~~~~~~~v~~g~~---~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      + |||||            |.+.+..++...+..+..   ...+..+|+++.+++.+||+.||++||++.++.+
T Consensus       174 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~  247 (260)
T cd05611         174 SDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE  247 (260)
T ss_pred             hhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence            9 99999            555566666666644422   2234468999999999999999999997755443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.30  E-value=8.1e-13  Score=100.96  Aligned_cols=100  Identities=16%  Similarity=0.040  Sum_probs=76.2

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------cC-C
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-N  106 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~  106 (189)
                      ...+....+..+..+.+.|+.++|..+++|+|+ |+               |++.                     |. .
T Consensus        95 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05616          95 VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIA  174 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhc
Confidence            334555666777788888999999999999986 44               2222                     11 4


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      ...++. + |||||            |.+.+..++...+..+. ...|...+.++.+|+.+|++.||++|++.
T Consensus       175 ~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         175 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            456888 9 99999            66667777777776543 45677899999999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=3.4e-12  Score=98.41  Aligned_cols=144  Identities=12%  Similarity=0.034  Sum_probs=93.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++......+..++|+|++..+.     +..                 ++.....+.......+..+.+.|+
T Consensus        57 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~l~~~~~~~i~~qi~~aL  114 (350)
T cd05573          57 DADSPWIVKLYYSFQDEEHLYLVMEYMPGGD-----LMN-----------------LLIRKDVFPEETARFYIAELVLAL  114 (350)
T ss_pred             hcCCCCccchhhheecCCeEEEEEcCCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4567777777766655566777777776522     111                 222222334444455566777788


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------------------------------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------------------------------  103 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------------------------------  103 (189)
                      .++|..+++|+|+ |+               +++.                                             
T Consensus       115 ~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  194 (350)
T cd05573         115 DSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTP  194 (350)
T ss_pred             HHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCc
Confidence            8888888888875 44               2211                                             


Q ss_pred             -----cC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHhcccCCC
Q psy1684         104 -----GT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH---GYRMPCPPGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       104 -----~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~---g~~~~~p~~~p~~~~~l~~~C~~~~p~  160 (189)
                           |. ....++. + |||||            |.+.+..+....+..   ....+....+|+++.+|+.+|+. ||.
T Consensus       195 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~  273 (350)
T cd05573         195 DYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPE  273 (350)
T ss_pred             cccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Chh
Confidence                 11 2345788 9 99999            555555566555543   22333334469999999999997 999


Q ss_pred             CCCC-HHHHHHH
Q psy1684         161 KRPT-FETLQWK  171 (189)
Q Consensus       161 ~RP~-~~~i~~~  171 (189)
                      +||+ ++++++.
T Consensus       274 ~R~~s~~~ll~h  285 (350)
T cd05573         274 DRLGSFEEIKSH  285 (350)
T ss_pred             hcCCCHHHHhcC
Confidence            9999 9999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.30  E-value=5.3e-13  Score=100.64  Aligned_cols=145  Identities=9%  Similarity=-0.017  Sum_probs=87.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++.+.+...+..++|+|+..++.     +..                 ++. ...+...++.....+.+.|
T Consensus        71 ~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~-~~~l~~~~~~~i~~~l~~a  127 (293)
T cd06647          71 RENKHPNIVNYLDSYLVGDELWVVMEYLAGGS-----LTD-----------------VVT-ETCMDEGQIAAVCRECLQA  127 (293)
T ss_pred             hhcCCCCeeehhheeeeCCcEEEEEecCCCCc-----HHH-----------------HHh-hcCCCHHHHHHHHHHHHHH
Confidence            35667777777776655666777777766522     111                 111 1122233444445555666


Q ss_pred             ceeeccCCccccccc-c------------------------------------cccccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSCR-I------------------------------------YLVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~p-~------------------------------------~l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+. .                                    ++++|. ..+.++. + |||||     
T Consensus       128 l~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~  207 (293)
T cd06647         128 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE  207 (293)
T ss_pred             HHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence            777777777776642 2                                    122222 3355788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+.+..+....+..+..+.  .+...+..+.+++.+||..+|.+||+|.+++..
T Consensus       208 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   44443333322232222222  344577899999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.29  E-value=4e-13  Score=102.01  Aligned_cols=30  Identities=20%  Similarity=0.390  Sum_probs=27.4

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++.++.+|+.+||..||++|||+++|++.
T Consensus       258 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         258 AFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            367889999999999999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.29  E-value=5.3e-13  Score=100.19  Aligned_cols=103  Identities=14%  Similarity=-0.038  Sum_probs=71.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~  109 (189)
                      .+.......+..+.+.|+.++|..+++|+|+ |+               |++                    +|. ....
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  177 (285)
T cd05631          98 GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEK  177 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCC
Confidence            3445556667778888999999999999986 44               222                    111 3456


Q ss_pred             ccc-e-EEEec------------CCCCCh----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HH
Q psy1684         110 VVV-S-AVDFG------------SGGMTN----AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FE  166 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~----~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~  166 (189)
                      ++. + |||||            |.+.+.    .++...+.. ...+.|...+.++.+|+.+||+.||++||+     ++
T Consensus       178 ~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~  256 (285)
T cd05631         178 YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAA  256 (285)
T ss_pred             CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHH
Confidence            888 9 99999            333322    222222322 234566788999999999999999999997     77


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      ++++
T Consensus       257 ~~~~  260 (285)
T cd05631         257 GVKQ  260 (285)
T ss_pred             HHhc
Confidence            7776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.29  E-value=9.6e-13  Score=98.55  Aligned_cols=145  Identities=11%  Similarity=0.066  Sum_probs=89.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......++|+|++.. +.+    ..                 +......+..........+++.|
T Consensus        55 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~l----~~-----------------~~~~~~~~~~~~~~~~~~~i~~~  112 (286)
T cd07846          55 KQLRHENLVNLIEVFRRKKRLYLVFEFVDH-TVL----DD-----------------LEKYPNGLDESRVRKYLFQILRG  112 (286)
T ss_pred             HhcCCcchhhHHHhcccCCeEEEEEecCCc-cHH----HH-----------------HHhccCCCCHHHHHHHHHHHHHH
Confidence            357789999999888777778999998775 211    01                 01111123355555566677777


Q ss_pred             ceeeccCCcccccc-cc---------------c---------------------ccccCC--CCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------Y---------------------LVHGTN--LSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~---------------------l~~~~~--~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |.               +                     +++|..  ...++. + |||||    
T Consensus       113 l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  192 (286)
T cd07846         113 IEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVT  192 (286)
T ss_pred             HHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHH
Confidence            77788777777765 33               1                     122211  234678 8 99999    


Q ss_pred             --------CCCCChHHHHHHHH--------------------cCCCCC----------CCCCCCHHHHHHHHHhcccCCC
Q psy1684         119 --------SGGMTNAEVLHQVE--------------------HGYRMP----------CPPGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~--------------------~g~~~~----------~p~~~p~~~~~l~~~C~~~~p~  160 (189)
                              |.+.+..+....+.                    .+...+          .++.++..+.+++.+||..||+
T Consensus       193 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  272 (286)
T cd07846         193 EMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPD  272 (286)
T ss_pred             HHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcc
Confidence                    33322222211111                    010000          1236788999999999999999


Q ss_pred             CCCCHHHHHH
Q psy1684         161 KRPTFETLQW  170 (189)
Q Consensus       161 ~RP~~~~i~~  170 (189)
                      +||++++|++
T Consensus       273 ~Rp~~~~il~  282 (286)
T cd07846         273 DRPSSSQLLH  282 (286)
T ss_pred             cchhHHHHhc
Confidence            9999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.29  E-value=5.7e-13  Score=98.89  Aligned_cols=104  Identities=14%  Similarity=0.125  Sum_probs=65.1

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC----
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT----  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~----  105 (189)
                      .+....+.....+.+.|+.++|..+++|+|+ |.                                    ++++|.    
T Consensus       102 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (267)
T cd06645         102 PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE  181 (267)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccc
Confidence            3445555556666677777777777777764 33                                    122222    


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHHH-cCCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVE-HGYRMPC---PPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~-~g~~~~~---p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                      ..+.++. + |||||            |....+........ ....++.   ...+|..+.+++.+||+.||++|||+.+
T Consensus       182 ~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  261 (267)
T cd06645         182 RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEK  261 (267)
T ss_pred             cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence            1345788 9 99999            22222323322222 2222221   1257789999999999999999999998


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      |++
T Consensus       262 ll~  264 (267)
T cd06645         262 LLQ  264 (267)
T ss_pred             Hhc
Confidence            875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.29  E-value=7.8e-13  Score=99.48  Aligned_cols=143  Identities=12%  Similarity=0.010  Sum_probs=92.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++........++|+|+.+.+.     +..                 ++.....+....+..+..+.+.|+
T Consensus        57 ~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~-----L~~-----------------~~~~~~~l~~~~~~~~~~qil~~l  114 (290)
T cd05580          57 SIRHPFLVNLYGSFQDDSNLYLVMEYVPGGE-----LFS-----------------HLRKSGRFPEPVARFYAAQVVLAL  114 (290)
T ss_pred             hCCCCCccceeeEEEcCCeEEEEEecCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4567777777666555556677777765422     111                 232233344444555566777788


Q ss_pred             eeeccCCcccccc-cc---------------------------------cccccC-CCCCccc-e-EEEec---------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------------------------YLVHGT-NLSGVVV-S-AVDFG---------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------------------------~l~~~~-~~~~~~~-s-VwsfG---------  118 (189)
                      .++|..+++|+|+ |.                                 ++++|. ....++. + |||||         
T Consensus       115 ~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  194 (290)
T cd05580         115 EYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAG  194 (290)
T ss_pred             HHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhC
Confidence            8888888888875 33                                 112221 2345678 8 99999         


Q ss_pred             ---CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 ---SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 ---~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                         |.+.+..++...+..+ .++.|...+..+++++.+||..||++||     +.+++++
T Consensus       195 ~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         195 YPPFFDDNPIQIYEKILEG-KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             CCCCCCCCHHHHHHHHhcC-CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence               4444555555555544 4567788899999999999999999999     6666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.29  E-value=1.8e-12  Score=99.27  Aligned_cols=142  Identities=9%  Similarity=-0.027  Sum_probs=87.6

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCCc
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~gl   84 (189)
                      +.|+|+++++......+..+||+|+++++. +    ..                 ++... ..+....+..+..+.+.|+
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~l~~~~~~l~~~~~~~~~~qi~~aL  115 (330)
T cd05601          58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGD-L----LS-----------------LLNRYEDQFDEDMAQFYLAELVLAI  115 (330)
T ss_pred             CCCCCCcceeeEEecCCeEEEEECCCCCCC-H----HH-----------------HHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            455666665554444445566666665421 1    11                 22211 2333444444556777788


Q ss_pred             eeeccCCcccccc-cc---------------ccc----------------------ccCC-------CCCccc-e-EEEe
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV----------------------HGTN-------LSGVVV-S-AVDF  117 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~-------~~~~~~-s-Vwsf  117 (189)
                      .++|..+++|+|+ |+               |++                      +|..       ...++. + ||||
T Consensus       116 ~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl  195 (330)
T cd05601         116 HSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSL  195 (330)
T ss_pred             HHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecc
Confidence            8888888888885 44               222                      1111       345778 9 9999


Q ss_pred             c------------CCCCChHHHHHHHHcCCC-C--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         118 G------------SGGMTNAEVLHQVEHGYR-M--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v~~g~~-~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |            |.+.+..+....+....+ +  +.+...+.++.+|+..|+. ||++|||+.+++.
T Consensus       196 G~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         196 GVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             cceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            9            445555566666654332 2  2234578999999999997 9999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.28  E-value=1e-12  Score=97.45  Aligned_cols=145  Identities=11%  Similarity=0.083  Sum_probs=91.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..++|.++... +.    +..                 ++.....+....+..+..+.+.|
T Consensus        58 ~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~~~~ql~~a  115 (268)
T cd06630          58 ARLNHPHIIRMLGATCEDSHFNLFVEWMAG-GS----VSH-----------------LLSKYGAFKEAVIINYTEQLLRG  115 (268)
T ss_pred             HHcCCCceehhhceeccCCeEEEEEeccCC-Cc----HHH-----------------HHHHhCCCCHHHHHHHHHHHHHH
Confidence            356788888888877666677888887765 31    111                 11112223344455555666677


Q ss_pred             ceeeccCCcccccc-cc-----------------------------------------cccccC-CCCCccc-e-EEEec
Q psy1684          84 LCVNLRKPCVQVSC-RI-----------------------------------------YLVHGT-NLSGVVV-S-AVDFG  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~-----------------------------------------~l~~~~-~~~~~~~-s-VwsfG  118 (189)
                      +.++|..+++|+|+ |.                                         ++++|. ....++. + |||+|
T Consensus       116 l~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG  195 (268)
T cd06630         116 LSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVG  195 (268)
T ss_pred             HHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHH
Confidence            77777777777764 32                                         111111 2245778 8 99999


Q ss_pred             ------------CCCCC---hHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------------SGGMT---NAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------------~~~~~---~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                  |....   ....+..+ .....+..|...++++.+++.+||..||++||++.++++
T Consensus       196 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         196 CVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence                        22211   12233233 233445667788999999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.28  E-value=9.9e-13  Score=97.63  Aligned_cols=103  Identities=11%  Similarity=0.078  Sum_probs=68.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc------------------------ccC-
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV------------------------HGT-  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~------------------------~~~-  105 (189)
                      .+.......+..+.+.|+.++|..+++|+|+ |.               +++                        +|. 
T Consensus       102 ~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (266)
T cd06651         102 ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVI  181 (266)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHh
Confidence            3444444556667777888888888888875 33               221                        111 


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ....++. + |||||            |.+....+.+... ..+..+..|..+++.+..++ +||..+|++||+|++|++
T Consensus       182 ~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         182 SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            2344688 8 99999            4444333333333 34445666778889999998 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.27  E-value=6.2e-13  Score=99.52  Aligned_cols=104  Identities=13%  Similarity=0.169  Sum_probs=67.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc---------------------cccC-C-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-N-L  107 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~-~  107 (189)
                      .+....+.....+.+.|+.++|..+++|+|+ |.               ++                     ++|. . .
T Consensus        96 ~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  175 (286)
T cd07847          96 GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCC
Confidence            3445566667777888888999888888875 33               11                     1111 1 2


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHc--------------------CCCCCCC----------CCC
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--------------------GYRMPCP----------PGC  143 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--------------------g~~~~~p----------~~~  143 (189)
                      ..++. + |||||            |.+.+..+....+..                    +...+.|          +..
T Consensus       176 ~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (286)
T cd07847         176 TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNI  255 (286)
T ss_pred             CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccC
Confidence            34788 8 99999            455554443333211                    1111111          245


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +..+.+|+.+||+.||++||++.+++.
T Consensus       256 ~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         256 SSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             CHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            788999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.27  E-value=1.4e-12  Score=99.89  Aligned_cols=101  Identities=11%  Similarity=-0.051  Sum_probs=70.4

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------cC-C
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-N  106 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~  106 (189)
                      ...+.......+..+.+.|+.++|..+++|+|+ |+               |++.                     |. .
T Consensus        90 ~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  169 (327)
T cd05617          90 QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILR  169 (327)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHC
Confidence            334555666667778888999999999999986 44               2222                     11 3


Q ss_pred             CCCccc-e-EEEec------------CC------CCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         107 LSGVVV-S-AVDFG------------SG------GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~------~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      ...++. + |||||            |.      ..+..+.............|...+..+.+++.+|++.||++|+++
T Consensus       170 ~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         170 GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            456888 9 99999            32      122233333333333455788899999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.27  E-value=1.7e-12  Score=101.14  Aligned_cols=106  Identities=8%  Similarity=-0.052  Sum_probs=70.9

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc----------------------cC-C
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH----------------------GT-N  106 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~----------------------~~-~  106 (189)
                      ..+....+..+..+.+.|+.++|..+++|+|+ |+               |++.                      |. .
T Consensus        98 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (372)
T cd07853          98 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM  177 (372)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHc
Confidence            34555666667778888999999999999986 44               2221                      11 1


Q ss_pred             C-CCccc-e-EEEec------------CCCCChHHHHHHHHc------------------------CCCC-------CCC
Q psy1684         107 L-SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH------------------------GYRM-------PCP  140 (189)
Q Consensus       107 ~-~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~------------------------g~~~-------~~p  140 (189)
                      + ..++. + |||||            |.+.++.+.+..+.+                        ...+       ...
T Consensus       178 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (372)
T cd07853         178 GSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLS  257 (372)
T ss_pred             CCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccC
Confidence            1 34788 8 99999            555544433333211                        1111       122


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ...++++.+|+.+|++.||++|||+.+++..
T Consensus       258 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         258 SQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             CCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            3567899999999999999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.27  E-value=8.4e-13  Score=98.88  Aligned_cols=102  Identities=15%  Similarity=0.058  Sum_probs=69.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CCCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSG  109 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~  109 (189)
                      +.......+..+.+.|+.++|..+++|+|+ |.               +++                     +|. ....
T Consensus        94 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  173 (280)
T cd05608          94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE  173 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCC
Confidence            445566667778888999999999999986 43               222                     111 3456


Q ss_pred             ccc-e-EEEec------------CCCCC----hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHH
Q psy1684         110 VVV-S-AVDFG------------SGGMT----NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFE  166 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~----~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~  166 (189)
                      ++. + |||||            |.+..    ..++...+..+ ....|..+|.++.+++.+||+.||++||     +++
T Consensus       174 ~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~  252 (280)
T cd05608         174 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCD  252 (280)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence            788 9 99999            33322    12233333222 2445678999999999999999999999     455


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      ++++
T Consensus       253 ~~l~  256 (280)
T cd05608         253 GLRT  256 (280)
T ss_pred             HHhc
Confidence            6654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.27  E-value=3e-12  Score=98.15  Aligned_cols=109  Identities=17%  Similarity=0.007  Sum_probs=73.9

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------  103 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------  103 (189)
                      ++.....+...++..+..+.+.|+.++|...++|+|+ |+               |++.                     
T Consensus        95 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~a  174 (332)
T cd05614          95 HLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMA  174 (332)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccC
Confidence            3433444555566667778888999999999999986 44               2222                     


Q ss_pred             -cC-CC-CCccc-e-EEEec------------CCCC----ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q psy1684         104 -GT-NL-SGVVV-S-AVDFG------------SGGM----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       104 -~~-~~-~~~~~-s-VwsfG------------~~~~----~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                       |. .. ..++. + |||||            |...    ...++...+.. ..++.|...++.+.+++.+||+.||++|
T Consensus       175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R  253 (332)
T cd05614         175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPKKR  253 (332)
T ss_pred             HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHHHc
Confidence             11 12 23678 8 99999            3211    12334344433 3456778899999999999999999999


Q ss_pred             C-----CHHHHHH
Q psy1684         163 P-----TFETLQW  170 (189)
Q Consensus       163 P-----~~~~i~~  170 (189)
                      |     +++++++
T Consensus       254 ~~~~~~~~~~~l~  266 (332)
T cd05614         254 LGAGPQGASEIKE  266 (332)
T ss_pred             CCCCCCCHHHHHc
Confidence            9     6677765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.26  E-value=6.5e-13  Score=99.87  Aligned_cols=102  Identities=14%  Similarity=0.009  Sum_probs=69.1

Q ss_pred             CHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-C-CCC
Q psy1684          69 HYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-N-LSG  109 (189)
Q Consensus        69 ~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~-~~~  109 (189)
                      ....+..+..+.+.|+.++|..+++|+|+ |+               |++                     +|. . ...
T Consensus       101 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  180 (288)
T cd07871         101 SMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTE  180 (288)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcc
Confidence            35666667778888999999999999986 44               222                     221 1 245


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCC------------------CC-----------CCCCCHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM------------------PC-----------PPGCPPR  146 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~------------------~~-----------p~~~p~~  146 (189)
                      ++. + |||+|            |.+.+..+.+..+......                  ..           ...++.+
T Consensus       181 ~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (288)
T cd07871         181 YSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTD  260 (288)
T ss_pred             cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHH
Confidence            788 9 99999            5555544444333211000                  00           1245778


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         147 LYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       147 ~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+|+.+|+..||.+|||++|+++
T Consensus       261 ~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         261 GIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHHHHhcCcCcccCCCHHHHhc
Confidence            999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=1.6e-12  Score=95.55  Aligned_cols=104  Identities=20%  Similarity=0.312  Sum_probs=74.2

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC-CCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLS  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~  108 (189)
                      .+....+..+..+...++.++|..+++|+|+ |.                                    ++++|. ...
T Consensus        95 ~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  174 (254)
T cd06627          95 PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS  174 (254)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCC
Confidence            3445555666777788888999999999886 43                                    111111 223


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||+|            +.+.+.......+..+..++.|..++.++.+++.+||..+|++|||+.+++.
T Consensus       175 ~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         175 GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            3577 8 99999            3344444444455556666778889999999999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.26  E-value=4.4e-12  Score=95.83  Aligned_cols=145  Identities=8%  Similarity=0.032  Sum_probs=94.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+...+..++|.|+.++ +.+    ..                 ++. ...+....+..+..+...|
T Consensus        73 ~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~-~~L----~~-----------------~~~-~~~~~~~~~~~~~~qi~~~  129 (297)
T cd06659          73 RDYQHQNVVEMYKSYLVGEELWVLMEFLQG-GAL----TD-----------------IVS-QTRLNEEQIATVCESVLQA  129 (297)
T ss_pred             HhCCCCchhhhhhheeeCCeEEEEEecCCC-CCH----HH-----------------HHh-hcCCCHHHHHHHHHHHHHH
Confidence            457899999999877777778888888776 311    11                 010 1123344455555666677


Q ss_pred             ceeeccCCcccccc-cc---------------c---------------------ccccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------Y---------------------LVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~---------------------l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+               +                     +++|. ....++. + |||||     
T Consensus       130 L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e  209 (297)
T cd06659         130 LCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIE  209 (297)
T ss_pred             HHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence            77777777777765 33               1                     11211 3345788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |...+..+....+.....  ...+...+.++.+++.+||+.+|.+||++++|+..
T Consensus       210 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         210 MVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence                   334444455555543321  22334678899999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.26  E-value=1.6e-12  Score=97.28  Aligned_cols=63  Identities=17%  Similarity=0.177  Sum_probs=44.8

Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM-PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~-~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..++. + |||||            |.+..+.+....+.....+ ..+..+|.++.+||.+||+.||.+||++.+|++
T Consensus       201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             cCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            45888 9 99999            3344433333333333222 233468999999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.25  E-value=1.6e-12  Score=97.36  Aligned_cols=144  Identities=13%  Similarity=0.033  Sum_probs=85.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+......++|+|+... +     +..                 ++..  ...+.......+..+.+
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~-~-----l~~-----------------~~~~~~~~~l~~~~~~~~~~~i~  110 (284)
T cd07860          54 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-D-----LKK-----------------FMDASPLSGIPLPLIKSYLFQLL  110 (284)
T ss_pred             HhcCCCCCcchhhhcccCCcEEEEeecccc-C-----HHH-----------------HHHhCCCCCCCHHHHHHHHHHHH
Confidence            456788888888877767777888887643 2     111                 1110  12233445555566666


Q ss_pred             CCceeeccCCcccccc-cc------------------------------------cccccC-CC-CCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NL-SGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~-~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..+++|+|+ |.                                    ++++|. .. ..++. + |||||  
T Consensus       111 ~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  190 (284)
T cd07860         111 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI  190 (284)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence            6777777777777664 22                                    122332 12 23577 8 99999  


Q ss_pred             ----------CCCCChHHHHHHH-HcCCCC---------------------------CCCCCCCHHHHHHHHHhcccCCC
Q psy1684         119 ----------SGGMTNAEVLHQV-EHGYRM---------------------------PCPPGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v-~~g~~~---------------------------~~p~~~p~~~~~l~~~C~~~~p~  160 (189)
                                |.+-+..+....+ .....+                           ...+.+++++.+++.+||+.||+
T Consensus       191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  270 (284)
T cd07860         191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPN  270 (284)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcc
Confidence                      3333322222221 111000                           01134678899999999999999


Q ss_pred             CCCCHHHHHH
Q psy1684         161 KRPTFETLQW  170 (189)
Q Consensus       161 ~RP~~~~i~~  170 (189)
                      +|||+++++.
T Consensus       271 ~Rpt~~~~l~  280 (284)
T cd07860         271 KRISAKAALA  280 (284)
T ss_pred             cCCCHHHHhc
Confidence            9999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.25  E-value=2e-12  Score=98.87  Aligned_cols=103  Identities=16%  Similarity=0.050  Sum_probs=76.9

Q ss_pred             cCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------c
Q psy1684          62 KAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------G  104 (189)
Q Consensus        62 l~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------~  104 (189)
                      +.....+.......+..+.+.|+.++|..+++|+|+ |+               |++.                     |
T Consensus        92 ~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  171 (324)
T cd05587          92 IQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPE  171 (324)
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChh
Confidence            333344555556667778889999999999999986 54               2222                     1


Q ss_pred             C-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         105 T-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       105 ~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      . ....++. + |||||            |.+.+..++...+..+ .+..|...++++.+++.+||..||.+|++.
T Consensus       172 ~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         172 IIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH-NVSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             hhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            1 3345788 9 99999            6666677777777554 356678899999999999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.25  E-value=1.5e-12  Score=99.64  Aligned_cols=38  Identities=21%  Similarity=0.380  Sum_probs=30.8

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHHHhh
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK--LEDFFTM  178 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~--l~~~~~~  178 (189)
                      ..++.++.+|+.+||..||++|||+.++++.  ++.+...
T Consensus       278 ~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         278 KTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             hhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence            3466789999999999999999999999753  5555543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.25  E-value=5.9e-13  Score=103.17  Aligned_cols=71  Identities=6%  Similarity=-0.055  Sum_probs=47.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+......++|.++... +     +..                 ++.. ...+....+..+..+++.
T Consensus       112 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  168 (357)
T PHA03209        112 QNVNHPSVIRMKDTLVSGAITCMVLPHYSS-D-----LYT-----------------YLTKRSRPLPIDQALIIEKQILE  168 (357)
T ss_pred             HhCCCCCCcChhheEEeCCeeEEEEEccCC-c-----HHH-----------------HHHhccCCCCHHHHHHHHHHHHH
Confidence            456788888877766555556677665532 1     111                 2211 223456667777888889


Q ss_pred             CceeeccCCcccccc
Q psy1684          83 GLCVNLRKPCVQVSC   97 (189)
Q Consensus        83 gl~~~~~~~~~~~~~   97 (189)
                      |+.++|..+++|+|+
T Consensus       169 aL~~LH~~~ivHrDl  183 (357)
T PHA03209        169 GLRYLHAQRIIHRDV  183 (357)
T ss_pred             HHHHHHHCCeecCCC
Confidence            999999999999986

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.24  E-value=2.7e-12  Score=96.06  Aligned_cols=30  Identities=20%  Similarity=0.238  Sum_probs=26.7

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +..+.++.+++.+||+.||++|||+++++.
T Consensus       250 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         250 PNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            356688999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=1.7e-12  Score=96.41  Aligned_cols=101  Identities=15%  Similarity=0.168  Sum_probs=66.4

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccC------C
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGT------N  106 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~------~  106 (189)
                      ...+..+..+.+.++.++|...++|+|+ |.                                    ++++|.      .
T Consensus       112 ~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  191 (275)
T cd06608         112 EEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQP  191 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccc
Confidence            4444555566667777777777777764 33                                    122221      1


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |.+.+.......+..+...  ..+...+.++.+|+.+||..||++|||+.+|++
T Consensus       192 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         192 DASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            234788 9 99999            4444444444445444332  223457889999999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.24  E-value=5.4e-12  Score=92.57  Aligned_cols=140  Identities=12%  Similarity=0.013  Sum_probs=91.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|+.+++.........++|+++... +.    +..                 ++.....+...++.....+.+.|+
T Consensus        49 ~l~h~~i~~~~~~~~~~~~~~~v~e~~~~-~~----L~~-----------------~l~~~~~l~~~~~~~~~~qi~~~l  106 (250)
T cd05123          49 RINHPFIVKLHYAFQTEEKLYLVLEYAPG-GE----LFS-----------------HLSKEGRFSEERARFYAAEIVLAL  106 (250)
T ss_pred             HcCCCcHHHHHHHeecCCeeEEEEecCCC-Cc----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            56788888888776666677888887764 31    111                 222222233444555555666677


Q ss_pred             eeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|...++|.|+ |.                                    ++++|. .....+. + |||||      
T Consensus       107 ~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l  186 (250)
T cd05123         107 EYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEM  186 (250)
T ss_pred             HHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHH
Confidence            7777777777664 32                                    111211 2334677 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                            |...+..++...+.. ..++.|...|.++.+++.+||..||++||++++
T Consensus       187 ~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         187 LTGKPPFYAEDRKEIYEKILK-DPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence                  444444556666655 456788888999999999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.24  E-value=4.7e-13  Score=101.08  Aligned_cols=101  Identities=9%  Similarity=-0.027  Sum_probs=65.9

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc---------------------cccC-CCCCcc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-NLSGVV  111 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~~~~~~  111 (189)
                      ..++..+..+.+.|+.++|..+++|+|+ |.               ++                     ++|. ....++
T Consensus       114 ~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  193 (297)
T cd06656         114 EGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG  193 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCC
Confidence            4445555566667788888888888875 33               11                     1111 234577


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      . + |||||            |.+.+..+....+..+..+  ..|...+..+.+++.+||..||++||++++|++
T Consensus       194 ~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            8 8 99999            3333332222223222222  245678899999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.24  E-value=5e-12  Score=96.68  Aligned_cols=100  Identities=14%  Similarity=0.069  Sum_probs=75.0

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccccc---------------------C-C
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHG---------------------T-N  106 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~---------------------~-~  106 (189)
                      ...+...+...+..+.+.|+.++|..+++|+|+ |+               |+++.                     . .
T Consensus        95 ~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05615          95 VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIA  174 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHc
Confidence            334555666677778888999999999999986 44               22221                     1 3


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      ...++. + |||||            |.+.+..++...+..+ ....|..++.++.+++.+|++.||++|++.
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         175 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH-NVSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            455788 9 99999            6666677777777554 345678899999999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.24  E-value=1.4e-12  Score=99.31  Aligned_cols=102  Identities=12%  Similarity=0.058  Sum_probs=67.5

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc--------------------------------cccccC----CCCCccc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------YLVHGT----NLSGVVV  112 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------~l~~~~----~~~~~~~  112 (189)
                      ..++..+..+.+.++.++|..+++|+|+ |.                                ++++|.    ..+.++.
T Consensus       120 ~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  199 (313)
T cd06633         120 EVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDG  199 (313)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCc
Confidence            4445555666677777778777777765 33                                222332    1345788


Q ss_pred             -e-EEEec------------CCCCChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         113 -S-AVDFG------------SGGMTNAEVLHQVEHGYRMPC-PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       113 -s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~-p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                       + |||||            |.+.+.......+..+..+.. ....+..+.+++.+||+.+|.+||++.+++..
T Consensus       200 ~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             9 99999            334444444444433333322 34577889999999999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.23  E-value=9.3e-13  Score=99.96  Aligned_cols=103  Identities=14%  Similarity=0.032  Sum_probs=68.8

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC--CCC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT--NLS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~--~~~  108 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               |++                     +|.  ...
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  180 (309)
T cd07872         101 MSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSS  180 (309)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCC
Confidence            335556666778888999999999999986 44               211                     111  123


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCC---------------------C--------CCCCCCCH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR---------------------M--------PCPPGCPP  145 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~---------------------~--------~~p~~~p~  145 (189)
                      .++. + |||||            |.+.+..+....+.+...                     +        .....+++
T Consensus       181 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (309)
T cd07872         181 EYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDT  260 (309)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCH
Confidence            5788 9 99999            555554443333321100                     0        01124678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         146 RLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       146 ~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++.+|+.+|+..||.+|||+.|+++
T Consensus       261 ~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         261 EGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             HHHHHHHHhccCChhhCCCHHHHhc
Confidence            9999999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.23  E-value=2.2e-12  Score=98.00  Aligned_cols=72  Identities=6%  Similarity=-0.117  Sum_probs=45.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.....+..++++|+++.+.     +..                 ++..  ...+....+..+..+.+
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~-----l~~-----------------~l~~~~~~~~~~~~~~~~~~~l~  111 (314)
T cd08216          54 RQLQHPNILPYVTSFIVDSELYVVSPLMAYGS-----CED-----------------LLKTHFPEGLPELAIAFILKDVL  111 (314)
T ss_pred             HhcCCcchhhhhheeecCCeEEEEEeccCCCC-----HHH-----------------HHHHhcccCCCHHHHHHHHHHHH
Confidence            35678999998887666667788888877622     111                 1111  11223334445556777


Q ss_pred             CCceeeccCCcccccc
Q psy1684          82 DGLCVNLRKPCVQVSC   97 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~   97 (189)
                      .|+.++|..+++|+|+
T Consensus       112 ~~L~~LH~~~ivH~dl  127 (314)
T cd08216         112 NALDYIHSKGFIHRSV  127 (314)
T ss_pred             HHHHHHHHCCeecCCC
Confidence            7888888888888875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.23  E-value=5.3e-12  Score=91.73  Aligned_cols=144  Identities=16%  Similarity=0.106  Sum_probs=90.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|++++++++.+......++|+|+...+.     +..                 ++.....+....+.....+...++
T Consensus        43 ~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~l~~~l  100 (244)
T smart00220       43 KLKHPNIVRLYDVFEDEDKLYLVMEYCDGGD-----LFD-----------------LLKKRGRLSEDEARFYARQILSAL  100 (244)
T ss_pred             hCCCCcHHHHHhheeeCCEEEEEEeCCCCCC-----HHH-----------------HHHhccCCCHHHHHHHHHHHHHHH
Confidence            4678899998888776677888888776622     111                 111111123344444445555566


Q ss_pred             eeeccCCccccccc-c-----------------------------------cccccC-CCCCccc-e-EEEec-------
Q psy1684          85 CVNLRKPCVQVSCR-I-----------------------------------YLVHGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~p-~-----------------------------------~l~~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      .++|...++|.++. .                                   ++++|. ....++. + |||||       
T Consensus       101 ~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~  180 (244)
T smart00220      101 EYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELL  180 (244)
T ss_pred             HHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            66666666665542 1                                   122222 2355788 8 99999       


Q ss_pred             -----CCC-CChHHHHHHHHcCCCCCCCCC--CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -----SGG-MTNAEVLHQVEHGYRMPCPPG--CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -----~~~-~~~~~~~~~v~~g~~~~~p~~--~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                           |.. .+...+...+..+.....+..  ++.++.+++.+||..+|++||++.++++
T Consensus       181 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      181 TGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             hCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence                 333 344555555555544433333  8999999999999999999999999985

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.23  E-value=1.3e-12  Score=98.27  Aligned_cols=61  Identities=16%  Similarity=0.171  Sum_probs=44.8

Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++. + |||||            |...+..+.+..+.++..+  ..|...+.++.+++.+||+.||++||++.+|+.
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            678 9 99999            4444444444444444332  235567789999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.22  E-value=1.8e-12  Score=97.08  Aligned_cols=29  Identities=17%  Similarity=0.127  Sum_probs=26.4

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .+++++.+++.+||+.||.+|||++++++
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            46788999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.21  E-value=1.9e-12  Score=97.26  Aligned_cols=148  Identities=14%  Similarity=-0.010  Sum_probs=84.9

Q ss_pred             CCChHHHHHHhcCCCCC--CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPEND--HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~--~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+...  ...+||+|+++++. +    ..    .+..         .......+....+..+..+.+.
T Consensus        55 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~-L----~~----~l~~---------~~~~~~~l~~~~~~~i~~~i~~  116 (287)
T cd06621          55 SCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGS-L----DS----IYKK---------VKKRGGRIGEKVLGKIAESVLK  116 (287)
T ss_pred             hCCCCCeeeeeeEEEccCCCeEEEEEEecCCCC-H----HH----HHHH---------HHhcCCCCCHHHHHHHHHHHHH
Confidence            46677777776654322  23567777766522 1    11    0000         0000122334445555666777


Q ss_pred             CceeeccCCcccccc-cc---------------cc-------------------cccC-CCCCccc-e-EEEec------
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL-------------------VHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l-------------------~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      ++.++|..+++|+|+ |.               ++                   ++|. ....++. + |||+|      
T Consensus       117 ~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l  196 (287)
T cd06621         117 GLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV  196 (287)
T ss_pred             HHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence            777888777777765 22               11                   1221 3456888 9 99999      


Q ss_pred             ------CCCC-----ChHHHHHHHHcCCCCCCCC------CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGM-----TNAEVLHQVEHGYRMPCPP------GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~-----~~~~~~~~v~~g~~~~~p~------~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            |...     ...++...+.....+..+.      ..++++.+++.+||..||++|||+.||++
T Consensus       197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence                  2221     2234444444333222221      24578999999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0790|consensus

Probab=99.21  E-value=5.9e-11  Score=90.74  Aligned_cols=80  Identities=33%  Similarity=0.517  Sum_probs=67.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-------CCCeeeEEEEEeccCC-ccCCCCCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-------SSFCLKMTTGRSLFET-QKAGRTTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-------~~~~v~h~~i~~~~~g-yl~~~~~~~-l~   71 (189)
                      ||||.|+-.+|++||...+ .+|+||||||.+.+|+|+||++..       ...+|.|..|.+..+- -+.+...|. +.
T Consensus       112 WfHG~LsgkeAekLl~ekg-k~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~slt  190 (600)
T KOG0790|consen  112 WFHGHLSGKEAEKLLQEKG-KHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFDSLT  190 (600)
T ss_pred             hhccCCCchhHHHHHHhcC-CCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccchHH
Confidence            9999999999999885443 579999999999999999999983       2248999999876644 455667899 99


Q ss_pred             HHHHHhhhcc
Q psy1684          72 ELVEHYSKDA   81 (189)
Q Consensus        72 ~li~~~~~~a   81 (189)
                      +|+++|.++.
T Consensus       191 dLidhykknp  200 (600)
T KOG0790|consen  191 DLVEHYKKNP  200 (600)
T ss_pred             HHHHHhccCc
Confidence            9999998874

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.21  E-value=1.5e-12  Score=97.41  Aligned_cols=30  Identities=17%  Similarity=0.135  Sum_probs=27.1

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+++++.++|.+||..||++|||+.+|++
T Consensus       252 ~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         252 KNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            357889999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.21  E-value=1.7e-12  Score=97.56  Aligned_cols=103  Identities=12%  Similarity=-0.041  Sum_probs=70.7

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~  110 (189)
                      +...++..+..+.+.|+.++|..+++|+|+ |.               +++                    +|. ....+
T Consensus        99 l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  178 (285)
T cd05630          99 FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY  178 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCC
Confidence            445566667778888999999999999885 43               211                    111 34558


Q ss_pred             cc-e-EEEec------------CCCCCh---HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTN---AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETL  168 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~---~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i  168 (189)
                      +. + |||||            |.+...   .+....+........+..+++++.+|+.+||+.||++|||     +.++
T Consensus       179 ~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~  258 (285)
T cd05630         179 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREV  258 (285)
T ss_pred             CCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHH
Confidence            88 9 99999            333221   1222233223334456788999999999999999999999     7788


Q ss_pred             HH
Q psy1684         169 QW  170 (189)
Q Consensus       169 ~~  170 (189)
                      ++
T Consensus       259 ~~  260 (285)
T cd05630         259 KE  260 (285)
T ss_pred             Hc
Confidence            76

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.21  E-value=2.2e-12  Score=95.54  Aligned_cols=62  Identities=24%  Similarity=0.254  Sum_probs=44.7

Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCP-----PGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p-----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      .++. + |||||            |.+.+..+....+..+..+..+     ...++++.+++.+||..||++||++++|+
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll  262 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELL  262 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            5788 9 99999            4444444444444333222222     25678999999999999999999999987


Q ss_pred             H
Q psy1684         170 W  170 (189)
Q Consensus       170 ~  170 (189)
                      +
T Consensus       263 ~  263 (267)
T cd06610         263 K  263 (267)
T ss_pred             h
Confidence            5

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.21  E-value=4.9e-12  Score=94.64  Aligned_cols=99  Identities=14%  Similarity=0.109  Sum_probs=62.4

Q ss_pred             HHHHhhhccCCceeeccCCcccccc-cc----------------------------------cccccC-CCCCccc-e-E
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQVSC-RI----------------------------------YLVHGT-NLSGVVV-S-A  114 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------------------------~l~~~~-~~~~~~~-s-V  114 (189)
                      +..+..+.+.|+.++|..+++|+|+ |.                                  ++++|. ....++. + |
T Consensus        97 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  176 (279)
T cd06619          97 LGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDV  176 (279)
T ss_pred             HHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchH
Confidence            3445556666777777777777764 32                                  222332 3455788 9 9


Q ss_pred             EEec------------CCCC-------ChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         115 VDFG------------SGGM-------TNAEVLHQVEHGYRMPC-PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       115 wsfG------------~~~~-------~~~~~~~~v~~g~~~~~-p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ||||            |...       ...+....+.....+.. ....++++.+++.+||+.||++||++.++++.
T Consensus       177 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         177 WSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            9999            2111       11223333333322222 23467899999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG2345|consensus

Probab=99.21  E-value=3.2e-12  Score=91.37  Aligned_cols=155  Identities=15%  Similarity=0.156  Sum_probs=98.2

Q ss_pred             CCCCChHHHHHHhcCCCCCCC-----cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHh
Q psy1684           3 FGKIKRIEAEKKLLLPENDHG-----AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHY   77 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g-----~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~   77 (189)
                      |+++.|+|+.+++..+..+.+     .||+.++-.. |    |+.+    .+...    ..+     +..++-.+.+.++
T Consensus        72 ~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~-G----sl~d----~i~~~----k~k-----g~~~sE~~iL~if  133 (302)
T KOG2345|consen   72 HRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKR-G----SLLD----EIERL----KIK-----GNFVSEAQILWIF  133 (302)
T ss_pred             HHhhCCcchHHHHHHHHHhhccCceeEEEEeehhcc-c----cHHH----HHHHH----hhc-----CCccCHHHHHHHH
Confidence            567788888888765544433     5666665554 2    1222    01000    111     2233466778888


Q ss_pred             hhccCCceeeccCC--cccccc-cccc--cccC-----------------------------------------------
Q psy1684          78 SKDADGLCVNLRKP--CVQVSC-RIYL--VHGT-----------------------------------------------  105 (189)
Q Consensus        78 ~~~a~gl~~~~~~~--~~~~~~-p~~l--~~~~-----------------------------------------------  105 (189)
                      ..+.+|+.++|...  .+|+|+ |..+  +.+.                                               
T Consensus       134 ~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk  213 (302)
T KOG2345|consen  134 LGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK  213 (302)
T ss_pred             HHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc
Confidence            89999999999875  899996 5511  1101                                               


Q ss_pred             CCCCccc-e-EEEec------CCCCChHHHHHH--------HHcCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         106 NLSGVVV-S-AVDFG------SGGMTNAEVLHQ--------VEHGYRMPCP--PGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------~~~~~~~~~~~~--------v~~g~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                      .+...++ + |||+|      .-+.++.+-...        |.++ ...+|  ...+..+.+|++.|++.||.+||+..+
T Consensus       214 ~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~-q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~  292 (302)
T KOG2345|consen  214 SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNA-QISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPE  292 (302)
T ss_pred             cCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecc-ccccCCCCCccHHHHHHHHHHhcCCcccCCCHHH
Confidence            4556788 8 99999      223334332221        2222 23344  347789999999999999999999999


Q ss_pred             HHHHHHHHH
Q psy1684         168 LQWKLEDFF  176 (189)
Q Consensus       168 i~~~l~~~~  176 (189)
                      ++..++.+.
T Consensus       293 ll~~~d~Li  301 (302)
T KOG2345|consen  293 LLSKLDDLI  301 (302)
T ss_pred             HHHHHHhhc
Confidence            999987653

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.20  E-value=2.6e-12  Score=96.21  Aligned_cols=30  Identities=23%  Similarity=0.310  Sum_probs=26.9

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+|.++.++|.+||..||++|||+++|++
T Consensus       255 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         255 GKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             CccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            346899999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.20  E-value=1.6e-12  Score=110.17  Aligned_cols=62  Identities=13%  Similarity=0.100  Sum_probs=45.9

Q ss_pred             CCccc-e-EEEec------------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..++. + |||||            |...+ ..+++..+..+..++. ...+.++.+||..||..+|.+||++.+++.
T Consensus       218 ~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        218 KSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            34788 9 99999            33332 3445555555543332 457899999999999999999999999985

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.20  E-value=1.2e-11  Score=98.38  Aligned_cols=105  Identities=11%  Similarity=0.024  Sum_probs=72.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------ccc--------------------ccC-C-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLV--------------------HGT-N-L  107 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~--------------------~~~-~-~  107 (189)
                      .+....+..+..+.+.|+.++|..+++|||+ |+                |++                    +|. . .
T Consensus       166 ~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~  245 (440)
T PTZ00036        166 ALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGA  245 (440)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCC
Confidence            4445566667778889999999999999986 54                222                    221 1 2


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHc--CC--------------------------CCCCCCCCCH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GY--------------------------RMPCPPGCPP  145 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~--------------------------~~~~p~~~p~  145 (189)
                      ..|+. + |||||            |.+.+..+.+..+..  |.                          +...|...|.
T Consensus       246 ~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~  325 (440)
T PTZ00036        246 TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPD  325 (440)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCH
Confidence            35888 9 99999            555544333333211  10                          1113456789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         146 RLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       146 ~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ++.+|+.+||..||.+|||+.+++..
T Consensus       326 ~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        326 DAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            99999999999999999999999854

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.20  E-value=6.9e-12  Score=94.16  Aligned_cols=103  Identities=14%  Similarity=-0.038  Sum_probs=71.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~  109 (189)
                      .+....++.+..+.+.|+.++|...++|+|+ |.               +++                    +|. ....
T Consensus        98 ~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~  177 (285)
T cd05632          98 GFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQR  177 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCC
Confidence            3556667777788888999999999999886 43               211                    111 3455


Q ss_pred             ccc-e-EEEec------------CCCCChHHHH----HHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVL----HQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FE  166 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~----~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~  166 (189)
                      ++. + |||||            |.+.+.....    ..+..+ ....+...+.++.+|+..||+.||++||+     +.
T Consensus       178 ~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~  256 (285)
T cd05632         178 YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAG  256 (285)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc-ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChH
Confidence            788 9 99999            4444433222    222222 23456678999999999999999999999     56


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +++.
T Consensus       257 ~l~~  260 (285)
T cd05632         257 EVKR  260 (285)
T ss_pred             HHHc
Confidence            6655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.20  E-value=3.5e-12  Score=93.71  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=71.2

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------------------------------cccccC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------------YLVHGT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------------~l~~~~-~  106 (189)
                      .++..++..+..+...++.++|...++|+|+ |.                                      ++++|. .
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606          97 KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhc
Confidence            4445556666677777888888888888875 33                                      111111 2


Q ss_pred             CCCccc-e-EEEec------------CCCCC-hHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMT-NAEVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~-~~~~~~~v~~-g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |.... .......+.. +..+..|...|.++.+++.+||+.||++||++.+++.
T Consensus       177 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         177 GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            233677 8 99999            33332 2333344433 4556678889999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.20  E-value=5.6e-12  Score=95.09  Aligned_cols=143  Identities=17%  Similarity=0.091  Sum_probs=84.0

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++.+......|+|+|+... ....+  ..                   .....+..........+.+.|+.+
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l--~~-------------------~~~~~l~~~~~~~i~~~i~~~l~~  129 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMST-CLDKL--LK-------------------RIQGPIPEDILGKMTVAIVKALHY  129 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccCc-CHHHH--HH-------------------HhcCCCCHHHHHHHHHHHHHHHHH
Confidence            478888888877666677888877542 10000  00                   001122223333444555666666


Q ss_pred             ecc-CCcccccc-cc-----------------------------------cccccCC-----CCCccc-e-EEEec----
Q psy1684          87 NLR-KPCVQVSC-RI-----------------------------------YLVHGTN-----LSGVVV-S-AVDFG----  118 (189)
Q Consensus        87 ~~~-~~~~~~~~-p~-----------------------------------~l~~~~~-----~~~~~~-s-VwsfG----  118 (189)
                      +|. .+++|+|+ |.                                   ++++|..     .+.++. + |||||    
T Consensus       130 lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  209 (296)
T cd06618         130 LKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLV  209 (296)
T ss_pred             HHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHH
Confidence            665 35666654 32                                   1222211     134788 9 99999    


Q ss_pred             --------CCCCC-hHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMT-NAEVLHQVEHGYRMPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~-~~~~~~~v~~g~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.... ..+++..+..+..+..|  ..++.++.+|+.+||+.||.+||++.+|+..
T Consensus       210 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         210 ELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                    32221 23445455444333333  3478999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.19  E-value=9.9e-12  Score=93.72  Aligned_cols=144  Identities=8%  Similarity=-0.012  Sum_probs=92.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..++|+|+.+.+. +    ..                 ++. ...+.......+..+...+
T Consensus        72 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-L----~~-----------------~~~-~~~~~~~~~~~~~~ql~~~  128 (292)
T cd06657          72 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGA-L----TD-----------------IVT-HTRMNEEQIAAVCLAVLKA  128 (292)
T ss_pred             HhcCCcchhheeeEEEeCCEEEEEEecCCCCc-H----HH-----------------HHh-cCCCCHHHHHHHHHHHHHH
Confidence            35678888888877666677888888877622 1    11                 110 1122334444555666667


Q ss_pred             ceeeccCCcccccc-cc------------------------------------cccccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |.                                    ++++|. ....++. + |||||     
T Consensus       129 l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~e  208 (292)
T cd06657         129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  208 (292)
T ss_pred             HHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence            77777777777764 33                                    111111 2345688 8 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |.+....+....+..+...  .....+|+++.+++.+||..||.+||++.+++.
T Consensus       209 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         209 MVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence                   4444445555555444322  233568899999999999999999999999887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.19  E-value=4.3e-12  Score=92.85  Aligned_cols=104  Identities=15%  Similarity=0.125  Sum_probs=68.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-ccc-----------------------------------ccccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIY-----------------------------------LVHGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~-----------------------------------l~~~~-~~~~  109 (189)
                      .+...++.....+.+.++.++|..+++|+|+ |..                                   +++|. ....
T Consensus        94 ~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  173 (253)
T cd05122          94 TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKP  173 (253)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCC
Confidence            3445555666677777888888888888875 331                                   11111 2234


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPP--GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~--~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++. + |||||            |...+..+..........+..+.  .++.++.+++.+||+.||++|||+.++++
T Consensus       174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         174 YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            678 8 99999            34443444444443333333333  34899999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.19  E-value=1.7e-11  Score=92.04  Aligned_cols=144  Identities=13%  Similarity=-0.001  Sum_probs=87.3

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++.+++........+||+|+..+ +.    +..                 ++.....+....+..+..+.+.++.+
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~~~~~~~~~~~~~~~~~~ql~~~l~~  120 (288)
T cd05583          63 RCPFLVTLHYAFQTDTKLHLILDYVNG-GE----LFT-----------------HLYQREHFTESEVRVYIAEIVLALDH  120 (288)
T ss_pred             CCcchhhhheeeecCCEEEEEEecCCC-Cc----HHH-----------------HHhhcCCcCHHHHHHHHHHHHHHHHH
Confidence            467777776655545556677777664 21    111                 22222233444455555666777778


Q ss_pred             eccCCccccccc-c---------------cc----------------------cccC-CCC--Cccc-e-EEEec-----
Q psy1684          87 NLRKPCVQVSCR-I---------------YL----------------------VHGT-NLS--GVVV-S-AVDFG-----  118 (189)
Q Consensus        87 ~~~~~~~~~~~p-~---------------~l----------------------~~~~-~~~--~~~~-s-VwsfG-----  118 (189)
                      +|..+++|+|+. .               ++                      ++|. ...  ..+. + |||||     
T Consensus       121 lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~e  200 (288)
T cd05583         121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFE  200 (288)
T ss_pred             HHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHH
Confidence            887777777753 2               11                      1111 111  2567 8 99999     


Q ss_pred             -------CCCC----ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 -------SGGM----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 -------~~~~----~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                             |...    ...++...+... .++.|..++.++++++.+||+.||++|||+.++...|+
T Consensus       201 l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         201 LLTGASPFTVDGEQNSQSEISRRILKS-KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             HHhCCCCcccCcccchHHHHHHHHHcc-CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence                   2111    122333333333 35667788999999999999999999999988876654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.19  E-value=4.2e-12  Score=99.57  Aligned_cols=111  Identities=11%  Similarity=0.013  Sum_probs=71.3

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------  103 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------  103 (189)
                      ++.....+...++..+..+.+.|+.++|..+++|+|+ |+               |++.                     
T Consensus       175 ~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~  254 (392)
T PHA03207        175 YVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETN  254 (392)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCcc
Confidence            3433344557777888888899999999999999996 44               2221                     


Q ss_pred             --cC-CCCCccc-e-EEEec------------CCCCCh---HHHHHHHH--------------------------cCCCC
Q psy1684         104 --GT-NLSGVVV-S-AVDFG------------SGGMTN---AEVLHQVE--------------------------HGYRM  137 (189)
Q Consensus       104 --~~-~~~~~~~-s-VwsfG------------~~~~~~---~~~~~~v~--------------------------~g~~~  137 (189)
                        |. ....|+. + |||||            |.+...   ...+..+.                          ...++
T Consensus       255 aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (392)
T PHA03207        255 SPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRP  334 (392)
T ss_pred             CHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccC
Confidence              11 2345788 9 99999            322211   11111111                          11111


Q ss_pred             CC--C-----CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         138 PC--P-----PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       138 ~~--p-----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.  |     ...+.++.++|.+|+..||.+|||+.+++..
T Consensus       335 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        335 PYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             CccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            11  1     1346788899999999999999999999865

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.19  E-value=2.1e-11  Score=91.15  Aligned_cols=143  Identities=13%  Similarity=0.107  Sum_probs=85.1

Q ss_pred             CCC-hHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhcc
Q psy1684           5 KIK-RIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~-~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a   81 (189)
                      .+. |+|++++++.+...+..++|+|+. . +.    +..                 ++...  ..+....++.+..+.+
T Consensus        53 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~-~~----l~~-----------------~~~~~~~~~~~~~~~~~~~~~l~  109 (283)
T cd07830          53 KLNEHPNIVKLKEVFRENDELYFVFEYM-E-GN----LYQ-----------------LMKDRKGKPFSESVIRSIIYQIL  109 (283)
T ss_pred             hccCCCCchhHHHHhhcCCcEEEEEecC-C-CC----HHH-----------------HHHhcccccCCHHHHHHHHHHHH
Confidence            455 888888888777777788888887 3 31    111                 11111  1233455555666667


Q ss_pred             CCceeeccCCccccccc-c-----------------------------------cccccC--CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSCR-I-----------------------------------YLVHGT--NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p-~-----------------------------------~l~~~~--~~~~~~~-s-VwsfG---  118 (189)
                      .++.++|...++|+|+. .                                   ++++|.  ....++. + |||||   
T Consensus       110 ~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l  189 (283)
T cd07830         110 QGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIM  189 (283)
T ss_pred             HHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHH
Confidence            77777777777777653 2                                   112221  1234678 8 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcC-CCC-----------------C-----------CCCCCCHHHHHHHHHhcccCCC
Q psy1684         119 ---------SGGMTNAEVLHQVEHG-YRM-----------------P-----------CPPGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g-~~~-----------------~-----------~p~~~p~~~~~l~~~C~~~~p~  160 (189)
                               |++.+..+....+... ..+                 .           ..+..+.++.+++.+||+.||+
T Consensus       190 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  269 (283)
T cd07830         190 AELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPK  269 (283)
T ss_pred             HHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcc
Confidence                     3333322222111110 000                 0           0112368899999999999999


Q ss_pred             CCCCHHHHHH
Q psy1684         161 KRPTFETLQW  170 (189)
Q Consensus       161 ~RP~~~~i~~  170 (189)
                      +|||++||+.
T Consensus       270 ~Rpt~~ei~~  279 (283)
T cd07830         270 KRPTASQALQ  279 (283)
T ss_pred             cCCCHHHHhh
Confidence            9999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.19  E-value=2.1e-12  Score=103.01  Aligned_cols=105  Identities=8%  Similarity=-0.035  Sum_probs=69.2

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~  106 (189)
                      .+....+..+..+++.|+.++|..+++|+|+ |+               |++.                       |. .
T Consensus       256 ~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~  335 (461)
T PHA03211        256 PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLA  335 (461)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHc
Confidence            3556777778888899999999999999996 44               2221                       11 3


Q ss_pred             CCCccc-e-EEEec-------------CCC-------CChHHHHHHHHcCCC--CCCCC---------------------
Q psy1684         107 LSGVVV-S-AVDFG-------------SGG-------MTNAEVLHQVEHGYR--MPCPP---------------------  141 (189)
Q Consensus       107 ~~~~~~-s-VwsfG-------------~~~-------~~~~~~~~~v~~g~~--~~~p~---------------------  141 (189)
                      ...++. + |||||             |..       ....++...+..+..  ...|.                     
T Consensus       336 ~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  415 (461)
T PHA03211        336 GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPA  415 (461)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCc
Confidence            345888 9 99999             111       112334433332210  00110                     


Q ss_pred             ----------CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 ----------GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ----------~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                                ..+.++.+|+.+|++.||.+|||+.|+++.
T Consensus       416 ~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        416 YTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             cCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                      234578899999999999999999999864

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.19  E-value=2.3e-12  Score=96.68  Aligned_cols=63  Identities=25%  Similarity=0.310  Sum_probs=42.9

Q ss_pred             Cccc-e-EEEec------------CCCCC-hHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMT-NAEVLHQVEHGYRMPCP----PGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~-~~~~~~~v~~g~~~~~p----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      .++. + |||||            |.... ..+.+..+..+..+..+    ..++.++.+|+.+||+.||++|||+.+|+
T Consensus       186 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~  265 (288)
T cd06616         186 GYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELL  265 (288)
T ss_pred             CCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            5888 9 99999            22222 11222223233322222    24789999999999999999999999998


Q ss_pred             HH
Q psy1684         170 WK  171 (189)
Q Consensus       170 ~~  171 (189)
                      +.
T Consensus       266 ~~  267 (288)
T cd06616         266 EH  267 (288)
T ss_pred             cC
Confidence            64

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.18  E-value=4.8e-12  Score=95.55  Aligned_cols=29  Identities=28%  Similarity=0.167  Sum_probs=26.7

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .+|..+.+++.+||+.||++|||+.+|+.
T Consensus       270 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         270 FIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            46899999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0592|consensus

Probab=99.18  E-value=4.7e-12  Score=99.18  Aligned_cols=119  Identities=12%  Similarity=0.014  Sum_probs=87.5

Q ss_pred             EEEEeccCC----ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cccccccC---------------------
Q psy1684          52 TTGRSLFET----QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVHGT---------------------  105 (189)
Q Consensus        52 ~~i~~~~~g----yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~~~---------------------  105 (189)
                      |.+....+|    ||..-..|.....--|..++.+++.|+|+.+|||||+ |+.+..+.                     
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence            334445555    6666566654444446677788999999999999996 77222111                     


Q ss_pred             -----------------------------CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCC
Q psy1684         106 -----------------------------NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPG  142 (189)
Q Consensus       106 -----------------------------~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~  142 (189)
                                                   ..+..+. + +|+||            |.+.+.--+.++|..- ..++|++
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l-~y~fp~~  309 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL-DYEFPEG  309 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh-cccCCCC
Confidence                                         3445567 8 99999            7777666666676543 3568899


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .|+.+.+|+.+-+..||++|.|.++|...
T Consensus       310 fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  310 FPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             CCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            99999999999999999999999988764

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.18  E-value=4.2e-12  Score=94.84  Aligned_cols=103  Identities=12%  Similarity=0.034  Sum_probs=67.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCccccccc-c----------------------------------cccccC--CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSCR-I----------------------------------YLVHGT--NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~p-~----------------------------------~l~~~~--~~~~~  110 (189)
                      +...++..+..+.+.|+.++|..+++|+|+. .                                  ++++|.  ..+.+
T Consensus        97 ~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (282)
T cd07831          97 LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYY  176 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCC
Confidence            4456666677777888888888888888653 2                                  223332  22346


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHc--CC---------------CCCC-----------CCCCCHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEH--GY---------------RMPC-----------PPGCPPRLY  148 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~---------------~~~~-----------p~~~p~~~~  148 (189)
                      +. + |||||            |++.+..+....+..  |.               ....           ...+|.++.
T Consensus       177 ~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (282)
T cd07831         177 GPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGL  256 (282)
T ss_pred             CcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHH
Confidence            78 8 99999            444443333332211  10               0011           125678999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHH
Q psy1684         149 DIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       149 ~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +|+.+||+.||++||++.++++
T Consensus       257 ~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         257 DLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHhccCcccccCHHHHhh
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.18  E-value=1.1e-11  Score=96.52  Aligned_cols=144  Identities=6%  Similarity=-0.095  Sum_probs=89.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++.........|||+|++++ |++    ..                 ++. +..++......+..+.+.|+
T Consensus        99 ~~~h~~iv~~~~~~~~~~~~~lv~Ey~~g-g~L----~~-----------------~l~-~~~l~~~~~~~~~~qi~~aL  155 (370)
T cd05596          99 HANSEWIVQLHYAFQDDKYLYMVMEYMPG-GDL----VN-----------------LMS-NYDIPEKWARFYTAEVVLAL  155 (370)
T ss_pred             hCCCCCcceEEEEEecCCEEEEEEcCCCC-CcH----HH-----------------HHH-hcCCCHHHHHHHHHHHHHHH
Confidence            45566666666555444556677777665 311    11                 111 11233333444455667788


Q ss_pred             eeeccCCcccccc-cc---------------cc----------------------cccC-----CCCCccc-e-EEEec-
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YL----------------------VHGT-----NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l----------------------~~~~-----~~~~~~~-s-VwsfG-  118 (189)
                      .++|..+++|+|+ |+               |+                      |+|.     ....++. + ||||| 
T Consensus       156 ~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGv  235 (370)
T cd05596         156 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  235 (370)
T ss_pred             HHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhH
Confidence            8888888888875 44               22                      2221     1224788 9 99999 


Q ss_pred             -----------CCCCChHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHG-YRMPCPP--GCPPRLYDIMLECWLKDPVK--RPTFETLQWK  171 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g-~~~~~p~--~~p~~~~~l~~~C~~~~p~~--RP~~~~i~~~  171 (189)
                                 |.+.+.......+..+ ..+..|.  .++.++.+|+.+|+..+|.+  ||++.++++.
T Consensus       236 ilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         236 FLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence                       5555555666666543 3344444  57899999999999999987  9999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.17  E-value=5.1e-12  Score=94.49  Aligned_cols=103  Identities=19%  Similarity=0.136  Sum_probs=68.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccC-Ccccccc-cc---------------cc--------------------cccCC----
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRK-PCVQVSC-RI---------------YL--------------------VHGTN----  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~-~~~~~~~-p~---------------~l--------------------~~~~~----  106 (189)
                      +....+..+..+.+.|+.++|.. +++|+|+ |.               ++                    ++|..    
T Consensus       100 ~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (283)
T cd06617         100 IPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL  179 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcc
Confidence            34555666777778888888876 7888775 33               11                    12211    


Q ss_pred             -CCCccc-e-EEEec------------CCCC-ChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         107 -LSGVVV-S-AVDFG------------SGGM-TNAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       107 -~~~~~~-s-VwsfG------------~~~~-~~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                       ...++. + |||||            |... ...+-+..+..+..+..| ..+|.++.+++.+||..+|++||++.+|+
T Consensus       180 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il  259 (283)
T cd06617         180 NQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELL  259 (283)
T ss_pred             cccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence             134688 9 99999            2221 122333344445444444 35789999999999999999999999998


Q ss_pred             H
Q psy1684         170 W  170 (189)
Q Consensus       170 ~  170 (189)
                      .
T Consensus       260 ~  260 (283)
T cd06617         260 Q  260 (283)
T ss_pred             c
Confidence            6

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.17  E-value=5e-12  Score=94.62  Aligned_cols=30  Identities=20%  Similarity=0.278  Sum_probs=26.9

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..+.++.+++.+|+..||.+|||+++++..
T Consensus       253 ~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         253 DASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            467899999999999999999999998753

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.16  E-value=1.5e-11  Score=92.79  Aligned_cols=101  Identities=11%  Similarity=0.032  Sum_probs=72.2

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC----------------------------
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT----------------------------  105 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~----------------------------  105 (189)
                      ...+..+..+.+.|+.++|..+++|||+ |+               |+++..                            
T Consensus       125 ~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~  204 (294)
T PHA02882        125 KKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDA  204 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHH
Confidence            3445567778889999999999999996 44               343210                            


Q ss_pred             -CCCCccc-e-EEEec------------CCCCC-hHH--------HHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q psy1684         106 -NLSGVVV-S-AVDFG------------SGGMT-NAE--------VLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       106 -~~~~~~~-s-VwsfG------------~~~~~-~~~--------~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                       ....++. + |||||            |.+.+ ..+        .+..+..+. . .++.+|+++.+++..||..+|++
T Consensus       205 ~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~  282 (294)
T PHA02882        205 HNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK-I-KIKNANKFIYDFIECVTKLSYEE  282 (294)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh-h-ccCCCCHHHHHHHHHHHhCCCCC
Confidence             3345788 9 99999            55542 222        223333332 1 24578999999999999999999


Q ss_pred             CCCHHHHHHHH
Q psy1684         162 RPTFETLQWKL  172 (189)
Q Consensus       162 RP~~~~i~~~l  172 (189)
                      ||++.+|.+.|
T Consensus       283 rp~~~~l~~~~  293 (294)
T PHA02882        283 KPDYDALIKIF  293 (294)
T ss_pred             CCCHHHHHHhh
Confidence            99999999876

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.16  E-value=6.3e-12  Score=95.02  Aligned_cols=143  Identities=12%  Similarity=0.012  Sum_probs=85.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++........+||+|++.. +     +..                 ++.. ...+....+..+..+.+.+
T Consensus        60 ~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~l~~~~~~~~~~~~~~~~~qi~~a  116 (301)
T cd07873          60 DLKHANIVTLHDIIHTEKSLTLVFEYLDK-D-----LKQ-----------------YLDDCGNSINMHNVKLFLFQLLRG  116 (301)
T ss_pred             hcCCCCcceEEEEEecCCeEEEEEecccc-C-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            45666666666655545555666666542 1     111                 2221 1223355556666777788


Q ss_pred             ceeeccCCcccccc-cc---------------ccc---------------------ccC--CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV---------------------HGT--NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~---------------------~~~--~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |.               +++                     +|.  ....++. + |||||    
T Consensus       117 L~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  196 (301)
T cd07873         117 LNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY  196 (301)
T ss_pred             HHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHH
Confidence            88888888888875 43               111                     111  1234778 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCC------------------CCCC-----------CCCCCHHHHHHHHHhcccCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEHGY------------------RMPC-----------PPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~------------------~~~~-----------p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                              |.+.+..+....+....                  ....           ...+++++.+|+.+|+..||.+
T Consensus       197 el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~  276 (301)
T cd07873         197 EMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRK  276 (301)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCccc
Confidence                    44444433332221100                  0001           1357889999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      |||+++++.
T Consensus       277 R~t~~eil~  285 (301)
T cd07873         277 RISAEEAMK  285 (301)
T ss_pred             CcCHHHHhc
Confidence            999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.16  E-value=2.3e-11  Score=93.04  Aligned_cols=35  Identities=26%  Similarity=0.372  Sum_probs=29.9

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK--LEDFF  176 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~--l~~~~  176 (189)
                      ..|.++.+++.+||+.||++||++.+++..  |+.+.
T Consensus       260 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         260 GASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            468899999999999999999999999874  55443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.16  E-value=1.2e-11  Score=92.23  Aligned_cols=143  Identities=12%  Similarity=0.073  Sum_probs=88.5

Q ss_pred             CCC-hHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           5 KIK-RIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~-~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .+. |+|++++.+........++|+++...+.     +..                 ++.....+.......+..+.+.|
T Consensus        57 ~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~l~~~~~~~i~~ql~~~  114 (280)
T cd05581          57 RLNGHPGIIKLYYTFQDEENLYFVLEYAPNGE-----LLQ-----------------YIRKYGSLDEKCTRFYAAEILLA  114 (280)
T ss_pred             hcccCCCchhHHHHhcCCceEEEEEcCCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHH
Confidence            345 8888888877766667788888776522     111                 12212233344445555555666


Q ss_pred             ceeeccCCcccccc-cc--------------------------------------------------------cccccC-
Q psy1684          84 LCVNLRKPCVQVSC-RI--------------------------------------------------------YLVHGT-  105 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~--------------------------------------------------------~l~~~~-  105 (189)
                      +.++|..+++|+|+ |.                                                        ++++|. 
T Consensus       115 l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~  194 (280)
T cd05581         115 LEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELL  194 (280)
T ss_pred             HHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHh
Confidence            66666666666654 22                                                        112221 


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HH
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF----ET  167 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~----~~  167 (189)
                      ....++. + |||||            |...+..+....+..+ ....|...|+.+.+++.+||+.||++||++    .+
T Consensus       195 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  273 (280)
T cd05581         195 NEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL-EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDE  273 (280)
T ss_pred             CCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc-CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHH
Confidence            2334677 8 99999            3444444444444433 345677889999999999999999999999    66


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      +++
T Consensus       274 ll~  276 (280)
T cd05581         274 LKA  276 (280)
T ss_pred             Hhc
Confidence            653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.16  E-value=3.2e-12  Score=100.19  Aligned_cols=28  Identities=25%  Similarity=0.205  Sum_probs=25.9

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .|.++.+|+.+|++.||.+|||++|+++
T Consensus       348 ~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        348 LPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            5678999999999999999999999986

>KOG1989|consensus

Probab=99.16  E-value=1.6e-12  Score=106.34  Aligned_cols=115  Identities=14%  Similarity=0.149  Sum_probs=83.1

Q ss_pred             CcCHhHHHHHhhhccCCceeeccC--Ccccccccc-cc--cccC------------------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRK--PCVQVSCRI-YL--VHGT------------------------------------  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~--~~~~~~~p~-~l--~~~~------------------------------------  105 (189)
                      .|+..+++.+..+++++++.+|..  |+||||+.. .+  +...                                    
T Consensus       140 ~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp  219 (738)
T KOG1989|consen  140 RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP  219 (738)
T ss_pred             cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence            366788888999999999999986  599999754 11  0000                                    


Q ss_pred             -----------CCCCccc-e-EEEec-------CCCCChHHH-HHHHHcC-CCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         106 -----------NLSGVVV-S-AVDFG-------SGGMTNAEV-LHQVEHG-YRMPCPPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       106 -----------~~~~~~~-s-VwsfG-------~~~~~~~~~-~~~v~~g-~~~~~p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                                 .+...++ + ||++|       |....-++- .-+|.+| +..|..+..+..+.+||..|++.||++||
T Consensus       220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RP  299 (738)
T KOG1989|consen  220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERP  299 (738)
T ss_pred             cccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCC
Confidence                       5666889 9 99999       222211111 1234455 45555567889999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhcCC
Q psy1684         164 TFETLQWKLEDFFTMEGS  181 (189)
Q Consensus       164 ~~~~i~~~l~~~~~~~~~  181 (189)
                      +.-+++..+-.+....-+
T Consensus       300 nI~Qv~~~~~~l~~~~~~  317 (738)
T KOG1989|consen  300 NIYQVLEEIFELANKPCP  317 (738)
T ss_pred             CHHHHHHHHHHHhcCCCC
Confidence            999999999888765433

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.16  E-value=3e-12  Score=95.30  Aligned_cols=110  Identities=10%  Similarity=0.020  Sum_probs=73.6

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------------------------cccccC-
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------------------------YLVHGT-  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------------------------~l~~~~-  105 (189)
                      ++.....+...++..+..+.+.|+.++|...++|+|+ |.                                 ++++|. 
T Consensus        99 ~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~  178 (267)
T PHA03390         99 LLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKI  178 (267)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhh
Confidence            4444445556777777888888999999999999885 33                                 122222 


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHH-HHHH-H-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHH
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEV-LHQV-E-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-FET  167 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~-~~~v-~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-~~~  167 (189)
                      ....++. + |||||            |.+.....+ ...+ . .....+.+..+++.+.+++.+||+.||.+||+ +++
T Consensus       179 ~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  258 (267)
T PHA03390        179 KGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNE  258 (267)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHH
Confidence            3356788 9 99999            332222211 1111 1 12334556679999999999999999999995 688


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      +++
T Consensus       259 ~l~  261 (267)
T PHA03390        259 IIK  261 (267)
T ss_pred             Hhc
Confidence            874

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.15  E-value=1.3e-11  Score=92.57  Aligned_cols=103  Identities=16%  Similarity=0.027  Sum_probs=68.7

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc--------------------cccC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL--------------------VHGT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l--------------------~~~~-~~~~~  110 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |.               ++                    ++|. ....+
T Consensus       105 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (288)
T cd07863         105 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTY  184 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCC
Confidence            445666777788888999999999999986 44               11                    1111 24557


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHc--CC----------------CC--------CCCCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEH--GY----------------RM--------PCPPGCPPRLYDI  150 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~----------------~~--------~~p~~~p~~~~~l  150 (189)
                      +. + |||+|            |.+.+..+.+..+..  +.                ..        ...+.++.++.+|
T Consensus       185 ~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  264 (288)
T cd07863         185 ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQL  264 (288)
T ss_pred             CCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHH
Confidence            88 9 99999            333333333333211  00                00        0113567888999


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.+|++.||++|||+.+++.
T Consensus       265 i~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         265 LLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHHhccCcccCCCHHHHhc
Confidence            99999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG4717|consensus

Probab=99.15  E-value=4e-12  Score=99.49  Aligned_cols=144  Identities=12%  Similarity=0.105  Sum_probs=102.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHH-HHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPEL-VEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~l-i~~~~~~a~   82 (189)
                      .-++|+|+|+|+.+-..+...|||.|.-..+..|-...++             ..        -+ -.+| -.|+.|+-.
T Consensus        72 KLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKH-------------e~--------Gl-~E~La~kYF~QI~~  129 (864)
T KOG4717|consen   72 KLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-------------EE--------GL-NEDLAKKYFAQIVH  129 (864)
T ss_pred             HHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhh-------------hc--------cc-cHHHHHHHHHHHHH
Confidence            3468999999988877778889998886653312111111             11        11 1222 346777777


Q ss_pred             CceeeccCCcccccc-cc--------cccccC-----------------------------CCCCccc-e--EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI--------YLVHGT-----------------------------NLSGVVV-S--AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~--------~l~~~~-----------------------------~~~~~~~-s--VwsfG---  118 (189)
                      ++.|+|...++|||+ |+        ||.+-.                             .+..|+. +  |||+|   
T Consensus       130 AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVIL  209 (864)
T KOG4717|consen  130 AISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVIL  209 (864)
T ss_pred             HHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHH
Confidence            899999999999995 77        222111                             5667888 4  99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |...+..+.+-+|..- ....|..+..+.++||.+++..||.+|.+.++|..
T Consensus       210 yMLVCGq~PFqeANDSETLTmImDC-KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  210 YMLVCGQPPFQEANDSETLTMIMDC-KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HHHHhCCCccccccchhhhhhhhcc-cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence                     6666777776666443 34578899999999999999999999999999875

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.15  E-value=3.1e-12  Score=93.58  Aligned_cols=137  Identities=11%  Similarity=-0.003  Sum_probs=84.2

Q ss_pred             hHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCceee
Q psy1684           8 RIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVN   87 (189)
Q Consensus         8 ~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~~   87 (189)
                      |+|++++.+.....+..|||+|++.++.     +..                 ++.....+...+...+..+.+.|+.++
T Consensus        44 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~l~~~~~~~~~~ql~~~l~~l  101 (237)
T cd05576          44 VPNMVCLHKYIVSEDSVFLVLQHAEGGK-----LWS-----------------HISKFLNIPEECVKRWAAEMVVALDAL  101 (237)
T ss_pred             CCceeehhhheecCCeEEEEEecCCCCC-----HHH-----------------HHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            5666666665555556677777666522     111                 222222344555666777778888899


Q ss_pred             ccCCcccccc-cc---------------------------------cccccC-CCCCccc-e-EEEec------CCCCCh
Q psy1684          88 LRKPCVQVSC-RI---------------------------------YLVHGT-NLSGVVV-S-AVDFG------SGGMTN  124 (189)
Q Consensus        88 ~~~~~~~~~~-p~---------------------------------~l~~~~-~~~~~~~-s-VwsfG------~~~~~~  124 (189)
                      |...++|+|+ |+                                 ++++|. ..+.++. + |||+|      ..|..+
T Consensus       102 H~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~  181 (237)
T cd05576         102 HREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTL  181 (237)
T ss_pred             HhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcch
Confidence            9888999885 44                                 122222 2345788 8 99999      223221


Q ss_pred             HHHH-HHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         125 AEVL-HQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       125 ~~~~-~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                      .... ..+........|..+++++++++.+|++.||++||++.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         182 VECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             hhcCchhcccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            1110 11122233456778899999999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.15  E-value=8.1e-12  Score=93.56  Aligned_cols=111  Identities=11%  Similarity=-0.007  Sum_probs=75.1

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc-------------------cccC
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL-------------------VHGT  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l-------------------~~~~  105 (189)
                      ++.....+....+..+..+.+.|+.++|...++|+|+ |+               ++                   ++|.
T Consensus        87 ~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~  166 (279)
T cd05633          87 HLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEV  166 (279)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHH
Confidence            4444444556667777788888999999999999986 43               22                   2221


Q ss_pred             C--CCCccc-e-EEEec------------CCCCCh--HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC----
Q psy1684         106 N--LSGVVV-S-AVDFG------------SGGMTN--AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP----  163 (189)
Q Consensus       106 ~--~~~~~~-s-VwsfG------------~~~~~~--~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP----  163 (189)
                      .  ...++. + |||||            |.+...  ...............|..++.++.+++.+||..||++||    
T Consensus       167 ~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  246 (279)
T cd05633         167 LQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLG  246 (279)
T ss_pred             hcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCC
Confidence            1  234788 9 99999            322211  112222222334556778999999999999999999999    


Q ss_pred             -CHHHHHHH
Q psy1684         164 -TFETLQWK  171 (189)
Q Consensus       164 -~~~~i~~~  171 (189)
                       +++++++.
T Consensus       247 ~~~~~~~~h  255 (279)
T cd05633         247 RGAQEVKEH  255 (279)
T ss_pred             CCHHHHHhC
Confidence             58888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.15  E-value=9.8e-12  Score=92.88  Aligned_cols=100  Identities=13%  Similarity=-0.010  Sum_probs=66.0

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c--------------------ccccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y--------------------LVHGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~--------------------l~~~~-~~~~  109 (189)
                      .++..++..+..+.+.++.++|..+++|+|+ |.               +                    +++|. ..+.
T Consensus        91 ~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  170 (277)
T cd05577          91 GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEV  170 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCC
Confidence            3445666667777888888999988888875 33               1                    11111 3345


Q ss_pred             ccc-e-EEEec------------CCCCCh----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTN----AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~----~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                      ++. + |||||            |.+...    .++...+. ....+.|...++++.+++.+||+.||++||++.+
T Consensus       171 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         171 YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-cccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence            788 8 99999            322221    22222222 2334566778999999999999999999995544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.14  E-value=1.2e-11  Score=92.46  Aligned_cols=143  Identities=15%  Similarity=0.105  Sum_probs=85.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|++++++.+.+......++|+|+... +     +..                 ++.. ...+..........+.+.|
T Consensus        54 ~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~-----l~~-----------------~l~~~~~~~~~~~~~~~~~~i~~~  110 (283)
T cd05118          54 ELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D-----LYK-----------------LIKDRQRGLPESLIKSYLYQLLQG  110 (283)
T ss_pred             HhcCCCcchHHHhhccCCCEEEEEeccCC-C-----HHH-----------------HHHhhcccCCHHHHHHHHHHHHHH
Confidence            45677888877776666677888887653 2     111                 1111 1123344455555666667


Q ss_pred             ceeeccCCcccccc-cc------------------------------------cccccC-CCC-Cccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLS-GVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~-~~~~-s-VwsfG----  118 (189)
                      +.++|...++|+|+ |.                                    +.++|. ... .++. + |||+|    
T Consensus       111 l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~  190 (283)
T cd05118         111 LAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFA  190 (283)
T ss_pred             HHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHH
Confidence            77777777777764 33                                    111121 223 5788 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHcC-CC-------------------------C---CCCCCCCHHHHHHHHHhcccCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEHG-YR-------------------------M---PCPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g-~~-------------------------~---~~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                              |++.+..+.+..+.+. ..                         .   ...+.++.++.++|.+||+.||.+
T Consensus       191 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~  270 (283)
T cd05118         191 ELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHK  270 (283)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCccc
Confidence                    4444443333222111 00                         0   011246789999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      ||++.+++.
T Consensus       271 Rp~~~~ll~  279 (283)
T cd05118         271 RITAEQALA  279 (283)
T ss_pred             CcCHHHHhh
Confidence            999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.4e-11  Score=93.69  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=43.8

Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRPT----FETL  168 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~-g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~----~~~i  168 (189)
                      ..++. + |||||            |.+.+..+....+.. ....+.....|.++.+++.+||..||++|||    +.++
T Consensus       207 ~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~l  286 (316)
T cd05574         207 DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEI  286 (316)
T ss_pred             CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHH
Confidence            34677 8 99999            445555554444432 2222222336899999999999999999999    6666


Q ss_pred             HH
Q psy1684         169 QW  170 (189)
Q Consensus       169 ~~  170 (189)
                      +.
T Consensus       287 l~  288 (316)
T cd05574         287 KQ  288 (316)
T ss_pred             Hc
Confidence            55

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.13  E-value=2.4e-11  Score=93.29  Aligned_cols=31  Identities=26%  Similarity=0.352  Sum_probs=27.7

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +..+.++.+++.+||+.+|++||++++++..
T Consensus       264 ~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         264 PKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            3468899999999999999999999998863

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.13  E-value=1.4e-11  Score=92.11  Aligned_cols=28  Identities=21%  Similarity=0.223  Sum_probs=25.8

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++.++.+++.+||..||.+||+++++++
T Consensus       256 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         256 IDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            4889999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.13  E-value=2.3e-11  Score=94.30  Aligned_cols=29  Identities=17%  Similarity=0.218  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+.++.+|+.+||..||++|||++|++..
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            45788999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.12  E-value=1.8e-11  Score=91.40  Aligned_cols=144  Identities=13%  Similarity=0.036  Sum_probs=87.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++.+........++|+|+... +     +..                 ++... ..+....+..+..+.+.
T Consensus        53 ~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~-----l~~-----------------~i~~~~~~~~~~~~~~~~~~i~~  109 (282)
T cd07829          53 KELKHPNIVKLLDVIHTERKLYLVFEYCDM-D-----LKK-----------------YLDKRPGPLSPNLIKSIMYQLLR  109 (282)
T ss_pred             HhcCCCCHHHHHhhhhcCCceEEEecCcCc-C-----HHH-----------------HHHhhccCCCHHHHHHHHHHHHH
Confidence            356788888888877666778888887653 2     111                 12111 12335555556666677


Q ss_pred             CceeeccCCcccccc-cc------------------------------------cccccC-CCC-Cccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI------------------------------------YLVHGT-NLS-GVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~-~~~-~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |.                                    ++++|. ... .++. + |||||   
T Consensus       110 ~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l  189 (282)
T cd07829         110 GLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF  189 (282)
T ss_pred             HHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHH
Confidence            777777777777765 33                                    111221 122 6788 8 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCC--------------------CC--------CCCCCCHHHHHHHHHhcccCCCC
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYR--------------------MP--------CPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~--------------------~~--------~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                               |.+.+..+.+..+.+...                    +.        .-+..+.++.+++.+||..||++
T Consensus       190 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~  269 (282)
T cd07829         190 AEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAK  269 (282)
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCccc
Confidence                     433333222222211000                    00        00123678999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      ||++.+++.
T Consensus       270 Rp~~~~~l~  278 (282)
T cd07829         270 RISAKEALK  278 (282)
T ss_pred             CCCHHHHhh
Confidence            999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG4226|consensus

Probab=99.12  E-value=1.8e-10  Score=82.87  Aligned_cols=77  Identities=40%  Similarity=0.513  Sum_probs=67.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      ||.|+|.|..++..|...+ .+|.||||++++++|+|.+|++.  .++-+||+++-.++-|.-++.+|+ +.+|++||.+
T Consensus       283 WYyG~itR~qae~~Ln~hG-~eGdFLiRDSEsnpgD~SvSlka--~grNKHFkVq~~d~~ycIGqRkF~tmd~Lv~HY~k  359 (379)
T KOG4226|consen  283 WYYGNITRHQAECALNEHG-HEGDFLIRDSESNPGDFSVSLKA--SGRNKHFKVQLVDNVYCIGQRKFHTMDELVEHYKK  359 (379)
T ss_pred             ceeccccHHHHHHHHhccC-ccCceEEecCCCCCcceeEEeec--cCCCcceEEEEecceEEeccceeccHHHHHHhhhc
Confidence            9999999999999884433 46999999999999999999999  999999999765444777788999 9999999986


Q ss_pred             c
Q psy1684          80 D   80 (189)
Q Consensus        80 ~   80 (189)
                      .
T Consensus       360 a  360 (379)
T KOG4226|consen  360 A  360 (379)
T ss_pred             C
Confidence            5

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.12  E-value=8.3e-12  Score=93.39  Aligned_cols=29  Identities=14%  Similarity=0.044  Sum_probs=26.3

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++.++.+++.+||+.||++||++++|++
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            46788999999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.11  E-value=3.8e-11  Score=93.83  Aligned_cols=65  Identities=15%  Similarity=0.167  Sum_probs=45.3

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHc-CCCCCCC--CCCCHHHHHHHHH--hcccCCCCCCCHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH-GYRMPCP--PGCPPRLYDIMLE--CWLKDPVKRPTFET  167 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~-g~~~~~p--~~~p~~~~~l~~~--C~~~~p~~RP~~~~  167 (189)
                      ...++. + |||||            |.+.+..+....+.. ...+..|  ..++++..+|+.+  |+..+|..||++.+
T Consensus       222 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~  301 (381)
T cd05626         222 RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD  301 (381)
T ss_pred             CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence            345888 9 99999            555555555444432 2223333  3678999999987  67777778999999


Q ss_pred             HHHH
Q psy1684         168 LQWK  171 (189)
Q Consensus       168 i~~~  171 (189)
                      |+..
T Consensus       302 ~l~h  305 (381)
T cd05626         302 IKAH  305 (381)
T ss_pred             HhcC
Confidence            9864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.11  E-value=4.3e-12  Score=95.52  Aligned_cols=28  Identities=21%  Similarity=0.186  Sum_probs=25.8

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++.+.+++.+||+.||++|||++|++.
T Consensus       262 ~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         262 LSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             CChHHHHHHHHHhccCccccCCHHHHhc
Confidence            5788999999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG4637|consensus

Probab=99.11  E-value=2.2e-10  Score=85.49  Aligned_cols=90  Identities=31%  Similarity=0.457  Sum_probs=75.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.++|+++-+.|  ..+++|+||||.-.+-.|+|+|+++.  .+..+-.+|...++-  |. +...|. +.++|+||
T Consensus        25 WYWgdisReev~~~L--~d~PDGsFlVRdAstm~GdYTLtl~k--~g~~KLikI~h~DgKyGF~-d~ltf~SVVelIn~y   99 (464)
T KOG4637|consen   25 WYWGDISREEVNKKL--RDQPDGSFLVRDASTMQGDYTLTLRK--GGNNKLIKIVHRDGKYGFS-DPLTFNSVVELINHY   99 (464)
T ss_pred             ccccccCHHHHHHHh--cCCCCCcEEeeccccCCCceEEEEec--CCccceeeeEEecCccCCC-CchhhHHHHHHHHHH
Confidence            999999999999999  56689999999977777999999999  999999999988776  55 566777 99999999


Q ss_pred             hhccC-----CceeeccCCcccc
Q psy1684          78 SKDAD-----GLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~a~-----gl~~~~~~~~~~~   95 (189)
                      +..+.     .+...+..|+..+
T Consensus       100 r~~SL~~yN~~LDvrLlyPVs~~  122 (464)
T KOG4637|consen  100 RNESLAQYNPKLDVRLLYPVSRY  122 (464)
T ss_pred             hhhHHHhhCcccceeeechHHHh
Confidence            87753     5666777777654

>KOG0659|consensus

Probab=99.11  E-value=3.9e-11  Score=86.66  Aligned_cols=146  Identities=12%  Similarity=0.026  Sum_probs=101.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|+++++.+....++.-||.|+++. + +...+++                    ....+.-.+.-.|..+...|
T Consensus        56 qel~h~nIi~LiD~F~~~~~l~lVfEfm~t-d-Le~vIkd--------------------~~i~l~pa~iK~y~~m~LkG  113 (318)
T KOG0659|consen   56 QELKHPNIIELIDVFPHKSNLSLVFEFMPT-D-LEVVIKD--------------------KNIILSPADIKSYMLMTLKG  113 (318)
T ss_pred             HHccCcchhhhhhhccCCCceEEEEEeccc-c-HHHHhcc--------------------cccccCHHHHHHHHHHHHHH
Confidence            468899999999988888899999999885 2 2111122                    01223356777788888899


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG----  118 (189)
                      ++|+|.+.++|||+ |.               |||+..                       -...|.. . +||.|    
T Consensus       114 l~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~A  193 (318)
T KOG0659|consen  114 LAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFA  193 (318)
T ss_pred             HHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHH
Confidence            99999999999996 55               333322                       2345889 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--CC--------------------CCCCC-----CCCCHHHHHHHHHhcccCCCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEH--GY--------------------RMPCP-----PGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--g~--------------------~~~~p-----~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                              |+|-+.-+-+..|-+  |.                    -|..|     +.++.+..+|+...|..||.+|.
T Consensus       194 ELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Ri  273 (318)
T KOG0659|consen  194 ELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRI  273 (318)
T ss_pred             HHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcc
Confidence                    666655333323211  11                    01111     24677889999999999999999


Q ss_pred             CHHHHHHH
Q psy1684         164 TFETLQWK  171 (189)
Q Consensus       164 ~~~~i~~~  171 (189)
                      |++|.++.
T Consensus       274 ta~qaL~~  281 (318)
T KOG0659|consen  274 TASQALKH  281 (318)
T ss_pred             cHHHHhcc
Confidence            99998864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.11  E-value=3.5e-11  Score=102.16  Aligned_cols=104  Identities=14%  Similarity=0.068  Sum_probs=69.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------------------------------------
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------------------------------------   99 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------------------------------------   99 (189)
                      +...+...+..+++.|+.|+|..+|+|||+ |+                                               
T Consensus        77 ~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~  156 (793)
T PLN00181         77 VDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERR  156 (793)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccc
Confidence            456667778888889999999999999985 54                                               


Q ss_pred             ------------------------cccccC-CCCCccc-e-EEEec------CCCCCh----HHHHHHHHcCCCCCCCCC
Q psy1684         100 ------------------------YLVHGT-NLSGVVV-S-AVDFG------SGGMTN----AEVLHQVEHGYRMPCPPG  142 (189)
Q Consensus       100 ------------------------~l~~~~-~~~~~~~-s-VwsfG------~~~~~~----~~~~~~v~~g~~~~~p~~  142 (189)
                                              ++|||. ....|+. + |||||      +.+..+    ...+..+.....++.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (793)
T PLN00181        157 IEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILL  236 (793)
T ss_pred             hhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhh
Confidence                                    112222 3455888 9 99999      222211    223333333333332223


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++...++.+||+.||.+||++.+|++.
T Consensus       237 ~~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        237 NWPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             cCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence            34567789999999999999999999763

>KOG0576|consensus

Probab=99.11  E-value=2.4e-10  Score=91.83  Aligned_cols=143  Identities=12%  Similarity=0.089  Sum_probs=98.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHH-HHHhhh-cc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPEL-VEHYSK-DA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~l-i~~~~~-~a   81 (189)
                      ...+|+|++.++|.-...++.+|.+|++..++     +.+     +.|.            ..  .+.++ +.|... ..
T Consensus        67 ~dc~h~nivay~gsylr~dklwicMEycgggs-----lQd-----iy~~------------Tg--plselqiayvcRetl  122 (829)
T KOG0576|consen   67 RDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS-----LQD-----IYHV------------TG--PLSELQIAYVCRETL  122 (829)
T ss_pred             ecCCCcChHHHHhhhhhhcCcEEEEEecCCCc-----ccc-----eeee------------cc--cchhHHHHHHHhhhh
Confidence            35679999999998888889999999988744     222     1110            00  12332 223222 23


Q ss_pred             CCceeeccCCcccccccc-------------------------------------cccccC----CCCCccc-e-EEEec
Q psy1684          82 DGLCVNLRKPCVQVSCRI-------------------------------------YLVHGT----NLSGVVV-S-AVDFG  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~p~-------------------------------------~l~~~~----~~~~~~~-s-VwsfG  118 (189)
                      .|+.|+|+..-+|||+.-                                     |+++|+    +.+.|+. | ||+.|
T Consensus       123 ~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~g  202 (829)
T KOG0576|consen  123 QGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG  202 (829)
T ss_pred             ccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccc
Confidence            466666666666665433                                     666666    6788999 9 99999


Q ss_pred             ------------CCCCChHHHHHHH-HcCCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQV-EHGYRMPC---PPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v-~~g~~~~~---p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                  ..++++.+++... ..|..+|.   +....+.+.++++.|+..||++||+...++.
T Consensus       203 itAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  203 ITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             cchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence                        4456677777776 55665543   3457789999999999999999999987654

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.11  E-value=5.9e-12  Score=95.32  Aligned_cols=28  Identities=11%  Similarity=-0.083  Sum_probs=25.0

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .+.++.+|+.+|++.||++|||++++++
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             CChHHHHHHHHHhccCchhccCHHHHhc
Confidence            3467889999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.11  E-value=4.3e-11  Score=92.16  Aligned_cols=105  Identities=12%  Similarity=-0.012  Sum_probs=69.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c------------------ccccCC-C-CCc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y------------------LVHGTN-L-SGV  110 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~------------------l~~~~~-~-~~~  110 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               |                  +|+|.. . ..+
T Consensus       114 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  193 (343)
T cd07878         114 KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccC
Confidence            3555666677788889999999999999996 44               2                  222221 2 357


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHc--CC--------------------CCCCC--------CCCCHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEH--GY--------------------RMPCP--------PGCPPR  146 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~--------------------~~~~p--------~~~p~~  146 (189)
                      +. + |||+|            |.+.+..+.+..+..  |.                    .+..|        ..+++.
T Consensus       194 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (343)
T cd07878         194 NQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPL  273 (343)
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHH
Confidence            88 9 99999            444443333322211  10                    00011        135667


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         147 LYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       147 ~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+|+.+|+..||++|||+.+++..
T Consensus       274 ~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         274 AIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcC
Confidence            8899999999999999999999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.10  E-value=3.3e-11  Score=92.57  Aligned_cols=30  Identities=20%  Similarity=0.154  Sum_probs=27.7

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++.++.+++.+||+.||++|||+.++++.
T Consensus       266 ~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         266 KASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             CCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            378899999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.10  E-value=1.4e-11  Score=91.33  Aligned_cols=102  Identities=10%  Similarity=0.054  Sum_probs=66.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------------cccC-C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------------VHGT-N  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------------~~~~-~  106 (189)
                      +.......+..+.+.++.++|..+++|+|+ |.               ++                        ++|. .
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (265)
T cd06652         103 LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS  182 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhc
Confidence            334445556667777888888888888775 33               11                        1121 2


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |.+.+.......+ .....+..|...+..+.+++.+||. +|++||++++|++
T Consensus       183 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         183 GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             CCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            345778 8 99999            3333333333333 2334455667777889999999995 9999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0599|consensus

Probab=99.10  E-value=8.5e-12  Score=90.65  Aligned_cols=124  Identities=17%  Similarity=0.182  Sum_probs=85.8

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------------------------ccccc
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------------------------YLVHG  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------------------------~l~~~  104 (189)
                      ||.+...++-++.-...++..+|.+|+|.+.|+|||+ |+                                   .||+|
T Consensus       113 yLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPE  192 (411)
T KOG0599|consen  113 YLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPE  192 (411)
T ss_pred             HhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChh
Confidence            6665555554445556667778999999999999995 66                                   22222


Q ss_pred             C-------CCCCccc-e-EEEec------CCC----CChHH--HHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcccCCC
Q psy1684         105 T-------NLSGVVV-S-AVDFG------SGG----MTNAE--VLHQVEHG-YRMPCP--PGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       105 ~-------~~~~~~~-s-VwsfG------~~~----~~~~~--~~~~v~~g-~~~~~p--~~~p~~~~~l~~~C~~~~p~  160 (189)
                      .       ....|+. . .||.|      ..|    ++..+  ++..|.+| +....|  .+.+.+.++||.+|++.||+
T Consensus       193 tikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~  272 (411)
T KOG0599|consen  193 TIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPT  272 (411)
T ss_pred             heeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCch
Confidence            2       4456999 9 99999      222    33333  34556666 333444  35778999999999999999


Q ss_pred             CCCCHHHHHHH--HHHHHhhcCCCCC
Q psy1684         161 KRPTFETLQWK--LEDFFTMEGSDYK  184 (189)
Q Consensus       161 ~RP~~~~i~~~--l~~~~~~~~~~~~  184 (189)
                      +|-|.+|.+..  +.++..+..+...
T Consensus       273 ~Ritake~LaHpff~q~~~~~~r~ms  298 (411)
T KOG0599|consen  273 KRITAKEALAHPFFIQIAQQQARQMS  298 (411)
T ss_pred             hcccHHHHhcChHHHHHHHhcccccC
Confidence            99999999864  6677665554443

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.10  E-value=3.2e-11  Score=90.26  Aligned_cols=108  Identities=11%  Similarity=-0.021  Sum_probs=74.9

Q ss_pred             cCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc-------------------cccCC
Q psy1684          62 KAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL-------------------VHGTN  106 (189)
Q Consensus        62 l~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l-------------------~~~~~  106 (189)
                      +.....+...++..+..+.+.|+.++|...++|+|+ |.               ++                   ++|..
T Consensus        88 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~  167 (278)
T cd05606          88 LSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL  167 (278)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHh
Confidence            333344556667777788888999999999999986 43               11                   12221


Q ss_pred             --CCCccc-e-EEEec------------CCCC---ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC----
Q psy1684         107 --LSGVVV-S-AVDFG------------SGGM---TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP----  163 (189)
Q Consensus       107 --~~~~~~-s-VwsfG------------~~~~---~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP----  163 (189)
                        ...++. + |||||            |.+.   ...++. .......++.|..++.++.+++.+|+..||++||    
T Consensus       168 ~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~  246 (278)
T cd05606         168 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLG  246 (278)
T ss_pred             cCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH-HHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCC
Confidence              224788 9 99999            3333   222222 2233445667778899999999999999999999    


Q ss_pred             -CHHHHHH
Q psy1684         164 -TFETLQW  170 (189)
Q Consensus       164 -~~~~i~~  170 (189)
                       ++.++++
T Consensus       247 ~~~~~ll~  254 (278)
T cd05606         247 RGAQEVKE  254 (278)
T ss_pred             CCHHHHHh
Confidence             8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG4792|consensus

Probab=99.10  E-value=3.5e-10  Score=79.25  Aligned_cols=76  Identities=33%  Similarity=0.489  Sum_probs=62.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEec---cC-----CccCCCCCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL---FE-----TQKAGRTTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~---~~-----gyl~~~~~~~-l~   71 (189)
                      ||+|.|+|.+|+.+|+-.  ..|.||||++...+|+|+|+++.  ...|.||.|..-   ..     ++--+...|. +.
T Consensus        13 wYfg~mSRqeA~~lL~~~--r~G~FLvRDSst~pGdYvLsV~E--~srVshYiIn~~~p~~~~~~~~~~rIgdQ~Fd~lP   88 (293)
T KOG4792|consen   13 WYFGPMSRQEAVALLQGQ--RHGVFLVRDSSTSPGDYVLSVSE--NSRVSHYIINSSPPSPAQPPPSRLRIGDQEFDSLP   88 (293)
T ss_pred             eecCcccHHHHHHHhcCc--ceeeEEEecCCCCCCceEEEEec--CcceeeeeecCCCCCccCCCcceeeeccccccchH
Confidence            999999999999999644  58999999999999999999999  899999999851   11     1333456677 89


Q ss_pred             HHHHHhhhc
Q psy1684          72 ELVEHYSKD   80 (189)
Q Consensus        72 ~li~~~~~~   80 (189)
                      .|++||.-+
T Consensus        89 aLL~fykih   97 (293)
T KOG4792|consen   89 ALLEFYKIH   97 (293)
T ss_pred             HHHhheeEe
Confidence            999987643

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=4.9e-11  Score=92.59  Aligned_cols=63  Identities=11%  Similarity=0.102  Sum_probs=45.9

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhcccCCCCCCC---HH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCPP--GCPPRLYDIMLECWLKDPVKRPT---FE  166 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p~--~~p~~~~~l~~~C~~~~p~~RP~---~~  166 (189)
                      ...++. + |||||            |.+.+..+....+... ..+..|.  .+++++.+|+.+|+. +|.+|++   +.
T Consensus       213 ~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~  291 (364)
T cd05599         213 QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN  291 (364)
T ss_pred             CCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence            345788 9 99999            5566666666666443 2334443  468999999999996 9999998   77


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +++.
T Consensus       292 ~ll~  295 (364)
T cd05599         292 EIKS  295 (364)
T ss_pred             HHhc
Confidence            7765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.09  E-value=2e-11  Score=91.31  Aligned_cols=103  Identities=13%  Similarity=0.020  Sum_probs=65.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------------------------cccccC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------------------------YLVHGT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------------------------~l~~~~-~~~~~  110 (189)
                      +..........+.+.|+.++|..+++|+|+ |.                                   ++++|. ....+
T Consensus       104 l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  183 (287)
T cd07838         104 LPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSY  183 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCC
Confidence            445666667777788888888888888875 33                                   112222 23457


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCC------------------CCC--------CCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYR------------------MPC--------PPGCPPRLYDI  150 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~------------------~~~--------p~~~p~~~~~l  150 (189)
                      +. + |||||            |.+.+..+.+..+.....                  +..        .+..+..+.++
T Consensus       184 ~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  263 (287)
T cd07838         184 ATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDL  263 (287)
T ss_pred             CCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHH
Confidence            88 8 99999            444444333333311000                  000        01235677899


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.+||+.||++||++.+++.
T Consensus       264 i~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         264 LKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHHhccCCccCCCHHHHhc
Confidence            99999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.09  E-value=3.7e-11  Score=92.97  Aligned_cols=29  Identities=17%  Similarity=0.242  Sum_probs=25.9

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+.++.+|+.+|+..||++|||+.|+++.
T Consensus       283 ~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         283 KASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             cchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            34678899999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0598|consensus

Probab=99.09  E-value=1.9e-11  Score=91.58  Aligned_cols=100  Identities=11%  Similarity=-0.032  Sum_probs=76.6

Q ss_pred             CCCCCcCHhHHHHH-hhhccCCceeeccCCcccccc-cc---------------cccccC--------------------
Q psy1684          63 AGRTTIHYPELVEH-YSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------  105 (189)
Q Consensus        63 ~~~~~~~l~~li~~-~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------  105 (189)
                      .....|. .+.+.+ ...++.++.++|.+.|+|||+ |+               ||+++.                    
T Consensus       117 ~~eg~F~-E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPE  195 (357)
T KOG0598|consen  117 QREGRFS-EDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPE  195 (357)
T ss_pred             HhcCCcc-hhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChH
Confidence            3344453 233333 334456899999999999995 77               444433                    


Q ss_pred             --CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         106 --NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       106 --~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                        ....|+. + -||.|            |.+-+..++.+++.++..+..|...+.+.++|+..-++.||++|-
T Consensus       196 il~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  196 ILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             HHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence              5667999 9 99999            777777889999988876777777999999999999999999994

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.09  E-value=2.4e-11  Score=91.42  Aligned_cols=29  Identities=21%  Similarity=0.220  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+.++.+++.+||..||++||++.+++.
T Consensus       262 ~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         262 DLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             ccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            57889999999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.09  E-value=4.5e-11  Score=92.82  Aligned_cols=28  Identities=14%  Similarity=0.184  Sum_probs=25.1

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.++.+|+.+|+..||++|||+.++++.
T Consensus       291 ~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         291 ASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             cHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            3578899999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.08  E-value=4.6e-11  Score=93.17  Aligned_cols=64  Identities=16%  Similarity=0.063  Sum_probs=45.0

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CC--CCCCCCCCHHHHHHHHHhcccCCCCCC---CHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YR--MPCPPGCPPRLYDIMLECWLKDPVKRP---TFE  166 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP---~~~  166 (189)
                      ...++. + |||||            |.+.+..+....+... ..  .+....+++++.+++.+|+ .+|.+|+   +..
T Consensus       218 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~  296 (376)
T cd05598         218 RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGAD  296 (376)
T ss_pred             CCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHH
Confidence            345788 9 99999            5555555655555432 22  2233468899999999987 4999999   888


Q ss_pred             HHHHH
Q psy1684         167 TLQWK  171 (189)
Q Consensus       167 ~i~~~  171 (189)
                      ++++.
T Consensus       297 ell~h  301 (376)
T cd05598         297 EIKAH  301 (376)
T ss_pred             HHhCC
Confidence            88754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0585|consensus

Probab=99.07  E-value=6.5e-11  Score=91.71  Aligned_cols=146  Identities=12%  Similarity=0.065  Sum_probs=99.1

Q ss_pred             CCCCChHHHHHHhcCCC--CCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCC-cCHhHHHHHhhh
Q psy1684           3 FGKIKRIEAEKKLLLPE--NDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTT-IHYPELVEHYSK   79 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~--~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~-~~l~~li~~~~~   79 (189)
                      +.++.|+|+|+|..+-.  ..+..|||.|+++.+.     +...                  ..... +...+.-.+.+.
T Consensus       162 lKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~-----v~w~------------------p~d~~els~~~Ar~ylrD  218 (576)
T KOG0585|consen  162 LKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGE-----VKWC------------------PPDKPELSEQQARKYLRD  218 (576)
T ss_pred             HHhcCCcCeeEEEEeecCcccCceEEEEEeccCCc-----cccC------------------CCCcccccHHHHHHHHHH
Confidence            35788999999876532  3456799999988632     2220                  00111 233445566777


Q ss_pred             ccCCceeeccCCcccccc-cccc-----------------------------------------cccC----CCCCccc-
Q psy1684          80 DADGLCVNLRKPCVQVSC-RIYL-----------------------------------------VHGT----NLSGVVV-  112 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~~l-----------------------------------------~~~~----~~~~~~~-  112 (189)
                      +-.||.|+|..+|+|||+ |..|                                         |+|.    ....|+- 
T Consensus       219 vv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~  298 (576)
T KOG0585|consen  219 VVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGF  298 (576)
T ss_pred             HHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccch
Confidence            788999999999999996 5511                                         1111    1234555 


Q ss_pred             e--EEEec------------CCCCChHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         113 S--AVDFG------------SGGMTNAEVLHQVEHGYRMPCPP--GCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       113 s--VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~--~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      +  |||.|            |.+-...++..+|.+. .+.+|.  ...+++++||.+.+.+||++|-+..+|....
T Consensus       299 a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~-pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  299 ALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND-PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             hhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC-cccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            4  99999            4554556777777544 344554  4678999999999999999999999987654

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.07  E-value=2.9e-11  Score=92.77  Aligned_cols=29  Identities=10%  Similarity=0.115  Sum_probs=26.7

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++.++.+++.+||+.+|++|||+.+++.
T Consensus       284 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        284 NASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            46788999999999999999999999986

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.07  E-value=6.4e-11  Score=91.03  Aligned_cols=36  Identities=28%  Similarity=0.355  Sum_probs=31.2

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK--LEDFF  176 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~--l~~~~  176 (189)
                      +.+++++.+++.+||+.||++|||++++++.  |..+.
T Consensus       261 ~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         261 PHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            4688999999999999999999999999876  65543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.06  E-value=2.4e-11  Score=102.67  Aligned_cols=163  Identities=9%  Similarity=-0.034  Sum_probs=100.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..+.|+|++++++.+...+..++|+|+++++. +.-.+..     ...      ....-.. .....+..++....+++.
T Consensus        57 s~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGS-L~~lL~s-----~~~------~~~l~e~~~~~lsv~~iL~I~~QIa~  124 (932)
T PRK13184         57 ADLIHPGIVPVYSICSDGDPVYYTMPYIEGYT-LKSLLKS-----VWQ------KESLSKELAEKTSVGAFLSIFHKICA  124 (932)
T ss_pred             HhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCC-HHHHHHH-----hhh------ccccchhhhcccCHHHHHHHHHHHHH
Confidence            35778999998887777777889999887632 2100000     000      0000000 112235666777778888


Q ss_pred             CceeeccCCcccccc-cc---------------cccc---------------------------------------cC-C
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVH---------------------------------------GT-N  106 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~---------------------------------------~~-~  106 (189)
                      |+.++|..+++|||+ |+               |++.                                       |. .
T Consensus       125 AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~  204 (932)
T PRK13184        125 TIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL  204 (932)
T ss_pred             HHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc
Confidence            999999999999985 54               2221                                       11 2


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHH--HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-CHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQV--EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-TFETLQ  169 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v--~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-~~~~i~  169 (189)
                      +..++. + |||||            |.+.+..++....  ...........+|+.+.+++.+|++.||++|| +++++.
T Consensus       205 g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        205 GVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            345788 8 99999            3333322222221  11111112246889999999999999999995 677888


Q ss_pred             HHHHHHHhh
Q psy1684         170 WKLEDFFTM  178 (189)
Q Consensus       170 ~~l~~~~~~  178 (189)
                      +.|+.+++.
T Consensus       285 ~~Le~~lq~  293 (932)
T PRK13184        285 QDLEPHLQG  293 (932)
T ss_pred             HHHHHHHhc
Confidence            889888763

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.06  E-value=6.8e-11  Score=91.12  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=30.1

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHHHh
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK--LEDFFT  177 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~--l~~~~~  177 (189)
                      ..+.++.+++.+||+.||++||++.+++..  ++.+..
T Consensus       268 ~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         268 KASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            467789999999999999999999999854  655543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.06  E-value=9.3e-11  Score=90.40  Aligned_cols=29  Identities=28%  Similarity=0.288  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..++++.+++.+||+.||++|||+.+|+.
T Consensus       269 ~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         269 GANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             cCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            35789999999999999999999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.05  E-value=4.7e-11  Score=91.73  Aligned_cols=36  Identities=25%  Similarity=0.349  Sum_probs=30.1

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHHHh
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK--LEDFFT  177 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~--l~~~~~  177 (189)
                      ..+.++.++|.+||+.||++|||+.++++.  |+....
T Consensus       263 ~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         263 NADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             ccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence            456789999999999999999999999886  555443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0603|consensus

Probab=99.05  E-value=3.3e-11  Score=95.99  Aligned_cols=97  Identities=8%  Similarity=0.018  Sum_probs=70.1

Q ss_pred             hHHHHHhhhccCCceeeccCCcccccc-ccccccc----------------C-------------------CCCCccc-e
Q psy1684          71 PELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVHG----------------T-------------------NLSGVVV-S  113 (189)
Q Consensus        71 ~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~~----------------~-------------------~~~~~~~-s  113 (189)
                      .+...+..+....+.++|..+++|||+ |+.+--+                .                   ....||+ |
T Consensus       415 ~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~ac  494 (612)
T KOG0603|consen  415 SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEAC  494 (612)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcch
Confidence            455556666677888999999999995 5522221                1                   5567999 9


Q ss_pred             -EEEec------------CCCCChH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         114 -AVDFG------------SGGMTNA-EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       114 -VwsfG------------~~~~~~~-~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                       +||+|            |..-... ++...+..|   +.....+.+.++|+.+|++.||.+||++.++..
T Consensus       495 D~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~---~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  495 DWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMP---KFSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             hhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCC---ccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence             99999            3222222 455555433   334788999999999999999999999999865

>KOG0574|consensus

Probab=99.05  E-value=4.1e-12  Score=93.50  Aligned_cols=74  Identities=14%  Similarity=0.187  Sum_probs=57.7

Q ss_pred             cccccccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCC
Q psy1684          98 RIYLVHGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus        98 p~~l~~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~  160 (189)
                      |.|+|+++ ..-.|+. + |||+|            |.++++...+..+.....|.  .|+.++.++-+++++|+-.+|+
T Consensus       193 PFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE  272 (502)
T KOG0574|consen  193 PFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPE  272 (502)
T ss_pred             cccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHH
Confidence            33777766 4456999 9 99999            88898888777775443222  3567788899999999999999


Q ss_pred             CCCCHHHHHHH
Q psy1684         161 KRPTFETLQWK  171 (189)
Q Consensus       161 ~RP~~~~i~~~  171 (189)
                      +|-|+.++++.
T Consensus       273 ~R~TA~~L~~H  283 (502)
T KOG0574|consen  273 ERKTALRLCEH  283 (502)
T ss_pred             HHHHHHHHhhh
Confidence            99999988763

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.05  E-value=2.3e-11  Score=92.28  Aligned_cols=104  Identities=14%  Similarity=0.009  Sum_probs=68.8

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------------------------cccccCC--CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------------------------YLVHGTN--LS  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------------------------~l~~~~~--~~  108 (189)
                      +...++..+..+.+.|+.++|..+++|+|+ |.                                    ++++|..  ..
T Consensus       105 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  184 (309)
T cd07845         105 FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCT  184 (309)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCC
Confidence            445556667777788888888888888875 33                                    1222221  23


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCC------------------C---CC--------CCCCH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM------------------P---CP--------PGCPP  145 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~------------------~---~p--------~~~p~  145 (189)
                      .++. + |||+|            |.+.+..+.+..+......                  .   .+        ...++
T Consensus       185 ~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (309)
T cd07845         185 TYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSE  264 (309)
T ss_pred             CcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCH
Confidence            4678 8 99999            5555555555544321100                  0   00        12467


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         146 RLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       146 ~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +..++|.+|+..||++|||+.+++..
T Consensus       265 ~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         265 AGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            88999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=9.9e-11  Score=91.36  Aligned_cols=64  Identities=9%  Similarity=0.010  Sum_probs=44.9

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhcccCCCCC---CCHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCPP--GCPPRLYDIMLECWLKDPVKR---PTFE  166 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p~--~~p~~~~~l~~~C~~~~p~~R---P~~~  166 (189)
                      ...++. + |||||            |.+.+..+....+... ..+..|.  .++.++.+++.+|+. +|.+|   +++.
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~  300 (377)
T cd05629         222 QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH  300 (377)
T ss_pred             cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence            345788 9 99999            4454555666555432 3344444  578999999999997 77765   5888


Q ss_pred             HHHHH
Q psy1684         167 TLQWK  171 (189)
Q Consensus       167 ~i~~~  171 (189)
                      +++..
T Consensus       301 ~~l~h  305 (377)
T cd05629         301 EIKSH  305 (377)
T ss_pred             HHhcC
Confidence            88764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.04  E-value=9.3e-11  Score=91.07  Aligned_cols=65  Identities=18%  Similarity=0.242  Sum_probs=45.2

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHH--hcccCCCCCCCHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCPP--GCPPRLYDIMLE--CWLKDPVKRPTFET  167 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p~--~~p~~~~~l~~~--C~~~~p~~RP~~~~  167 (189)
                      ...++. + |||||            |.+.+..+....+... ..+..|+  ..+++..+++.+  |...++..||++.+
T Consensus       210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~e  289 (363)
T cd05628         210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEE  289 (363)
T ss_pred             CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHH
Confidence            345788 9 99999            6666677777777543 2333443  467889999887  43345557799999


Q ss_pred             HHHH
Q psy1684         168 LQWK  171 (189)
Q Consensus       168 i~~~  171 (189)
                      |++.
T Consensus       290 i~~h  293 (363)
T cd05628         290 IKTN  293 (363)
T ss_pred             HhCC
Confidence            9875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG4637|consensus

Probab=99.04  E-value=5.1e-10  Score=83.62  Aligned_cols=89  Identities=28%  Similarity=0.313  Sum_probs=75.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      |+.+..++.+||.+|  .+.++|+||||++.. +|.|.+|+.+  ++.|+|+.|.+++.|  |-+....+. +++++.||
T Consensus       334 w~~~~a~r~kAe~ll--rg~~dGtFLIR~ss~-~g~yalSV~~--~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~hY  408 (464)
T KOG4637|consen  334 WRVRDANRDKAEELL--RGKPDGTFLIRESSK-GGCYALSVVH--DGEVKHCLIYQTATGFGFAEPYNLYSTLKELVLHY  408 (464)
T ss_pred             hHHhhhhHHHHHHHh--cCCCCCeEEEeeccC-CCceEEEEEE--CCceeeeEEeeccccccccchhHHHHHHHHHHHHH
Confidence            888999999999998  567899999999655 4999999999  999999999999999  777666777 99999988


Q ss_pred             hhc-----cCCceeeccCCccc
Q psy1684          78 SKD-----ADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~-----a~gl~~~~~~~~~~   94 (189)
                      ...     ++.+...+..|+..
T Consensus       409 ~h~SLe~HnDal~ttLr~Pv~~  430 (464)
T KOG4637|consen  409 QHTSLEQHNDALTTTLRYPVFA  430 (464)
T ss_pred             hhhhHHhhccccccccccceec
Confidence            654     56777777777643

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.04  E-value=9.6e-11  Score=90.62  Aligned_cols=29  Identities=17%  Similarity=0.220  Sum_probs=26.1

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+.++.+++.+||+.||++|||+.+++..
T Consensus       283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         283 KASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             chhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            46678999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1264|consensus

Probab=99.02  E-value=7.8e-10  Score=90.24  Aligned_cols=92  Identities=30%  Similarity=0.435  Sum_probs=76.1

Q ss_pred             CCCCCCC-hHHHHHHhcC----CCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEec-cCC----ccCCCCCcC-
Q psy1684           1 WYFGKIK-RIEAEKKLLL----PENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL-FET----QKAGRTTIH-   69 (189)
Q Consensus         1 w~~g~l~-~~n~~~lL~~----~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~-~~g----yl~~~~~~~-   69 (189)
                      ||||++. |..|+++|..    .+..+|+|||||+..-.|+|+||+..  .+++.|++|.-. .+|    |+.++..|. 
T Consensus       536 WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr--~grv~HcRIrsk~e~gt~Kyyl~dN~vfds  613 (1267)
T KOG1264|consen  536 WFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWR--SGRVQHCRIRSKMEGGTLKYYLTDNLVFDS  613 (1267)
T ss_pred             hhhcccccchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeE--CCceeeEEEEeeecCCceeEEEecchhHHH
Confidence            9999999 9999998863    23348999999999999999999999  999999999843 444    899898999 


Q ss_pred             HhHHHHHhhhccC---CceeeccCCccc
Q psy1684          70 YPELVEHYSKDAD---GLCVNLRKPCVQ   94 (189)
Q Consensus        70 l~~li~~~~~~a~---gl~~~~~~~~~~   94 (189)
                      +-+||.||.++..   -....++.||+.
T Consensus       614 lY~LI~~Y~~~~Lr~aeF~m~LtePvPq  641 (1267)
T KOG1264|consen  614 LYALIQHYRETHLRCAEFEMRLTEPVPQ  641 (1267)
T ss_pred             HHHHHHHHHhccccccceEEEecCCCCC
Confidence            9999999988743   455666666653

>KOG1023|consensus

Probab=99.02  E-value=4.6e-10  Score=88.79  Aligned_cols=69  Identities=26%  Similarity=0.400  Sum_probs=53.8

Q ss_pred             ccc-e-EEEec------------C----CCCChHHHHHHHHc-CCCCCCCC-----CCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         110 VVV-S-AVDFG------------S----GGMTNAEVLHQVEH-GYRMPCPP-----GCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       110 ~~~-s-VwsfG------------~----~~~~~~~~~~~v~~-g~~~~~p~-----~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      .+. + |||||            |    ...++.+++..+.+ +..+..|.     ..++++..++.+||..+|..||++
T Consensus       135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~  214 (484)
T KOG1023|consen  135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI  214 (484)
T ss_pred             ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence            577 8 99999            2    33345678888877 44444442     467789999999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q psy1684         166 ETLQWKLEDFFTM  178 (189)
Q Consensus       166 ~~i~~~l~~~~~~  178 (189)
                      ++|-..++.+...
T Consensus       215 ~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  215 EQIRSKLLTINKG  227 (484)
T ss_pred             HHHHhhhhhhccc
Confidence            9999999887764

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.02  E-value=5e-11  Score=96.34  Aligned_cols=30  Identities=20%  Similarity=0.083  Sum_probs=25.9

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..|.++.+++.+|++.||.+|||+.|++..
T Consensus       425 ~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        425 GLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             CCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            356677888999999999999999999863

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.01  E-value=6.3e-11  Score=89.68  Aligned_cols=27  Identities=26%  Similarity=0.313  Sum_probs=24.1

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...+.+|+.+||..||.+|||++++++
T Consensus       280 ~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         280 DPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            466789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.01  E-value=7.4e-11  Score=88.82  Aligned_cols=29  Identities=24%  Similarity=0.147  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..++++.+++.+|++.||++||++.++++
T Consensus       255 ~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        255 TLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            46788999999999999999999999986

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.00  E-value=2.5e-10  Score=87.98  Aligned_cols=29  Identities=24%  Similarity=0.320  Sum_probs=26.6

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+.++.+++.+||..||.+|||+.+++.
T Consensus       271 ~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         271 GVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            56788999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.99  E-value=2.5e-10  Score=89.26  Aligned_cols=63  Identities=16%  Similarity=0.172  Sum_probs=43.7

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHc-CCCCCCC--CCCCHHHHHHHHHhcccCCCCCCC---HH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH-GYRMPCP--PGCPPRLYDIMLECWLKDPVKRPT---FE  166 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~-g~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~---~~  166 (189)
                      ...|+. + |||+|            |.+.++.+....+.. ...++.|  ...+++..+++.+++ .||.+|++   +.
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~  300 (382)
T cd05625         222 RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD  300 (382)
T ss_pred             CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence            456889 9 99999            666666555555543 2233333  457889999988865 59999997   77


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +|+.
T Consensus       301 ei~~  304 (382)
T cd05625         301 EIKA  304 (382)
T ss_pred             HHhc
Confidence            7664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.99  E-value=1.7e-10  Score=88.53  Aligned_cols=104  Identities=7%  Similarity=-0.119  Sum_probs=68.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccCC---
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGTN---  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~---  106 (189)
                      +.......+..+.+.++.++|...++|+|+ |+               |++                      +|..   
T Consensus        99 l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (332)
T cd05623          99 LPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM  178 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhcc
Confidence            334444455667777888888888888885 44               222                      2111   


Q ss_pred             ---CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCC---CCCCHHHHHHHHHhcccCCC--CCC
Q psy1684         107 ---LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCP---PGCPPRLYDIMLECWLKDPV--KRP  163 (189)
Q Consensus       107 ---~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p---~~~p~~~~~l~~~C~~~~p~--~RP  163 (189)
                         .+.++. + |||||            |.+.+..+....+... .+.+.|   ..+++++.+|+.+|+..++.  .|+
T Consensus       179 ~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~  258 (332)
T cd05623         179 EDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQN  258 (332)
T ss_pred             ccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCC
Confidence               235788 9 99999            5556666666666443 333334   46799999999998755444  478


Q ss_pred             CHHHHHHH
Q psy1684         164 TFETLQWK  171 (189)
Q Consensus       164 ~~~~i~~~  171 (189)
                      ++.++++.
T Consensus       259 ~~~~~~~h  266 (332)
T cd05623         259 GIEDFKQH  266 (332)
T ss_pred             CHHHHhCC
Confidence            99988765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.99  E-value=1.5e-10  Score=87.63  Aligned_cols=28  Identities=25%  Similarity=0.164  Sum_probs=24.5

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+++.+++.+|++.||++|||+.+++.
T Consensus       280 ~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         280 LGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            3467889999999999999999998874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.99  E-value=7.1e-11  Score=88.75  Aligned_cols=26  Identities=19%  Similarity=0.171  Sum_probs=23.8

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .+..+++.+|++.||++|||+.+++.
T Consensus       262 ~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         262 PHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hhHHHHHHHHhccCcccccCHHHHhc
Confidence            77889999999999999999998874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=1.5e-10  Score=85.86  Aligned_cols=102  Identities=11%  Similarity=0.040  Sum_probs=69.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc------------------------ccC-C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV------------------------HGT-N  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~------------------------~~~-~  106 (189)
                      +.......+..+.+.++.++|...++|+|+ |.               +++                        +|. .
T Consensus       103 l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (264)
T cd06653         103 LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVIS  182 (264)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhc
Confidence            344555566677777888888888888764 33               111                        111 2


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||            |.+.+..+.+..+ ..+.++..|...++++.+++.+||. +|..||+..+++.
T Consensus       183 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         183 GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            344678 9 99999            4444433333333 3445566788899999999999999 6799999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.98  E-value=4.5e-10  Score=87.56  Aligned_cols=144  Identities=5%  Similarity=-0.129  Sum_probs=87.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++.....+...++|+|+++++. +    ..                 ++. ...+.......+..+.+.|+
T Consensus        99 ~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~-L----~~-----------------~l~-~~~~~~~~~~~~~~qil~aL  155 (370)
T cd05621          99 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGD-L----VN-----------------LMS-NYDVPEKWAKFYTAEVVLAL  155 (370)
T ss_pred             hCCCCCEeeEEEEEEcCCEEEEEEcCCCCCc-H----HH-----------------HHH-hcCCCHHHHHHHHHHHHHHH
Confidence            3456666666655544455666666665522 1    11                 221 11233344445556777788


Q ss_pred             eeeccCCcccccc-cc---------------ccc----------------------ccCC-----CCCccc-e-EEEec-
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV----------------------HGTN-----LSGVVV-S-AVDFG-  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~-----~~~~~~-s-VwsfG-  118 (189)
                      .++|...++|||+ |+               |++                      +|..     .+.++. + |||+| 
T Consensus       156 ~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~  235 (370)
T cd05621         156 DAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  235 (370)
T ss_pred             HHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehH
Confidence            8888888888885 44               222                      2211     123778 9 99999 


Q ss_pred             -----------CCCCChHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhcccCCC--CCCCHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHG-YRMPCPP--GCPPRLYDIMLECWLKDPV--KRPTFETLQWK  171 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g-~~~~~p~--~~p~~~~~l~~~C~~~~p~--~RP~~~~i~~~  171 (189)
                                 |.+.+..+....+..+ ..+..|.  ..+..+.+++.+|+..++.  .||++.++++.
T Consensus       236 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         236 FLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence                       5555555666666443 3444554  4688999999999985554  38899998875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0600|consensus

Probab=98.97  E-value=5.5e-10  Score=87.09  Aligned_cols=145  Identities=14%  Similarity=0.113  Sum_probs=97.4

Q ss_pred             CCCCChHHHHHHhcCCCCC--CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhh
Q psy1684           3 FGKIKRIEAEKKLLLPEND--HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSK   79 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~--~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~   79 (189)
                      .+.|.|+||++|.+.....  ...|||.|||.. + +                     .|.+. ....|+..++-.+..|
T Consensus       170 Lr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-D-L---------------------~GLl~~p~vkft~~qIKc~mkQ  226 (560)
T KOG0600|consen  170 LRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-D-L---------------------SGLLSSPGVKFTEPQIKCYMKQ  226 (560)
T ss_pred             HHhcCCCcccceeeEEEecCCceEEEEEecccc-h-h---------------------hhhhcCCCcccChHHHHHHHHH
Confidence            3578999999988754333  357889999886 2 1                     11111 1335656667777788


Q ss_pred             ccCCceeeccCCcccccccc----------------cccccC------------------------CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSCRI----------------YLVHGT------------------------NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~p~----------------~l~~~~------------------------~~~~~~~-s-Vwsf  117 (189)
                      ...|+.|+|.+.++|||+..                |||+-.                        -...|+. . +||.
T Consensus       227 Ll~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~  306 (560)
T KOG0600|consen  227 LLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSV  306 (560)
T ss_pred             HHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhh
Confidence            88999999999999999755                555511                        2345898 8 9999


Q ss_pred             c------------CCCCChHHHHHHH--HcCC-----------------CCCCC---------CCCCHHHHHHHHHhccc
Q psy1684         118 G------------SGGMTNAEVLHQV--EHGY-----------------RMPCP---------PGCPPRLYDIMLECWLK  157 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v--~~g~-----------------~~~~p---------~~~p~~~~~l~~~C~~~  157 (189)
                      |            |+|-+..+-+.+|  .-|.                 ++..|         ...|....+|+...+..
T Consensus       307 GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~l  386 (560)
T KOG0600|consen  307 GCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSL  386 (560)
T ss_pred             hHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhcc
Confidence            9            5665543322222  1111                 11111         24677888999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy1684         158 DPVKRPTFETLQW  170 (189)
Q Consensus       158 ~p~~RP~~~~i~~  170 (189)
                      ||++|.|+.+.+.
T Consensus       387 dP~kR~tA~~aL~  399 (560)
T KOG0600|consen  387 DPDKRGTASSALQ  399 (560)
T ss_pred             CccccccHHHHhc
Confidence            9999999998764

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.95  E-value=3.1e-10  Score=87.11  Aligned_cols=104  Identities=7%  Similarity=-0.100  Sum_probs=67.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccCCC--
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGTNL--  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~~--  107 (189)
                      +.......+..+.+.|+.++|..+++|+|+ |+               |++                      +|...  
T Consensus        99 l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (331)
T cd05624          99 LPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAM  178 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhcc
Confidence            344444455667778888888888889885 43               222                      21111  


Q ss_pred             ----CCccc-e-EEEec------------CCCCChHHHHHHHHc-CCCCCCCC---CCCHHHHHHHHHhcccCCCC--CC
Q psy1684         108 ----SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH-GYRMPCPP---GCPPRLYDIMLECWLKDPVK--RP  163 (189)
Q Consensus       108 ----~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~-g~~~~~p~---~~p~~~~~l~~~C~~~~p~~--RP  163 (189)
                          +.++. + |||||            |.+.+..+....+.. ..+++.|.   .++.++.+++.+|+..+++.  |+
T Consensus       179 ~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~  258 (331)
T cd05624         179 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQN  258 (331)
T ss_pred             ccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCC
Confidence                45788 9 99999            455555566666543 34444444   46899999999998865543  46


Q ss_pred             CHHHHHHH
Q psy1684         164 TFETLQWK  171 (189)
Q Consensus       164 ~~~~i~~~  171 (189)
                      +++++++.
T Consensus       259 ~~~~~~~h  266 (331)
T cd05624         259 GIEDFKKH  266 (331)
T ss_pred             CHHHHhcC
Confidence            77777653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.95  E-value=4e-10  Score=87.45  Aligned_cols=63  Identities=19%  Similarity=0.181  Sum_probs=43.8

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCCC--CCCHHHHHHHHHhcccCCCCCCC---HH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCPP--GCPPRLYDIMLECWLKDPVKRPT---FE  166 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p~--~~p~~~~~l~~~C~~~~p~~RP~---~~  166 (189)
                      ...++. + |||||            |.+.+..+....+... .....|+  ..+.++.+|+.+++. ||.+|++   +.
T Consensus       210 ~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~  288 (360)
T cd05627         210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVE  288 (360)
T ss_pred             CCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHH
Confidence            345888 9 99999            5566666776666543 2333444  367899999998764 9999985   55


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +|+.
T Consensus       289 ei~~  292 (360)
T cd05627         289 EIKS  292 (360)
T ss_pred             HHhc
Confidence            5554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0694|consensus

Probab=98.95  E-value=8.9e-10  Score=88.68  Aligned_cols=135  Identities=13%  Similarity=0.028  Sum_probs=98.3

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      +||.++++..+....+..|.|+|+..+ |++  +...            +        ...|+.....=|...+..||.+
T Consensus       427 ~HPFL~~L~~~fQT~~~l~fvmey~~G-gdm--~~~~------------~--------~~~F~e~rarfyaAev~l~L~f  483 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQTKEHLFFVMEYVAG-GDL--MHHI------------H--------TDVFSEPRARFYAAEVVLGLQF  483 (694)
T ss_pred             cCCeEeecccccccCCeEEEEEEecCC-CcE--EEEE------------e--------cccccHHHHHHHHHHHHHHHHH
Confidence            578888877777777888889998876 431  1111            0        2244433333344555667888


Q ss_pred             eccCCcccccccc----------------cccccC----------------------CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSCRI----------------YLVHGT----------------------NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~p~----------------~l~~~~----------------------~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+||+||+.-                ||+++.                      .+..|+. . =||||        
T Consensus       484 LH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~  563 (694)
T KOG0694|consen  484 LHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV  563 (694)
T ss_pred             HHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc
Confidence            8888888887543                444444                      6677999 8 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                          |+|-+.+++.+.|.... +..|..++.+..+||.+-+..||++|--.
T Consensus       564 Gq~PF~gddEee~FdsI~~d~-~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  564 GESPFPGDDEEEVFDSIVNDE-VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CCCCCCCCCHHHHHHHHhcCC-CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence                99999999999987653 45688999999999999999999999755

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.93  E-value=3e-10  Score=85.33  Aligned_cols=102  Identities=16%  Similarity=0.031  Sum_probs=64.6

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccCC---
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGTN---  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~---  106 (189)
                      +....+..+..+.+.++.++|..+++|+|+ |.               +++                      +|..   
T Consensus       102 l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (290)
T cd05613         102 FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGG  181 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCC
Confidence            334445555556777888888888888875 33               111                      1111   


Q ss_pred             CCCccc-e-EEEec------------CCCC----ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----
Q psy1684         107 LSGVVV-S-AVDFG------------SGGM----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----  163 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~----~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----  163 (189)
                      ...++. + |||||            |...    ...++...+..+ .++.|..+++.+.+++.+||+.||++||     
T Consensus       182 ~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~  260 (290)
T cd05613         182 DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPS  260 (290)
T ss_pred             CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc-CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCC
Confidence            123567 8 99999            2111    123333333333 3556778999999999999999999997     


Q ss_pred             CHHHHHH
Q psy1684         164 TFETLQW  170 (189)
Q Consensus       164 ~~~~i~~  170 (189)
                      +..+++.
T Consensus       261 ~~~~l~~  267 (290)
T cd05613         261 DADEIKK  267 (290)
T ss_pred             CHHHHHc
Confidence            5565544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.93  E-value=4.5e-10  Score=87.59  Aligned_cols=102  Identities=6%  Similarity=-0.138  Sum_probs=66.7

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccCC-----
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGTN-----  106 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~-----  106 (189)
                      ......+..+.+.|+.++|...++|+|+ |+               |++                      +|..     
T Consensus       141 ~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~  220 (371)
T cd05622         141 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG  220 (371)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCC
Confidence            3334445566777888888888888885 43               222                      2211     


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcccCCCC--CCCHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCP--PGCPPRLYDIMLECWLKDPVK--RPTFET  167 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p--~~~p~~~~~l~~~C~~~~p~~--RP~~~~  167 (189)
                      ...++. + |||||            |.+.+.......+... ..++.|  ...+.++.+++..|+..++..  ||++.+
T Consensus       221 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~e  300 (371)
T cd05622         221 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE  300 (371)
T ss_pred             CccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHH
Confidence            123788 9 99999            5555555666666543 233333  468899999999999844432  778888


Q ss_pred             HHHH
Q psy1684         168 LQWK  171 (189)
Q Consensus       168 i~~~  171 (189)
                      |++.
T Consensus       301 i~~h  304 (371)
T cd05622         301 IKRH  304 (371)
T ss_pred             HhcC
Confidence            8875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG3653|consensus

Probab=98.92  E-value=6.2e-10  Score=86.20  Aligned_cols=152  Identities=16%  Similarity=0.178  Sum_probs=101.8

Q ss_pred             CCChHHHHHHhcCCCCCC----CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhc
Q psy1684           5 KIKRIEAEKKLLLPENDH----GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKD   80 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~----g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~   80 (189)
                      .|.|+|++++++.....+    +.+||+++.+++.     +.+                 ||. .+.+++.++.......
T Consensus       260 ~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGs-----L~d-----------------yL~-~ntisw~~~cria~Sm  316 (534)
T KOG3653|consen  260 GMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGS-----LCD-----------------YLK-ANTISWNSLCRIAESM  316 (534)
T ss_pred             CccchhHHHhhchhccCCccccceeEEeeeccCCc-----HHH-----------------HHH-hccccHHHHHHHHHHH
Confidence            688999999997544333    5578888777732     222                 444 3345577777777778


Q ss_pred             cCCceeeccC---------Ccccccccc---------------------------------------cccccCC-----C
Q psy1684          81 ADGLCVNLRK---------PCVQVSCRI---------------------------------------YLVHGTN-----L  107 (189)
Q Consensus        81 a~gl~~~~~~---------~~~~~~~p~---------------------------------------~l~~~~~-----~  107 (189)
                      ++|++++|..         +|+|||+..                                       .||+|+.     .
T Consensus       317 arGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl  396 (534)
T KOG3653|consen  317 ARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINL  396 (534)
T ss_pred             HHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccc
Confidence            8888888863         578888765                                       2233321     1


Q ss_pred             C-Ccc-c-e-EEEec------------------------CC---CC--ChHHHHHHH-HcCCCCCCCCC-----CCHHHH
Q psy1684         108 S-GVV-V-S-AVDFG------------------------SG---GM--TNAEVLHQV-EHGYRMPCPPG-----CPPRLY  148 (189)
Q Consensus       108 ~-~~~-~-s-VwsfG------------------------~~---~~--~~~~~~~~v-~~g~~~~~p~~-----~p~~~~  148 (189)
                      + .-. . . |||.|                        |.   |.  +.+++...| .+..||.+|+.     -...+.
T Consensus       397 ~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~  476 (534)
T KOG3653|consen  397 QDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLC  476 (534)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHH
Confidence            1 212 2 5 99999                        11   11  234555555 56678888863     345778


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         149 DIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       149 ~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      +.+..||..||+.|-|+.=+.+++.++....
T Consensus       477 et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  477 ETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            9999999999999999999998888776543

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.92  E-value=5.6e-10  Score=85.63  Aligned_cols=30  Identities=23%  Similarity=0.251  Sum_probs=26.8

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++.++.+++.+|++.||++|||+.+++..
T Consensus       263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         263 NANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            457899999999999999999999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=5.6e-10  Score=85.69  Aligned_cols=104  Identities=6%  Similarity=-0.120  Sum_probs=66.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------ccCC---
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------HGTN---  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~~---  106 (189)
                      +....+..+..+++.|+.++|..+++|+|+ |.               |++                      +|..   
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (331)
T cd05597          99 LPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAM  178 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhc
Confidence            334445556667788888888888888885 43               222                      1111   


Q ss_pred             ---CCCccc-e-EEEec------------CCCCChHHHHHHHHc-CCCCCCC---CCCCHHHHHHHHHhccc--CCCCCC
Q psy1684         107 ---LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH-GYRMPCP---PGCPPRLYDIMLECWLK--DPVKRP  163 (189)
Q Consensus       107 ---~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~-g~~~~~p---~~~p~~~~~l~~~C~~~--~p~~RP  163 (189)
                         .+.++. + |||||            |.+.+..+....+.. ..+.+.|   ..+|.++.+++.+|+..  ++..||
T Consensus       179 ~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~  258 (331)
T cd05597         179 EDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRN  258 (331)
T ss_pred             cccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCC
Confidence               134778 8 99999            445555555555533 2233333   35789999999997654  344478


Q ss_pred             CHHHHHHH
Q psy1684         164 TFETLQWK  171 (189)
Q Consensus       164 ~~~~i~~~  171 (189)
                      ++.++++.
T Consensus       259 ~~~~~l~h  266 (331)
T cd05597         259 GLQDFKDH  266 (331)
T ss_pred             CHHHHhcC
Confidence            99888765

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.91  E-value=2e-10  Score=87.25  Aligned_cols=29  Identities=24%  Similarity=0.164  Sum_probs=25.8

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+.++.+++.+|++.||++|||+.+++.
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            45678899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0586|consensus

Probab=98.91  E-value=1.5e-10  Score=91.93  Aligned_cols=146  Identities=13%  Similarity=0.087  Sum_probs=95.8

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|||+++++.+-..+.-.+||+|+..++..|.                      |+.......-...-..+.+...
T Consensus       109 mk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~----------------------yl~~~gr~~e~~ar~~F~q~vs  166 (596)
T KOG0586|consen  109 MKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFD----------------------YLVKHGRMKEKEARAKFRQIVS  166 (596)
T ss_pred             HHhcCCcceeeeeeeeeecceeEEEEEeccCchhHH----------------------HHHhcccchhhhhhhhhHHHHH
Confidence            456899999999988777888999999988743221                      2221111111111122334445


Q ss_pred             CceeeccCCcccccccc------------------------------------cccccC-CCCCccc--e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSCRI------------------------------------YLVHGT-NLSGVVV--S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p~------------------------------------~l~~~~-~~~~~~~--s-VwsfG----  118 (189)
                      ++.|+|.+.++|||+..                                    ..++|. .+..|+-  + +||.|    
T Consensus       167 aveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly  246 (596)
T KOG0586|consen  167 AVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLY  246 (596)
T ss_pred             HHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhhe
Confidence            56777777777777533                                    112222 4445765  7 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.|-+..++...+..|. ..+|.-+..+..+|+.+.+-.||++|++.++|.+.
T Consensus       247 ~LV~GsLPFDG~~lk~Lr~rvl~gk-~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  247 ALVEGSLPFDGQNLKELRPRVLRGK-YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             eeeecccccCCcccccccchheeee-ecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence                    77666666666775552 23445566788999999999999999999999864

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.89  E-value=2e-10  Score=86.31  Aligned_cols=27  Identities=19%  Similarity=0.268  Sum_probs=24.6

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.++.+++.+|+..||++|||+.+++.
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            568899999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0611|consensus

Probab=98.89  E-value=7.6e-10  Score=84.71  Aligned_cols=145  Identities=13%  Similarity=0.142  Sum_probs=107.6

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+++.+++.+..+.+...||+|+.+++.     +.+                 |+.....++-++...|++++..
T Consensus       107 MSsLNHPhII~IyEVFENkdKIvivMEYaS~Ge-----LYD-----------------YiSer~~LsErEaRhfFRQIvS  164 (668)
T KOG0611|consen  107 MSSLNHPHIIQIYEVFENKDKIVIVMEYASGGE-----LYD-----------------YISERGSLSEREARHFFRQIVS  164 (668)
T ss_pred             HhhcCCCceeehhhhhcCCceEEEEEEecCCcc-----HHH-----------------HHHHhccccHHHHHHHHHHHHH
Confidence            356789999998888888888888888888733     112                 5555556666666777788888


Q ss_pred             CceeeccCCccccccc-c---------------cc--------------------cccC-CCCCccc--e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSCR-I---------------YL--------------------VHGT-NLSGVVV--S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p-~---------------~l--------------------~~~~-~~~~~~~--s-VwsfG----  118 (189)
                      +..|+|...++|||+. +               ||                    ++|. .+.+|.-  . -||+|    
T Consensus       165 AVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLY  244 (668)
T KOG0611|consen  165 AVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLY  244 (668)
T ss_pred             HHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHH
Confidence            8888888888888864 2               11                    1111 5566775  6 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.|.+...+..+|.+|.-.+  +..|.+..-||...+-.||+.|.|..+|...
T Consensus       245 tLVyGtMPFDG~Dhk~lvrQIs~GaYrE--P~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  245 TLVYGTMPFDGRDHKRLVRQISRGAYRE--PETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             HHhhcccccCCchHHHHHHHhhcccccC--CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence                    88888888889998884322  2445677889999999999999999999865

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.88  E-value=3.2e-10  Score=86.90  Aligned_cols=30  Identities=20%  Similarity=0.232  Sum_probs=27.4

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++.++.++|.+||+.+|++|||+.+++..
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            577899999999999999999999998765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.87  E-value=5.2e-12  Score=93.16  Aligned_cols=110  Identities=15%  Similarity=0.049  Sum_probs=72.3

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------  103 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------  103 (189)
                      ++.....+....+.....+.+.|+.++|..+++|+|+ |+               +.+.                     
T Consensus        88 ~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  167 (260)
T PF00069_consen   88 YLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAP  167 (260)
T ss_dssp             HHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3432344556777778888889999999999999996 55               2222                     


Q ss_pred             cC-C-CCCccc-e-EEEec------------CCCCCh---HHHHHHHHcCC-C--CCCCCCCCHHHHHHHHHhcccCCCC
Q psy1684         104 GT-N-LSGVVV-S-AVDFG------------SGGMTN---AEVLHQVEHGY-R--MPCPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       104 ~~-~-~~~~~~-s-VwsfG------------~~~~~~---~~~~~~v~~g~-~--~~~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                      |. . ...++. + |||+|            |.+.+.   ...+....... .  .......+.++.+++.+||+.||++
T Consensus       168 E~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  247 (260)
T PF00069_consen  168 EVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQ  247 (260)
T ss_dssp             HHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGG
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhH
Confidence            11 3 456788 8 99999            444422   22222221110 0  1111223489999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      |||+.++++
T Consensus       248 R~~~~~l~~  256 (260)
T PF00069_consen  248 RPSAEELLK  256 (260)
T ss_dssp             STTHHHHHT
T ss_pred             CcCHHHHhc
Confidence            999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0587|consensus

Probab=98.87  E-value=4.1e-10  Score=92.76  Aligned_cols=71  Identities=18%  Similarity=0.205  Sum_probs=56.8

Q ss_pred             cccccC------CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhccc
Q psy1684         100 YLVHGT------NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLK  157 (189)
Q Consensus       100 ~l~~~~------~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~  157 (189)
                      |||+|.      ....|+. + |||+|            +.++++...+..|.+..+|  ..|.....++.++|..|+..
T Consensus       189 WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~K  268 (953)
T KOG0587|consen  189 WMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVK  268 (953)
T ss_pred             cccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhh
Confidence            777766      4455888 9 99999            7788888888777554333  24677889999999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy1684         158 DPVKRPTFETLQW  170 (189)
Q Consensus       158 ~p~~RP~~~~i~~  170 (189)
                      |-.+||++.++++
T Consensus       269 d~e~RP~~~~ll~  281 (953)
T KOG0587|consen  269 DYEQRPSTEELLK  281 (953)
T ss_pred             ccccCcchhhhcc
Confidence            9999999988764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.86  E-value=2.2e-09  Score=74.78  Aligned_cols=78  Identities=12%  Similarity=0.103  Sum_probs=50.5

Q ss_pred             cccccccccCCCCCccc-e-EEEec------------CCCCC-hHHHHHHHHcCCCCCC------CCCCCH--HHHHHHH
Q psy1684          96 SCRIYLVHGTNLSGVVV-S-AVDFG------------SGGMT-NAEVLHQVEHGYRMPC------PPGCPP--RLYDIML  152 (189)
Q Consensus        96 ~~p~~l~~~~~~~~~~~-s-VwsfG------------~~~~~-~~~~~~~v~~g~~~~~------p~~~p~--~~~~l~~  152 (189)
                      ++||.+    ....|+. + |||||            |.+.. ..+.+..+..+.....      +...+.  ++.+++.
T Consensus        71 ~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  146 (176)
T smart00750       71 MAPEVI----QGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMR  146 (176)
T ss_pred             cChHHh----cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHH
Confidence            445544    5677999 9 99999            22221 1233333333322221      122223  6899999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         153 ECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       153 ~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                      +||..||++||++.++++.+..+..
T Consensus       147 ~cl~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      147 VCASRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             HHHhcccccccCHHHHHHHHHHHHH
Confidence            9999999999999999998876654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0032|consensus

Probab=98.85  E-value=5.6e-10  Score=86.84  Aligned_cols=104  Identities=13%  Similarity=-0.033  Sum_probs=77.8

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------------------------------cccccCC-
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------------------------------YLVHGTN-  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------------------------------~l~~~~~-  106 (189)
                      ++-.+......++..++.++|..+++|||+ |+                                       .+|+|.. 
T Consensus       132 ~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~  211 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLG  211 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhc
Confidence            455555666677788888999999999985 66                                       2222223 


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCC-CCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR-MPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~-~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      ...|+. + |||.|            |.+.+..+....|..|.- .+.+  +..+....+++..++..||..|+|..+++
T Consensus       212 ~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L  291 (382)
T KOG0032|consen  212 GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQAL  291 (382)
T ss_pred             CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHh
Confidence            367999 9 99999            666666677778877732 1212  35688999999999999999999999998


Q ss_pred             HH
Q psy1684         170 WK  171 (189)
Q Consensus       170 ~~  171 (189)
                      +.
T Consensus       292 ~H  293 (382)
T KOG0032|consen  292 QH  293 (382)
T ss_pred             cC
Confidence            84

>KOG0596|consensus

Probab=98.83  E-value=9.6e-10  Score=86.79  Aligned_cols=62  Identities=21%  Similarity=0.314  Sum_probs=42.3

Q ss_pred             ccc-e-EEEec-------CCCCChHHH---HHH---H-HcCCCCCCCCCCCHH-HHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         110 VVV-S-AVDFG-------SGGMTNAEV---LHQ---V-EHGYRMPCPPGCPPR-LYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       110 ~~~-s-VwsfG-------~~~~~~~~~---~~~---v-~~g~~~~~p~~~p~~-~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+. | |||+|       |..-.-.++   +.+   | .-+...++|..-+.. +.++|+.|++.||++|||..+++..
T Consensus       549 i~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  549 ISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             ecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            677 9 99999       332222222   222   2 234555666654444 9999999999999999999998763

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.81  E-value=1.3e-09  Score=82.99  Aligned_cols=27  Identities=22%  Similarity=0.324  Sum_probs=24.2

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.++.+|+.+|++.||.+|||++|+++
T Consensus       287 ~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         287 DSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             ChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            356789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.79  E-value=2e-09  Score=83.06  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHH--HHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQW--KLEDF  175 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~--~l~~~  175 (189)
                      ..+++++.+++.+|++.||++|||+.+++.  .++.+
T Consensus       268 ~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         268 PNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             cCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence            367788999999999999999999999984  34444

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0658|consensus

Probab=98.78  E-value=9.2e-11  Score=87.98  Aligned_cols=150  Identities=13%  Similarity=0.076  Sum_probs=92.7

Q ss_pred             CCCCChHHHHHHhcCCCCCC-----CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHh
Q psy1684           3 FGKIKRIEAEKKLLLPENDH-----GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHY   77 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~-----g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~   77 (189)
                      ++.+.|+|+|+|+-......     -.-||.|+++. .     +..    .++|         |...+..+++.++--+.
T Consensus        71 m~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-t-----L~~----~~r~---------~~~~~~~mp~~~iKLYt  131 (364)
T KOG0658|consen   71 MRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-T-----LYR----VIRH---------YTRANQRMPLLEIKLYT  131 (364)
T ss_pred             HHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-H-----HHH----HHHH---------HhhcCCCCceeeeHHHH
Confidence            45788999998775322111     22446666665 1     111    1111         22224445544444466


Q ss_pred             hhccCCceeeccCCcccccc-cccccccC--------------------------------------CCCCccc-e-EEE
Q psy1684          78 SKDADGLCVNLRKPCVQVSC-RIYLVHGT--------------------------------------NLSGVVV-S-AVD  116 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~-p~~l~~~~--------------------------------------~~~~~~~-s-Vws  116 (189)
                      .|...|+.|+|...|.|||+ |..+--+-                                      -...|+. - |||
T Consensus       132 ~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWS  211 (364)
T KOG0658|consen  132 YQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWS  211 (364)
T ss_pred             HHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhh
Confidence            68888999999999999996 55221111                                      3445888 7 999


Q ss_pred             ec------------CCCCChHHHHHHHHc--CCC-----------------C-----C----CCCCCCHHHHHHHHHhcc
Q psy1684         117 FG------------SGGMTNAEVLHQVEH--GYR-----------------M-----P----CPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       117 fG------------~~~~~~~~~~~~v~~--g~~-----------------~-----~----~p~~~p~~~~~l~~~C~~  156 (189)
                      -|            |+|-+..+-+..|.+  |..                 +     +    ....+|++..+|+.+++.
T Consensus       212 aGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~  291 (364)
T KOG0658|consen  212 AGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQ  291 (364)
T ss_pred             hhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhc
Confidence            99            888664332222211  110                 0     0    224688999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy1684         157 KDPVKRPTFETLQWK  171 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~  171 (189)
                      .+|++|-+..|++..
T Consensus       292 Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  292 YSPSKRLSALEALAH  306 (364)
T ss_pred             cChhhcCCHHHHhcc
Confidence            999999999998764

>KOG0197|consensus

Probab=98.78  E-value=2.8e-10  Score=88.94  Aligned_cols=75  Identities=11%  Similarity=0.145  Sum_probs=63.0

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKD   80 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~   80 (189)
                      +.+++|+++|+++++|..+.+.+||+|++++ |    |++.                 ||..  +..+.+.+|+++..++
T Consensus       255 Mk~L~H~~lV~l~gV~~~~~piyIVtE~m~~-G----sLl~-----------------yLr~~~~~~l~~~~Ll~~a~qI  312 (468)
T KOG0197|consen  255 MKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK-G----SLLD-----------------YLRTREGGLLNLPQLLDFAAQI  312 (468)
T ss_pred             HHhCcccCeEEEEEEEecCCceEEEEEeccc-C----cHHH-----------------HhhhcCCCccchHHHHHHHHHH
Confidence            3578999999999999988899999999999 5    3444                 3332  3455589999999999


Q ss_pred             cCCceeeccCCcccccccc
Q psy1684          81 ADGLCVNLRKPCVQVSCRI   99 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~p~   99 (189)
                      +.||+|+.++.+||||+.+
T Consensus       313 aeGM~YLes~~~IHRDLAA  331 (468)
T KOG0197|consen  313 AEGMAYLESKNYIHRDLAA  331 (468)
T ss_pred             HHHHHHHHhCCccchhhhh
Confidence            9999999999999999765

>KOG2996|consensus

Probab=98.78  E-value=1.2e-08  Score=80.68  Aligned_cols=88  Identities=23%  Similarity=0.351  Sum_probs=74.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||.|.|.|..++..|.  ...+|+||||.+....+.|.+|++.  .+.++|++|...++- +|.+...|. +.+|++||+
T Consensus       687 WyaG~MERaqaes~Lk--~~~ngT~LVR~r~kea~e~AISiky--nnevKHikI~~~dg~~~i~E~k~F~sl~ELVeyYq  762 (865)
T KOG2996|consen  687 WYAGEMERAQAESTLK--NRPNGTYLVRYRTKEAKEFAISIKY--NNEVKHIKIETNDGKVHITEDKKFNSLVELVEYYQ  762 (865)
T ss_pred             hhcchHhhhhhhhHhh--cCCCceEEEEecccchhheeEEEEe--ccccceEEEEecCCeEEechhhhhhhHHHHHHHHH
Confidence            9999999999999994  4577999999998888999999999  999999999988555 999999999 999999999


Q ss_pred             hccC-----CceeeccCCc
Q psy1684          79 KDAD-----GLCVNLRKPC   92 (189)
Q Consensus        79 ~~a~-----gl~~~~~~~~   92 (189)
                      .++.     .+...+..|.
T Consensus       763 ~~sLke~Fk~LDTtLk~Py  781 (865)
T KOG2996|consen  763 SHSLKEIFKALDTTLKFPY  781 (865)
T ss_pred             hccHHHHHHHhhhhhcCCC
Confidence            8753     4444555443

>KOG0607|consensus

Probab=98.76  E-value=1.6e-09  Score=80.59  Aligned_cols=142  Identities=11%  Similarity=0.052  Sum_probs=100.9

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      -.|+|+++|+.....++..|||.|.+.++.     +..       |          |.+..-|+-.+.......++.++.
T Consensus       133 qgh~nilqLiefFEdd~~FYLVfEKm~GGp-----lLs-------h----------I~~~~~F~E~EAs~vvkdia~aLd  190 (463)
T KOG0607|consen  133 QGHKNILQLIEFFEDDTRFYLVFEKMRGGP-----LLS-------H----------IQKRKHFNEREASRVVKDIASALD  190 (463)
T ss_pred             cCCccHHHHHHHhcccceEEEEEecccCch-----HHH-------H----------HHHhhhccHHHHHHHHHHHHHHHH
Confidence            468999999998888889999999998743     222       1          222334553333344467788899


Q ss_pred             eeccCCcccccc-cc----------------------------------------------cccccC------CCCCccc
Q psy1684          86 VNLRKPCVQVSC-RI----------------------------------------------YLVHGT------NLSGVVV  112 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~----------------------------------------------~l~~~~------~~~~~~~  112 (189)
                      ++|.++|.|||+ |+                                              .||+|+      ....|+.
T Consensus       191 FlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDK  270 (463)
T KOG0607|consen  191 FLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDK  270 (463)
T ss_pred             HHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccc
Confidence            999999999995 66                                              122222      4456899


Q ss_pred             -e-EEEec------------CC-------CCC--------hHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHhcccCC
Q psy1684         113 -S-AVDFG------------SG-------GMT--------NAEVLHQVEHGYRMPCPP----GCPPRLYDIMLECWLKDP  159 (189)
Q Consensus       113 -s-VwsfG------------~~-------~~~--------~~~~~~~v~~g~~~~~p~----~~p~~~~~l~~~C~~~~p  159 (189)
                       + .||+|            |.       ||+        ...+.+.|.+|. .++|+    +.+.+.++|+..-+..++
T Consensus       271 rCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk-YeFPdkdWahIS~eakdlisnLlvrda  349 (463)
T KOG0607|consen  271 RCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK-YEFPDKDWAHISSEAKDLISNLLVRDA  349 (463)
T ss_pred             cccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC-CcCChhhhHHhhHHHHHHHHHHHhccH
Confidence             9 99999            21       222        234566677885 45564    477889999999999999


Q ss_pred             CCCCCHHHHHH
Q psy1684         160 VKRPTFETLQW  170 (189)
Q Consensus       160 ~~RP~~~~i~~  170 (189)
                      .+|-++.+++.
T Consensus       350 ~~rlsa~~vln  360 (463)
T KOG0607|consen  350 KQRLSAAQVLN  360 (463)
T ss_pred             HhhhhhhhccC
Confidence            99999988876

>KOG0597|consensus

Probab=98.75  E-value=2e-09  Score=85.43  Aligned_cols=144  Identities=10%  Similarity=0.058  Sum_probs=96.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++.++.........|+|.|++.+ .     ++.                 +|......+-..+-.+..+.-.+
T Consensus        56 r~lkHpniv~m~esfEt~~~~~vVte~a~g-~-----L~~-----------------il~~d~~lpEe~v~~~a~~LVsa  112 (808)
T KOG0597|consen   56 RSLKHPNIVEMLESFETSAHLWVVTEYAVG-D-----LFT-----------------ILEQDGKLPEEQVRAIAYDLVSA  112 (808)
T ss_pred             HhcCCcchhhHHHhhcccceEEEEehhhhh-h-----HHH-----------------HHHhccCCCHHHHHHHHHHHHHH
Confidence            468999999999877777788999999875 2     111                 22223333322222233333456


Q ss_pred             ceeeccCCcccccc-cc---------------cc---------------------cccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.|+|+..|+|||. |.               |+                     |+|. .++.|+. + .||.|     
T Consensus       113 L~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE  192 (808)
T KOG0597|consen  113 LYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYE  192 (808)
T ss_pred             HHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHH
Confidence            77788888888875 33               22                     2322 7788999 9 99999     


Q ss_pred             -CCCCCh---H---HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -SGGMTN---A---EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -~~~~~~---~---~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                       |.|-.+   .   ++...|... ..+.|......+..++..-+.+||.+|-|-.+++..
T Consensus       193 ~~~G~PPF~a~si~~Lv~~I~~d-~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  193 LYVGQPPFYARSITQLVKSILKD-PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HhcCCCCchHHHHHHHHHHHhcC-CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence             444432   3   334444333 344566889999999999999999999999988753

>PTZ00284 protein kinase; Provisional

Probab=98.74  E-value=6.4e-09  Score=83.49  Aligned_cols=41  Identities=15%  Similarity=0.191  Sum_probs=29.9

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH--HHHHHHhhc--CCCCCC
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQW--KLEDFFTME--GSDYKE  185 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~--~l~~~~~~~--~~~~~~  185 (189)
                      +.+.+||.+|+..||++|||++|+++  .|.......  -|+|.|
T Consensus       412 ~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~~~~~~~~~  456 (467)
T PTZ00284        412 DLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPECRQHPNYPD  456 (467)
T ss_pred             HHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCccccCCCCCC
Confidence            45679999999999999999999987  354433322  355553

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.71  E-value=3.2e-09  Score=80.74  Aligned_cols=27  Identities=22%  Similarity=0.261  Sum_probs=24.0

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...+.+|+.+|+..||.+|||++|+++
T Consensus       287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         287 DSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             ChHHHHHHHHHhccCcccccCHHHHhc
Confidence            356788999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0983|consensus

Probab=98.69  E-value=4.5e-08  Score=71.62  Aligned_cols=79  Identities=22%  Similarity=0.295  Sum_probs=60.5

Q ss_pred             CcccccccccccccCCCCCccc-e-EEEec------------CCCCC-hHHHHHHHHcCCCCCCCC--CCCHHHHHHHHH
Q psy1684          91 PCVQVSCRIYLVHGTNLSGVVV-S-AVDFG------------SGGMT-NAEVLHQVEHGYRMPCPP--GCPPRLYDIMLE  153 (189)
Q Consensus        91 ~~~~~~~p~~l~~~~~~~~~~~-s-VwsfG------------~~~~~-~~~~~~~v~~g~~~~~p~--~~p~~~~~l~~~  153 (189)
                      +|...++||.+-++ ...+|+. + |||||            |++.+ ..+++-+|.+...|..|.  ..++++.+++..
T Consensus       253 GC~~YMaPERidp~-~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~  331 (391)
T KOG0983|consen  253 GCAAYMAPERIDPP-DKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKD  331 (391)
T ss_pred             CCccccCccccCCC-CCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHH
Confidence            56666677766444 3567999 9 99999            77743 468888887655444443  368999999999


Q ss_pred             hcccCCCCCCCHHHHHH
Q psy1684         154 CWLKDPVKRPTFETLQW  170 (189)
Q Consensus       154 C~~~~p~~RP~~~~i~~  170 (189)
                      |+.+|+.+||...++++
T Consensus       332 CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  332 CLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HhhcCcccCcchHHHhc
Confidence            99999999999998875

>KOG0616|consensus

Probab=98.69  E-value=2e-09  Score=79.04  Aligned_cols=101  Identities=12%  Similarity=-0.014  Sum_probs=77.0

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------------------------cccccC-
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------------------------YLVHGT-  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------------------------~l~~~~-  105 (189)
                      |+....+|+-....=|+.++..++.|+|+..++.||+ ||                                 .||+|. 
T Consensus       134 ~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii  213 (355)
T KOG0616|consen  134 YLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEII  213 (355)
T ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHh
Confidence            5665566762222234456667889999999999995 77                                 333333 


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                      ....|+. + =||||            |-+.++.++.++|.+|. ..+|.....++.+|+..-++.|-++|
T Consensus       214 ~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~-v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  214 QSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK-VKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             hcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc-ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence            5666899 8 99999            66677889999998884 56788999999999999999999999

>KOG1264|consensus

Probab=98.68  E-value=5.2e-08  Score=79.94  Aligned_cols=78  Identities=28%  Similarity=0.337  Sum_probs=65.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      |||..+.+..|+.+|.. ...+|+|||| +....+.|++|++.  .++++|++|.+...-|..+...|. +.+|++||.+
T Consensus       650 W~~as~treqAE~mL~r-vp~DGaFLiR-~~~~~nsy~iSfr~--~gkikHcRi~rdGr~fvl~t~~FesLv~lv~yY~k  725 (1267)
T KOG1264|consen  650 WYHASLTREQAEDMLMR-VPRDGAFLIR-KREGSNSYAISFRA--RGKIKHCRINRDGRHFVLGTSAFESLVELVSYYEK  725 (1267)
T ss_pred             cccccccHHHHHHHHhh-CccCcceEEE-eccCCceEEEEEEE--cCcEeEEEEccCceEEEeccHHHHHHHHHHHHHhc
Confidence            99999999999998864 3578999999 66777999999999  999999999864222777777788 9999999887


Q ss_pred             ccC
Q psy1684          80 DAD   82 (189)
Q Consensus        80 ~a~   82 (189)
                      +..
T Consensus       726 ~~l  728 (1267)
T KOG1264|consen  726 HPL  728 (1267)
T ss_pred             Chh
Confidence            653

>KOG0594|consensus

Probab=98.65  E-value=2.4e-09  Score=80.09  Aligned_cols=99  Identities=16%  Similarity=0.134  Sum_probs=68.5

Q ss_pred             HHHHhhhccCCceeeccCCcccccc-cc---------------cccccC----------------------CCC-Cccc-
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT----------------------NLS-GVVV-  112 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~----------------------~~~-~~~~-  112 (189)
                      +-.+..|...|++++|+..|+|||+ |.               |+|+..                      .+. .|+. 
T Consensus       122 ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~  201 (323)
T KOG0594|consen  122 IKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTS  201 (323)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCC
Confidence            3456678889999999999999996 65               333322                      233 4888 


Q ss_pred             e-EEEec------------CCCCChHHHHHHHHc--CC---------------CCCCCC---------CCC---HHHHHH
Q psy1684         113 S-AVDFG------------SGGMTNAEVLHQVEH--GY---------------RMPCPP---------GCP---PRLYDI  150 (189)
Q Consensus       113 s-VwsfG------------~~~~~~~~~~~~v~~--g~---------------~~~~p~---------~~p---~~~~~l  150 (189)
                      . +||+|            |+|.+..+-+..|-+  |.               ..+.|.         ..|   ++..++
T Consensus       202 vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dl  281 (323)
T KOG0594|consen  202 VDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIEL  281 (323)
T ss_pred             cchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHH
Confidence            8 99999            888776554444411  11               111111         112   478899


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +..|++.+|.+|.|++..+..
T Consensus       282 l~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  282 LSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHHHhccCcccCcCHHHHhcC
Confidence            999999999999999988875

>KOG1006|consensus

Probab=98.62  E-value=5.2e-09  Score=76.08  Aligned_cols=96  Identities=19%  Similarity=0.235  Sum_probs=65.2

Q ss_pred             eccCCcccccccccccccCCCCCccc-e-EEEec------------CCCCCh-HHHHHHHHcCCCCC--CCCC---CCHH
Q psy1684          87 NLRKPCVQVSCRIYLVHGTNLSGVVV-S-AVDFG------------SGGMTN-AEVLHQVEHGYRMP--CPPG---CPPR  146 (189)
Q Consensus        87 ~~~~~~~~~~~p~~l~~~~~~~~~~~-s-VwsfG------------~~~~~~-~~~~~~v~~g~~~~--~p~~---~p~~  146 (189)
                      .+..+|...++||.+.+.  ...|+. | |||+|            |.+++. .+-+..|..|..|.  .+.+   ....
T Consensus       225 T~daGCrpYmAPERi~p~--~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~  302 (361)
T KOG1006|consen  225 TVDAGCRPYMAPERIDPS--DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFS  302 (361)
T ss_pred             hhccCCccccChhccCCc--cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHH
Confidence            334466676778877553  236999 9 99999            666653 23333445665432  3333   5678


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH-HHHHHhhcCCCCC
Q psy1684         147 LYDIMLECWLKDPVKRPTFETLQWK-LEDFFTMEGSDYK  184 (189)
Q Consensus       147 ~~~l~~~C~~~~p~~RP~~~~i~~~-l~~~~~~~~~~~~  184 (189)
                      +..++..|+.+|-++||++.++.+. +-.+....+++-+
T Consensus       303 ~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~~v~  341 (361)
T KOG1006|consen  303 MVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGPDVE  341 (361)
T ss_pred             HHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCCcee
Confidence            9999999999999999999998765 4455555555543

>KOG1035|consensus

Probab=98.59  E-value=2.8e-08  Score=84.84  Aligned_cols=99  Identities=18%  Similarity=0.116  Sum_probs=70.0

Q ss_pred             hHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-----------------------------
Q psy1684          71 PELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------------  105 (189)
Q Consensus        71 ~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------------  105 (189)
                      ......++++..|+.|+|..++||||+ |-               |+|.+.                             
T Consensus       697 d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~V  776 (1351)
T KOG1035|consen  697 DEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQV  776 (1351)
T ss_pred             HHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccccc
Confidence            334456778889999999999999996 44               555441                             


Q ss_pred             ------------C--CCCccc-e-EEEec-------CCC---CChHHHHHHHHcCCCCCC---C-CCCCHHHHHHHHHhc
Q psy1684         106 ------------N--LSGVVV-S-AVDFG-------SGG---MTNAEVLHQVEHGYRMPC---P-PGCPPRLYDIMLECW  155 (189)
Q Consensus       106 ------------~--~~~~~~-s-VwsfG-------~~~---~~~~~~~~~v~~g~~~~~---p-~~~p~~~~~l~~~C~  155 (189)
                                  .  ..+|+. . +||.|       |+-   |.-..++..+++|.-|..   . +.+| .-.++|...+
T Consensus       777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~-~e~slI~~Ll  855 (1351)
T KOG1035|consen  777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHP-EEASLIRWLL  855 (1351)
T ss_pred             ceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCcccccccch-HHHHHHHHHh
Confidence                        2  237999 9 99999       442   223456666676654433   1 2243 4457899999


Q ss_pred             ccCCCCCCCHHHHHH
Q psy1684         156 LKDPVKRPTFETLQW  170 (189)
Q Consensus       156 ~~~p~~RP~~~~i~~  170 (189)
                      +.||++|||+.|+++
T Consensus       856 ~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  856 SHDPSKRPTATELLN  870 (1351)
T ss_pred             cCCCccCCCHHHHhh
Confidence            999999999999875

>KOG0663|consensus

Probab=98.59  E-value=4e-09  Score=78.80  Aligned_cols=143  Identities=12%  Similarity=-0.014  Sum_probs=88.2

Q ss_pred             CCChHHHHHHhcC--CCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLL--PENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~--~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a   81 (189)
                      .+.|+|+|.+-.+  ..+-+..|||+|++.. +     ++.                 .++. ...|...+.-....|..
T Consensus       131 ~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-D-----Lks-----------------l~d~m~q~F~~~evK~L~~QlL  187 (419)
T KOG0663|consen  131 KARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-D-----LKS-----------------LMETMKQPFLPGEVKTLMLQLL  187 (419)
T ss_pred             hcCCCCeeeeEEEEeccccceeeeeHHHHHh-h-----HHH-----------------HHHhccCCCchHHHHHHHHHHH
Confidence            3557777764332  2233457888887765 2     222                 1111 22455444444556777


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..-++|||+ |.               |||++.                       -...||+ . +||+|  
T Consensus       188 ~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI  267 (419)
T KOG0663|consen  188 RGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCI  267 (419)
T ss_pred             HHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHH
Confidence            8999999999999996 44               666655                       3445899 8 99999  


Q ss_pred             ----------CCCCChHHHHHHHH--cCC-------------------CCC---------CCCC-CCHHHHHHHHHhccc
Q psy1684         119 ----------SGGMTNAEVLHQVE--HGY-------------------RMP---------CPPG-CPPRLYDIMLECWLK  157 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~--~g~-------------------~~~---------~p~~-~p~~~~~l~~~C~~~  157 (189)
                                |+|-+..+-+.+|-  -|.                   .++         ++.. ....-++|+..-+..
T Consensus       268 ~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~  347 (419)
T KOG0663|consen  268 FAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTY  347 (419)
T ss_pred             HHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhcc
Confidence                      55554322222221  111                   011         1111 446778999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy1684         158 DPVKRPTFETLQW  170 (189)
Q Consensus       158 ~p~~RP~~~~i~~  170 (189)
                      ||.+|-|+.+.++
T Consensus       348 dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  348 DPGKRITAEDGLK  360 (419)
T ss_pred             CccccccHHHhhc
Confidence            9999999998775

>KOG1930|consensus

Probab=98.57  E-value=1.5e-07  Score=71.82  Aligned_cols=88  Identities=25%  Similarity=0.262  Sum_probs=71.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-------------CCCeeeEEEEEeccCC-ccCC--
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-------------SSFCLKMTTGRSLFET-QKAG--   64 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-------------~~~~v~h~~i~~~~~g-yl~~--   64 (189)
                      ||.-+|+|+.|+.+|  ..++.|+||||++.+-.|.|.|.++..             .+..|+||.|+...+| -|.+  
T Consensus       214 WYKP~isREQAIalL--rdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGVkLKGC~  291 (483)
T KOG1930|consen  214 WYKPNISREQAIALL--RDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGVKLKGCD  291 (483)
T ss_pred             ccCCCCCHHHHHHHh--hcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCceeccCCC
Confidence            999999999999999  456889999999999999999999876             1257999999999998 5544  


Q ss_pred             -CCCcC-HhHHHHHhhhccCCceeeccC
Q psy1684          65 -RTTIH-YPELVEHYSKDADGLCVNLRK   90 (189)
Q Consensus        65 -~~~~~-l~~li~~~~~~a~gl~~~~~~   90 (189)
                       ...|. |.+|+--+.-.+.+|.+++.-
T Consensus       292 nEP~FGSLSALV~QHSIt~LALPckL~i  319 (483)
T KOG1930|consen  292 NEPVFGSLSALVYQHSITALALPCKLVI  319 (483)
T ss_pred             CCCccchhHHHHhhccchhhhcceeEec
Confidence             45687 999987666666677666653

>KOG0660|consensus

Probab=98.57  E-value=1e-07  Score=71.72  Aligned_cols=94  Identities=20%  Similarity=0.096  Sum_probs=67.3

Q ss_pred             hhccCCceeeccCCcccccc-cc---------------cccccC-------------------------CCCCccc-e-E
Q psy1684          78 SKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------NLSGVVV-S-A  114 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~~~~~~~-s-V  114 (189)
                      .|...|+.|.|+.+++|||+ |.               |||+-.                         ....||. . |
T Consensus       132 YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDi  211 (359)
T KOG0660|consen  132 YQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDI  211 (359)
T ss_pred             HHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhh
Confidence            46677999999999999996 55               554422                         5677999 8 9


Q ss_pred             EEec------------CCCCCh---------------HHHHHHHH----------cCCCCCCC-----CCCCHHHHHHHH
Q psy1684         115 VDFG------------SGGMTN---------------AEVLHQVE----------HGYRMPCP-----PGCPPRLYDIML  152 (189)
Q Consensus       115 wsfG------------~~~~~~---------------~~~~~~v~----------~g~~~~~p-----~~~p~~~~~l~~  152 (189)
                      ||.|            |+|-+.               .+.+..+.          -+..++.|     +++.+...+|+.
T Consensus       212 WSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLle  291 (359)
T KOG0660|consen  212 WSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLE  291 (359)
T ss_pred             hhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHH
Confidence            9999            555432               22222221          12233333     367888999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q psy1684         153 ECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       153 ~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+..||.+|+|.+|.+..
T Consensus       292 kmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  292 KMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HHhccCccccCCHHHHhcC
Confidence            9999999999999998875

>KOG4250|consensus

Probab=98.54  E-value=7e-08  Score=78.35  Aligned_cols=152  Identities=16%  Similarity=0.137  Sum_probs=91.4

Q ss_pred             CCCChHHHHHHhcCCCCC------CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcC--HhHHH
Q psy1684           4 GKIKRIEAEKKLLLPEND------HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIH--YPELV   74 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~------~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~--l~~li   74 (189)
                      ++++|+|+|++.+.....      ....||+|+++.+.     ++.                 ++.. .+.+.  -.+++
T Consensus        66 kKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGs-----L~~-----------------~L~~PEN~~GLpE~e~l  123 (732)
T KOG4250|consen   66 KKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGS-----LRK-----------------VLNSPENAYGLPESEFL  123 (732)
T ss_pred             HHcCchhhhhhcccCCccccCcccccceEEEeecCCCc-----HHH-----------------HhcCcccccCCCHHHHH
Confidence            478899999988754322      23467777777632     222                 1221 11222  45566


Q ss_pred             HHhhhccCCceeeccCCcccccc-cc-------------------cccccC---------------------C-CCCccc
Q psy1684          75 EHYSKDADGLCVNLRKPCVQVSC-RI-------------------YLVHGT---------------------N-LSGVVV  112 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~~~-p~-------------------~l~~~~---------------------~-~~~~~~  112 (189)
                      ........|+.+++..+|+|||+ |.                   |.|++.                     . ...|+.
T Consensus       124 ~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~  203 (732)
T KOG4250|consen  124 DLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTA  203 (732)
T ss_pred             HHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCc
Confidence            66677778999999999999996 55                   445554                     2 366888


Q ss_pred             -e-EEEec---------------CCCC-ChHHHHHHHHc---------------C-----CCCCCCCCCCHHHH----HH
Q psy1684         113 -S-AVDFG---------------SGGM-TNAEVLHQVEH---------------G-----YRMPCPPGCPPRLY----DI  150 (189)
Q Consensus       113 -s-VwsfG---------------~~~~-~~~~~~~~v~~---------------g-----~~~~~p~~~p~~~~----~l  150 (189)
                       + -||||               +.+- ++.+++..+..               |     ..+|.|....+.+.    ..
T Consensus       204 tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kw  283 (732)
T KOG4250|consen  204 TVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKW  283 (732)
T ss_pred             eeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHH
Confidence             8 99999               2221 12334433321               1     12555655544433    44


Q ss_pred             HHHhcccCCCCCC--CHHHHHHHHHHHHh
Q psy1684         151 MLECWLKDPVKRP--TFETLQWKLEDFFT  177 (189)
Q Consensus       151 ~~~C~~~~p~~RP--~~~~i~~~l~~~~~  177 (189)
                      +...+..||.+|-  .|.+....+..|++
T Consensus       284 La~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  284 LASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             HHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence            4455677777777  77777777666665

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.51  E-value=5.8e-08  Score=74.97  Aligned_cols=104  Identities=14%  Similarity=-0.009  Sum_probs=66.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------cccC-CC-CCcc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NL-SGVV  111 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~-~~~~  111 (189)
                      +.......+..+.+.|+.++|...++|+|+ |.               ++                  ++|. .. ..++
T Consensus       117 l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (345)
T cd07877         117 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN  196 (345)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCC
Confidence            444555566778888999999999999986 43               11                  1221 11 3477


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHcCC------------------------CCCC------CCCCCHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEHGY------------------------RMPC------PPGCPPRL  147 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~g~------------------------~~~~------p~~~p~~~  147 (189)
                      . + |||||            |++.+..+....+....                        ..+.      ....++++
T Consensus       197 ~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (345)
T cd07877         197 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLA  276 (345)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHH
Confidence            8 8 99999            44333333222221110                        0000      11357889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         148 YDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       148 ~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++|.+|++.||++||++.+++..
T Consensus       277 ~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         277 VDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHHHHcCCChhhcCCHHHHhcC
Confidence            999999999999999999998864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0194|consensus

Probab=98.47  E-value=1.1e-06  Score=69.83  Aligned_cols=89  Identities=27%  Similarity=0.312  Sum_probs=68.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCc---e-EEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKND---Y-SLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~---~-~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li   74 (189)
                      ||||.+.+++++.+|    ..+|.||||.+....+.   + .||+.......++|+.|....++ +......|. +.+++
T Consensus        51 ~yHG~l~red~~~lL----~~~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li  126 (474)
T KOG0194|consen   51 YYHGLLPREDAEKLL----KNDGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELV  126 (474)
T ss_pred             cccccccHhHHHHHh----CCCCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHH
Confidence            899999999999999    35799999999887552   3 77777611267889999988888 777778888 99999


Q ss_pred             HHhhhccC---CceeeccCCcc
Q psy1684          75 EHYSKDAD---GLCVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~---gl~~~~~~~~~   93 (189)
                      .+|.....   +....+..|+.
T Consensus       127 ~~~~~~~~~~~~~~~~L~~PI~  148 (474)
T KOG0194|consen  127 NYYKFSKLEITGKNFFLKRPIP  148 (474)
T ss_pred             HHHHhcccceeccceeeccccc
Confidence            99887643   33334455543

>KOG0604|consensus

Probab=98.44  E-value=3.9e-07  Score=67.52  Aligned_cols=105  Identities=11%  Similarity=0.043  Sum_probs=77.1

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------cccccC---------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------YLVHGT---------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------~l~~~~---------------------  105 (189)
                      ..|.-++......+++.++.|+|+..|.|||+ |+                  |+|++.                     
T Consensus       156 ~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevl  235 (400)
T KOG0604|consen  156 QAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVL  235 (400)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHh
Confidence            34666667777788888999999999999995 76                  555544                     


Q ss_pred             CCCCccc-e-EEEec---------CCCC---C----hHHHHHHHHcCC-CCCCCC--CCCHHHHHHHHHhcccCCCCCCC
Q psy1684         106 NLSGVVV-S-AVDFG---------SGGM---T----NAEVLHQVEHGY-RMPCPP--GCPPRLYDIMLECWLKDPVKRPT  164 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG---------~~~~---~----~~~~~~~v~~g~-~~~~p~--~~p~~~~~l~~~C~~~~p~~RP~  164 (189)
                      ...+|+. + .||.|         |+..   +    .-.+..+|..|. -.|-|+  .++++.+++|+..+..+|++|-|
T Consensus       236 g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT  315 (400)
T KOG0604|consen  236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT  315 (400)
T ss_pred             CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee
Confidence            4466999 9 99999         2221   1    123556677774 233332  46788999999999999999999


Q ss_pred             HHHHHH
Q psy1684         165 FETLQW  170 (189)
Q Consensus       165 ~~~i~~  170 (189)
                      ..+++.
T Consensus       316 I~~~m~  321 (400)
T KOG0604|consen  316 IEEVMD  321 (400)
T ss_pred             HHHhhc
Confidence            998875

>KOG0605|consensus

Probab=98.42  E-value=4.4e-08  Score=77.12  Aligned_cols=70  Identities=16%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             cccccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcccCCCC
Q psy1684         100 YLVHGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCP--PGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       100 ~l~~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p--~~~p~~~~~l~~~C~~~~p~~  161 (189)
                      .+|+|+ .+..|+. + -||+|            |.+-++.++..+|.+. ..+..|  ..+..+..+||.+|+. ||++
T Consensus       354 YiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~  432 (550)
T KOG0605|consen  354 YIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPEN  432 (550)
T ss_pred             ccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHH
Confidence            333433 4556999 9 99999            6667788998888543 224444  4577999999999998 9999


Q ss_pred             CCC---HHHHHH
Q psy1684         162 RPT---FETLQW  170 (189)
Q Consensus       162 RP~---~~~i~~  170 (189)
                      |--   +.||.+
T Consensus       433 RLG~~G~~EIK~  444 (550)
T KOG0605|consen  433 RLGSKGAEEIKK  444 (550)
T ss_pred             hcCcccHHHHhc
Confidence            964   555544

>KOG0790|consensus

Probab=98.31  E-value=3.3e-06  Score=65.33  Aligned_cols=89  Identities=27%  Similarity=0.365  Sum_probs=73.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      |||..++...|+.||.... .+|.||.|.+.+++|+|+++++.  .+.+.|.+|....+- -+.++.+|. +.+|+.||+
T Consensus         6 wfh~~~~g~~ae~Ll~~~g-~dgsfl~r~s~sNp~~fsl~~r~--~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyym   82 (600)
T KOG0790|consen    6 WFHPDLSGVEAETLLKERG-VDGSFLARPSESNPGDFSLSVRR--GDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYM   82 (600)
T ss_pred             hcCCCccchhHHHHHHHhc-cccchhhccccCCCcceeEEEEe--CCceEEEEEeecCccccccCCccccchHHHHHHHH
Confidence            9999999999999987543 68999999999999999999999  999999999765443 466677888 999999998


Q ss_pred             hcc------CCceeeccCCc
Q psy1684          79 KDA------DGLCVNLRKPC   92 (189)
Q Consensus        79 ~~a------~gl~~~~~~~~   92 (189)
                      ...      +|...-+..|.
T Consensus        83 e~~~~lkekng~~ielK~pl  102 (600)
T KOG0790|consen   83 EHHGQLKEKNGDVIELKYPL  102 (600)
T ss_pred             hhhHHHHhcCCCEEEecCCC
Confidence            764      36555555553

>KOG1027|consensus

Probab=98.30  E-value=1.3e-07  Score=78.12  Aligned_cols=94  Identities=16%  Similarity=0.142  Sum_probs=61.8

Q ss_pred             HHHHhhhccCCceeeccCCcccccc-cc--------------------------------------------cccccCCC
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------------------YLVHGTNL  107 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------------------~l~~~~~~  107 (189)
                      .+.-..+.+.|++.+|+..++|||+ |.                                            |.|+|...
T Consensus       608 ~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~  687 (903)
T KOG1027|consen  608 PISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLR  687 (903)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHh
Confidence            4455567788999999999999996 54                                            33333322


Q ss_pred             CC-ccc-e-EEEec-------------CCCCChHHHHHHHHcCC----CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         108 SG-VVV-S-AVDFG-------------SGGMTNAEVLHQVEHGY----RMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       108 ~~-~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~----~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                      +. -+. . ++|+|             |.+.-..  -..|.+|.    .+..-.+|  +..+||.+.++.+|..||++.+
T Consensus       688 ~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~  763 (903)
T KOG1027|consen  688 EDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATD  763 (903)
T ss_pred             ccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHH
Confidence            22 233 5 88888             3222111  12344442    22222344  8889999999999999999999


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      |+.
T Consensus       764 VL~  766 (903)
T KOG1027|consen  764 VLN  766 (903)
T ss_pred             HhC
Confidence            975

>KOG3601|consensus

Probab=98.28  E-value=1.4e-07  Score=65.69  Aligned_cols=78  Identities=26%  Similarity=0.128  Sum_probs=68.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||+|.++++-++.++..  +.+|.||+|.+...+|.|.++++.  .+.+.|+.+.+.+.| |.....+|. +..+++|+.
T Consensus        60 wve~~i~r~~ae~~l~~--~~~G~fl~r~s~sSPg~fsgsvr~--~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~r  135 (222)
T KOG3601|consen   60 WVEGLIPRPLAEDLLSK--KRDGDFLIRLSESSPGDFSGSVRF--PDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHR  135 (222)
T ss_pred             ceecccccchhhhhhhc--cCcchhhhhhhhcCcccccccccC--CCCceeccccccCccccccchhhccCCCCCcccCc
Confidence            89999999999998865  688999999999999999999999  999999999998888 766667777 778888877


Q ss_pred             hccC
Q psy1684          79 KDAD   82 (189)
Q Consensus        79 ~~a~   82 (189)
                      ....
T Consensus       136 t~s~  139 (222)
T KOG3601|consen  136 TASQ  139 (222)
T ss_pred             cccc
Confidence            6543

>KOG4278|consensus

Probab=98.26  E-value=7.8e-08  Score=77.63  Aligned_cols=33  Identities=15%  Similarity=0.121  Sum_probs=30.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKN   35 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~   35 (189)
                      +..|.|+|+|+|||+|..+.+.|||+|+|..++
T Consensus       317 MKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN  349 (1157)
T KOG4278|consen  317 MKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN  349 (1157)
T ss_pred             HHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence            457899999999999999999999999999865

>KOG0610|consensus

Probab=98.18  E-value=7.5e-07  Score=68.47  Aligned_cols=57  Identities=25%  Similarity=0.366  Sum_probs=43.4

Q ss_pred             EEEec------------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHHH
Q psy1684         114 AVDFG------------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT----FETLQW  170 (189)
Q Consensus       114 VwsfG------------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~----~~~i~~  170 (189)
                      =|+||            |.|.++.+.+..|. +..+.|--+..+...++||++-+.+||++|-.    ++||.+
T Consensus       318 WWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  318 WWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             HHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence            68888            88888888888874 33333333356789999999999999999988    666644

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.11  E-value=2e-06  Score=70.75  Aligned_cols=26  Identities=4%  Similarity=-0.077  Sum_probs=23.2

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         146 RLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       146 ~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ...+|+.+|++.||++|||++++++.
T Consensus       425 ~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        425 AGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhCC
Confidence            45589999999999999999999874

>KOG0667|consensus

Probab=98.10  E-value=5.9e-06  Score=66.72  Aligned_cols=32  Identities=6%  Similarity=-0.036  Sum_probs=27.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~   99 (189)
                      +++..+..+..++..+|..++...+||.|+ ||
T Consensus       286 lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPE  318 (586)
T KOG0667|consen  286 LSLPLVRKFAQQILTALLFLHELGIIHCDLKPE  318 (586)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChh
Confidence            347777888999999999999999999995 77

>KOG0671|consensus

Probab=98.07  E-value=4.7e-06  Score=63.56  Aligned_cols=39  Identities=0%  Similarity=-0.211  Sum_probs=29.1

Q ss_pred             ccCCCCC--cCHhHHHHHhhhccCCceeeccCCcccccc-cc
Q psy1684          61 QKAGRTT--IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        61 yl~~~~~--~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~   99 (189)
                      |+..++.  |++..+.....|....+.++|...++|.|+ ||
T Consensus       180 Flk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPE  221 (415)
T KOG0671|consen  180 FLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPE  221 (415)
T ss_pred             HhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChh
Confidence            5655544  446666667777788899999999999985 77

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.07  E-value=3.3e-06  Score=70.84  Aligned_cols=72  Identities=14%  Similarity=0.016  Sum_probs=54.3

Q ss_pred             cccccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhcccCCCCC
Q psy1684         100 YLVHGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGY--RMPCPPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       100 ~l~~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~--~~~~p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                      ++++|. ....++. + |||||            |.+....+++..+..+.  .+..+..++.++.+++..||..||.+|
T Consensus       546 Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R  625 (669)
T cd05610         546 YLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKR  625 (669)
T ss_pred             ccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHC
Confidence            444443 4556889 9 99999            66777777777764432  222334678899999999999999999


Q ss_pred             CCHHHHHHH
Q psy1684         163 PTFETLQWK  171 (189)
Q Consensus       163 P~~~~i~~~  171 (189)
                      |++.++++.
T Consensus       626 ~ta~e~l~h  634 (669)
T cd05610         626 AGLKELKQH  634 (669)
T ss_pred             cCHHHHHhC
Confidence            999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1151|consensus

Probab=98.01  E-value=2.8e-06  Score=66.34  Aligned_cols=64  Identities=13%  Similarity=0.208  Sum_probs=41.6

Q ss_pred             CCCccc-e-EEEec------------CCC-CChHHHHHH--HHcC--CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGG-MTNAEVLHQ--VEHG--YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~-~~~~~~~~~--v~~g--~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                      .-+.+. . |||.|            |.. .+..+|++.  |.+.  ...|.-+.+..+..++|.+|++.--.+|-...+
T Consensus       658 PPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~q  737 (775)
T KOG1151|consen  658 PPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQ  737 (775)
T ss_pred             CCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHH
Confidence            445777 8 99999            211 223344432  2222  223333467889999999999999999988777


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      +..
T Consensus       738 LA~  740 (775)
T KOG1151|consen  738 LAC  740 (775)
T ss_pred             Hcc
Confidence            654

>KOG0669|consensus

Probab=98.00  E-value=6.7e-06  Score=59.86  Aligned_cols=105  Identities=14%  Similarity=0.052  Sum_probs=68.9

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------  105 (189)
                      .+|.+.++-.+....-.|+.++|+..++|||. |+               |+++-.                        
T Consensus       119 vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppE  198 (376)
T KOG0669|consen  119 VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPE  198 (376)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHH
Confidence            34556666666666678999999999999996 44               333211                        


Q ss_pred             ---CCCCccc-e-EEEec------------------------------------CCCCChHHHHHHHHc-----CCCCC-
Q psy1684         106 ---NLSGVVV-S-AVDFG------------------------------------SGGMTNAEVLHQVEH-----GYRMP-  138 (189)
Q Consensus       106 ---~~~~~~~-s-VwsfG------------------------------------~~~~~~~~~~~~v~~-----g~~~~-  138 (189)
                         -...|+. - ||.-|                                    |+++.+..+.+.+..     |..-. 
T Consensus       199 llLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv  278 (376)
T KOG0669|consen  199 LLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKV  278 (376)
T ss_pred             HhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhh
Confidence               2344777 6 88888                                    566655555555421     10000 


Q ss_pred             ----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         139 ----CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       139 ----~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                          .|-.-.++..+||...+..||++|+...+++.
T Consensus       279 ~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  279 KNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             hhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence                11122357779999999999999999988765

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.98  E-value=4.8e-07  Score=63.88  Aligned_cols=27  Identities=33%  Similarity=0.527  Sum_probs=24.5

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..+.+++..|++.||++||++.++++.
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            678899999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0696|consensus

Probab=97.97  E-value=5.6e-06  Score=64.17  Aligned_cols=89  Identities=17%  Similarity=0.091  Sum_probs=67.2

Q ss_pred             HHHhhhccCCceeeccCCcccccccc----------------cccccC----------------------CCCCccc-e-
Q psy1684          74 VEHYSKDADGLCVNLRKPCVQVSCRI----------------YLVHGT----------------------NLSGVVV-S-  113 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~~~~~p~----------------~l~~~~----------------------~~~~~~~-s-  113 (189)
                      +-|+..+|.||-++|.+.|+.||+.-                ||.+|.                      ..++|.. . 
T Consensus       453 vFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvD  532 (683)
T KOG0696|consen  453 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVD  532 (683)
T ss_pred             hhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchh
Confidence            33455666777778887777776532                333333                      6788999 8 


Q ss_pred             EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         114 AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       114 VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                      =||||            |.|.+..++.+.|.+.. ...|...+.+..+|...-+...|.+|-
T Consensus       533 WWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn-vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  533 WWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN-VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc-CcCcccccHHHHHHHHHHhhcCCcccc
Confidence            99999            88888889988885432 456788999999999999999999984

>KOG0614|consensus

Probab=97.85  E-value=1.8e-06  Score=68.26  Aligned_cols=85  Identities=12%  Similarity=0.078  Sum_probs=65.7

Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccc--------------------cC-CCCCccc-e-EEEec--
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      +..++.|+|++++|.||+ |+               |+|+                    |. ....-+. + .||+|  
T Consensus       529 v~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIl  608 (732)
T KOG0614|consen  529 VLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGIL  608 (732)
T ss_pred             HHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHH
Confidence            345788999999999995 77               2222                    11 2233455 6 89999  


Q ss_pred             ----------CCCCChHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCC
Q psy1684         119 ----------SGGMTNAEVLHQVEHGY-RMPCPPGCPPRLYDIMLECWLKDPVKRPT  164 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~-~~~~p~~~p~~~~~l~~~C~~~~p~~RP~  164 (189)
                                |.+.++......|.+|. .+.+|...+....+||.+-+..+|++|--
T Consensus       609 i~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  609 IYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence                      88889988888888884 56789999999999999999999999976

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.77  E-value=1.4e-05  Score=64.79  Aligned_cols=31  Identities=10%  Similarity=-0.070  Sum_probs=26.2

Q ss_pred             CCCCHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDP---VKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p---~~RP~~~~i~~~  171 (189)
                      ..+++...+|+.+++..+|   .+|+|++|+++.
T Consensus       467 d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        467 DRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             cccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            4678899999999999766   689999998753

>KOG0666|consensus

Probab=97.58  E-value=8.8e-06  Score=60.90  Aligned_cols=79  Identities=9%  Similarity=0.069  Sum_probs=45.2

Q ss_pred             CCCCChHHHHHHhcCCCC-CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPEN-DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~-~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a   81 (189)
                      .+.|+|+|++.|..+..+ +...+|+.++... +.+.+         ++|.+-.   .     ...++-.-+-+..-++.
T Consensus        81 ~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~I---------I~fHr~~---~-----~~~lp~~mvKsilwQil  142 (438)
T KOG0666|consen   81 LRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHI---------IKFHRAS---K-----AKQLPRSMVKSILWQIL  142 (438)
T ss_pred             HHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHH---------HHHhccc---h-----hccCCHHHHHHHHHHHH
Confidence            356788888877665544 3456778887765 32211         1111100   0     11222111223345778


Q ss_pred             CCceeeccCCcccccc-cc
Q psy1684          82 DGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~   99 (189)
                      +|+.|+|+.-++|||+ |+
T Consensus       143 ~Gv~YLH~NWvlHRDLKPa  161 (438)
T KOG0666|consen  143 DGVHYLHSNWVLHRDLKPA  161 (438)
T ss_pred             hhhHHHhhhheeeccCCcc
Confidence            8999999999999996 55

>KOG0986|consensus

Probab=97.55  E-value=0.0002  Score=56.29  Aligned_cols=105  Identities=13%  Similarity=-0.041  Sum_probs=72.8

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------cc
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HG  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~  104 (189)
                      |-+++..|.....+=|...++-||..+|...|+.||+ |+               |||                    +|
T Consensus       277 yn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPE  356 (591)
T KOG0986|consen  277 YNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPE  356 (591)
T ss_pred             eccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHH
Confidence            4445556776667777778888999999999999995 76               333                    22


Q ss_pred             C-CCCCccc-e-EEEec------------CCC----CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         105 T-NLSGVVV-S-AVDFG------------SGG----MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       105 ~-~~~~~~~-s-VwsfG------------~~~----~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      + ..+.|+. . =||+|            |..    ...++|-..+.+. .-..|+..+++.++|...-++.||++|--.
T Consensus       357 vl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~-~~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  357 VLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED-PEEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             HHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-hhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            2 4566888 7 99999            211    2233444444322 233567888999999999999999998654


Q ss_pred             H
Q psy1684         166 E  166 (189)
Q Consensus       166 ~  166 (189)
                      .
T Consensus       436 r  436 (591)
T KOG0986|consen  436 R  436 (591)
T ss_pred             C
Confidence            3

>KOG1167|consensus

Probab=97.45  E-value=8.9e-05  Score=57.29  Aligned_cols=29  Identities=31%  Similarity=0.392  Sum_probs=25.2

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      -|...++|+.+|+..||.+|-|+++.++.
T Consensus       353 ~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  353 FPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             ccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence            34588999999999999999999988763

>KOG0690|consensus

Probab=97.28  E-value=0.00058  Score=51.78  Aligned_cols=66  Identities=15%  Similarity=0.106  Sum_probs=49.5

Q ss_pred             ccccccccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q psy1684          97 CRIYLVHGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus        97 ~p~~l~~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                      .|+.||+++ ....|.. . =|..|            |-+-+.+.+...|..+ -+.+|....++.+.|+.--+..||++
T Consensus       331 TPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-d~kFPr~ls~eAktLLsGLL~kdP~k  409 (516)
T KOG0690|consen  331 TPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-DLKFPRTLSPEAKTLLSGLLKKDPKK  409 (516)
T ss_pred             ChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-hccCCccCCHHHHHHHHHHhhcChHh
Confidence            355666666 4566888 7 99999            4445556666666444 35678899999999999999999999


Q ss_pred             CC
Q psy1684         162 RP  163 (189)
Q Consensus       162 RP  163 (189)
                      |-
T Consensus       410 RL  411 (516)
T KOG0690|consen  410 RL  411 (516)
T ss_pred             hc
Confidence            94

>KOG0662|consensus

Probab=97.16  E-value=0.00011  Score=51.01  Aligned_cols=27  Identities=7%  Similarity=-0.055  Sum_probs=21.3

Q ss_pred             HHHHhhhccCCceeeccCCcccccc-cc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~~~~-p~   99 (189)
                      ..++..+...|+.+.|+..+.|||+ |.
T Consensus       103 ~rsfmlqllrgl~fchshnvlhrdlkpq  130 (292)
T KOG0662|consen  103 VRSFMLQLLRGLGFCHSHNVLHRDLKPQ  130 (292)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhccCCcc
Confidence            3445667778999999999999996 55

>KOG0590|consensus

Probab=97.09  E-value=0.00016  Score=59.91  Aligned_cols=102  Identities=14%  Similarity=-0.019  Sum_probs=64.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------------------------------cccccC-
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------------------------------YLVHGT-  105 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------------------------------~l~~~~-  105 (189)
                      ++..+.-.++.+...|+.|+|..++.|||+ ++                                        ++|+|. 
T Consensus       417 ~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~  496 (601)
T KOG0590|consen  417 LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVL  496 (601)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccc
Confidence            334445556677778888888888888885 44                                        233333 


Q ss_pred             CCCCccc--e-EEEec------------C--CCCChHHHHHHH-------HcCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q psy1684         106 NLSGVVV--S-AVDFG------------S--GGMTNAEVLHQV-------EHGYRMPCPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       106 ~~~~~~~--s-VwsfG------------~--~~~~~~~~~~~v-------~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                      ....|+.  . |||-|            |  +.....+.....       ..|... +-...|.+.+.+|.+.++.||.+
T Consensus       497 ~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~~~~~~l~~~P~~  575 (601)
T KOG0590|consen  497 TGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR-LLSLLPRETRIIIYRMLQLDPTK  575 (601)
T ss_pred             cccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH-HHHhchhhHHHHHHHHccCChhh
Confidence            4556888  5 99999            1  111111001111       111110 11357889999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      |-|+++|++
T Consensus       576 R~ti~~i~~  584 (601)
T KOG0590|consen  576 RITIEQILN  584 (601)
T ss_pred             eecHHHHhh
Confidence            999999986

>KOG3751|consensus

Probab=97.03  E-value=0.00034  Score=55.50  Aligned_cols=78  Identities=27%  Similarity=0.320  Sum_probs=63.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC---ccCC---CCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET---QKAG---RTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g---yl~~---~~~~~-l~~l   73 (189)
                      |||++|++++.-++++..+.-+|.|++|++.+++..|.+++-+  ..+++|+.|.-....   |...   ...|+ +..+
T Consensus       521 ~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~--~~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~~ql  598 (622)
T KOG3751|consen  521 WFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCH--PQKVKHFQILPVEDDGCTFFTLDDGPTKFSDLIQL  598 (622)
T ss_pred             CcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccC--CccccceEEecCCCCCceeeccCCCCccccccccc
Confidence            9999999999999999888889999999999999999999998  899999999854333   3322   23455 6777


Q ss_pred             HHHhhhc
Q psy1684          74 VEHYSKD   80 (189)
Q Consensus        74 i~~~~~~   80 (189)
                      +.++..+
T Consensus       599 ~~~~ql~  605 (622)
T KOG3751|consen  599 VEFYQLN  605 (622)
T ss_pred             cchhhcC
Confidence            7776654

>KOG0668|consensus

Probab=96.94  E-value=0.00055  Score=49.47  Aligned_cols=29  Identities=17%  Similarity=0.109  Sum_probs=25.5

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++..+++..-+..|-.+|+|++|.+..
T Consensus       294 ~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  294 VSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             CChHHHHHHHHHHhhccccccchHHHhcC
Confidence            45788899999999999999999998753

>KOG0612|consensus

Probab=96.92  E-value=0.00086  Score=58.20  Aligned_cols=62  Identities=15%  Similarity=0.125  Sum_probs=42.1

Q ss_pred             CCccc-e-EEEec-------CCC-----CChHHHHHHH-HcCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCC---HHH
Q psy1684         108 SGVVV-S-AVDFG-------SGG-----MTNAEVLHQV-EHGYRMPCP--PGCPPRLYDIMLECWLKDPVKRPT---FET  167 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------~~~-----~~~~~~~~~v-~~g~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~---~~~  167 (189)
                      +.|.. + =||.|       |..     -+.-+.+.+| .....+.+|  ..++++..+||.+-+. +|+.|-.   ..+
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngied  334 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIED  334 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHH
Confidence            67999 9 99999       211     1223344444 233456677  5689999999998765 7888877   777


Q ss_pred             HHH
Q psy1684         168 LQW  170 (189)
Q Consensus       168 i~~  170 (189)
                      |..
T Consensus       335 ik~  337 (1317)
T KOG0612|consen  335 IKN  337 (1317)
T ss_pred             HHh
Confidence            654

>KOG0665|consensus

Probab=96.90  E-value=0.00046  Score=51.94  Aligned_cols=27  Identities=19%  Similarity=0.235  Sum_probs=24.0

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ....+|+.+.+..||++|-|..++++.
T Consensus       284 ~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  284 SLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HHHHHHHHHhhccChhhcccHHHHhcC
Confidence            457799999999999999999999874

>KOG0664|consensus

Probab=96.90  E-value=0.0012  Score=49.02  Aligned_cols=24  Identities=8%  Similarity=-0.097  Sum_probs=20.1

Q ss_pred             HhhhccCCceeeccCCcccccccc
Q psy1684          76 HYSKDADGLCVNLRKPCVQVSCRI   99 (189)
Q Consensus        76 ~~~~~a~gl~~~~~~~~~~~~~p~   99 (189)
                      |..++..|+.|+|+..|+|||+..
T Consensus       161 FlYQILRGLKYLHsA~ILHRDIKP  184 (449)
T KOG0664|consen  161 FVYQILRGLKYLHTANILHRDIKP  184 (449)
T ss_pred             hHHHHHhhhHHHhhcchhhccCCC
Confidence            455677899999999999999754

>KOG1152|consensus

Probab=96.84  E-value=0.00085  Score=54.45  Aligned_cols=73  Identities=12%  Similarity=0.055  Sum_probs=50.8

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      =+|+|++++|......+-.||++|-... |   +-+..                 ||.-+..+.-.+.--.+.|+..|..
T Consensus       626 ~sH~NIlKlLdfFEddd~yyl~te~hg~-g---IDLFd-----------------~IE~kp~m~E~eAk~IFkQV~agi~  684 (772)
T KOG1152|consen  626 HSHENILKLLDFFEDDDYYYLETEVHGE-G---IDLFD-----------------FIEFKPRMDEPEAKLIFKQVVAGIK  684 (772)
T ss_pred             cCccchhhhhheeecCCeeEEEecCCCC-C---cchhh-----------------hhhccCccchHHHHHHHHHHHhccc
Confidence            3599999999988877778888876443 2   11222                 4444444442333334678899999


Q ss_pred             eeccCCcccccccc
Q psy1684          86 VNLRKPCVQVSCRI   99 (189)
Q Consensus        86 ~~~~~~~~~~~~p~   99 (189)
                      .+|...|+|||+..
T Consensus       685 hlh~~~ivhrdikd  698 (772)
T KOG1152|consen  685 HLHDQGIVHRDIKD  698 (772)
T ss_pred             cccccCceeccccc
Confidence            99999999999865

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=96.73  E-value=0.0097  Score=42.93  Aligned_cols=72  Identities=17%  Similarity=0.151  Sum_probs=50.9

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--------ccCCCCCcC-HhHH
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--------QKAGRTTIH-YPEL   73 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--------yl~~~~~~~-l~~l   73 (189)
                      +.+++...|+++|..  .+.|.+|||.|..+.+.++++++.. ++...|+.|......        +.-++..|. |.++
T Consensus        41 F~n~~~~qAe~~L~~--~~~Ge~iIRPSSkG~dhL~vTwKv~-d~vyqHidV~E~~K~n~~slG~~L~i~~~~yeDLDEi  117 (220)
T PF14633_consen   41 FKNFNYKQAEEYLAD--QDVGEVIIRPSSKGPDHLTVTWKVA-DGVYQHIDVKEEDKENEFSLGKTLKIGGEEYEDLDEI  117 (220)
T ss_dssp             EESS-HHHHHHHHCC--S-TT-EEEEE-TTTTTEEEEEEEEE-TTEEEEEEEEEECSSSTTS-SSEEEETTEEESSHHHH
T ss_pred             ccCCCHHHHHHHHhc--CCCCCEEEeeCCCCCCeEEEEEEEc-CCcEEEEEEEECCCcCccccCcEEEECCeEECCHHHH
Confidence            448899999999954  4579999999988777789999875 678889999865432        233456677 8887


Q ss_pred             HHHh
Q psy1684          74 VEHY   77 (189)
Q Consensus        74 i~~~   77 (189)
                      +.-+
T Consensus       118 i~r~  121 (220)
T PF14633_consen  118 IARH  121 (220)
T ss_dssp             HHHC
T ss_pred             HHHH
Confidence            7543

>KOG0695|consensus

Probab=96.62  E-value=0.00064  Score=51.74  Aligned_cols=58  Identities=17%  Similarity=0.134  Sum_probs=40.2

Q ss_pred             CCCCccc-e-EEEec-------------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         106 NLSGVVV-S-AVDFG-------------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG-------------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                      ++..|.. . =|++|                   -++.+.++.+.+|.-.....+|...+.....+++.-+++||++|-
T Consensus       424 rgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  424 RGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             cccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence            5566888 7 89999                   344455666666532223445667777778888999999999984

>KOG4236|consensus

Probab=96.44  E-value=0.0049  Score=49.88  Aligned_cols=92  Identities=15%  Similarity=0.028  Sum_probs=67.8

Q ss_pred             hccCCceeeccCCcccccc-cc--------------------------------------cccccC-CCCCccc-e-EEE
Q psy1684          79 KDADGLCVNLRKPCVQVSC-RI--------------------------------------YLVHGT-NLSGVVV-S-AVD  116 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~~~-p~--------------------------------------~l~~~~-~~~~~~~-s-Vws  116 (189)
                      ++.-++.++|.++|+|.|+ |+                                      .|++|. +...|+. - .||
T Consensus       672 QIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWS  751 (888)
T KOG4236|consen  672 QILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWS  751 (888)
T ss_pred             HHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhcccccccccee
Confidence            3444688899999999985 66                                      222222 5566888 6 999


Q ss_pred             ec----------CCCCChHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         117 FG----------SGGMTNAEVLHQVEHGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       117 fG----------~~~~~~~~~~~~v~~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .|          |+-...++|-++|.+...+-+|   .+..++..+||..-++..-.+|-|..+-+.
T Consensus       752 VGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  752 VGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             eeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            99          5555677888899877655444   357788899999999999999999876543

>KOG4158|consensus

Probab=96.12  E-value=0.0036  Score=48.94  Aligned_cols=42  Identities=19%  Similarity=0.273  Sum_probs=34.2

Q ss_pred             HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         132 EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       132 ~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                      ++..-|+.|+.||+.+.+|+..-++.||++||+..-....|+
T Consensus       471 qe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  471 QESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             hhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            344457789999999999999999999999999775555443

>KOG0670|consensus

Probab=95.94  E-value=0.0046  Score=49.86  Aligned_cols=25  Identities=28%  Similarity=0.311  Sum_probs=21.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         146 RLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       146 ~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .+.+|+..|+..||++|-|..+.+.
T Consensus       721 ~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  721 QLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             HHHHHHHHHhccChhhcCCHHHHhc
Confidence            4668889999999999999887664

>KOG0984|consensus

Probab=95.63  E-value=0.0095  Score=42.61  Aligned_cols=50  Identities=22%  Similarity=0.147  Sum_probs=34.1

Q ss_pred             CcccccccccccccCCCCCccc-e-EEEec------------CCCC-ChHHHHHHHHcCCCCCCC
Q psy1684          91 PCVQVSCRIYLVHGTNLSGVVV-S-AVDFG------------SGGM-TNAEVLHQVEHGYRMPCP  140 (189)
Q Consensus        91 ~~~~~~~p~~l~~~~~~~~~~~-s-VwsfG------------~~~~-~~~~~~~~v~~g~~~~~p  140 (189)
                      +|-..++||.+-++.....|+. | |||+|            |+.+ ++.+.+.+|.+...|..|
T Consensus       210 GCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp  274 (282)
T KOG0984|consen  210 GCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP  274 (282)
T ss_pred             CCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence            4666677776666667778999 9 99999            6655 466767777554333333

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=95.45  E-value=0.003  Score=45.09  Aligned_cols=28  Identities=14%  Similarity=0.087  Sum_probs=16.8

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCC
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESR   33 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~   33 (189)
                      +.|+|++++++.....+..++|+++...
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221       54 LKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             CCCCChhhheeeeecCCceEEEEeccCC
Confidence            4566666666655444556666666554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG3697|consensus

Probab=94.61  E-value=0.098  Score=38.90  Aligned_cols=49  Identities=12%  Similarity=-0.022  Sum_probs=37.2

Q ss_pred             CCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhhhccC
Q psy1684          31 ESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYSKDAD   82 (189)
Q Consensus        31 ~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~~~a~   82 (189)
                      ...+|.|+|.-..  .+..+|..+. ..+| .-.+...|. +..||+|+..++.
T Consensus       276 ~~~~gqyvltgl~--~~~~khlllv-dpegvvrtkd~~fdsishli~yh~~~~l  326 (345)
T KOG3697|consen  276 TTTPGQYVLTGLQ--SGQPKHLLLV-DPEGVVRTKDRRFDSISHLINYHMDNHL  326 (345)
T ss_pred             cCCCccEEEeccc--CCCcceEEEE-CCccceecccchhhHHHHHHHHhhhccC
Confidence            4566888888888  8889998775 4556 555567788 9999999887654

>KOG1345|consensus

Probab=94.54  E-value=0.064  Score=40.10  Aligned_cols=93  Identities=13%  Similarity=-0.007  Sum_probs=55.4

Q ss_pred             hhhccCCceeeccCCcccccccc------------------cccccC----------------------CCCC--ccc-e
Q psy1684          77 YSKDADGLCVNLRKPCVQVSCRI------------------YLVHGT----------------------NLSG--VVV-S  113 (189)
Q Consensus        77 ~~~~a~gl~~~~~~~~~~~~~p~------------------~l~~~~----------------------~~~~--~~~-s  113 (189)
                      ..+.+.++.++|++.++|||+..                  |+++-.                      ..++  .+. +
T Consensus       127 ~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~  206 (378)
T KOG1345|consen  127 FAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPST  206 (378)
T ss_pred             HHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccc
Confidence            34556788999999999999754                  221111                      2333  456 7


Q ss_pred             -EEEec------CCCCCh-----------HHHHHHHHcCCCCCCCC---CCCHHHHHHHHHhcccCCCCC---CCHHHHH
Q psy1684         114 -AVDFG------SGGMTN-----------AEVLHQVEHGYRMPCPP---GCPPRLYDIMLECWLKDPVKR---PTFETLQ  169 (189)
Q Consensus       114 -VwsfG------~~~~~~-----------~~~~~~v~~g~~~~~p~---~~p~~~~~l~~~C~~~~p~~R---P~~~~i~  169 (189)
                       ||.||      ..|.-+           .+.. +-..+..+..|.   ...+....+.++-+..++++|   -+.++..
T Consensus       207 D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~-~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  207 DIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE-QWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR  285 (378)
T ss_pred             cchheeeeeeeeecCCCcchhhhccCchHHHHH-HHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence             99999      111111           1111 123344444453   355677788889999999999   4554443


Q ss_pred             H
Q psy1684         170 W  170 (189)
Q Consensus       170 ~  170 (189)
                      +
T Consensus       286 k  286 (378)
T KOG1345|consen  286 K  286 (378)
T ss_pred             H
Confidence            3

>KOG1266|consensus

Probab=94.27  E-value=0.014  Score=44.59  Aligned_cols=23  Identities=22%  Similarity=0.406  Sum_probs=19.8

Q ss_pred             HHHHHHhcccCCCCCCCHHHHHH
Q psy1684         148 YDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       148 ~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.++..|++..|..||++.+++.
T Consensus       308 r~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  308 RGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             cCcCcccccCCCCCCcchhhhhc
Confidence            36778999999999999998764

>KOG1240|consensus

Probab=93.88  E-value=0.0038  Score=54.48  Aligned_cols=27  Identities=30%  Similarity=0.358  Sum_probs=24.8

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..+++++..+++.||++|-++.+.++.
T Consensus       265 ~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  265 VSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccHHHHHHHHHccCchhccCHHHHHHh
Confidence            378999999999999999999999876

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=93.70  E-value=0.0044  Score=52.38  Aligned_cols=33  Identities=15%  Similarity=-0.116  Sum_probs=25.8

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~   99 (189)
                      .+.......+..+++.|+.++|...++|+|+ |+
T Consensus       100 ~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~  133 (669)
T cd05610         100 YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPD  133 (669)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHH
Confidence            3444455667778889999999999999996 55

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1290|consensus

Probab=93.05  E-value=0.052  Score=43.60  Aligned_cols=26  Identities=27%  Similarity=0.247  Sum_probs=23.2

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++.+++.-.++.+|.+|||+++.++
T Consensus       524 ~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  524 QQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHHHHHHHHhcCccccccHHHHhc
Confidence            46778899999999999999999985

>KOG0606|consensus

Probab=90.20  E-value=0.18  Score=44.41  Aligned_cols=57  Identities=21%  Similarity=0.111  Sum_probs=43.1

Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYRMPCPPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                      ...|.. . =|+.|            |.|-++++++..+..  ..-++-....|++.++++.+-+..||..|-
T Consensus       232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            344555 5 67877            788889998888743  344444456789999999999999999995

>KOG1033|consensus

Probab=89.87  E-value=0.22  Score=40.26  Aligned_cols=62  Identities=16%  Similarity=0.212  Sum_probs=38.9

Q ss_pred             CCCCccc-e-EEEec---CCCC----Ch---HHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         106 NLSGVVV-S-AVDFG---SGGM----TN---AEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG---~~~~----~~---~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                      .++.|+. + +||+|   |+-+    +.   ...+.-+++|.-+|.- .+. ++-+.|+.+.+..+|.+||++.+.
T Consensus       435 ~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  435 RGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             hhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence            6788999 9 99999   1111    11   2223345566544322 233 444689999999999999955543

>KOG1164|consensus

Probab=88.56  E-value=1.6  Score=33.52  Aligned_cols=40  Identities=25%  Similarity=0.210  Sum_probs=33.3

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         140 PPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       140 p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      ...+|.++.+++..+=..+..++|.-..+...|.......
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~  301 (322)
T KOG1164|consen  262 GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE  301 (322)
T ss_pred             cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence            3456788888888888899999999999999998887764

>KOG0608|consensus

Probab=87.48  E-value=0.4  Score=40.30  Aligned_cols=49  Identities=4%  Similarity=-0.135  Sum_probs=26.9

Q ss_pred             eEEEEEeccCC----ccCCCCCcCHhHHHHHhhhc-cCCceeeccCCcccccc-cc
Q psy1684          50 KMTTGRSLFET----QKAGRTTIHYPELVEHYSKD-ADGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        50 ~h~~i~~~~~g----yl~~~~~~~l~~li~~~~~~-a~gl~~~~~~~~~~~~~-p~   99 (189)
                      +-|.+.++.+|    .|-....| -.+|..||... .-++.+.|..+.||||+ |.
T Consensus       704 LYFVMdYIPGGDmMSLLIrmgIF-eE~LARFYIAEltcAiesVHkmGFIHRDiKPD  758 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRMGIF-EEDLARFYIAELTCAIESVHKMGFIHRDIKPD  758 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHhccceecccCcc
Confidence            34444455666    22223344 24455554432 23677788889999996 55

>KOG4566|consensus

Probab=82.84  E-value=4.5  Score=30.13  Aligned_cols=76  Identities=24%  Similarity=0.252  Sum_probs=48.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC------ccCCCC--CcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET------QKAGRT--TIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g------yl~~~~--~~~-l~   71 (189)
                      ||+|.....++...++.+  ..|.|+||++....-.+.|+++.  ....+..++..-++.      +.+...  .+. ..
T Consensus        54 ~~w~~~~~~~~~~~l~~~--p~~~~l~Rdss~~~~~~~I~vk~--~~g~~~~r~~~~~~sfr~ds~~~~~~pl~~~e~~~  129 (258)
T KOG4566|consen   54 HYWGLETANEAELCLGQE--PRGTFLVRDSSHRPYLFTISVKT--HSGPKNLRIQYQDSSFRLDSSHRHTPPLISFEDVE  129 (258)
T ss_pred             cccccccchhHHHhhcCC--CccceeeecCcCccccceeEeee--ccCCCCccccccccceecccccccCCCcccChhHH
Confidence            688888888887777766  67999999998876677888877  444444444433322      122222  333 56


Q ss_pred             HHHHHhhhc
Q psy1684          72 ELVEHYSKD   80 (189)
Q Consensus        72 ~li~~~~~~   80 (189)
                      .++.++.+.
T Consensus       130 ~~~~~y~~~  138 (258)
T KOG4566|consen  130 VLIHHYRQS  138 (258)
T ss_pred             HHHHhhhhh
Confidence            677766443

>KOG1163|consensus

Probab=82.56  E-value=8.3  Score=28.82  Aligned_cols=39  Identities=15%  Similarity=0.189  Sum_probs=32.0

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      ...|.|+.-.+.-|-..-=++-|...-|.+.+..++..-
T Consensus       250 ~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l  288 (341)
T KOG1163|consen  250 KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL  288 (341)
T ss_pred             CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence            467899999999999888889999888877777666653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	189
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-18
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-18
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-18
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-18
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-18
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-18
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-18
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-18
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-18
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-18
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-18
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-18
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-18
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-18
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-18
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-18
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-18
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-18
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-18
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-17
2dly_A	121	Solution Structure Of The Sh2 Domain Of Murine Fyn-		4e-16
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		8e-15
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-14
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-13
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-12
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-12
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-12
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-12
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-12
1blj_A	114	Nmr Ensemble Of Blk Sh2 Domain, 20 Structures Lengt		2e-12
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-12
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-12
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-12
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-12
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-12
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-12
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-12
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-12
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-12
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		7e-12
3a4o_X	286	Lyn Kinase Domain Length = 286		9e-12
1lck_A	175	Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine K		1e-11
4d8k_A	175	Crystal Structure Of A Sh3-Sh2 Domains Of A Lymphoc		1e-11
1x27_A	167	Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding S		1e-11
1lcj_A	109	Sh2 (Src Homology-2) Domain Of Human P56-Lck Tyrosi		1e-11
1lkk_A	105	Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex		2e-11
1bhh_B	103	Free P56lck Sh2 Domain Length = 103		2e-11
1bhf_A	108	P56lck Sh2 Domain Inhibitor Complex Length = 108		2e-11
1lkl_A	104	Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex		2e-11
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-11
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-11
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-11
3hck_A	107	Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domai		4e-11
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-11
3nhn_A	193	Crystal Structure Of The Src-Family Kinase Hck Sh3-		4e-11
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		5e-11
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-11
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		7e-11
1ijr_A	104	Crystal Structure Of Lck Sh2 Complexed With Nonpept		7e-11
1fbz_A	104	Structure-Based Design Of A Novel, Osteoclast-Selec		8e-11
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		8e-11
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		8e-11
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-11
3uf4_A	164	Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn P		8e-11
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-11
1kc2_A	103	Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c		1e-10
1nzl_A	103	Crystal Structure Of Src Sh2 Domain Bound To Doubly		1e-10
1sha_A	104	Crystal Structure Of The Phosphotyrosine Recognitio		1e-10
1skj_A	113	Cocrystal Structure Of Urea-Substituted Phosphopept		1e-10
1p13_A	102	Crystal Structure Of The Src Sh2 Domain Complexed W		1e-10
1is0_A	106	Crystal Structure Of A Complex Of The Src Sh2 Domai		1e-10
1bkl_A	113	Self-Associated Apo Src Sh2 Domain Length = 113		2e-10
1bkm_A	113	Cocrystal Structure Of D-Amino Acid Substituted Pho		2e-10
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-10
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-10
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		6e-10
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		6e-10
1a1a_A	107	C-Src (Sh2 Domain With C188a Mutation) Complexed Wi		6e-10
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		6e-10
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-10
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		7e-10
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		7e-10
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		7e-10
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		7e-10
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		7e-10
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-10
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-10
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-10
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		7e-10
1f1w_A	104	Src Sh2 Thref1trp Mutant Complexed With The Phospho		8e-10
4f59_A	112	Triple Mutant Src Sh2 Domain Length = 112		8e-10
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-09
1shd_A	107	Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein In		1e-09
1cwd_L	98	Human P56lck Tyrosine Kinase Complexed With Phospho		2e-09
1o4c_A	108	Crystal Structure Of Sh2 In Complex With Phosphate.		2e-09
1o41_A	108	Crystal Structure Of Sh2 In Complex With Ru78300. L		2e-09
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		3e-09
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		5e-09
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		6e-09
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-09
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-09
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-09
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		6e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		7e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		7e-09
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		7e-09
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		8e-09
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		8e-09
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-08
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-08
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		1e-08
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-08
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-08
1g83_A	165	Crystal Structure Of Fyn Sh3-Sh2 Length = 165		2e-08
1aot_F	106	Nmr Structure Of The Fyn Sh2 Domain Complexed With		3e-08
3eaz_A	106	Crystal Structure Of Sh2 Domain Of Human Csk (Carbo		3e-08
3eac_A	106	Crystal Structure Of Sh2 Domain Of Human Csk (Carbo		3e-08
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		4e-08
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		4e-08
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		5e-08
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-08
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		5e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		6e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		6e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		7e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		7e-08
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		8e-08
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-07
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-07
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-07
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-07
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-07
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-07
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-07
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-07
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-07
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-07
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		5e-07
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-07
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		9e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-06
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-06
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-06
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-06
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-06
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-06
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-06
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-06
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-06
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-06
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		3e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-06
1csy_A	112	Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed		5e-06
1a81_A	254	Crystal Structure Of The Tandem Sh2 Domain Of The S		5e-06
2ci9_A	102	Nck1 Sh2-Domain In Complex With A Dodecaphosphopept		5e-06
2oq1_A	254	Tandem Sh2 Domains Of Zap-70 With 19-Mer Zeta1 Pept		5e-06
1m61_A	259	Crystal Structure Of The Apo Sh2 Domains Of Zap-70		6e-06
2ci8_A	99	Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomple		6e-06
2ecd_A	119	Solution Structure Of The Human Abl2 Sh2 Domain Len		1e-05
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-05
1jwo_A	97	Crystal Structure Analysis Of The Sh2 Domain Of The		1e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-05
3t04_A	123	Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN C		2e-05
3k2m_A	112	Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN CO		2e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-05
2abl_A	163	Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine K		2e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-05
1ab2_A	109	Three-Dimensional Solution Structure Of The Src Hom		2e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		2e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-05
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		3e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-05
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		3e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		3e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-05
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		3e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-05
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		3e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		3e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		3e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-05
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-05
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-05
3us4_A	98	Crystal Structure Of A Sh2 Domain Of A Megakaryocyt		3e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-05
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-05
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-05
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-05
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		3e-05
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		3e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-05
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		3e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-05
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-05
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-05
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		3e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-05
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		4e-05
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-05
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-05
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		4e-05
3n84_A	112	Crystal Structure Of The Grb2 Sh2 Domain In Complex		4e-05
1fhs_A	112	The Three-Dimensional Solution Structure Of The Src		4e-05
3ove_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		4e-05
3imd_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		4e-05
2h46_E	116	Native Domain-Swapped Dimer Crystal Structure Of Th		4e-05
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		5e-05
1bm2_A	117	Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acet		5e-05
1x0n_A	104	Nmr Structure Of Growth Factor Receptor Binding Pro		5e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-05
1fyr_A	114	Dimer Formation Through Domain Swapping In The Crys		5e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		5e-05
1bmb_A	123	Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-9		5e-05
1ghu_A	107	Nmr Solution Structure Of Growth Factor Receptor-Bo		5e-05
3mxc_A	101	Structures Of Grb2-Sh2 Domain And Aicd Peptide Comp		6e-05
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		6e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		6e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-05
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		6e-05
2aoa_A	99	Crystal Structures Of A High-affinity Macrocyclic P		6e-05
1tze_E	98	Signal Transduction Adaptor Growth Factor, Grb2 Sh2		7e-05
1zfp_E	98	Growth Factor Receptor Binding Protein Sh2 Domain C		7e-05
1cj1_A	96	Growth Factor Receptor Binding Protein Sh2 Domain (		7e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		7e-05
1jyq_A	96	Xray Structure Of Grb2 Sh2 Domain Complexed With A		7e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		7e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		7e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		7e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-05
1gri_A	217	Grb2 Length = 217		8e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		8e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-04
2kk6_A	116	Solution Structure Of Sh2 Domain Of Proto-Oncogene		4e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
1rja_A	100	Solution Structure And Backbone Dynamics Of The Non		4e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		4e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		4e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		4e-04
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		4e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		4e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		4e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		4e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		4e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		4e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		5e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		5e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		5e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		5e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		7e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		8e-04
2ge9_A	125	Solution Structures Of The Sh2 Domain Of Bruton's T		8e-04
2cia_A	102	Human Nck2 Sh2-Domain In Complex With A Decaphospho		9e-04

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 44/57 (77%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT
Sbjct: 385 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 441

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 209 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 268
Query: 181 SDYK 184
             Y+
Sbjct: 269 PQYQ 272

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 207 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 266
Query: 181 SDYK 184
             Y+
Sbjct: 267 PQYQ 270

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW KDP +RPTFE LQ  LED+FT   
Sbjct: 218 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 181 SDYK 184
             Y+
Sbjct: 278 PQYQ 281

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 384 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
Query: 181 SDYK 184
             Y+
Sbjct: 444 PQYQ 447

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT
Sbjct: 467 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT
Sbjct: 384 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT
Sbjct: 384 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 215 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
Query: 181 SDYK 184
             Y+
Sbjct: 275 PQYQ 278

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 208 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 267
Query: 181 SDYK 184
             Y+
Sbjct: 268 PQYQ 271

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 211 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 270
Query: 181 SDYK 184
             Y+
Sbjct: 271 PQYQ 274

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 215 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
Query: 181 SDYK 184
             Y+
Sbjct: 275 PQYQ 278

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 45/64 (70%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCP  CP  L+++M+ CW KDP +RPTFE LQ  LED+FT   
Sbjct: 209 GMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATE 268
Query: 181 SDYK 184
             Y+
Sbjct: 269 PQYQ 272

>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine Fyn-Related Kinase Length = 121

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           W+FG IKR +AEK+LL  EN  GAFLIR+SES+K D+SLS   E     + ++       
Sbjct: 18  WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 77
Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
           F T++   +T++  E V +Y+  +DGLCV L KPC+++
Sbjct: 78  FLTRRKVFSTLN--EFVNYYTTTSDGLCVKLEKPCLKI 113

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM+N EV+  +E GYRMP P  CP  LY+IM+ CW   P +RPTFE +Q  L+DF+T   
Sbjct: 388 GMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
Query: 181 SDYKE 185
           S  +E
Sbjct: 448 SQXEE 452

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM+N EV+  +E GYRMP P  CP  LY+IM+ CW   P +RPTFE +Q  L+DF+T   
Sbjct: 372 GMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 431
Query: 181 SDYKE 185
           S  ++
Sbjct: 432 SQXQQ 436

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           GM+N EV+  +E GYRMP P  CP  LY+IM+ CW   P +RPTFE +Q  L+DF
Sbjct: 215 GMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 213 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
Query: 181 SDYK 184
             Y+
Sbjct: 273 GQYQ 276

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 213 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
Query: 181 SDYK 184
             Y+
Sbjct: 273 GQYQ 276

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 221 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 280
Query: 181 SDYK 184
             Y+
Sbjct: 281 GQYQ 284

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 219 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 278
Query: 181 SDYK 184
             Y+
Sbjct: 279 GQYQ 282

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 223 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 282
Query: 181 SDYK 184
             Y+
Sbjct: 283 GQYQ 286

>pdb|1BLJ|A Chain A, Nmr Ensemble Of Blk Sh2 Domain, 20 Structures Length = 114

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
           W+F  I R +AE++LL P N  G+FLIR+SES K  +SLS  +       +K    RSL 
Sbjct: 14  WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73
Query: 59  ETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPCVQVS 96
                    I +P    LV+HYSK  DGLC  L  PCV ++
Sbjct: 74  NGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLPCVNLA 114

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 208 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 264

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 209 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 265

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 213 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 213 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 214 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 270

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 219 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 275

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 218 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 274

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 215 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 271

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 222 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 281
Query: 181 SDYK 184
             ++
Sbjct: 282 GQFQ 285

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G TNA+V+  +  GYRMP    CP  LYDIM  CW +   +RPTF+ LQ  L+DF+T   
Sbjct: 213 GRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATE 272
Query: 181 SDYKE 185
             Y++
Sbjct: 273 GQYQQ 277

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G TNA+V+  +  GYRMP    CP  LYDIM  CW +   +RPTF+ LQ  L+DF+T   
Sbjct: 214 GRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATE 273
Query: 181 SDYKE 185
             Y++
Sbjct: 274 GQYQQ 278

>pdb|1LCK|A Chain A, Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine Kinase Complexed With The 10 Residue Synthetic Phosphotyrosyl Peptide Tegqpyqpqpa Length = 175

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 76  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 136 DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 173

>pdb|4D8K|A Chain A, Crystal Structure Of A Sh3-Sh2 Domains Of A Lymphocyte-Specific Protein Tyrosine Kinase (Lck) From Homo Sapiens At 2.36 A Resolution Length = 175

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 76  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 136 DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 173

>pdb|1X27|A Chain A, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of P130cas Length = 167

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 68  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 127
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 128 DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 165

>pdb|1LCJ|A Chain A, Sh2 (Src Homology-2) Domain Of Human P56-Lck Tyrosine Kinase Complexed With The 11 Residue Phosphotyrosyl Peptide Epqpyeeipiyl Length = 109

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 10  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 69
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 70  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 107

>pdb|1LKK|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Ile (Pyeei Peptide) Length = 105

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 6   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 66  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 103

>pdb|1BHH|B Chain B, Free P56lck Sh2 Domain Length = 103

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 4   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 63
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 64  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 101

>pdb|1BHF|A Chain A, P56lck Sh2 Domain Inhibitor Complex Length = 108

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 9   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 68
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 69  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 106

>pdb|1LKL|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Gly (Pyeeg Peptide) Length = 104

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 5   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 64
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 65  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 102

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E 
Sbjct: 218 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 277
Query: 181 SDYKE 185
           +  +E
Sbjct: 278 AQQEE 282

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E 
Sbjct: 217 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 276
Query: 181 SDYKE 185
           +  +E
Sbjct: 277 AQQEE 281

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E 
Sbjct: 212 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 271
Query: 181 SDYKE 185
           +  +E
Sbjct: 272 AQQEE 276

>pdb|3HCK|A Chain A, Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domain, 20 Structures Length = 107

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYK-RSSFCLKMTTGRSL 57
           W+F  I R +AE++LL P N  G+F+IRDSE+ K  YSLS  +Y  R    +K    R+L
Sbjct: 6   WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 65
Query: 58  -----FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCV 93
                + + ++  +T+   ELV+HY K  DGLC  L  PC+
Sbjct: 66  DNGGFYISPRSTFSTLQ--ELVDHYKKGNDGLCQKLSVPCM 104

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 595 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653

>pdb|3NHN|A Chain A, Crystal Structure Of The Src-Family Kinase Hck Sh3-Sh2-Linker Regulatory Region Length = 193

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYK-RSSFCLKMTTGRSL 57
           W+F  I R +AE++LL P N  G+F+IRDSE+ K  YSLS  +Y  R    +K    R+L
Sbjct: 73  WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 132
Query: 58  -----FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCV 93
                + + ++  +T+   ELV+HY K  DGLC  L  PC+
Sbjct: 133 DNGGFYISPRSTFSTLQ--ELVDHYKKGNDGLCQKLSVPCM 171

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 595 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E 
Sbjct: 220 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279
Query: 181 SD 182
           + 
Sbjct: 280 AQ 281

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E 
Sbjct: 243 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 302
Query: 181 SD 182
           + 
Sbjct: 303 AQ 304

>pdb|1IJR|A Chain A, Crystal Structure Of Lck Sh2 Complexed With Nonpeptide Phosphotyrosine Mimetic Length = 104

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    + LS     +     +K    R+L
Sbjct: 5   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNL 64
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 65  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 102

>pdb|1FBZ|A Chain A, Structure-Based Design Of A Novel, Osteoclast-Selective, Nonpeptide Src Sh2 Inhibitor With In Vivo Anti-Resorptive Activity Length = 104

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
           W+F  + R +AE++LL P N HG+FLIR+SES    + LS     +     +K    R+L
Sbjct: 5   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNL 64
Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPC 92
                     I +P   ELV HY+  +DGLC  L +PC
Sbjct: 65  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 102

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273

>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein (Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus Musculus At 1.98 A Resolution Length = 164

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 69  WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDXKGDHVKHYKIRKL 128
Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNL 88
             G   + T +A   T+   +LV+HYS+ ADGLC NL
Sbjct: 129 DNG-GYYITTRAQFETLQ--QLVQHYSEKADGLCFNL 162

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273

>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala, Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The Pqpyeeipi Peptide Length = 103

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y LS    S+F        + ++ 
Sbjct: 4   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSV---SAFANAKGLNVAHYKI 60
Query: 61  QK--------AGRTTI-HYPELVEHYSKDADGLCVNLRKPC 92
           +K          RT      +LV +YSK ADGLC  L   C
Sbjct: 61  RKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVC 101

>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly Phosphorylated Peptide Pqpyepyipi Length = 103

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 4   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 63
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 64  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 101

>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition Domain Sh2 Of V-Src Complexed With Tyrosine-Phosphorylated Peptides Length = 104

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 5   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 65  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 102

>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 6   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 66  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 103

>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With Peptide (Sdpyanfk) Length = 102

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 4   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 63
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 64  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 101

>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With Conformationally Constrained Peptide Inhibitor Length = 106

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 5   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 65  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 102

>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain Length = 113

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E  LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 6   WYFGKITRRESESLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 66  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 103

>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E  LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 6   WYFGKITRRESEALLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +   +++   +LV +YSK ADGLC  L   C
Sbjct: 66  DSGGFYITSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 103

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           MTN +V+  VE GYR+P P GCP  L+ +ML+CW KD  +RP F  +
Sbjct: 258 MTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           MTN +V+  VE GYR+P P GCP  L+ +ML+CW KD  +RP F  +
Sbjct: 258 MTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 225 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 284

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 225 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 284

>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine) Length = 107

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSL--SEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  YSL  S++  +       + ++  
Sbjct: 9   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYKIRKL 68
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +    ++   +LV +YSK ADGLC  L   C
Sbjct: 69  DSGGFYITSRTQFNSLQ--QLVAYYSKHADGLCHRLTTVC 106

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 242 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 301

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 252 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 311

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGS 181
           M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      GS
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313

>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The Phosphopeptide S(Ptr)vnvqn Length = 104

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL PEN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 5   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                +   +   +++   +LV +YSK ADGLC  L   C
Sbjct: 65  DSGGFYIWSRTQFSSLQ--QLVAYYSKHADGLCHRLTNVC 102

>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain Length = 112

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSL--SEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y+L  S++  +       + ++  
Sbjct: 11  WYFGKITRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKL 70
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +    ++   +LV +YSK ADGLC  L   C
Sbjct: 71  DSGGFYITSRTQFNSLQ--QLVAYYSKHADGLCHRLTTVC 108

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           +V+ +VE GY+M  P GCPP +YD+M  CW  D   RPTF  L+ +LE   T E
Sbjct: 394 DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447

>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein Interactions Length = 107

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 9   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 68
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +    ++   +LV +YSK ADGLC  L   C
Sbjct: 69  DSGGFYITSRTQFNSLQ--QLVAYYSKHADGLCHRLTTVC 106

>pdb|1CWD|L Chain L, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide Length = 98

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
          W+F  + R +AE++LL P N HG+FLIR+SES    +SLS     +     +K    R+L
Sbjct: 3  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 62
Query: 58 FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRK 90
                    I +P   ELV HY+  +DGLC  L +
Sbjct: 63 DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSR 98

>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate. Length = 108

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 7   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYKIRKL 66
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +    ++   +LV +YSK ADGLC  L   C
Sbjct: 67  DSGGFYITSRTQFNSLQ--QLVAYYSKHADGLCHRLTTVC 104

>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300. Length = 108

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY--SLSEYKRSS------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y  S+S++  +       + ++  
Sbjct: 7   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 66
Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + T +    ++   +LV +YSK ADGLC  L   C
Sbjct: 67  DSGGFYITSRTQFNSLQ--QLVAYYSKHADGLCHRLTTVC 104

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           MTN +V+  VE GYR+P P  CP  LY +ML+CW K+   RP F+ +
Sbjct: 231 MTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEI 277

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 211 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 266

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 213 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 217 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 217 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           M+N +V+  +E GYR+P P  CP  L+ +ML+CW K+  +RP FE +
Sbjct: 252 MSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQI 298

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 223 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 576 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 631

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 575 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 231 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 286

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 233 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 233 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           +V+ +VE GY+M  P GCPP +Y++M  CW  D   RP+F  L+ +LE   T E
Sbjct: 222 DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+N +V++ +E  YR+P PP CP  L+ +ML+CW KD   RP F
Sbjct: 227 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 270

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+N +V++ +E  YR+P PP CP  L+ +ML+CW KD   RP F
Sbjct: 225 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 268

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           +V+ +VE GY+M  P GCPP +Y++M  CW  D   RP+F  L+ +LE   T E
Sbjct: 213 DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 266

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           +V+ +VE GY+M  P GCPP +Y++M  CW  D   RP+F  L+ +LE   T E
Sbjct: 207 DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 260

>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2 Length = 165

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 68  WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 127
Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
             G   + T +A   T+   +LV+HYS+ A GL   L  P 
Sbjct: 128 DNG-GYYITTRAQFETLQ--QLVQHYSERAAGLSSRLVVPS 165

>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A Phosphotyrosyl Peptide, Minimized Average Structure Length = 106

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------EYKRSSFCLKM 51
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS         ++ +     K+
Sbjct: 7   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 66
Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
             G   + T +A   T+   +LV+HYS+ A GL   L  P 
Sbjct: 67  DNG-GYYITTRAQFETLQ--QLVQHYSERAAGLSSRLVVPS 104

>pdb|3EAZ|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl- Terminal Src Kinase), C122s Mutant Length = 106

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           W+ GKI R +AE+ L  PE   G FL+R+S +   DY+L      S   K+   R ++  
Sbjct: 10  WFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLC----VSSDGKVEHYRIMYHA 63
Query: 61  QKAGRTTIHYPE----LVEHYSKDADGLCVNLRKPCV 93
            K       Y E    LVEHY+ DADGLC  L KP V
Sbjct: 64  SKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKV 100

>pdb|3EAC|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl- Terminal Src Kinase), Oxidized Form Length = 106

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           W+ GKI R +AE+ L  PE   G FL+R+S +   DY+L      S   K+   R ++  
Sbjct: 10  WFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLC----VSCDGKVEHYRIMYHA 63
Query: 61  QKAGRTTIHYPE----LVEHYSKDADGLCVNLRKPCV 93
            K       Y E    LVEHY+ DADGLC  L KP V
Sbjct: 64  SKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKV 100

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
            G+ NAE+ + +  G R+  PP C   +YD+M +CW  DP +RP+F  L+ +LE+  
Sbjct: 241 AGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           + N +V+  +E G R+P P  CPP LY +M  CW  DP  RP F  L   L D + ME
Sbjct: 230 LENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 287

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           + N +V+  +E G R+P P  CPP LY +M  CW  DP  RP F  L   L D + ME
Sbjct: 218 LENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 85  CVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSG---GMTNAEVLHQVEHGYRMPCPP 141
           C+N RK   +     Y V        +  A+ +G      M   EV+  +E G RM CPP
Sbjct: 184 CINFRKFSSRSDVWSYGV-------TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 236
Query: 142 GCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
            CPP LY +M +CW+     RP F T++ ++
Sbjct: 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           + N +V+  +E G R+P P  CPP LY +M  CW  DP  RP F  L   L D + ME
Sbjct: 214 LENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 271

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           MTN +V++ +E  YR+P P  CP  L+ +ML+CW KD   RP F
Sbjct: 218 MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 261

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+ N E+   + HG+R+  P  C   LY+IM  CW  DP+ RPTF  L+ +LE   
Sbjct: 252 GVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E GYRM  P GCPP++Y++M  CW   P  RP+F       E  F
Sbjct: 234 GIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMF 289

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           MTN +V++ +E  YR+P P  CP  L+ +ML+CW KD   RP F
Sbjct: 244 MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 287

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 85  CVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDFGSG---GMTNAEVLHQVEHGYRMPCPP 141
           C+N RK   +     Y V        +  A+ +G      M   EV+  +E G RM CPP
Sbjct: 510 CINFRKFSSRSDVWSYGV-------TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 562
Query: 142 GCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
            CPP LY +M +CW+     RP F T++ ++
Sbjct: 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+N +V+  +E GYR+P P  CP  L+ +ML+CW K+   RP F
Sbjct: 223 MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 266

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+N +V+  +E GYR+P P  CP  L+ +ML+CW K+   RP F
Sbjct: 238 MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 281

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           M+N +V+  +E GYR+P P  CP  L+ +ML+CW K+   RP F
Sbjct: 217 MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 260

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G MT   +++ ++ G R+PCPP CP  +Y +M +CW   P  R +F+ L
Sbjct: 233 GQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 281

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G MT   +++ ++ G R+PCPP CP  +Y +M +CW   P  R +F+ L
Sbjct: 245 GQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           ++N EV+  +  G+R+P P  CP  +Y +M++CW ++  +RP F  +
Sbjct: 254 LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADI 300

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 221 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 270

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 221 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 270

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 227 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 276

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 227 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 276

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 422 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 461 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 516

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 213 GIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 213 GIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 213 GIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           ++N +    VE G R+PCP  CP  ++ +M +CW  +P +RP+F T+  +L+  
Sbjct: 319 LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 272

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 272

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           ++N +    VE G R+PCP  CP  ++ +M +CW  +P +RP+F T+  +L+  
Sbjct: 319 LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +
Sbjct: 244 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 291

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 228 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 283

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +
Sbjct: 241 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 288

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +
Sbjct: 234 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 281

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 216 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 271

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 272

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 216 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 271

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 219 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 274

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 126 EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY 183
           ++ H +  G R+P P  CP  LY +M +CW  DP  RPTF  L  ++E   +    D+
Sbjct: 236 DLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           G +N +V+  + +   +PCP  CP  +Y +M+ECW + P +RP F+ +  +L
Sbjct: 233 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G   +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL 172
           G +N +V+  + +   +PCP  CP  +Y +M+ECW + P +RP F+ +  +L
Sbjct: 250 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G   +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 266 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G   +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 268 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G   +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G   +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           GM + EV++ V  G  + CP  CP  LY++M  CW K P  RP+F ++   L+
Sbjct: 279 GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331

>pdb|1CSY|A Chain A, Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed With A Phosphopeptidefrom The Gamma Chain Of The High Affinity Immunoglobin G Receptor, Nmr Length = 112

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL--- 57
           W+ GKI R E+E+ +L+    +G FLIR   +R N+ S       + CL +  G+ L   
Sbjct: 15  WFHGKISREESEQIVLIGSKTNGKFLIR---ARDNNGSY------ALCL-LHEGKVLHYR 64
Query: 58  FETQKAGRTTIHYPE---------LVEHYSKDADGLCVNLRKPCVQVSCR 98
            +  K G+ +I  PE         LVEHYS  ADGL   L  PC ++  +
Sbjct: 65  IDKDKTGKLSI--PEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQKIGTQ 112

>pdb|1A81|A Chain A, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam Length = 254

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 24/107 (22%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL--- 57
           W+ GKI R E+E+ +L+    +G FLIR   +R N+ S       + CL +  G+ L   
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIR---ARDNNGSY------ALCL-LHEGKVLHYR 209
Query: 58  FETQKAGRTTIHYPE---------LVEHYSKDADGLCVNLRKPCVQV 95
            +  K G+ +I  PE         LVEHYS  ADGL   L  PC ++
Sbjct: 210 IDKDKTGKLSI--PEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQKI 254

>pdb|2CI9|A Chain A, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide From Epec Protein Tir Length = 102

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 28/92 (30%)
Query: 1  WYFGKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLS------------EYKRSSF 47
          WY+GK+ R +AE  + L E  H G FLIRDSES  ND+S+S            + K + +
Sbjct: 7  WYYGKVTRHQAE--MALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVY 64
Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHYSK 79
          C+    G+  F T +         ELVEHY K
Sbjct: 65 CI----GQRKFSTME---------ELVEHYKK 83

>pdb|2OQ1|A Chain A, Tandem Sh2 Domains Of Zap-70 With 19-Mer Zeta1 Peptide Length = 254

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           +++G I R EAE+ L L     G FL+R        Y LS      F       R L  T
Sbjct: 8   FFYGSISRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLVHDVRF-HHFPIERQLNGT 66
Query: 61  QK--AGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS 96
                G+      EL E YS+D DGL  NLRKPC + S
Sbjct: 67  YAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPS 104

>pdb|1M61|A Chain A, Crystal Structure Of The Apo Sh2 Domains Of Zap-70 Length = 259

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           +++G I R EAE+ L L     G FL+R        Y LS      F       R L  T
Sbjct: 13  FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRF-HHFPIERQLNGT 71
Query: 61  QK--AGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS 96
                G+      EL E YS+D DGL  NLRKPC + S
Sbjct: 72  YAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPS 109

>pdb|2CI8|A Chain A, Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomplexed Length = 99

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 28/92 (30%)
Query: 1  WYFGKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLS------------EYKRSSF 47
          WY+GK+ R +AE  + L E  H G FLIRDSES  ND+S+S            + K + +
Sbjct: 3  WYYGKVTRHQAE--MALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVY 60
Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHYSK 79
          C+    G+  F T +         ELVEHY K
Sbjct: 61 CI----GQRKFSTME---------ELVEHYKK 79

>pdb|2ECD|A Chain A, Solution Structure Of The Human Abl2 Sh2 Domain Length = 119

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           WY G + R  AE   LL    +G+FL+R+SES     S+S   E +   + +  T    +
Sbjct: 18  WYHGPVSRSAAE--YLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKV 75
Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
           + T ++  +T+   ELV H+S  ADGL   L  P 
Sbjct: 76  YVTAESRFSTL--AELVHHHSTVADGLVTTLHYPA 108

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G   + +   ++  G RM  P    P +Y IML+CW +DP +RP F  L  KL D  
Sbjct: 304 GVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360

>pdb|1JWO|A Chain A, Crystal Structure Analysis Of The Sh2 Domain Of The Csk Homologous Kinase Chk Length = 97

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+ GKI   EA ++L  PE+  G FL+R+S     DY L      SF   +   R L   
Sbjct: 6  WFHGKISGQEAVQQLQPPED--GLFLVRESARHPGDYVLC----VSFGRDVIHYRVL--- 56
Query: 61 QKAGRTTI-------HYPELVEHYSKDADGLCVNLRKP 91
           + G  TI       +  ++VEHYSKD   +C  L +P
Sbjct: 57 HRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRP 94

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +
Sbjct: 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +
Sbjct: 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317

>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN COMPLEX Length = 123

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGR--SL 57
           WY G + R  AE   LL    +G+FL+R+SES     S+S  Y+   +  ++ T     L
Sbjct: 18  WYHGPVSRNAAE--YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 75
Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
           + + ++   T+   ELV H+S  ADGL   L  P 
Sbjct: 76  YVSSESRFNTL--AELVHHHSTVADGLITTLHYPA 108

>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX Length = 112

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGR--SL 57
          WY G + R  AE   LL    +G+FL+R+SES     S+S  Y+   +  ++ T     L
Sbjct: 7  WYHGPVSRNAAE--YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 64
Query: 58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
          + + ++   T+   ELV H+S  ADGL   L  P 
Sbjct: 65 YVSSESRFNTL--AELVHHHSTVADGLITTLHYPA 97

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +
Sbjct: 265 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313

>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase Length = 163

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRS--L 57
           WY G + R  AE   LL    +G+FL+R+SES     S+S  Y+   +  ++ T     L
Sbjct: 72  WYHGPVSRNAAE--YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 129
Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
           + + ++   T+   ELV H+S  ADGL   L  P 
Sbjct: 130 YVSSESRFNTL--AELVHHHSTVADGLITTLHYPA 162

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +
Sbjct: 257 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305

>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology 2 Domain Of C-Abl Length = 109

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRS--L 57
           WY G + R  AE   LL    +G+FL+R+SES     S+S  Y+   +  ++ T     L
Sbjct: 11  WYHGPVSRNAAE--YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 68
Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
           + + ++   T+   ELV H+S  ADGL   L  P 
Sbjct: 69  YVSSESRFNTL--AELVHHHSTVADGLITTLHYPA 101

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 115 VDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           +    G MT   +   +E G R+P P  CP  +Y +M  CW  +   RPTFE L
Sbjct: 248 IGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +
Sbjct: 271 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 200 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 259
Query: 165 FETL 168
           F  L
Sbjct: 260 FREL 263

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 265
Query: 165 FETL 168
           F  L
Sbjct: 266 FREL 269

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 207 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 266
Query: 165 FETL 168
           F  L
Sbjct: 267 FREL 270

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 231 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 290
Query: 165 FETL 168
           F  L
Sbjct: 291 FREL 294

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 265
Query: 165 FETL 168
           F  L
Sbjct: 266 FREL 269

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 268
Query: 165 FETL 168
           F  L
Sbjct: 269 FREL 272

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +
Sbjct: 263 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 212 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 271
Query: 165 FETL 168
           F  L
Sbjct: 272 FREL 275

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 272
Query: 165 FETL 168
           F  L
Sbjct: 273 FREL 276

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 210 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 269
Query: 165 FETL 168
           F  L
Sbjct: 270 FREL 273

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 207 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 266
Query: 165 FETL 168
           F  L
Sbjct: 267 FREL 270

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 268
Query: 165 FETL 168
           F  L
Sbjct: 269 FREL 272

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 267
Query: 165 FETL 168
           F  L
Sbjct: 268 FREL 271

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 272
Query: 165 FETL 168
           F  L
Sbjct: 273 FREL 276

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 265
Query: 165 FETL 168
           F  L
Sbjct: 266 FREL 269

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 268
Query: 165 FETL 168
           F  L
Sbjct: 269 FREL 272

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 240 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 299
Query: 165 FETL 168
           F  L
Sbjct: 300 FREL 303

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 272
Query: 165 FETL 168
           F  L
Sbjct: 273 FREL 276

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 272
Query: 165 FETL 168
           F  L
Sbjct: 273 FREL 276

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 203 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 262
Query: 165 FETL 168
           F  L
Sbjct: 263 FREL 266

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 265
Query: 165 FETL 168
           F  L
Sbjct: 266 FREL 269

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 267
Query: 165 FETL 168
           F  L
Sbjct: 268 FREL 271

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 265
Query: 165 FETL 168
           F  L
Sbjct: 266 FREL 269

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 267
Query: 165 FETL 168
           F  L
Sbjct: 268 FREL 271

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 238 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 292

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 257 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 240 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 294

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 277 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287

>pdb|3US4|A Chain A, Crystal Structure Of A Sh2 Domain Of A Megakaryocyte-Associated Tyrosine Kinase (Matk) From Homo Sapiens At 1.50 A Resolution Length = 98

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+ GKI   EA ++L  PE+  G FL+R+S     DY L      SF   +   R L   
Sbjct: 7  WFHGKISGQEAVQQLQPPED--GLFLVRESARHPGDYVLC----VSFGRDVIHYRVL--- 57
Query: 61 QKAGRTTI-------HYPELVEHYSKDADGLCVNLRKP 91
           + G  TI       +  + VEHYSKD   +C  L +P
Sbjct: 58 HRDGHLTIDEAVFFCNLXDXVEHYSKDKGAICTKLVRP 95

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 290

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP 
Sbjct: 210 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK 269
Query: 165 FETL 168
           F  L
Sbjct: 270 FREL 273

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 239 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 293

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 251 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 234 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 268 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 291 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 251 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 290

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 251 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 251 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 265 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 264 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 251 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 265 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 265 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 267 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 232 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++  
Sbjct: 231 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++
Sbjct: 237 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 291

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 250 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 250 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           TN+EV+ +V  G+R+  P      +Y IM  CW + P KRPTF+ L   +E
Sbjct: 210 TNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E
Sbjct: 242 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292

>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A 23-Membered Macrocyclic Ligand Having The Sequence Pyvnvp Length = 112

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 9  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 47

>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src Homology Domain-2 Of The Growth Factor Receptor Bound Protein-2, Nmr, 18 Structures Length = 112

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 9  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 47

>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Pyxn- Derived Tripeptide Length = 117

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 46

>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic Length = 117

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 46

>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2 Sh2 Domain Length = 116

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 46

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 112 VSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           +  +    G MT   +   +E G R+P P  CP  +Y +M  CW  +   RPTFE L
Sbjct: 228 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284

>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acetyl-L-Thi Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl] (Pkf273-791) Length = 117

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 14 WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 52

>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein Sh2 Domain Complexed With The Inhibitor Length = 104

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 43

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 112 VSAVDFGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           +  +    G MT   +   +E G R+P P  CP  +Y +M  CW  +   RPTFE L
Sbjct: 228 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 134 GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G R+P PP CP  ++++M  CW   P  RP+F  L  +L+  ++
Sbjct: 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303

>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal Structure Of The Grb2-Sh2 Ac-Pyvnv Complex Length = 114

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 13 WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 51

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 134 GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G R+P PP CP  ++++M  CW   P  RP+F  L  +L+  ++
Sbjct: 247 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 290

>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974) Length = 123

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 15 WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 53

>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound Protein 2 (Grb2) Sh2 Domain, 24 Structures Length = 107

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 3  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 41

>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes Reveal A Conformational Switch And Their Functional Implications. Length = 101

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 9  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 47

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G+    + + ++ G+RM  P  C   +Y +ML+CW ++P KRP F  +   LE    
Sbjct: 255 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G+    + + ++ G+RM  P  C   +Y +ML+CW ++P KRP F  +   LE    
Sbjct: 255 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 134 GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G R+P PP CP  ++++M  CW   P  RP+F  L  +L+  ++
Sbjct: 248 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 291

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G+    + + ++ G+RM  P  C   +Y +ML+CW ++P KRP F  +   LE    
Sbjct: 255 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide Mimetic In Complex With The Grb2 Sh2 Domain Length = 99

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 6  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 44

>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain Complexed With Phosphotyrosyl Heptapeptide Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2) Length = 98

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 6  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 44

>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain Complexed With A Phosphotyrosyl Pentapeptide Length = 98

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 43

>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain (Human) Complexed With A Phosphotyrosyl Derivative Length = 96

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 4  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 42

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM +CW+ D   RP 
Sbjct: 216 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK 275
Query: 165 FETL 168
           F  L
Sbjct: 276 FREL 279

>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly Affine Phospho Peptide Length = 96

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 43

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM +CW+ D   RP 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK 265
Query: 165 FETL 168
           F  L
Sbjct: 266 FREL 269

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM +CW+ D   RP 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK 267
Query: 165 FETL 168
           F  L
Sbjct: 268 FREL 271

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM +CW+ D   RP 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK 267
Query: 165 FETL 168
           F  L
Sbjct: 268 FREL 271

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 109 GVVV-SAVDFGS---GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           GV V   + FGS    G+  +E+   +E G R+P PP C   +Y IM +CW+ D   RP 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK 268
Query: 165 FETL 168
           F  L
Sbjct: 269 FREL 272

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          W+FGKI R +AE+ L    +D GAFLIR+SES   D+SLS
Sbjct: 60 WFFGKIPRAKAEEMLSKQRHD-GAFLIRESESAPGDFSLS 98

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 134 GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G R+P PP CP  ++++M  CW   P  RP+F  L  +L+  ++
Sbjct: 244 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 287

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 251 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 308

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 254 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 311

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 249 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 306

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 234 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 308 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 232 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 236 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 81  ADGLCVNLRKPCVQVSCRIYLVHGTNL--SGVVV-SAVDFGS---GGMTNAEVLHQVEHG 134
           ADG  V ++   ++   R    H +++   GV V   + FG+    G+   E+   +E G
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG 237
Query: 135 YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
            R+P PP C   +Y IM++CW+ D   RP F  L
Sbjct: 238 ERLPQPPICTIDVYMIMVKCWMIDSECRPRFREL 271

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G++N +VL  V  G  +  P  CP R+ D+M  CW  +P  RPTF  +   L+D
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G+   E+   +E G R+P PP C   +Y +M++CW+ D   RP F+ L
Sbjct: 222 GIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 269

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G+   E+   +E G R+P PP C   +Y +M++CW+ D   RP F+ L
Sbjct: 245 GIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 292

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
            G MT   +   +E G R+P P  CP  +Y +M  CW  +   RPTF+ L
Sbjct: 230 QGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNL 279

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
            G MT   +   +E G R+P P  CP  +Y +M  CW  +   RPTF+ L
Sbjct: 229 QGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNL 278

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 297

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 296 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 344

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 298 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 303 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 351

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 305 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 353

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 132 EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           E G R   P  CPPRL +++  CW  DP KRP F  +  +L + 
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 132 EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           E G R   P  CPPRL +++  CW  DP KRP F  +  +L + 
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene Tyrosine- Protein Kinase Fer From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target Hr3461d Length = 116

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY---KRSSFCLKMTTGRSL 57
          WY G I RIEA++ L       G FL+R+S  +  +Y LS Y   +R  F ++       
Sbjct: 19 WYHGAIPRIEAQELL----KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYR 74
Query: 58 FETQKAGRTTIHYPELVEHY 77
          FE    G    + P+L++H+
Sbjct: 75 FE----GTGFSNIPQLIDHH 90

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292

>pdb|1RJA|A Chain A, Solution Structure And Backbone Dynamics Of The Nonreceptor Tyrosine Kinase Ptk6BRK SH2 DOMAIN Length = 100

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS----EYKRSSFCLKMTTGRS 56
          W+FG I R EA ++L    N  GAFLIR SE    DY LS    +  R     +   GR 
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRL 63
Query: 57 LFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                   + +  PELV ++   +    + L  PC
Sbjct: 64 HLNE---AVSFLSLPELVNYHRAQSLSHGLRLAAPC 96

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 132 EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           E G R   P  CPPRL +++  CW  DP KRP F  +  +L + 
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 265 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 309

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 237 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 237 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 234 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 278

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 233 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 277

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 297

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 247 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 304

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 230 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 274

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 236 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 290 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           ++N E +  +  G  +  P  CPP +Y IM  CW ++P +R + + +  +L+
Sbjct: 264 LSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 255 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 303

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 236 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 248 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 305

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 244 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 301

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 296 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 240 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           ++N E +  +  G  +  P  CPP +Y IM  CW ++P +R + + +  +L+
Sbjct: 235 LSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 286

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF 165
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F
Sbjct: 243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           ++N E +  +  G  +  P  CPP +Y IM  CW ++P +R + + +  +L+
Sbjct: 241 LSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 292

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 139 CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           CPP CPP  + I + C   DP KRP+F  L+  LE
Sbjct: 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKR 162
           ++N EV+  +  G  +  P  CP  +YD+ML CW ++P +R
Sbjct: 239 LSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQR 279

>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine Kinase Length = 125

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---------FCLKM 51
           WY   + R +AE+ LL  E   G F++RDS S+   Y++S + +S+         + +  
Sbjct: 13  WYSKHMTRSQAEQ-LLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCS 70
Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           T     +  +K   +TI  PEL+ ++  ++ GL   L+ P  Q
Sbjct: 71  TPQSQYYLAEKHLFSTI--PELINYHQHNSAGLISRLKYPVSQ 111

>pdb|2CIA|A Chain A, Human Nck2 Sh2-Domain In Complex With A Decaphosphopeptide From Translocated Intimin Receptor (Tir) Of Epec Length = 102

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          WY+G + R +AE  L       G FLIRDSES  +D+S+S        LK +     F+ 
Sbjct: 7  WYYGNVTRHQAECALN-ERGVEGDFLIRDSESSPSDFSVS--------LKASGKNKHFKV 57
Query: 61 QKA------GRTTIH-YPELVEHYSK 79
          Q        G+   H   ELVEHY K
Sbjct: 58 QLVDNVYCIGQRRFHTMDELVEHYKK 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	189
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-34
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-34
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-32
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-25
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-32
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-32
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-32
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-31
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-25
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-18
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-31
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-31
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-31
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-31
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-23
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-31
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-24
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-31
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-31
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-30
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-30
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-30
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-21
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-30
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-29
2dly_A	121	FYN-related kinase; BRK family kinase, structural	2e-29
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	4e-29
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	4e-29
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	5e-29
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-28
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-28
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	2e-28
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-28
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-28
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-28
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-28
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	3e-28
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-28
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	4e-28
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-28
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-28
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-28
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-28
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-28
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-28
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-27
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-27
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-27
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-23
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-27
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	3e-27
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-27
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-27
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-27
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-27
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-26
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	1e-26
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-26
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	1e-26
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-26
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-26
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	5e-26
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-26
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	8e-26
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	8e-26
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	8e-26
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-25
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	1e-25
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-25
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-25
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	2e-25
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	6e-25
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-25
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	8e-25
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	9e-25
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	1e-24
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	1e-24
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	3e-24
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	5e-24
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	7e-24
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	2e-23
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	1e-22
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	3e-23
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	8e-23
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	1e-22
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	1e-22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-22
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	2e-21
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-21
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	3e-21
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	4e-21
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	1e-20
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	3e-20
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	5e-20
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	7e-20
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	1e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-19
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	3e-19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-19
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	9e-19
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	1e-18
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	1e-18
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	1e-18
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	3e-18
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	2e-10
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	4e-18
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	5e-18
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	8e-18
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-17
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	2e-17
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	5e-17
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	9e-17
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-16
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-09
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	1e-16
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	1e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-16
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	5e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-14
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-13
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	2e-13
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-13
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-12
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	8e-12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-12
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	1e-11
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	2e-11
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-10
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	8e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-09
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	1e-08
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	6e-08
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	1e-07
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	2e-07
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	8e-04
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-04

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  122 bits (308), Expect = 1e-34
 Identities = 32/65 (49%), Positives = 39/65 (60%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT   
Sbjct: 213 GMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272

Query: 181 SDYKE 185
             Y+ 
Sbjct: 273 GQYQP 277

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  120 bits (304), Expect = 5e-34
 Identities = 26/65 (40%), Positives = 33/65 (50%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            + N +V+  +E G R+P P  CPP LY +M  CW  DP  RP F  L   L D + ME 
Sbjct: 217 WLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276

Query: 181 SDYKE 185
               E
Sbjct: 277 DIAME 281

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  119 bits (301), Expect = 2e-32
 Identities = 34/65 (52%), Positives = 44/65 (67%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM+N EV+  +E GYRMP P  CP  LY+IM+ CW   P +RPTFE +Q  L+DF+T   
Sbjct: 388 GMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447

Query: 181 SDYKE 185
           S Y+E
Sbjct: 448 SQYEE 452

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 99.0 bits (247), Expect = 7e-25
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS--------FCLKMT 52
           W+F  I R +AE++LL P N  G+F+IRDSE+ K  YSLS              + ++  
Sbjct: 72  WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 131

Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
                + + ++  +T+   ELV+HY K  DGLC  L  PC+ 
Sbjct: 132 DNGGFYISPRSTFSTL--QELVDHYKKGNDGLCQKLSVPCMS 171

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  117 bits (295), Expect = 3e-32
 Identities = 27/67 (40%), Positives = 37/67 (55%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            MTN +V+  VE GYR+P P GCP  L+ +ML+CW KD  +RP F  +   L+       
Sbjct: 257 NMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316

Query: 181 SDYKEAS 187
           S    A+
Sbjct: 317 SLRATAT 323

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  115 bits (291), Expect = 4e-32
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            +   +V+ +VE GY+M  P GCPP +Y++M  CW  D   RP+F  L+ +LE   T E 
Sbjct: 217 RIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276

Query: 181 S 181
            
Sbjct: 277 H 277

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  115 bits (291), Expect = 5e-32
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
             M   EV+  +E G RM CPP CPP LY +M +CW+     RP F T++ ++   +   
Sbjct: 215 KKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274

Query: 180 GSDYKE 185
            S  + 
Sbjct: 275 ASKVEG 280

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  114 bits (288), Expect = 1e-31
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
             TN+E    +  G R+  P     ++Y IM  CW +   +RPTF+ L   + D    E
Sbjct: 224 RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  113 bits (286), Expect = 1e-31
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
             TN+EV+ +V  G+R+  P      +Y IM  CW + P KRPTF+ L   +E     +
Sbjct: 208 LYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  118 bits (297), Expect = 2e-31
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
             M   EV+  +E G RM CPP CPP LY +M +CW+     RP F T++ ++   +   
Sbjct: 541 KKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600

Query: 180 GSDYKEAS 187
            S  +  S
Sbjct: 601 ASKVEGGS 608

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  101 bits (254), Expect = 1e-25
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           +++G I R EAE+ L L     G FL+R        Y LS   + +   F ++     + 
Sbjct: 10  FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 69

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCR 98
                         EL E YS+D DGL  NLRKPC + S  
Sbjct: 70  AIAGGKAHCGP--AELCEFYSRDPDGLPCNLRKPCNRPSGL 108

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 80.0 bits (197), Expect = 5e-18
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           WY   + R EAE+KL       G FL+R  +  +  Y+LS     +   + +        
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 221

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS 96
              +     T+   +LVE+    ADGL   L++ C   S
Sbjct: 222 CIPEGTKFDTL--WQLVEYLKLKADGLIYCLKEACPNSS 258

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  113 bits (286), Expect = 2e-31
 Identities = 25/61 (40%), Positives = 38/61 (62%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E 
Sbjct: 220 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279

Query: 181 S 181
           +
Sbjct: 280 A 280

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  113 bits (285), Expect = 3e-31
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM-E 179
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F    
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274

Query: 180 GSDYKE 185
            SD  E
Sbjct: 275 ISDEVE 280

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  113 bits (285), Expect = 3e-31
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
            GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++ 
Sbjct: 222 RGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  116 bits (291), Expect = 4e-31
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 384 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443

Query: 181 SDYKEAS 187
             Y+   
Sbjct: 444 PQYQPGE 450

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 94.8 bits (236), Expect = 2e-23
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 10/102 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS--------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y LS     +        + ++  
Sbjct: 67  WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 126

Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
                + T +    ++   +LV +YSK ADGLC  L   C  
Sbjct: 127 DSGGFYITSRTQFNSL--QQLVAYYSKHADGLCHRLTTVCPT 166

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  116 bits (292), Expect = 7e-31
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 467 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526

Query: 181 SDYKEAS 187
             Y+   
Sbjct: 527 PQYQPGE 533

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 98.8 bits (246), Expect = 2e-24
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS--------FCLKMT 52
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y LS     +        + ++  
Sbjct: 150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 209

Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCV 93
                + T +    ++   +LV +YSK ADGLC  L   C 
Sbjct: 210 DSGGFYITSRTQFNSL--QQLVAYYSKHADGLCHRLTTVCP 248

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  113 bits (285), Expect = 9e-31
 Identities = 19/67 (28%), Positives = 34/67 (50%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            ++N EV+  +  G+R+P P  CP  +Y +M++CW ++  +RP F  +   L+       
Sbjct: 253 ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312

Query: 181 SDYKEAS 187
           S    A 
Sbjct: 313 SLKTLAD 319

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  111 bits (281), Expect = 9e-31
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
             +N+EV+  +  G+R+  P      +Y IM  CW + P  RP F  L  +L +   
Sbjct: 208 NRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  113 bits (285), Expect = 1e-30
 Identities = 26/61 (42%), Positives = 35/61 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            M+N +V+  V+ GYR+P P  CP  LY +ML+CW KD   RP FE +   L+      G
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312

Query: 181 S 181
           S
Sbjct: 313 S 313

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  111 bits (279), Expect = 6e-30
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+  +E+   +E G R+P PP C   +Y IM +CW+ D   RP F  L  +       + 
Sbjct: 222 GIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR-DP 280

Query: 181 SDYKEASG 188
             Y    G
Sbjct: 281 QRYLVIQG 288

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  112 bits (283), Expect = 8e-30
 Identities = 26/61 (42%), Positives = 35/61 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            +   +V+ +VE GY+M  P GCPP +YD+M  CW  D   RPTF  L+ +LE   T E 
Sbjct: 389 RIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448

Query: 181 S 181
            
Sbjct: 449 H 449

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 88.9 bits (221), Expect = 3e-21
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 8/97 (8%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           W+ GKI R +AE+ L  PE   G FL+R+S +   DY+L    E K   + +     + L
Sbjct: 82  WFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASK-L 138

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
              ++     +   +LVEHY+ DADGLC  L KP V 
Sbjct: 139 SIDEEVYFENL--MQLVEHYTTDADGLCTRLIKPKVM 173

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  110 bits (276), Expect = 8e-30
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT-ME 179
            +   ++ H +  G R+P P  CP  LY +M +CW  DP  RPTF  L  ++E   + + 
Sbjct: 231 HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290

Query: 180 GSDYKE 185
           G  Y +
Sbjct: 291 GDHYVQ 296

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  110 bits (276), Expect = 1e-29
 Identities = 19/69 (27%), Positives = 32/69 (46%)

Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
                 + +L  +E G R+P PP CP  ++++M  CW   P  RP+F  L  +L+  ++ 
Sbjct: 245 RDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304

Query: 179 EGSDYKEAS 187
                  A 
Sbjct: 305 SRGCETHAF 313

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score =  104 bits (261), Expect = 2e-29
 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 5/100 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           W+FG IKR +AEK+LL  EN  GAFLIR+SES+K D+SLS         + ++       
Sbjct: 18  WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 77

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC 97
           F T++   +T+   E V +Y+  +DGLCV L KPC+++  
Sbjct: 78  FLTRRKVFSTL--NEFVNYYTTTSDGLCVKLEKPCLKIQV 115

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score =  103 bits (258), Expect = 4e-29
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
           W+ G+I R E+ + +       G FL+RDS+S    + L+            L       
Sbjct: 7   WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66

Query: 57  LFETQKAGRTTIHY-PELVEHYSKDADGLCVNLRKPCVQ 94
            F +   G T      +LV+ Y  +   L   L+  C++
Sbjct: 67  TFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLKHHCIR 105

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score =  103 bits (259), Expect = 4e-29
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
           W+  KI R EA++ ++      G FL+RDS+S    + LS            + +     
Sbjct: 28  WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGE 87

Query: 57  LFETQKAGRTTIHY-PELVEHYSKDADGLCVNLRKPCVQ 94
           +F T   G T      +LVE Y  +   L   L+  C +
Sbjct: 88  MFHTLDDGHTRFTDLIQLVEFYQLNKGVLPCKLKHYCAR 126

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score =  103 bits (258), Expect = 5e-29
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 23/110 (20%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--------------EYKRSS 46
           W+ G+I R E+++ +       G FL+R+S+     + LS                +   
Sbjct: 16  WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 75

Query: 47  FCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS 96
               M  G++ F             +LVE +  +   L   LR  C +V+
Sbjct: 76  LYFSMDDGQTRFTD---------LLQLVEFHQLNRGILPCLLRHCCTRVA 116

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  108 bits (273), Expect = 1e-28
 Identities = 19/59 (32%), Positives = 33/59 (55%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
            ++N +    VE G R+PCP  CP  ++ +M +CW  +P +RP+F T+  +L+      
Sbjct: 318 NLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 79.2 bits (196), Expect = 5e-18
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 8/95 (8%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC-LKMTTGRSLFE 59
           WY G I R E  + L+      G FL+R+S+  K +Y LS           + +  +L+ 
Sbjct: 15  WYHGAIPRAEVAELLV----HSGDFLVRESQG-KQEYVLSVLWDGLPRHFIIQSLDNLYR 69

Query: 60  TQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
            +  G  +I  P L++H       L         +
Sbjct: 70  LEGEGFPSI--PLLIDHLLSTQQPLTKKSGVVLHR 102

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  106 bits (268), Expect = 1e-28
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT-M 178
           G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++     M
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293

Query: 179 EG 180
            G
Sbjct: 294 AG 295

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score =  101 bits (254), Expect = 2e-28
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 23/109 (21%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMT-------- 52
           W+F  I R +AE++LL P N  G+FLIR+SES K  +SLS    ++    +         
Sbjct: 14  WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 53  ------TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
                 + R  F T            LV+HYSK  DGLC  L  PCV +
Sbjct: 74  NGGYYISPRITFPT---------LQALVQHYSKKGDGLCQKLTLPCVNL 113

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  106 bits (266), Expect = 2e-28
 Identities = 18/56 (32%), Positives = 33/56 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G +N +V+  + +   +PCP  CP  +Y +M+ECW + P +RP F+ +  +L  + 
Sbjct: 233 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 288

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  106 bits (267), Expect = 2e-28
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           G MT   +++ ++ G R+PCPP CP  +Y +M +CW   P  R +F+ L    E   
Sbjct: 245 GQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  105 bits (265), Expect = 3e-28
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 121 GMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+  L +    +
Sbjct: 227 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  109 bits (273), Expect = 3e-28
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 595 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score =  100 bits (251), Expect = 3e-28
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 24/107 (22%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKM--------- 51
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS         ++         
Sbjct: 6   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65

Query: 52  ------TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                  + R  F             ELV HY+  +DGLC  L +PC
Sbjct: 66  DNGGFYISPRITFPG---------LHELVRHYTNASDGLCTRLSRPC 103

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  106 bits (266), Expect = 3e-28
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT-M 178
           G M    ++  +++  R+P P GCP  +Y IM ECW  +  +RP+F  L  +++     M
Sbjct: 265 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324

Query: 179 EG 180
            G
Sbjct: 325 AG 326

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score =  100 bits (251), Expect = 4e-28
 Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 25/107 (23%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-------------EYKRSSF 47
          W+FG I R EA ++L    N  GAFLIR SE    DY LS                    
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRL 63

Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           L        F +          PELV ++   +    + L  PC +
Sbjct: 64 HL---NEAVSFLS---------LPELVNYHRAQSLSHGLRLAAPCRK 98

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  106 bits (266), Expect = 4e-28
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM-E 179
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+  
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321

Query: 180 GSDYKEAS 187
             +Y + S
Sbjct: 322 NEEYLDLS 329

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  106 bits (266), Expect = 4e-28
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+  AEV   +E G R+  P  C   +Y +M++CW+ D   RPTF+ L  +       + 
Sbjct: 220 GLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR-DP 278

Query: 181 SDYKEASG 188
             Y     
Sbjct: 279 PRYLVIKR 286

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  105 bits (263), Expect = 6e-28
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
            + +   L   E  +++P P      L +++  C   +P  RP+F  +   L   FT +
Sbjct: 221 ALDSQRKLQFYEDRHQLPAPKAAE--LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  105 bits (264), Expect = 7e-28
 Identities = 21/58 (36%), Positives = 28/58 (48%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G MT   +   +E G R+P P  CP  +Y +M  CW  +   RPTFE L   L+    
Sbjct: 253 GQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  106 bits (266), Expect = 8e-28
 Identities = 20/62 (32%), Positives = 33/62 (53%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+   T+  
Sbjct: 308 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367

Query: 181 SD 182
           ++
Sbjct: 368 NE 369

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  105 bits (263), Expect = 8e-28
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF-TME 179
            +   ++   +  G R+  P  CP  LY++ML+CW      RP+F  L  ++   F T  
Sbjct: 235 DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294

Query: 180 GSDY 183
           G  Y
Sbjct: 295 GEHY 298

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  104 bits (261), Expect = 1e-27
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
            ++N EV+  +  G  +  P  CP  +YD+ML CW ++P +R   + +   L      
Sbjct: 238 QLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  104 bits (262), Expect = 1e-27
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP F  L  +         
Sbjct: 222 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP- 280

Query: 181 SDYKEASG 188
             Y    G
Sbjct: 281 QRYLVIQG 288

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  106 bits (267), Expect = 2e-27
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM-E 179
           G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F    
Sbjct: 422 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481

Query: 180 GSDYKE 185
            SD  E
Sbjct: 482 ISDEVE 487

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           WY G + R  AE   LL    +G+FL+R+SES     S+S         + +   +   L
Sbjct: 107 WYHGPVSRNAAEY--LLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 164

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           + + ++   T+   ELV H+S  ADGL   L  P  +
Sbjct: 165 YVSSESRFNTL--AELVHHHSTVADGLITTLHYPAPK 199

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  104 bits (261), Expect = 2e-27
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +   L      E 
Sbjct: 244 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE-ER 302

Query: 181 SDYKEASGY 189
             Y   + Y
Sbjct: 303 KTYVNTTLY 311

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 98.1 bits (245), Expect = 3e-27
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGR- 55
           +Y G + + E E  LLL     G FLIRDSES      L    +         +   G  
Sbjct: 5   YYHGCLTKRECEA-LLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYY 63

Query: 56  SLFETQKAGRTTIH-YPELVEHYSKDADGLCVNLRKPCVQ 94
            +       RT      ELV  Y K   GL V+L  P ++
Sbjct: 64  RIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLSNPIMR 103

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  103 bits (259), Expect = 4e-27
 Identities = 22/67 (32%), Positives = 35/67 (52%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+ NAE+ + +  G R+  PP C   +YD+M +CW  DP +RP+F  L+ +LE+      
Sbjct: 242 GIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301

Query: 181 SDYKEAS 187
                  
Sbjct: 302 VLSTSQD 308

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  104 bits (261), Expect = 4e-27
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +  
Sbjct: 296 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL-- 353

Query: 181 SDYKEASGY 189
           +  +E   Y
Sbjct: 354 TSNQEMGYY 362

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  102 bits (257), Expect = 7e-27
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G+ N E+   + HG+R+  P  C   LY+IM  CW  DP+ RPTF  L+ +LE    
Sbjct: 252 GVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  103 bits (258), Expect = 9e-27
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF-TME 179
            +   ++   +  G R+  P  CP  LY++ML+CW      RP+F  L  ++   F T  
Sbjct: 299 DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358

Query: 180 GSDYKEAS 187
           G  Y   +
Sbjct: 359 GEHYVHVN 366

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  101 bits (255), Expect = 1e-26
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
           G+    + + ++ G+RM  P  C   +Y +ML+CW ++P KRP F  +   LE    
Sbjct: 255 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 96.6 bits (241), Expect = 1e-26
 Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 36/113 (31%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS                    
Sbjct: 7   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLS---------------IRDWD 51

Query: 61  QKAGRTTIHY---------------------PELVEHYSKDADGLCVNLRKPC 92
              G    HY                      +LV+HYS+ A GL   L  P 
Sbjct: 52  DMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVPS 104

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  102 bits (256), Expect = 1e-26
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            ++N E +  +  G  +  P  CPP +Y IM  CW ++P +R + + +  +L+       
Sbjct: 263 QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP- 321

Query: 181 SDYKEASG 188
             Y +  G
Sbjct: 322 PVYLDVLG 329

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 96.5 bits (241), Expect = 1e-26
 Identities = 37/106 (34%), Positives = 47/106 (44%), Gaps = 26/106 (24%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
           W+ GKI R +AE+ L  PE   G FL+R+S +   DY+L              Y  S   
Sbjct: 10  WFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLS 67

Query: 49  LKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           +        FE            +LVEHY+ DADGLC  L KP V 
Sbjct: 68  I---DEEVYFEN---------LMQLVEHYTSDADGLCTRLIKPKVM 101

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  101 bits (254), Expect = 2e-26
 Identities = 21/57 (36%), Positives = 27/57 (47%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
             +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E    
Sbjct: 248 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  101 bits (254), Expect = 3e-26
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G + N++    V+ GY+M  P   P  +Y IM  CW  +P  RPTF+ +   L++    +
Sbjct: 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328

Query: 180 GSDY 183
             + 
Sbjct: 329 RRER 332

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 95.1 bits (237), Expect = 5e-26
 Identities = 27/109 (24%), Positives = 37/109 (33%), Gaps = 25/109 (22%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------------EYKRS 45
            Y GKI R   EK LLL     G++L+RDSES    Y L                E    
Sbjct: 6   VYHGKISRETGEK-LLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSW 64

Query: 46  SFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           S        +  F              L+  + K   G+ + L+ P  +
Sbjct: 65  SAETAPGVHKRYFRK---------IKNLISAFQKPDQGIVIPLQYPVEK 104

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  100 bits (251), Expect = 5e-26
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 121 GM-TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           GM  +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E   + E
Sbjct: 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS-E 308

Query: 180 GSDY 183
            +++
Sbjct: 309 STNH 312

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 95.0 bits (237), Expect = 8e-26
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           W  G I R +AE+ LL      G+FL+R SES    Y+L         ++ +        
Sbjct: 12  WNHGNITRSKAEE-LLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKF 70

Query: 58  FETQKAGRTTIHYP---ELVEHYSKDADGLCVNLRKPCVQ 94
                 G +   +    +L+E Y K+  GL  +L+ P   
Sbjct: 71  TVQASEGVSMRFFTKLDQLIEFYKKENMGLVTHLQYPVPL 110

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  100 bits (250), Expect = 8e-26
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 121 GMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+  + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L   L +     
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 95.2 bits (237), Expect = 8e-26
 Identities = 27/109 (24%), Positives = 37/109 (33%), Gaps = 25/109 (22%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---------------EYKRS 45
            Y GKI R   EK LLL     G++L+RDSES    Y L                E    
Sbjct: 6   VYHGKISRETGEK-LLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSW 64

Query: 46  SFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           S        +  F              L+  + K   G+ + L+ P  +
Sbjct: 65  SAETAPGVHKRYFRK---------IKNLISAFQKPDQGIVIPLQYPVEK 104

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 99.7 bits (249), Expect = 1e-25
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F  +   +++      
Sbjct: 243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME--- 299

Query: 181 SDYKEASGY 189
             ++E S Y
Sbjct: 300 PGFREVSFY 308

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 94.3 bits (235), Expect = 1e-25
 Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 27/110 (24%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-------------EYKRSSF 47
           WY G + R  AE  L    N  G+FL+R+SES     S+S                    
Sbjct: 18  WYHGPVSRSAAEYLLSSLIN--GSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKV 75

Query: 48  CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC 97
            +   T  S F T           ELV H+S  ADGL   L  P  + + 
Sbjct: 76  YV---TAESRFST---------LAELVHHHSTVADGLVTTLHYPAPKCNK 113

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  100 bits (250), Expect = 1e-25
 Identities = 21/57 (36%), Positives = 27/57 (47%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
             +N EVL  V  G RM  P  CP  +Y IM +CW   P  RP F  +  ++E    
Sbjct: 289 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 99.3 bits (248), Expect = 2e-25
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM + EV++ V  G  + CP  CP  LY++M  CW K P  RP+F ++   L+   
Sbjct: 279 GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 93.0 bits (232), Expect = 2e-25
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 26/104 (25%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
          W+ GKI   EA ++L  PE   G FL+R+S     DY L              ++     
Sbjct: 7  WFHGKISGQEAVQQLQPPE--DGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLT 64

Query: 49 LKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
          +        F             ++VEHYSKD   +C  L +P 
Sbjct: 65 I---DEAVFFCN---------LMDMVEHYSKDKGAICTKLVRPK 96

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 92.3 bits (230), Expect = 6e-25
 Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 27/107 (25%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-------------EYKRSSF 47
          WY G + R  AE   LL    +G+FL+R+SES     S+S                    
Sbjct: 7  WYHGPVSRNAAEY--LLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 64

Query: 48 CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           +   +  S F T           ELV H+S  ADGL   L  P  +
Sbjct: 65 YV---SSESRFNT---------LAELVHHHSTVADGLITTLHYPAPK 99

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 97.8 bits (244), Expect = 7e-25
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 121 GM-TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+  +A     +++G++M  P      +Y IM  CW  D  KRP+F  L   L      +
Sbjct: 277 GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA-D 335

Query: 180 GSDY 183
             + 
Sbjct: 336 AEEA 339

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 92.7 bits (231), Expect = 8e-25
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 27/110 (24%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMT-------- 52
           WY   I R +AE  LL  E+  GAF++RDS      Y++S +  +    +          
Sbjct: 18  WYHRNITRNQAEH-LLRQESKEGAFIVRDSRH-LGSYTISVFMGARRSTEAAIKHYQIKK 75

Query: 53  --------TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
                     R  F++          PEL+ ++  +A GL   LR P   
Sbjct: 76  NDSGQWYVAERHAFQS---------IPELIWYHQHNAAGLMTRLRYPVGL 116

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 92.3 bits (230), Expect = 9e-25
 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
           W+ GKI + EA   LL+      +FL+R S++   DYSL      +            + 
Sbjct: 18  WFHGKISKQEAYN-LLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQF 76

Query: 57  LFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           +   +     +I   ++++HY K+       L++P   
Sbjct: 77  MMGGRYY--NSI--GDIIDHYRKEQIVEGYYLKEPVPM 110

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 91.9 bits (229), Expect = 1e-24
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 27/108 (25%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMT-------- 52
           W+ G I R ++E+ LL  +   GAF++R+S      Y++S + ++    K T        
Sbjct: 13  WFAGNISRSQSEQ-LLRQKGKEGAFMVRNSSQ-VGMYTVSLFSKAVNDKKGTVKHYHVHT 70

Query: 53  --------TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                        F++          P+L+ ++  ++ G+   LR P 
Sbjct: 71  NAENKLYLAENYCFDS---------IPKLIHYHQHNSAGMITRLRHPV 109

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 91.6 bits (228), Expect = 1e-24
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 19/107 (17%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--------EYK-RSSFCLKM 51
           W+FGKI R +AE+ +L  +   GAFLIR+SES   D+SLS         +K       K 
Sbjct: 8   WFFGKIPRAKAEE-MLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKY 66

Query: 52  TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCR 98
                 F +           ELV+++   +      +    ++   +
Sbjct: 67  FLWVVKFNS---------LNELVDYHRSTSVSRNQQIFLRDIEQVPQ 104

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 90.9 bits (226), Expect = 3e-24
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 29/112 (25%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMT-------- 52
           WY   I R +AEK LLL     GAF++RDS +    Y++S + ++               
Sbjct: 11  WYNKSISRDKAEK-LLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKE 68

Query: 53  ----------TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
                       + +F++          P L++++  +  GL   LR P   
Sbjct: 69  TNDSPKRYYVAEKYVFDS---------IPLLIQYHQYNGGGLVTRLRYPVCG 111

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 90.4 bits (225), Expect = 5e-24
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 6/96 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF--CLKMTTGRSLF 58
           WY+ ++ R EAE  +L+     GAFLIR  E   + Y+++   R     C     GR   
Sbjct: 21  WYYDRLSRGEAED-MLMRIPRDGAFLIRKREG-TDSYAITFRARGKVKHCRINRDGRHFV 78

Query: 59  ETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
               A   ++   ELV +Y K A    + LR P   
Sbjct: 79  LGTSAYFESL--VELVSYYEKHALYRKMRLRYPVTP 112

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 90.1 bits (224), Expect = 7e-24
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 27/110 (24%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMT-------- 52
           WY   + R +AE+ LL  E   G F++RDS S+   Y++S + +S+   +          
Sbjct: 13  WYSKHMTRSQAEQ-LLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCS 70

Query: 53  --------TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
                     + LF T          PEL+ ++  ++ GL   L+ P  Q
Sbjct: 71  TPQSQYYLAEKHLFST---------IPELINYHQHNSAGLISRLKYPVSQ 111

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 92.3 bits (229), Expect = 2e-23
 Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 7/171 (4%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           ++FG I R EAE  L+      G +L+R S +    ++LS         + ++     + 
Sbjct: 7   FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 66

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDF 117
                    +    +L  ++S+++DGL   L+KP  +                 +     
Sbjct: 67  AIAGGRTHASP--ADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYV 124

Query: 118 GSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
                   +     +                      W    + R   E +
Sbjct: 125 KQTWNLQGQ--ALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQI 173

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 90.4 bits (224), Expect = 1e-22
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           W+ GKI R E+E+ +L+    +G FLIR  ++    Y+L          + +       L
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKL 218

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
              +     T+   +LVEHYS  ADGL   L  PC ++
Sbjct: 219 SIPEGKKFDTL--WQLVEHYSYKADGLLRVLTVPCQKI 254

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 88.1 bits (219), Expect = 3e-23
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 11/102 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF--CLKMTTGRSLF 58
           W+   I  +EAE  LLL     G+FL R S+S   D++LS  +  +        TG    
Sbjct: 9   WFHPNITGVEAEN-LLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYD 67

Query: 59  ETQKAGRTTIHYPELVEHYS------KDADGLCVNLRKPCVQ 94
                   T+   ELV++Y       K+ +G  + L+ P   
Sbjct: 68  LYGGEKFATL--AELVQYYMEHHGQLKEKNGDVIELKYPLNC 107

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 90.7 bits (225), Expect = 8e-23
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           WY   + R EAE+KL       G FL+R  +  +  Y+LS     +   + +        
Sbjct: 161 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 219

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
              +     T+   +LVE+    ADGL   L++ C
Sbjct: 220 CIPEGTKFDTL--WQLVEYLKLKADGLIYCLKEAC 252

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 90.3 bits (224), Expect = 1e-22
 Identities = 37/171 (21%), Positives = 51/171 (29%), Gaps = 7/171 (4%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC---LKMTTGRSL 57
           +++G I R EAE+ L L     G FL+R        Y LS      F    ++     + 
Sbjct: 8   FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 67

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVHGTNLSGVVVSAVDF 117
                         EL E YS+D DGL  NLRKPC + S         +     +  V  
Sbjct: 68  AIAGGKAHCGP--AELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAM--VRD 123

Query: 118 GSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
                   E     +                      W    + R   E  
Sbjct: 124 YVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERK 174

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 86.6 bits (215), Expect = 1e-22
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
           WY G + R EA+    L    HG FL+RDS +   DY LS  E  R S  +  +     F
Sbjct: 21  WYMGPVSRQEAQT--RLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRF 78

Query: 59  ETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           +        +  P L+E Y          L +P  +
Sbjct: 79  KIGDQEFDHL--PALLEFYKIHYLDTTT-LIEPAPR 111

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 88.9 bits (221), Expect = 9e-22
 Identities = 18/57 (31%), Positives = 23/57 (40%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
                +    V       CPP CPP  + I + C   DP KRP+F  L+  LE    
Sbjct: 226 LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 83.9 bits (208), Expect = 2e-21
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
           W+ G I R +AE   LL     G+FLIR S S    Y+LS   +SS C      +  G  
Sbjct: 18  WFHGAISREDAEN--LLESQPLGSFLIRVSHSHV-GYTLSYKAQSSCCHFMVKLLDDGTF 74

Query: 57  LFETQKAGRTTIHYPELVEHYSK-DADGLCVNLRKPCVQ 94
           +   +K   T++    LV  + +   +     L +PC Q
Sbjct: 75  MIPGEKVAHTSL--DALVTFHQQKPIEPRRELLTQPCRQ 111

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 88.4 bits (219), Expect = 2e-21
 Identities = 18/55 (32%), Positives = 27/55 (49%)

Query: 123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
            + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L   L +   
Sbjct: 301 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 83.5 bits (207), Expect = 3e-21
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 31/111 (27%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
           W+ G ++R + +  L    +  G +LIR+  +    +++S              K +   
Sbjct: 18  WFAGNMERQQTDNLLKSHAS--GTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIH 75

Query: 49  LKMTTGRSLFETQKAGRTTIHYPELVEHYSK-----DADGLCVNLRKPCVQ 94
           +   T    F++           ELVE+Y           L   L+ P   
Sbjct: 76  I---TEAKKFDS---------LLELVEYYQCHSLKESFKQLDTTLKYPYSG 114

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 82.2 bits (204), Expect = 4e-21
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 19/97 (19%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--------EYK-RSSFCLKM 51
          W+FGKI R +AE+ +L  +   GAFLIR+SES   D+SLS         +K       K 
Sbjct: 5  WFFGKIPRAKAEE-MLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKY 63

Query: 52 TTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNL 88
                F +           ELV+++   +      +
Sbjct: 64 FLWVVKFNS---------LNELVDYHRSTSVSRNQQI 91

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 81.6 bits (202), Expect = 1e-20
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC-LKMTTGRSLFE 59
           WY G I RIEA++ L       G FL+R+S  +  +Y LS Y         +    +++ 
Sbjct: 19  WYHGAIPRIEAQELL----KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYR 74

Query: 60  TQKAGRTTIHYPELVEHYSKDADGLC----VNLRKPCVQ 94
            +  G + I  P+L++H+      +     V L  P  +
Sbjct: 75  FEGTGFSNI--PQLIDHHYTTKQVITKKSGVVLLNPIPK 111

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 81.3 bits (201), Expect = 3e-20
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 31/111 (27%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
           WY G ++R  AE   +L     G FL+R       ++++S                  + 
Sbjct: 28  WYAGPMERAGAES--ILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYR 85

Query: 49  LKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPCVQ 94
           +   T +  F             ELVE Y +++       L   L+ P  +
Sbjct: 86  I---TEKKAFRG---------LTELVEFYQQNSLKDCFKSLDTTLQFPFKE 124

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 79.6 bits (197), Expect = 5e-20
 Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 23/104 (22%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--------EYKRSSFCLKMT 52
           WY+G + R +AE   L      G FLIRDSES  +D+S+S         +K         
Sbjct: 7   WYYGNVTRHQAEC-ALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYC 65

Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSK-----DADGLCVNLRKP 91
            G+  F T           ELVEHY K        G  + L + 
Sbjct: 66  IGQRRFHT---------MDELVEHYKKAPIFTSEHGEKLYLVRA 100

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 79.9 bits (197), Expect = 7e-20
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 20/110 (18%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRSLFE 59
           WY   + R +A    LL + D GAFLIRDS S +  Y L+ +        +   G  + +
Sbjct: 22  WYKPHLSRDQAIA--LLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQ 79

Query: 60  TQK-------------AGRTTIHY----PELVEHYSKDADGLCVNLRKPC 92
             +              G  +  Y      LV  +S     L   LR P 
Sbjct: 80  LVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQHSISPISLPCCLRIPS 129

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 79.3 bits (196), Expect = 1e-19
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 32/112 (28%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKN-DYSLS------------EYKRSSF 47
           WY+G I R E  +KL    +  G FL+RD+ ++ + DY+L+             ++   +
Sbjct: 13  WYWGDISREEVNEKLRDTAD--GTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKY 70

Query: 48  CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPCVQ 94
                +    F +           EL+ HY  ++       L V L  P  +
Sbjct: 71  GF---SDPLTFSS---------VVELINHYRNESLAQYNPKLDVKLLYPVSK 110

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 77.7 bits (192), Expect = 3e-19
 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC-LKMTTGRSLFE 59
           W+ GK+ R EAE  L      +G FL+R+S +    Y L+  +      L +     +  
Sbjct: 9   WFHGKLSRREAEALL----QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVR 64

Query: 60  TQKAGRTTIHYPELVEHYSKD-----ADGLCVNLRKPC 92
           T+     ++    L+ ++  +     + G  + L++P 
Sbjct: 65  TKDHRFESV--SHLISYHMDNHLPIISAGSELCLQQPV 100

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 81.2 bits (201), Expect = 4e-19
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 121 GMTNAE-VLHQVEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            + N + ++  V  G   P        CP R+  +M EC  K   +RP+F  +  ++E+ 
Sbjct: 227 NINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 76.4 bits (188), Expect = 9e-19
 Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 20/111 (18%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           WY+G++ R EA    LL    HG FL+RDS +   DY LS     + S + +  +  R  
Sbjct: 2   WYWGRLSRQEAVA--LLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPP 59

Query: 58  FETQKAGRTTIHY--------------PELVEHYSKDADGLCVNLRKPCVQ 94
                A                     P L+E Y          L +P  +
Sbjct: 60  VPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHY-LDTTTLIEPVSR 109

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 76.2 bits (188), Expect = 1e-18
 Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 13/102 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           W  G   R +AE   LL     G FL+R+S S++  Y+ S           +  T     
Sbjct: 12  WNVGSSNRNKAEN--LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYG 68

Query: 58  FETQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPCVQ 94
           F       +++   ELV HY   +     D L V L  P   
Sbjct: 69  FAEPYNLYSSL--KELVLHYQHTSLVQHNDSLNVTLAYPVYA 108

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 76.8 bits (189), Expect = 1e-18
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 25/117 (21%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
           WY+G I R EAE KL    +  G+FL+RDS   +   SLS            E+    F 
Sbjct: 26  WYWGPITRWEAEGKLANVPD--GSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFS 83

Query: 49  LKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS--CRIYLVH 103
                      +           +L+EH   D++       +  +  S    + L +
Sbjct: 84  FYEQPDVEGHTS---------IVDLIEHSIGDSENGAFCYSRSRLPGSATYPVRLTN 131

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 76.4 bits (188), Expect = 1e-18
 Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 9/98 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS------FCLKMTTG 54
             F  + R EA + +L      G  ++R   S   +YS++  +         + +     
Sbjct: 17  ACFYTVSRKEATE-MLQKNPSLGNMILRPG-SDSRNYSITIRQEIDIPRIKHYKVMSVGQ 74

Query: 55  RSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
               E +K   T  +   +++++ K+  G         
Sbjct: 75  NYTIELEK-PVTLPNLFSVIDYFVKETRGNLRPFIAST 111

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 78.0 bits (192), Expect = 3e-18
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 19/102 (18%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF--------CLKMT 52
           WY   + R +AE  +L+     GAFL+R   +  N Y++S                  + 
Sbjct: 124 WYHASLTRAQAEH-MLMRVPRDGAFLVRKR-NEPNSYAISFRAEGKIKHCRVQQEGQTVM 181

Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
            G S F++           +L+ +Y K      + LR P  +
Sbjct: 182 LGNSEFDS---------LVDLISYYEKHPLYRKMKLRYPINE 214

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 9/49 (18%)

Query: 1  WYFGKI-----KRIEAEKKL----LLPENDHGAFLIRDSESRKNDYSLS 40
          W+ GK+      R  AE+ L    +      G+FL+R+SE+   DY+LS
Sbjct: 6  WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLS 54

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 76.6 bits (188), Expect = 4e-18
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 10/100 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS--------FCLKMT 52
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS              + ++  
Sbjct: 76  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135

Query: 53  TGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                + + +     +   ELV HY+  +DGLC  L +PC
Sbjct: 136 DNGGFYISPRITFPGL--HELVRHYTNASDGLCTRLSRPC 173

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 74.7 bits (184), Expect = 5e-18
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 11/101 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLSEYKRSSF--CLKMTTGRSL 57
           W+ G + R++A + +L      HG FL+R SE+R+ +  L+   +               
Sbjct: 11  WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQ 70

Query: 58  FETQKAGRTTIHYPELVEHYSK------DADGLCVNLRKPC 92
              Q     +I   +++EH+              V L    
Sbjct: 71  CRVQHLHFQSI--FDMLEHFRVHPIPLESGGSSDVVLVSYV 109

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 74.9 bits (184), Expect = 8e-18
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 30/115 (26%)

Query: 1   WYFGKIKRIEAEKKLLL-----PENDHGAFLIRDSESRKNDYSLS------------EYK 43
           W+  K++   + +KLL           G FL+R+SE+  NDY+LS               
Sbjct: 24  WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRST 83

Query: 44  RSSFCLKMT-TGRSLFETQKAGRTTIHYPELVEHYSK---DADGLCVNLRKPCVQ 94
             +  +K   T    F +            L++HY +         + L  P   
Sbjct: 84  MENGVMKYYLTDNLTFNS---------IYALIQHYREAHLRCAEFELRLTDPVPN 129

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 1e-17
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 121 GMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G+    V + V  +   +P P  CP     +M +CW  DP  RP+F  +  +L  
Sbjct: 216 GIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 77.0 bits (189), Expect = 2e-17
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 13/102 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           WY GKI R +AE+  +L     G FLIR+S S++  Y+ S           +  T     
Sbjct: 196 WYVGKINRTQAEE--MLSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATGFG 252

Query: 58  FETQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPCVQ 94
           F        ++   ELV HY   +     D L V L  P   
Sbjct: 253 FAEPYNLYGSL--KELVLHYQHASLVQHNDALTVTLAHPVRA 292

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 71.8 bits (177), Expect = 5e-17
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
          W+   + R +AE   LL   D G F+IR S+S   D+S+S            ++ T G  
Sbjct: 11 WFHEGLSRHQAEN--LLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNY 68

Query: 57 LFETQKAGRTTIHYPELVEHYSKDA 81
             T+K    ++   +LV++Y   +
Sbjct: 69 FLWTEKF--PSL--NKLVDYYRTTS 89

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 72.2 bits (177), Expect = 9e-17
 Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 9/103 (8%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKND--YSLSEYKRSS---FCLKMTTGR 55
           WY G   R  AE+  L   N  G+FLIR S    +   Y+L  +         ++     
Sbjct: 25  WYAGACDRKSAEE-ALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEAT 83

Query: 56  SLFETQKAGRTTIHY---PELVEHYSKDADGLCVNLRKPCVQV 95
             +   K      ++    E+V  +  +   L  +        
Sbjct: 84  KQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDST 126

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 75.6 bits (185), Expect = 1e-16
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 32/112 (28%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESR-KNDYSLS------------EYKRSSF 47
           WY+G I R E  +KL    +  G FL+RD+ ++   DY+L+             ++   +
Sbjct: 12  WYWGDISREEVNEKLRDTAD--GTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKY 69

Query: 48  CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPCVQ 94
                +    F +           EL+ HY  ++       L V L  P  +
Sbjct: 70  GF---SDPLTFSS---------VVELINHYRNESLAQYNPKLDVKLLYPVSK 109

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
           W  G   R +AE   LL     G FL+R+S S++  Y+ S
Sbjct: 303 WNVGSSNRNKAEN--LLRGKRDGTFLVRES-SKQGCYACS 339

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 72.3 bits (177), Expect = 1e-16
 Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 19/104 (18%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
           +Y+  +   EA   L       G FLIRDS  +++ ++LS            + +  SF 
Sbjct: 25  FYWSAVTGGEANLLLSAEPA--GTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFS 82

Query: 49  LKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
           L                  +   +LV HY         +L    
Sbjct: 83  L---QSDPRSTQPVPRFDCV--LKLVHHYMPPPGTPSFSLPPTE 121

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 72.2 bits (177), Expect = 1e-16
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 20/115 (17%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS------------EYKRSSFC 48
           WY+G +   EA++KL   E   G FLIRDS       ++S            EY+   F 
Sbjct: 19  WYWGSMTVNEAKEKLK--EAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFR 76

Query: 49  LKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCRIYLVH 103
           L         +++     ++    L+++Y +           P    +  +YL  
Sbjct: 77  L---DSIICVKSKLKQFDSV--VHLIDYYVQMCKDKRTGPEAPR-NGTVHLYLTK 125

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 121 GMTNAEVLHQVEHGYRMPCPP-GCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
                 ++ Q+  G +      G    + DI+L CW  +  +RPTF  L   LE  
Sbjct: 245 TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 71.4 bits (175), Expect = 5e-16
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC---LKMTTGRSL 57
            Y+G + +  AE  L       G FL+RDS      +S+S  + S      ++       
Sbjct: 36  CYWGVMDKYAAEALLEGKPE--GTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFS 93

Query: 58  FETQKAGRTTIH-YPELVEHYSKDADGLC--VNLRKPCV-------QVSCRIYLVHGTNL 107
           F+              L+EHY   +  +     L  P +       Q  CR  + + T  
Sbjct: 94  FDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTY 153

Query: 108 SGV 110
            G+
Sbjct: 154 DGI 156

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 121 GMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            ++N E+  +V   G R   PPG  P +  +M  C  +DP KRP F+ +   LE  
Sbjct: 213 DLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 62.8 bits (153), Expect = 2e-13
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 12/97 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC-LKMTTGRSLFE 59
           WY G I R E  + L+      G FL+R+S+  K +Y LS           + +  +L+ 
Sbjct: 18  WYHGAIPRAEVAELLV----HSGDFLVRESQG-KQEYVLSVLWDGLPRHFIIQSLDNLYR 72

Query: 60  TQKAGRTTIHYPELVEHYSKDADGLC----VNLRKPC 92
            +  G  +I  P L++H       L     V L +  
Sbjct: 73  LEGEGFPSI--PLLIDHLLSTQQPLTKKSGVVLHRAV 107

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 66.2 bits (160), Expect = 2e-13
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
           WY G + R EA+    L    HG FL+RDS +   DY LS  E  R S  +  +     F
Sbjct: 14  WYMGPVSRQEAQT--RLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRF 71

Query: 59  ETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           +        +  P L+E Y          +      
Sbjct: 72  KIGDQEFDHL--PALLEFYKIHYLDTTTLIEPAPRY 105

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 121 GMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
            +  A+V+  V     R+  P    P++  I+  CW  +P KRP+F T+   L     
Sbjct: 241 NLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 62.8 bits (152), Expect = 1e-12
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLK--MTTGRSLF 58
           W+FGKI R +AE+ +L  +   GAFLIR+SES   D+SLS    +       +  G   +
Sbjct: 60  WFFGKIPRAKAEE-MLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKY 118

Query: 59  ETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSCR 98
                   ++   ELV+++   +      +    ++   +
Sbjct: 119 FLWVVKFNSL--NELVDYHRSTSVSRNQQIFLRDIEQVPQ 156

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 59.2 bits (143), Expect = 8e-12
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
           +Y+  +   EA   L       G FLIRDS  +++ ++LS   +    +  ++   G   
Sbjct: 36  FYWSAVTGGEANLLLS--AEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFS 93

Query: 58  FETQKAGRTTIH----YPELVEHYSK 79
            ++       +       +LV HY  
Sbjct: 94  LQSDPRSTQPVPRFDXVLKLVHHYMP 119

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 61.2 bits (149), Expect = 9e-12
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 121 GMTNAEVLHQ---VEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
             +  ++       E G R   P  CPPRL +++  CW  DP KRP F  +  +L + 
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 61.0 bits (147), Expect = 1e-11
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          +YF  + R EA K L  P+   G FL+RDS SR  +YSL+
Sbjct: 43 FYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLT 81

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 58.6 bits (141), Expect = 2e-11
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEY 42
          +YF  + R EA K L  P+   G FL+RDS SR  +YSL+  
Sbjct: 14 FYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVR 54

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 56.8 bits (136), Expect = 2e-10
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          WY+G++ R EA    LL    HG FL+RDS +   DY LS
Sbjct: 15 WYWGRLSRQEAVA--LLQGQRHGVFLVRDSSTSPGDYVLS 52

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 53.2 bits (127), Expect = 8e-10
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 7/92 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLK----MTTG 54
             F K+ R+EA+  LL    + G  L+R S    +  S++  +    +  ++       G
Sbjct: 23  SCFLKVSRLEAQL-LLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREG 81

Query: 55  RSLFETQKAGRTTIHYPELVEHYSKDADGLCV 86
                  +   +      +V ++        V
Sbjct: 82  PKYVIDVEQPFSCTSLDAVVNYFVSHTKKALV 113

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 131 VEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           V +G R P     P  +  +M  CW KDP +RP+ E +   +   
Sbjct: 217 VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 52.7 bits (125), Expect = 1e-08
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
          WY+G++ R EA    LL    HG FL+RDS +   DY LS
Sbjct: 13 WYWGRLSRQEAVA--LLQGQRHGVFLVRDSSTSPGDYVLS 50

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} Length = 595

 Score = 50.7 bits (121), Expect = 6e-08
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+   +  ++AE  LL     HG+FL R S   + D+SLS                 F  
Sbjct: 4  WFHRDLSGLDAET-LLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 62

Query: 61 QKAGRTTIHYPELVEHY------SKDADGLCVNLRKP 91
             G       ELVE+Y       +D DG  ++L+ P
Sbjct: 63 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 99

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 49.9 bits (119), Expect = 1e-07
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+   +  ++AE  LL     HG+FL R S   + D+SLS                 F  
Sbjct: 4  WFHRDLSGLDAET-LLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 62

Query: 61 QKAGRTTIHYPELVEHY------SKDADGLCVNLRKP 91
             G       ELVE+Y       +D DG  ++L+ P
Sbjct: 63 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 99

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           W+   I  +EAE  LLL     G+FL R S+S   D +LS  +  +           +  
Sbjct: 6   WFHPNITGVEAEN-LLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYD 64

Query: 61  QKAGRTTIHYPELVEHYS------KDADGLCVNLRKP 91
              G       ELV++Y       K+ +G  + L+ P
Sbjct: 65  LYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP 101

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 38.3 bits (89), Expect = 8e-04
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
           W+ G +   EAEK LL  +  HG+FL+R+S+S   D+ LS
Sbjct: 112 WFHGHLSGKEAEK-LLTEKGKHGSFLVRESQSHPGDFVLS 150

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 5/55 (9%)

Query: 131 VEHGYRMPCPPG-----CPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            E   R   P           +  IM ECW  +   R T   ++  L      EG
Sbjct: 285 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 5/49 (10%)

Query: 131 VEHGYRMPCPP-----GCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
                R   P           L  +M ECW ++P  R T   ++  L  
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 131 VEHGYRMPCPP-----GCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
                R   P       C  ++  +M ECW  +P  R T   ++  L   
Sbjct: 280 CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 6/54 (11%)

Query: 131 VEHGYRMPCPPGC------PPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
                R   P            L + + +CW +D   R T +  + ++ +   +
Sbjct: 266 SREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 8/49 (16%), Positives = 14/49 (28%), Gaps = 5/49 (10%)

Query: 131 VEHGYRMPCPPGCPP-----RLYDIMLECWLKDPVKRPTFETLQWKLED 174
           V    R               L + + ECW  D   R +   +  ++  
Sbjct: 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	189
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.94
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.91
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.85
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.85
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.83
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.82
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.82
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.81
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.81
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.81
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.81
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.81
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.79
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.79
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.78
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.78
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.78
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.78
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.78
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.78
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.78
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.78
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.77
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.77
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.77
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.76
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.76
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.76
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.76
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.76
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.75
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.75
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.75
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.75
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.75
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.74
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.74
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.74
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.74
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.74
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.73
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.73
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.73
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.73
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.73
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.73
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.73
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.72
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.72
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.72
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.71
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.71
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.71
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.71
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.71
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.71
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.71
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.71
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.71
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.7
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.7
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.7
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.7
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.7
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.7
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.7
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.7
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.7
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.69
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.69
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.69
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.69
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.69
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.69
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.69
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.69
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.69
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.69
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.69
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.69
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.68
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.68
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.68
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.67
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.67
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.67
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.67
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.67
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.67
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.67
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.67
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.66
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.66
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.66
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.66
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.66
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.66
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.65
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.65
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.64
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.64
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.64
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.64
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.64
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.64
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.63
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.63
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.63
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.63
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.62
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.62
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.62
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.61
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.61
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.61
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.61
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.6
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.6
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.59
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.59
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.59
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.59
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.58
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.58
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.58
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.58
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.57
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.57
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.57
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.57
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.56
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.56
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.56
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.56
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.56
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.55
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.55
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.55
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.55
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.55
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.54
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.54
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.54
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.54
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.54
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.54
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.54
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.54
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.54
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.54
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.53
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.53
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.53
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.53
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.53
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.53
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.53
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.53
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.53
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.52
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.52
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.51
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.51
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.51
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.51
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.51
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.5
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.5
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.5
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.5
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.5
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.5
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.5
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.5
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.49
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.49
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.49
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.49
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.49
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.49
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.49
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.49
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.48
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.48
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.48
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.48
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.48
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.47
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.47
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.47
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.47
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.47
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.47
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.47
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.47
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.47
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.47
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.47
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.2
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.46
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.46
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.46
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.46
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.46
3bhy_A	283	Death-associated protein kinase 3; death associate	99.45
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.45
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.45
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.45
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.45
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.45
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.45
3uqc_A	286	Probable conserved transmembrane protein; structur	99.44
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.44
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.44
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.44
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.44
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.43
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.43
3niz_A	311	Rhodanese family protein; structural genomics, str	99.43
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.43
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.43
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.43
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.43
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.43
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.42
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.42
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.42
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.42
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.42
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.42
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.42
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.41
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.41
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.41
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.41
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.4
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.4
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.4
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.4
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.4
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.4
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.4
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.4
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.39
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.39
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.39
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.39
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.39
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.39
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.38
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.38
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.38
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.38
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.38
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.37
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.37
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.36
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.36
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.36
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.36
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.36
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.35
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.35
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.34
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.34
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.34
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.33
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.33
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.32
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.31
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.31
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.3
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.3
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.28
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.28
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.28
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.28
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.28
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.27
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.27
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.27
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.26
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.26
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.26
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.26
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.25
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.25
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.25
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.24
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.24
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.24
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.23
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.23
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.23
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.22
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.22
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.21
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.21
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.18
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.15
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.12
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.1
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.1
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.03
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.01
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.01
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.82
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.53
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	98.38
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.72
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	97.45
1uur_A	473	Stata protein, STAT protein; transcription activat	97.32
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	96.66
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.54
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	96.29
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.18
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	95.9
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	95.89
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	95.79
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	95.78
3op0_A	323	Signal transduction protein CBL-C; structural geno	95.43
1yvl_A	683	Signal transducer and activator of transcription 1	93.76
1y1u_A	585	Signal transducer and activator of transcription;	93.35
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	93.23
1bf5_A	575	Signal transducer and activator of transcription 1	91.49
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	91.22
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	89.18
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	86.1

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=4.8e-31  Score=197.78  Aligned_cols=170  Identities=14%  Similarity=0.207  Sum_probs=134.5

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-cc---CCCCCcCHhHHHHHhh
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QK---AGRTTIHYPELVEHYS   78 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl---~~~~~~~l~~li~~~~   78 (189)
                      +..++|+|++++++.+...+..|||+|++++ |++.-.++.  .+          ... ..   .....++..+++.+..
T Consensus        69 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~-G~L~~~l~~--~~----------~~~~~~~~~~~~~~l~~~~~~~i~~  135 (299)
T 4asz_A           69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKH-GDLNKFLRA--HG----------PDAVLMAEGNPPTELTQSQMLHIAQ  135 (299)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSEEEEEECCTT-CBHHHHHHH--TS----------HHHHHC----CCCCCCHHHHHHHHH
T ss_pred             HHhCCCCCCccEEEEEeeCCEEEEEEEcCCC-CcHHHHHHh--cC----------cccccccccCCCCCCCHHHHHHHHH
Confidence            3578999999999999888889999999998 422111111  00          000 00   1123455778889999


Q ss_pred             hccCCceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEE
Q psy1684          79 KDADGLCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVD  116 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-Vws  116 (189)
                      +++.|+.|+|..+++|||+ |+               |+|                       ||. ..+.|+. + |||
T Consensus       136 qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS  215 (299)
T 4asz_A          136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS  215 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHH
Confidence            9999999999999999996 55               333                       322 4567999 9 999


Q ss_pred             ec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         117 FG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       117 fG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      ||             |.+.++.+++..+.+|.+++.|..||+++++||.+||+.||++||||++|...|+++.+ ..|.|
T Consensus       216 ~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~-~~p~~  294 (299)
T 4asz_A          216 LGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK-ASPVY  294 (299)
T ss_dssp             HHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH-HSCCC
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh-cCCcc
Confidence            99             77888899999999999999999999999999999999999999999999999999876 56777


Q ss_pred             CCC
Q psy1684         184 KEA  186 (189)
Q Consensus       184 ~~~  186 (189)
                      .|.
T Consensus       295 ldi  297 (299)
T 4asz_A          295 LDI  297 (299)
T ss_dssp             SCC
T ss_pred             ccC
Confidence            764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=2.1e-28  Score=193.40  Aligned_cols=187  Identities=44%  Similarity=0.724  Sum_probs=155.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|....+.+|+||||++...+|.|+||++..   ..+.++||+|.+..+|  |+.....|. +.+++
T Consensus        67 w~~g~~~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~Li  146 (452)
T 1fmk_A           67 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV  146 (452)
T ss_dssp             TEEETCCHHHHHHHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHH
T ss_pred             cccCCccHHHHHHHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHHHH
Confidence            99999999999999987777889999999998889999999852   2458999999987766  787777888 99999


Q ss_pred             HHhhhccCCceeeccCCcccccccc--cccccC-----------------------------------------------
Q psy1684          75 EHYSKDADGLCVNLRKPCVQVSCRI--YLVHGT-----------------------------------------------  105 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~~~p~--~l~~~~-----------------------------------------------  105 (189)
                      .++...++|++..+..+|... .|.  +++++.                                               
T Consensus       147 ~~y~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~  225 (452)
T 1fmk_A          147 AYYSKHADGLCHRLTTVCPTS-KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA  225 (452)
T ss_dssp             HHHTTCCTTSSSCCCEECCCC-CCCCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHH
T ss_pred             HHhhhccccchhhcccccccc-ccccCCCCccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHH
Confidence            999988888876555443211 000  000000                                               


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       226 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD  305 (452)
T 1fmk_A          226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  305 (452)
T ss_dssp             HHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence                                                                                            


Q ss_pred             ------------------------------------------------CCCCccc-e-EEEec-------------CCCC
Q psy1684         106 ------------------------------------------------NLSGVVV-S-AVDFG-------------SGGM  122 (189)
Q Consensus       106 ------------------------------------------------~~~~~~~-s-VwsfG-------------~~~~  122 (189)
                                                                      ..+.++. + |||||             |.+.
T Consensus       306 lkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  385 (452)
T 1fmk_A          306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  385 (452)
T ss_dssp             CSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence                                                            2355788 9 99999             6778


Q ss_pred             ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCCC
Q psy1684         123 TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEASG  188 (189)
Q Consensus       123 ~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~~~  188 (189)
                      +..++...+..|.+++.|..||+++.+||.+||+.||++||||++|++.|+.++.+.+++|++.+.
T Consensus       386 ~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~~~~  451 (452)
T 1fmk_A          386 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN  451 (452)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCSCC
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccccccC
Confidence            888999999999999999999999999999999999999999999999999999999999998875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=2e-30  Score=196.87  Aligned_cols=176  Identities=14%  Similarity=0.198  Sum_probs=130.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+|++++++.|...+..|||+|++++ |++.-.+..  ....... .   ..+-......++..+++.+..+++.
T Consensus        97 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~-G~L~~~l~~--~~~~~~~-~---~~~~~~~~~~l~~~~~~~i~~qia~  169 (329)
T 4aoj_A           97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH-GDLNRFLRS--HGPDAKL-L---AGGEDVAPGPLGLGQLLAVASQVAA  169 (329)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSEEEEEECCTT-CBHHHHHHT--SSCC---------------CCSCCHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCC-CcHHHHHHh--cCccccc-c---cccccccCCCCCHHHHHHHHHHHHH
Confidence            4578999999999999888889999999998 432111111  0000000 0   0000011234568888999999999


Q ss_pred             CceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec--
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      |+.|+|..+++|||+ |+               |+|+                       |. ....|+. + |||||  
T Consensus       170 gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvv  249 (329)
T 4aoj_A          170 GMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV  249 (329)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHH
Confidence            999999999999996 55               4433                       22 5667999 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEA  186 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~  186 (189)
                                 |.+.+..+++..+.+|.+++.|..||+++++||.+||+.||++||||+||++.|+.+.+ ..|.|.|.
T Consensus       250 l~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~-~pp~~ld~  327 (329)
T 4aoj_A          250 LWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ-APPVYLDV  327 (329)
T ss_dssp             HHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH-SCC-----
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh-CCcccccC
Confidence                       77888899999999999999999999999999999999999999999999999999887 45666553

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=4e-28  Score=195.36  Aligned_cols=188  Identities=44%  Similarity=0.720  Sum_probs=151.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|....+.+|.||||++...+|.|+|+++..   ..+.++||+|....+|  |+.....|. +.+|+
T Consensus       150 wy~g~i~r~~ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~eLv  229 (535)
T 2h8h_A          150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV  229 (535)
T ss_dssp             TBCCSCCHHHHHHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHHHH
T ss_pred             eeccccCHHHHHHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHHhh
Confidence            99999999999999987777889999999998889999999852   2458999999987766  777777788 99999


Q ss_pred             HHhhhccCCceeeccCCcccc------------cccc-----------------cccccC--------------------
Q psy1684          75 EHYSKDADGLCVNLRKPCVQV------------SCRI-----------------YLVHGT--------------------  105 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~------------~~p~-----------------~l~~~~--------------------  105 (189)
                      .++...++|++..+..+|...            .++.                 +.+...                    
T Consensus       230 ~~y~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~  309 (535)
T 2h8h_A          230 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF  309 (535)
T ss_dssp             HHHHHCCTTSSSCCCEECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHH
T ss_pred             eeeccccCccccccccccccccccccccCccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHH
Confidence            999998888776554443211            0000                 000000                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       310 ~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  389 (535)
T 2h8h_A          310 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  389 (535)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence                                                                                            


Q ss_pred             -----------------------------------------------CCCCccc-e-EEEec-------------CCCCC
Q psy1684         106 -----------------------------------------------NLSGVVV-S-AVDFG-------------SGGMT  123 (189)
Q Consensus       106 -----------------------------------------------~~~~~~~-s-VwsfG-------------~~~~~  123 (189)
                                                                     ..+.|+. + |||||             |.+.+
T Consensus       390 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~  469 (535)
T 2h8h_A          390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV  469 (535)
T ss_dssp             SGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC
T ss_pred             CHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence                                                           2345788 9 99999             67778


Q ss_pred             hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCCC
Q psy1684         124 NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEASG  188 (189)
Q Consensus       124 ~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~~~  188 (189)
                      ..+++..+..+.+++.|..||.++++||.+||+.||++||||.+|++.|+.++...+++|++.+.
T Consensus       470 ~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~~  534 (535)
T 2h8h_A          470 NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN  534 (535)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSCC---
T ss_pred             HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcccCcccc
Confidence            88999999999999999999999999999999999999999999999999999999999998875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.95  E-value=1.2e-27  Score=189.19  Aligned_cols=186  Identities=42%  Similarity=0.750  Sum_probs=151.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||++...+|.|+||++..   ..+.++||+|....+|  |+.....|. +.+++
T Consensus        72 W~~g~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLv  151 (454)
T 1qcf_A           72 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV  151 (454)
T ss_dssp             TEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHH
T ss_pred             ccccccchhhhhhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHHHHH
Confidence            99999999999999987777899999999998889999999863   2458999999987766  777677788 99999


Q ss_pred             HHhhhccCCceeeccCCccccc-----------ccc-----------------cccccC---------------------
Q psy1684          75 EHYSKDADGLCVNLRKPCVQVS-----------CRI-----------------YLVHGT---------------------  105 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~~-----------~p~-----------------~l~~~~---------------------  105 (189)
                      .++....+|++..+..++....           ++.                 +.+...                     
T Consensus       152 ~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~  231 (454)
T 1qcf_A          152 DHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL  231 (454)
T ss_dssp             HHHTSSCTTSSSCCCSBCCCCCCCCCCCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHH
T ss_pred             HHHHhccCCccccccccccccCccccccccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHH
Confidence            9888877777655544432210           000                 000000                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       232 ~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  311 (454)
T 1qcf_A          232 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR  311 (454)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCS
T ss_pred             HHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence                                                                                            


Q ss_pred             ----------------------------------------------CCCCccc-e-EEEec-------------CCCCCh
Q psy1684         106 ----------------------------------------------NLSGVVV-S-AVDFG-------------SGGMTN  124 (189)
Q Consensus       106 ----------------------------------------------~~~~~~~-s-VwsfG-------------~~~~~~  124 (189)
                                                                    ..+.++. + |||||             |.+.+.
T Consensus       312 p~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~  391 (454)
T 1qcf_A          312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN  391 (454)
T ss_dssp             GGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             HHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH
Confidence                                                          2356888 9 99999             777888


Q ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC
Q psy1684         125 AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEA  186 (189)
Q Consensus       125 ~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~  186 (189)
                      .++...+..+.+++.|..||+++++||.+||+.||++||||.+|++.|+.++++.+++|++.
T Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~~~~  453 (454)
T 1qcf_A          392 PEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYEEI  453 (454)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCSSBCC
T ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccccccC
Confidence            89999999999999999999999999999999999999999999999999999999999875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=4.9e-30  Score=193.02  Aligned_cols=163  Identities=19%  Similarity=0.300  Sum_probs=126.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-c---cCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-Q---KAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-y---l~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|+++++|+|...+..+||+|++++ |++.-.+..  ....       ...+ .   ......+...+++.+..+
T Consensus        84 ~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~-G~L~~~L~~--~~~~-------~~~~~~~~~~~~~~~l~~~~~~~i~~q  153 (308)
T 4gt4_A           84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSH-GDLHEFLVM--RSPH-------SDVGSTDDDRTVKSALEPPDFVHLVAQ  153 (308)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCSS-CBHHHHHHT--TCSS-------CCCC-----CCEECCCCHHHHHHHHHH
T ss_pred             HhCCCCCCCCcceEEEECCEEEEEEEcCCC-CcHHHHHHh--hCcc-------ccccccccccccccCCCHHHHHHHHHH
Confidence            468999999999999888889999999998 432111111  0000       0000 0   000123447788889999


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-Vwsf  117 (189)
                      ++.|+.|+|+.+++|||+ |+               |+|+..                        ..+.||. + ||||
T Consensus       154 ia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSf  233 (308)
T 4gt4_A          154 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY  233 (308)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhH
Confidence            999999999999999996 44               444322                        4577999 9 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                      |             |.+.+..+++..+.+|.+++.|+.||+++++||.+||+.||++||||+||++.|+.+.
T Consensus       234 Gvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          234 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            9             7888899999999999999999999999999999999999999999999999997653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=5.2e-27  Score=191.53  Aligned_cols=91  Identities=27%  Similarity=0.342  Sum_probs=80.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++ +.+|.|+||++.  .+.++||+|.+..+|  ++.....|. +.+||+||
T Consensus       163 wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s-~~~~~~~lsv~~--~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~~y  239 (613)
T 2ozo_A          163 WYHSSLTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIY--GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL  239 (613)
T ss_dssp             TBCTTCCHHHHHHHHSSSCCCTTCEEEEEC-SSTTEEEEEEEE--TTEEEEEEEEECTTCCEECTTSCEESSHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHhhcCCCCceEEEEec-CCCCCEEEEEEE--CCeEEEEEEEECCCCCEEECCCCCcCCHHHHHHHH
Confidence            999999999999999766668999999999 667999999999  999999999987777  677677898 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ...++|+.+.+..+|..
T Consensus       240 ~~~~~~l~~~L~~pC~~  256 (613)
T 2ozo_A          240 KLKADGLIYCLKEACPN  256 (613)
T ss_dssp             HHCCTTCSSCCCSBCCC
T ss_pred             hhCCCCceecccccccc
Confidence            99999998888777643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.94  E-value=2.2e-26  Score=188.39  Aligned_cols=91  Identities=31%  Similarity=0.439  Sum_probs=82.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++ +.+|.|+||++.  .+.++||+|.+..+|  ++.+...|. +.+||+||
T Consensus       168 Wy~g~isr~~ae~~L~~~~~~~G~FLvR~s-~~~g~y~lsv~~--~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv~~y  244 (635)
T 4fl3_A          168 WFHGKISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLH--EGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY  244 (635)
T ss_dssp             TBCCSCCHHHHHHHHHSSSCCTTCEEEEES-SSSSCEEEEEEE--TTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHH
T ss_pred             ceeccCCHHHHHHHHHcCCCCCceEEEEec-CCCCCEEEEEEE--CCEEEEEEEEECCCCCEEeCCCCccCCHHHHHHHh
Confidence            999999999999999877777899999999 566999999999  999999999887777  777778899 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ...++|+...+..||..
T Consensus       245 ~~~~~~l~~~L~~p~~~  261 (635)
T 4fl3_A          245 SYKADGLLRVLTVPCQK  261 (635)
T ss_dssp             TTCCTTSSSCCCSBCCC
T ss_pred             hhCCCCCccccCccCcC
Confidence            99999999999888764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=2.1e-26  Score=183.85  Aligned_cols=173  Identities=29%  Similarity=0.479  Sum_probs=141.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|..  ..+|+||||++...+|.|+||++.  .+.++||+|....+|  |+.....|. +.+++.++
T Consensus       107 wyhg~i~r~~ae~ll~~--~~~G~fLvR~s~~~~~~~~lsv~~--~~~v~h~~I~~~~~g~~~~~~~~~F~sl~eLv~~~  182 (495)
T 1opk_A          107 WYHGPVSRNAAEYLLSS--GINGSFLVRESESSPGQRSISLRY--EGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH  182 (495)
T ss_dssp             TEEEECCHHHHHHHGGG--CCTTEEEEEECSSSTTCEEEEEEE--TTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHH
T ss_pred             hhccCCCHHHHHHHhhC--CCCceEEEEeCCCCCCceEEEEee--CCeEEEEEEEecCCCceEeccCccchhHHHHhhhh
Confidence            99999999999999853  467999999999888999999999  999999999987777  777777888 99999999


Q ss_pred             hhccCCceeeccCCcccccccc--------------------------------cccccC--------------------
Q psy1684          78 SKDADGLCVNLRKPCVQVSCRI--------------------------------YLVHGT--------------------  105 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~p~--------------------------------~l~~~~--------------------  105 (189)
                      ...++|+...+..++.....|.                                +.+...                    
T Consensus       183 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~  262 (495)
T 1opk_A          183 STVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE  262 (495)
T ss_dssp             TTCCTTSSSCCCEECCCCSCCCCSSSCSSSSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHH
T ss_pred             cccccccchhccccccccccccccccCccccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHH
Confidence            9888887765543332211110                                000000                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       263 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr  342 (495)
T 1opk_A          263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR  342 (495)
T ss_dssp             HHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence                                                                                            


Q ss_pred             -------------------------------------------------CCCCccc-e-EEEec-------------CCC
Q psy1684         106 -------------------------------------------------NLSGVVV-S-AVDFG-------------SGG  121 (189)
Q Consensus       106 -------------------------------------------------~~~~~~~-s-VwsfG-------------~~~  121 (189)
                                                                       ..+.|+. + |||||             |.+
T Consensus       343 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~  422 (495)
T 1opk_A          343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG  422 (495)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCC
Confidence                                                             1245788 9 99999             677


Q ss_pred             CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         122 MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       122 ~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                      .+..++...+..+.+++.|..||+++++||.+||+.||++||||.+|++.|+.+++
T Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          423 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            77788888889999999999999999999999999999999999999999988765

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=8.7e-26  Score=178.33  Aligned_cols=174  Identities=34%  Similarity=0.550  Sum_probs=140.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|..  ..+|.||||++.+..|.|+|+++.  .+.++|++|....++ ++.....|. +.+++.++.
T Consensus        82 wyhg~i~r~~ae~~L~~--~~~G~FlvR~S~~~~g~~~Lsv~~--~~~v~H~~I~~~~~~~~i~~~~~F~sl~eLv~~y~  157 (450)
T 1k9a_A           82 WFHGKITREQAERLLYP--PETGLFLVRESTNYPGDYTLCVSC--EGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT  157 (450)
T ss_dssp             TBCTTCCHHHHHHHTCS--CCTTEEEEEECSSSTTSEEEEEEC--SSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHH
T ss_pred             ccccCcCHHHhhhhhcc--CCCceEEEEecCCCCCceEEEEEe--CCeeeEEEEEecCCceEeccccccccHHHHHhhhc
Confidence            99999999999999943  356999999999988999999999  899999999776666 888777888 999999988


Q ss_pred             hccCCceeeccCCccccccc--------------c-----------------cccccC----------------------
Q psy1684          79 KDADGLCVNLRKPCVQVSCR--------------I-----------------YLVHGT----------------------  105 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~~~p--------------~-----------------~l~~~~----------------------  105 (189)
                      ..++|++..+..++......              .                 +.+...                      
T Consensus       158 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~  237 (450)
T 1k9a_A          158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEA  237 (450)
T ss_dssp             HCCTTSSSCCCEECCCTTCEEHHHHHHHTTCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHH
T ss_pred             ccccchhhhccccccccCcccchhhhcccccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHH
Confidence            87777665444332211000              0                 000000                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy1684         106 --------------------------------------------------------------------------------  105 (189)
Q Consensus       106 --------------------------------------------------------------------------------  105 (189)
                                                                                                      
T Consensus       238 ~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp  317 (450)
T 1k9a_A          238 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA  317 (450)
T ss_dssp             HHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             HHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCH
Confidence                                                                                            


Q ss_pred             -----------------------------------------CCCCccc-e-EEEec-------------CCCCChHHHHH
Q psy1684         106 -----------------------------------------NLSGVVV-S-AVDFG-------------SGGMTNAEVLH  129 (189)
Q Consensus       106 -----------------------------------------~~~~~~~-s-VwsfG-------------~~~~~~~~~~~  129 (189)
                                                               ....++. + |||||             |++.+..++..
T Consensus       318 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~  397 (450)
T 1k9a_A          318 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  397 (450)
T ss_dssp             GGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH
T ss_pred             hhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                                                     2456889 9 99999             66777788888


Q ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         130 QVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       130 ~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      .+..|.+++.|..||+++++||.+||+.||++||||.+|++.|+.+.+.
T Consensus       398 ~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          398 RVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999998864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=5.9e-28  Score=184.74  Aligned_cols=169  Identities=18%  Similarity=0.236  Sum_probs=123.3

Q ss_pred             CCh-HHHHHHhcCCCCC-CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           6 IKR-IEAEKKLLLPEND-HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         6 l~~-~n~~~lL~~~~~~-~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      +.| +|++++++.|..+ ...+||+|++++ |++.-.++.. ......+.....    -.....++..+++.+..+++.|
T Consensus       124 l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~-G~L~~~L~~~-~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~qia~g  197 (353)
T 4ase_A          124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKF-GNLSTYLRSK-RNEFVPYKVAPE----DLYKDFLTLEHLICYSFQVAKG  197 (353)
T ss_dssp             HCCCTTBCCEEEEECCTTSCCEEEEECCTT-EEHHHHHHHT-GGGBCCC-----------CTTCBCHHHHHHHHHHHHHH
T ss_pred             cCCCCcEEEEEEEEEecCCEEEEEEEcCCC-CCHHHHHHhc-ccccccccccch----hhccccCCHHHHHHHHHHHHHH
Confidence            444 8999999988654 457999999998 4221111110 000000000000    0012234578889999999999


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG---  118 (189)
                      +.|+|..+++|||+ |+               |+|+..                        ..+.||. + |||||   
T Consensus       198 l~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l  277 (353)
T 4ase_A          198 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL  277 (353)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHH
Confidence            99999999999996 44               555432                        4567999 9 99999   


Q ss_pred             ----------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 ----------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 ----------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                                |++.+ ..++...+.+|.+++.|+.||+++++||.+||+.||++||||++|++.|+.++++..
T Consensus       278 ~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~  350 (353)
T 4ase_A          278 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  350 (353)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence                      66665 356667788999999999999999999999999999999999999999999998643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=7e-25  Score=169.52  Aligned_cols=71  Identities=31%  Similarity=0.651  Sum_probs=64.5

Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      +.++. + |||||             |.+.+..++...+..+.+++.|..||+++++||.+||+.||++||||++|++.|
T Consensus       290 ~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L  369 (377)
T 3cbl_A          290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL  369 (377)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            45788 9 99999             677788888888999999999999999999999999999999999999999999


Q ss_pred             HHHHhh
Q psy1684         173 EDFFTM  178 (189)
Q Consensus       173 ~~~~~~  178 (189)
                      +.+.+.
T Consensus       370 ~~i~~~  375 (377)
T 3cbl_A          370 QSIRKR  375 (377)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            988753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.91  E-value=6.6e-26  Score=170.17  Aligned_cols=152  Identities=16%  Similarity=0.215  Sum_probs=117.8

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a   81 (189)
                      +..++|+|++++++++. ++..+||+|+++++.     +..                 +|.. ...++..+++.+..+++
T Consensus        86 l~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGs-----L~~-----------------~l~~~~~~l~~~~~~~i~~qia  142 (307)
T 3omv_A           86 LRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS-----LYK-----------------HLHVQETKFQMFQLIDIARQTA  142 (307)
T ss_dssp             HTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB-----HHH-----------------HHHTSCCCCCHHHHHHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCC-----HHH-----------------HHhhcCCCCCHHHHHHHHHHHH
Confidence            45789999999999875 456899999999832     222                 3322 23466788888999999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccc-----------------------cC----CCCCccc-e-EEE
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT----NLSGVVV-S-AVD  116 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~----~~~~~~~-s-Vws  116 (189)
                      .|+.|+|..+++|||+ |+               |+|+                       |.    ..+.||. + |||
T Consensus       143 ~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS  222 (307)
T 3omv_A          143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS  222 (307)
T ss_dssp             HHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHH
T ss_pred             HHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHh
Confidence            9999999999999996 55               4443                       22    2456999 9 999


Q ss_pred             ec------------CCCCChH-HHHHHHHcCCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         117 FG------------SGGMTNA-EVLHQVEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       117 fG------------~~~~~~~-~~~~~v~~g~~~~----~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                      ||            |.+.++. .+...+..+.+.|    .|..||+++++||.+||+.||++||||++|++.|+.+..
T Consensus       223 ~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          223 YGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             HHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            99            7777654 4445556665543    456899999999999999999999999999999987654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.85  E-value=4.5e-24  Score=160.48  Aligned_cols=152  Identities=16%  Similarity=0.149  Sum_probs=108.9

Q ss_pred             CCCChHHHHHHhcCCCCCCC----cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHG----AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g----~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+...++    .|||+|+++++.     +..                 ++. ...+.....+.+..+
T Consensus        52 ~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gs-----L~~-----------------~l~-~~~l~~~~~~~i~~~  108 (303)
T 3hmm_A           52 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS-----LFD-----------------YLN-RYTVTVEGMIKLALS  108 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB-----HHH-----------------HHH-HCCBCHHHHHHHHHH
T ss_pred             hcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCc-----HHH-----------------HHH-hCCCCHHHHHHHHHH
Confidence            46889999999998765433    489999999732     222                 222 123446677788888


Q ss_pred             ccCCceeeccC--------Ccccccc-cc---------------ccc-------------------------ccCC----
Q psy1684          80 DADGLCVNLRK--------PCVQVSC-RI---------------YLV-------------------------HGTN----  106 (189)
Q Consensus        80 ~a~gl~~~~~~--------~~~~~~~-p~---------------~l~-------------------------~~~~----  106 (189)
                      ++.|+.|+|..        +++|||+ |+               |+|                         ||..    
T Consensus       109 ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~  188 (303)
T 3hmm_A          109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI  188 (303)
T ss_dssp             HHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCS
T ss_pred             HHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccc
Confidence            99999999976        8999996 55               333                         2221    


Q ss_pred             ---CCCccc-e-EEEec----------------------CCCC-----ChHHHHHHH-HcCCCCCCCCC-----CCHHHH
Q psy1684         107 ---LSGVVV-S-AVDFG----------------------SGGM-----TNAEVLHQV-EHGYRMPCPPG-----CPPRLY  148 (189)
Q Consensus       107 ---~~~~~~-s-VwsfG----------------------~~~~-----~~~~~~~~v-~~g~~~~~p~~-----~p~~~~  148 (189)
                         ...|+. + |||||                      |.++     ...++...+ ..+.+|+.|..     ++..+.
T Consensus       189 ~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~  268 (303)
T 3hmm_A          189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA  268 (303)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHH
T ss_pred             cccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHH
Confidence               124788 9 99999                      1111     234455555 45677777653     446889


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         149 DIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       149 ~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      +||.+||+.||++||||++|++.|+++.+.
T Consensus       269 ~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          269 KIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999998774

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.85  E-value=1.1e-23  Score=159.65  Aligned_cols=155  Identities=8%  Similarity=-0.058  Sum_probs=121.9

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+|++++++.....+..|||+|+++++.     +..                 +|.....++..+...+..+++.
T Consensus       104 l~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~-----L~~-----------------~l~~~~~l~e~~~~~~~~qi~~  161 (336)
T 4g3f_A          104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS-----LGQ-----------------LIKQMGCLPEDRALYYLGQALE  161 (336)
T ss_dssp             TTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB-----HHH-----------------HHHHHSSCCHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHH
Confidence            467899999999988777777899999998732     222                 2332345666777788889999


Q ss_pred             CceeeccCCcccccc-cc----------------cccc--------------------------cC-CCCCccc-e-EEE
Q psy1684          83 GLCVNLRKPCVQVSC-RI----------------YLVH--------------------------GT-NLSGVVV-S-AVD  116 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~----------------~l~~--------------------------~~-~~~~~~~-s-Vws  116 (189)
                      |+.|+|...++|||+ |+                |+|+                          |. .+..|+. + |||
T Consensus       162 aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwS  241 (336)
T 4g3f_A          162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS  241 (336)
T ss_dssp             HHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred             HHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHH
Confidence            999999999999996 66                3332                          11 5567999 9 999


Q ss_pred             ec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         117 FG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       117 fG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      +|            |.+.+..+++..+..+..+  ..|+.+|+++.+|+.+||+.||++|||+.||++.|..+++..
T Consensus       242 lGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          242 SCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             HHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence            99            7776666777777665432  367899999999999999999999999999999999888753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.83  E-value=1.4e-22  Score=154.33  Aligned_cols=145  Identities=9%  Similarity=0.070  Sum_probs=116.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.....+..|||+|+++++.     +..                 +|..  ...+...+...+..+++
T Consensus        78 ~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~-----L~~-----------------~i~~~~~~~~~e~~~~~~~~qi~  135 (350)
T 4b9d_A           78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGD-----LFK-----------------RINAQKGVLFQEDQILDWFVQIC  135 (350)
T ss_dssp             HHCCCTTBCCEEEEEEETTEEEEEEECCTTCB-----HHH-----------------HHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             HHCCCCCCCcEEEEEEECCEEEEEEeCCCCCc-----HHH-----------------HHHHcCCCCCCHHHHHHHHHHHH
Confidence            35789999999887776677899999988732     222                 2221  22344566777888999


Q ss_pred             CCceeeccCCcccccc-cc---------------ccccc---------------------C-CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHG---------------------T-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~---------------------~-~~~~~~~-s-VwsfG---  118 (189)
                      .|+.|+|..+|+|||+ |+               |+|+.                     . .+..|+. + |||+|   
T Consensus       136 ~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvil  215 (350)
T 4b9d_A          136 LALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVL  215 (350)
T ss_dssp             HHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHH
Confidence            9999999999999996 66               33332                     2 5667999 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..+++.++.++..++.|..+|+++.+||.+||+.||++|||++|+++
T Consensus       216 yemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          216 YELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                     8888889999999888888888999999999999999999999999999976

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.82  E-value=1e-22  Score=151.74  Aligned_cols=145  Identities=10%  Similarity=0.048  Sum_probs=108.5

Q ss_pred             CCCChHHHHHHhcCCCC----CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPEN----DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~----~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+..    +...|||+|+++++.     +..                 ++.....++...+..+..+
T Consensus        80 ~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~-----L~~-----------------~l~~~~~l~~~~~~~~~~q  137 (290)
T 3fpq_A           80 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGT-----LKT-----------------YLKRFKVMKIKVLRSWCRQ  137 (290)
T ss_dssp             HTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCB-----HHH-----------------HHHHHSSCCHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCC-----HHH-----------------HHHhcCCCCHHHHHHHHHH
Confidence            46789999998875422    233688889888732     222                 3333345556777788889


Q ss_pred             ccCCceeeccCC--cccccc-cc-----------------------------------cccccCCCCCccc-e-EEEec-
Q psy1684          80 DADGLCVNLRKP--CVQVSC-RI-----------------------------------YLVHGTNLSGVVV-S-AVDFG-  118 (189)
Q Consensus        80 ~a~gl~~~~~~~--~~~~~~-p~-----------------------------------~l~~~~~~~~~~~-s-VwsfG-  118 (189)
                      ++.|+.|+|...  ++|||+ |+                                   ++|||...+.|+. + ||||| 
T Consensus       138 i~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGv  217 (290)
T 3fpq_A          138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGM  217 (290)
T ss_dssp             HHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHH
Confidence            999999999987  999996 66                                   4444445667999 9 99999 


Q ss_pred             -----------CCCCC-hHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -----------SGGMT-NAEVLHQVEHGYRMP-CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -----------~~~~~-~~~~~~~v~~g~~~~-~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                 |.+.+ ..++...+..+.+++ .|..+++++.+|+.+||+.||++|||++|+++
T Consensus       218 ilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          218 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       65544 456667777776553 46678999999999999999999999999875

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.82  E-value=8.6e-20  Score=117.50  Aligned_cols=95  Identities=28%  Similarity=0.331  Sum_probs=82.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++.+...|. +.+||+||
T Consensus         7 Wyhg~isR~~Ae~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y   82 (112)
T 3k2m_A            7 WYHGPVSRNAAEYLLS--SGINGSFLVRESESSPGQRSISLRY--EGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH   82 (112)
T ss_dssp             TEEESCCHHHHHHHTT--TCCTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEESSTTCCBSSHHHHHHHH
T ss_pred             ceeeCCCHHHHHHHhc--cCCCceEEEEeCCCCCCCEEEEEEe--CCcEEEEEEEECCCCcEEECCCCeECCHHHHHHHH
Confidence            9999999999999985  3478999999999888999999999  999999999987777  677777898 99999999


Q ss_pred             hhccCCceeeccCCcccccccc
Q psy1684          78 SKDADGLCVNLRKPCVQVSCRI   99 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~p~   99 (189)
                      ...++|+...+..||.....|.
T Consensus        83 ~~~~~~l~~~L~~P~~~~~~p~  104 (112)
T 3k2m_A           83 STVADGLITTLHYPAPKRNKPT  104 (112)
T ss_dssp             HHCCTTSSSCCCEECCCC----
T ss_pred             hhCCCCCccCCCCCCCCCCCCC
Confidence            9999999999999987744443

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.81  E-value=2.5e-19  Score=114.11  Aligned_cols=93  Identities=41%  Similarity=0.692  Sum_probs=81.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++..   ..+.++||+|....+|  ++.+...|. +.+||
T Consensus         6 Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LI   85 (105)
T 1lkk_A            6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV   85 (105)
T ss_dssp             TBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHH
T ss_pred             eecCCCCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCHHHHH
Confidence            99999999999999976666899999999998889999999872   1368999999987666  777777898 99999


Q ss_pred             HHhhhccCCceeeccCCcc
Q psy1684          75 EHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~   93 (189)
                      +||....+|+.+.+..||.
T Consensus        86 ~~y~~~~~~l~~~L~~P~~  104 (105)
T 1lkk_A           86 RHYTNASDGLCTRLSRPCQ  104 (105)
T ss_dssp             HHHHHCCTTSSSCCCSBCC
T ss_pred             HHHhhCCCCCccCCcCcCC
Confidence            9999999999999988875

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.81  E-value=6.3e-22  Score=148.31  Aligned_cols=145  Identities=12%  Similarity=0.053  Sum_probs=115.1

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+|++++++....++..|||+|++++ |    ++..                 ++.....++..+...+..+++.
T Consensus        80 l~~l~HpnIv~l~~~~~~~~~~~ivmEy~~g-g----~L~~-----------------~l~~~~~l~e~~~~~~~~qi~~  137 (304)
T 3ubd_A           80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRG-G----DLFT-----------------RLSKEVMFTEEDVKFYLAELAL  137 (304)
T ss_dssp             CCCCCCTTEECEEEEEEETTEEEEEECCCTT-C----EEHH-----------------HHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCeEEEEEEECCEEEEEEEcCCC-C----CHHH-----------------HHHhcCCCCHHHHHHHHHHHHH
Confidence            4678899999999877777778999999987 4    2333                 2333345566677778889999


Q ss_pred             CceeeccCCcccccc-cc---------------ccccc---------------------C-CCCCccc-e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHG---------------------T-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~---------------------~-~~~~~~~-s-VwsfG----  118 (189)
                      |+.|+|..+++|||+ |+               |+|+.                     . ....|+. + |||+|    
T Consensus       138 aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily  217 (304)
T 3ubd_A          138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF  217 (304)
T ss_dssp             HHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHH
Confidence            999999999999996 66               34332                     2 4567999 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF-----ETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~-----~~i~~  170 (189)
                              |.+.+..+++..+.++. ++.|..+|+++.+|+.+||+.||++|||+     +||++
T Consensus       218 emltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          218 EMLTGTLPFQGKDRKETMTMILKAK-LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHhCCCCCCCcCHHHHHHHHHcCC-CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence                    88888889998887764 56788999999999999999999999984     56654

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.81  E-value=2.4e-19  Score=112.68  Aligned_cols=89  Identities=28%  Similarity=0.400  Sum_probs=80.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+||+||.
T Consensus         7 Wyhg~isr~~Ae~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~   82 (98)
T 3us4_A            7 WFHGKISGQEAVQQLQ--PPEDGLFLVRESARHPGDYVLCVSF--GRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYS   82 (98)
T ss_dssp             TBCCSCCHHHHHHHTC--SCCTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEEETTEEESSSSSEESSHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHcc--CCCCcEEEEEeCCCCCCcEEEEEEE--CCceEEEEEEEeCCEEEECCCCccCCHHHHHHHhh
Confidence            9999999999999995  3478999999999888999999999  999999999986555 787777888 999999999


Q ss_pred             hccCCceeeccCCcc
Q psy1684          79 KDADGLCVNLRKPCV   93 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~   93 (189)
                      ...+|+...+..||.
T Consensus        83 ~~~~~l~~~L~~P~p   97 (98)
T 3us4_A           83 KDKGAICTKLVRPKR   97 (98)
T ss_dssp             HCCTTSSSCCCSBCC
T ss_pred             hCCCCCeEcCCccCC
Confidence            999999999998875

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.81  E-value=1.5e-19  Score=114.05  Aligned_cols=92  Identities=30%  Similarity=0.413  Sum_probs=82.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++.+...|. +.+||+||
T Consensus         4 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y   81 (100)
T 1rja_A            4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRD--TQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYH   81 (100)
T ss_dssp             CBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECT--TSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEE--CCEEEEEEEEEcCCCcEEECCCCccCCHHHHHHHH
Confidence            9999999999999997655679999999999888999999999  999999999987667  677677888 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      .....|+...+..||..
T Consensus        82 ~~~~~~l~~~L~~p~~~   98 (100)
T 1rja_A           82 RAQSLSHGLRLAAPCRK   98 (100)
T ss_dssp             HHCCTTSSSCCCSBCCC
T ss_pred             hhCCCCCCCCCCccCCC
Confidence            99999998888888754

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.81  E-value=2.7e-19  Score=116.55  Aligned_cols=93  Identities=47%  Similarity=0.771  Sum_probs=83.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++.  .+.++||+|....+|  ++.+...|. +.+||+||
T Consensus        18 WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y   95 (121)
T 2dly_A           18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLD--EGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYY   95 (121)
T ss_dssp             SBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEES--SSCEEEEEEEECSSSCEEEETTEEESSHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEE--CCeEEEEEEEEcCCCCEEECCCCccCCHHHHHHHH
Confidence            9999999999999997666688999999999888999999999  999999999986666  777777898 99999999


Q ss_pred             hhccCCceeeccCCcccc
Q psy1684          78 SKDADGLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~   95 (189)
                      ....+|+...+..||...
T Consensus        96 ~~~~~~l~~~L~~P~~~~  113 (121)
T 2dly_A           96 TTTSDGLCVKLEKPCLKI  113 (121)
T ss_dssp             TTCCSSSSSCCCSBCCCC
T ss_pred             hhCCCCCceeCCeecCCC
Confidence            999999999999998764

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.79  E-value=5.6e-19  Score=112.58  Aligned_cols=91  Identities=34%  Similarity=0.505  Sum_probs=81.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+|++||.
T Consensus        10 Wyhg~isr~~Ae~lL~--~~~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv~~y~   85 (106)
T 3eaz_A           10 WFHGKITREQAERLLY--PPETGLFLVRESTNYPGDYTLCVSS--DGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT   85 (106)
T ss_dssp             TBCCSCCHHHHHHHTC--SCCTTEEEEEECTTSTTCEEEEEEE--TTEEEEEECEEETTEEESSSSSCBSSHHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHhC--CCCCCEEEEEECCCCCCcEEEEEEe--CCceEEEEEEecCCEEEECCCCccCCHHHHHHHHh
Confidence            9999999999999995  3478999999999888999999999  999999999876444 777677898 999999999


Q ss_pred             hccCCceeeccCCcccc
Q psy1684          79 KDADGLCVNLRKPCVQV   95 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~   95 (189)
                      ..++|+...+..||...
T Consensus        86 ~~~~gl~~~L~~P~~~~  102 (106)
T 3eaz_A           86 SDADGLCTRLIKPKVME  102 (106)
T ss_dssp             HCCTTSSSCCCEECCCC
T ss_pred             hCCCCCCeecCCcCCCC
Confidence            99999999999998764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.79  E-value=3.9e-21  Score=142.20  Aligned_cols=153  Identities=10%  Similarity=0.116  Sum_probs=115.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|+++++.....++..|||+|++.  |+    +..                 ++.....++..+...+..+.+.|+
T Consensus        69 ~l~HpnIv~~~~~~~~~~~~~ivmEy~~--g~----L~~-----------------~l~~~~~l~e~~~~~~~~qi~~al  125 (275)
T 3hyh_A           69 LLRHPHIIKLYDVIKSKDEIIMVIEYAG--NE----LFD-----------------YIVQRDKMSEQEARRFFQQIISAV  125 (275)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEEECCC--EE----HHH-----------------HHHHSCSCCHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCeEEEEEEECCEEEEEEeCCC--CC----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4678888888877666667788888763  31    112                 333344566677778888999999


Q ss_pred             eeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCc-cc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGV-VV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~-~~-s-VwsfG------  118 (189)
                      .|+|+.+++|||+ |+               |+|                    ||. .+..| +. + |||+|      
T Consensus       126 ~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~l  205 (275)
T 3hyh_A          126 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM  205 (275)
T ss_dssp             HHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHH
Confidence            9999999999996 66               333                    222 44555 57 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                            |.+.+..++...+.++. ++.|..+++++.+|+.+|++.||++|||++|+++.  .+++..-|+|
T Consensus       206 ltg~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h--pw~k~~~p~~  273 (275)
T 3hyh_A          206 LCRRLPFDDESIPVLFKNISNGV-YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD--DWFKVDLPEY  273 (275)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC--HHHHTTCCGG
T ss_pred             HHCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC--cccccCCChh
Confidence                  77777888888887774 56788999999999999999999999999999873  4555555555

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.78  E-value=6.7e-19  Score=111.81  Aligned_cols=90  Identities=26%  Similarity=0.324  Sum_probs=78.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-----CCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-----RTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-----~~~~~-l~~   72 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++..     ...|. +.+
T Consensus         6 Wyhg~isR~~Ae~lL~~~~-~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~   82 (104)
T 1d4t_A            6 VYHGKISRETGEKLLLATG-LDGSYLLRDSESVPGVYCLCVLY--HGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKN   82 (104)
T ss_dssp             TBCCSCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHH
T ss_pred             eEccCCCHHHHHHHHHhcC-CCCEEEEeeCCCCCCCEEEEEEE--CCeEEEEEEEECCCCeEEEeccCCCCCcccCCHHH
Confidence            9999999999999996433 67999999999888999999999  999999999987777  5552     56788 999


Q ss_pred             HHHHhhhccCCceeeccCCcc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~   93 (189)
                      ||+||....+|+...+..||.
T Consensus        83 LV~~y~~~~~~l~~~L~~P~~  103 (104)
T 1d4t_A           83 LISAFQKPDQGIVIPLQYPVE  103 (104)
T ss_dssp             HHHHHTSSSSSSSSCCCEECC
T ss_pred             HHHHHhhCCCCCeEECCCcCC
Confidence            999999999999888887764

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.78  E-value=6.1e-19  Score=113.91  Aligned_cols=94  Identities=45%  Similarity=0.684  Sum_probs=82.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec--CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR--SSFCLKMTTGRSLFET--QKAGRTTIH-YPELVE   75 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~--~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~   75 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++..  ..+.++|++|....+|  ++.+...|. +.+||+
T Consensus        14 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~   93 (114)
T 1blj_A           14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQ   93 (114)
T ss_dssp             SBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCCHHHHHH
Confidence            99999999999999976666899999999998889999999972  1368999999987666  777777888 999999


Q ss_pred             HhhhccCCceeeccCCccc
Q psy1684          76 HYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        76 ~~~~~a~gl~~~~~~~~~~   94 (189)
                      ||...++|+.+.+..||..
T Consensus        94 ~y~~~~~~l~~~L~~p~~~  112 (114)
T 1blj_A           94 HYSKKGDGLCQKLTLPCVN  112 (114)
T ss_dssp             HHHHCCSSSSSCCCCCSCC
T ss_pred             HhhhCCCCCceecCccCCC
Confidence            9999999999999998864

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.78  E-value=1.3e-18  Score=110.68  Aligned_cols=91  Identities=23%  Similarity=0.351  Sum_probs=78.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEecc-CC---c-cCC-CCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLF-ET---Q-KAG-RTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~-~g---y-l~~-~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++.  .+.++|++|.... +|   | +.+ ...|. +.+|
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~L   84 (105)
T 1nrv_A            7 WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCH--HQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQL   84 (105)
T ss_dssp             TBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEE--TTEEEEEEEEEC-----CCEESSTTSSCBSSHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEe--CCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHH
Confidence            9999999999999997666678999999999888999999999  9999999998754 44   4 443 46788 9999


Q ss_pred             HHHhhhccCCceeeccCCcc
Q psy1684          74 VEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~   93 (189)
                      |++|....+|+.+.+..||.
T Consensus        85 V~~y~~~~~~l~~~L~~p~~  104 (105)
T 1nrv_A           85 VDFYQLNKGVLPCKLKHHCI  104 (105)
T ss_dssp             HHHHTTCCTTSSSCCCEECC
T ss_pred             HHHhhhCCCCCcEeCCCcCC
Confidence            99999999999888888875

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.78  E-value=4.7e-19  Score=115.03  Aligned_cols=94  Identities=29%  Similarity=0.343  Sum_probs=83.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++...+|.|+||++.  .+.++||+|....+|  |+.....|. +.+||+||
T Consensus        18 WyhG~isR~~Ae~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y   93 (119)
T 2ecd_A           18 WYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLRY--EGRVYHYRINTTADGKVYVTAESRFSTLAELVHHH   93 (119)
T ss_dssp             SEEEECCHHHHHHHHH--TSCTTBEEEEEESSSTTEEEEEEEC--SSCEEEECCCCCSSSCCCCCSSCCCSSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHhc--CCCCCeEEEEeCCCCCCCEEEEEEE--CCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHHHH
Confidence            9999999999999995  3468999999999888999999999  999999999987777  676677888 99999999


Q ss_pred             hhccCCceeeccCCccccccc
Q psy1684          78 SKDADGLCVNLRKPCVQVSCR   98 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~p   98 (189)
                      ...++|+...+..||.....|
T Consensus        94 ~~~~~gl~~~L~~P~~~~~~p  114 (119)
T 2ecd_A           94 STVADGLVTTLHYPAPKCNKS  114 (119)
T ss_dssp             HHCCTTSSSCCCBCCSSCCSS
T ss_pred             hhCCCCCceECCCccCCCCCC
Confidence            999999999999998775444

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.78  E-value=1.2e-20  Score=145.41  Aligned_cols=167  Identities=21%  Similarity=0.267  Sum_probs=122.5

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++++++.+......|||+|++.+ |.+.-.+... ..+....+.+..      .....+...+++.+..+++.|+.
T Consensus       145 ~hpnIv~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~qi~~aL~  217 (370)
T 2psq_A          145 KHKNIINLLGACTQDGPLYVIVEYASK-GNLREYLRARRPPGMEYSYDINR------VPEEQMTFKDLVSCTYQLARGME  217 (370)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTT-CBHHHHHHHTCCC-----------------CCCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEeeEEEEEccCCCEEEEEEcCCC-CCHHHHHHhhCCccccccccccc------cccccCCHHHHHHHHHHHHHHHH
Confidence            799999999988877889999999887 4221111110 000000011100      01223457778888889999999


Q ss_pred             eeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |+               |+++..                        ....|+. + |||||     
T Consensus       218 ~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~e  297 (370)
T 2psq_A          218 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  297 (370)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHH
Confidence            999999999996 55               322211                        2455888 9 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                              |.+.+..++...+..+.+++.|..+|.++.+||.+||+.||++|||+.+|++.|+.+++...
T Consensus       298 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          298 IFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence                    66777788888888999999999999999999999999999999999999999999987654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.78  E-value=5.7e-21  Score=145.29  Aligned_cols=144  Identities=8%  Similarity=-0.034  Sum_probs=112.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.....+..|||+|++++ |+    +..                 ++. ...+...+...+..+++.|
T Consensus       126 ~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g-g~----L~~-----------------~l~-~~~l~e~~~~~~~~qi~~a  182 (346)
T 4fih_A          126 RDYQHENVVEMYNSYLVGDELWVVMEFLEG-GA----LTD-----------------IVT-HTRMNEEQIAAVCLAVLQA  182 (346)
T ss_dssp             HHCCCTTBCCEEEEEEETTEEEEEECCCTT-EE----HHH-----------------HHH-HSCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEEECCEEEEEEeCCCC-Cc----HHH-----------------HHH-cCCCCHHHHHHHHHHHHHH
Confidence            357899999999887777788999999987 42    212                 121 2235566677788899999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.|+|..+|+|||+ |+               |+|+                     |. ....|+. + |||+|     
T Consensus       183 L~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye  262 (346)
T 4fih_A          183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  262 (346)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            99999999999996 66               3332                     22 5567999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |.+.+..+++..+..+..+  +.+..+++++.+|+.+||..||++|||++|+++
T Consensus       263 ml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          263 MVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                   7888888888888776543  334578999999999999999999999999876

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.78  E-value=1.3e-18  Score=112.92  Aligned_cols=92  Identities=25%  Similarity=0.297  Sum_probs=79.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEec-cCC--ccC---CCCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL-FET--QKA---GRTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~-~~g--yl~---~~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++.  .+.++|++|... .+|  |+.   +...|. +.+|
T Consensus        16 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~L   93 (117)
T 3pqz_A           16 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCH--LQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQL   93 (117)
T ss_dssp             TBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEE--TTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHH
T ss_pred             cccCCCCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEe--CCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHH
Confidence            9999999999999997666678999999999988999999999  999999999985 455  333   246788 9999


Q ss_pred             HHHhhhccCCceeeccCCccc
Q psy1684          74 VEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~~   94 (189)
                      |+||....+|+.+.+..||..
T Consensus        94 V~~y~~~~~~l~~~L~~P~~~  114 (117)
T 3pqz_A           94 VEFHQLNRGILPCLLRHCCTR  114 (117)
T ss_dssp             HHHHHHCCTTSSSCCCEECC-
T ss_pred             HHHHhhCCCCCcEECCCcCcc
Confidence            999999999999999988865

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.78  E-value=9.4e-19  Score=110.98  Aligned_cols=90  Identities=31%  Similarity=0.340  Sum_probs=78.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-----CCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-----RTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-----~~~~~-l~~   72 (189)
                      ||||.|++.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++..     ...|. +.+
T Consensus         5 Wyhg~isR~~Ae~lL~~~~-~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~   81 (103)
T 1i3z_A            5 YYHGCLTKRECEALLLKGG-VDGNFLIRDSESVPGALCLCVSF--KKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQE   81 (103)
T ss_dssp             TEESSCCHHHHHHHHHTTC-STTEEEEEECSSSTTCEEEEEEC--SSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHH
T ss_pred             cccCCCCHHHHHHHHhhcC-CCceEEEEeCCCCCCCEEEEEEE--CCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHH
Confidence            9999999999999996533 68999999999888999999999  999999999987777  5652     56788 999


Q ss_pred             HHHHhhhccCCceeeccCCcc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~   93 (189)
                      ||+||....+|+...+..||.
T Consensus        82 LV~~y~~~~~~l~~~L~~P~~  102 (103)
T 1i3z_A           82 LVSKYGKPGQGLVVHLSNPIM  102 (103)
T ss_dssp             HHHHTTSSSSSSSSCCCEECC
T ss_pred             HHHHHhhCCCCCeEEcCCccC
Confidence            999999999999888887764

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.77  E-value=2.6e-19  Score=114.18  Aligned_cols=93  Identities=40%  Similarity=0.559  Sum_probs=81.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++..   ..+.++|++|....+|  ++.+...|. +.+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   86 (106)
T 1aot_F            7 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV   86 (106)
T ss_dssp             SCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESSHHHHH
T ss_pred             cCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCCHHHHH
Confidence            99999999999999976666889999999998889999999852   1568999999987666  777777898 99999


Q ss_pred             HHhhhccCCceeeccCCcc
Q psy1684          75 EHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~   93 (189)
                      +||....+|+.+.+..||.
T Consensus        87 ~~y~~~~~~l~~~L~~p~~  105 (106)
T 1aot_F           87 QHYSERAAGLSSRLVVPSH  105 (106)
T ss_dssp             HHHTTCCTTSSSCSCSSCC
T ss_pred             HHhccCCCCCcEeecccCC
Confidence            9999999999999998875

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.77  E-value=1.8e-18  Score=112.44  Aligned_cols=90  Identities=30%  Similarity=0.449  Sum_probs=78.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCC------CeeeEEEEE--eccCC--ccCCCCCcC-
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS------FCLKMTTGR--SLFET--QKAGRTTIH-   69 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~------~~v~h~~i~--~~~~g--yl~~~~~~~-   69 (189)
                      ||||.|+|.+|+++|.... .+|+||||++ +.++.|+||++.  .      +.++||+|.  ...+|  ++.+...|. 
T Consensus        11 Wyhg~isR~~Ae~lL~~~~-~~G~FLVR~S-~~~g~y~LSv~~--~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~s   86 (118)
T 3s9k_A           11 WYNKSISRDKAEKLLLDTG-KEGAFMVRDS-RTPGTYTVSVFT--KAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDS   86 (118)
T ss_dssp             TBCTTCCHHHHHHHHHHHC-CTTCEEEEEC-SSTTCEEEEEEE--CCSCSSSCEEEEEEEEECSCSSCCEEEECSCCCSC
T ss_pred             eecCCCCHHHHHHHHHhcC-CCCeEEEEee-CCCCCEEEEEEe--cccccCCCceEEEEEeEEECCCCCEEECCCcccCC
Confidence            9999999999999996432 5899999999 778999999998  5      899999994  45566  777777888 


Q ss_pred             HhHHHHHhhhccCCceeeccCCccc
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~   94 (189)
                      +.+||+||...++|+.+.+..||..
T Consensus        87 l~~LV~~y~~~~~~l~~~L~~Pv~~  111 (118)
T 3s9k_A           87 IPLLIQYHQYNGGGLVTRLRYPVCG  111 (118)
T ss_dssp             HHHHHHHHHHCCTTSSSCCCCCCCC
T ss_pred             HHHHHHHheeCCCCCccCCCCcCCC
Confidence            9999999999999999999988864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.77  E-value=1.6e-20  Score=144.99  Aligned_cols=153  Identities=22%  Similarity=0.318  Sum_probs=120.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||+|++.++.     +..                 ++... ..+...++..+..+++.
T Consensus       101 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  158 (373)
T 2qol_A          101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS-----LDS-----------------FLRKHDAQFTVIQLVGMLRGIAS  158 (373)
T ss_dssp             TTCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHH-----------------HHHTTTTCSCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEeeCCceEEEEeCCCCCc-----HHH-----------------HHHhCCCCCCHHHHHHHHHHHHH
Confidence            56789999999988877777899999887632     222                 23222 24557778888889999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC-------------------------CCCCccc-e-EEEec-
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~~~~~~~-s-VwsfG-  118 (189)
                      |+.++|..+++|+|+ |+               |+++..                         ....++. + ||||| 
T Consensus       159 aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~  238 (373)
T 2qol_A          159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI  238 (373)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHH
Confidence            999999999999996 54               222111                         2345788 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |.+.+..++...+..+.+++.|..+|.++.+||.+||+.||++||+|.+|++.|+.+++.
T Consensus       239 il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          239 VLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence                        566677888888888888888999999999999999999999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=4.7e-20  Score=142.34  Aligned_cols=155  Identities=17%  Similarity=0.235  Sum_probs=117.1

Q ss_pred             CCCCChHHHHHHhcCCCC-CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhc
Q psy1684           3 FGKIKRIEAEKKLLLPEN-DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKD   80 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~-~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~   80 (189)
                      +..++|+|++++++.+.. ....++|+|++..+.     +..                 ++... ..+...++..+..++
T Consensus       144 l~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi  201 (373)
T 3c1x_A          144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD-----LRN-----------------FIRNETHNPTVKDLIGFGLQV  201 (373)
T ss_dssp             STTCCCTTBCCCCEEECCCSSCCEEEEECCTTCB-----HHH-----------------HHHCTTCCCBHHHHHHHHHHH
T ss_pred             HHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCC-----HHH-----------------HHhhcccCCCHHHHHHHHHHH
Confidence            457789999998886543 345688888887622     222                 23222 223467778888899


Q ss_pred             cCCceeeccCCcccccc-cc---------------cccccC--------------------------CCCCccc-e-EEE
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------------NLSGVVV-S-AVD  116 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------------~~~~~~~-s-Vws  116 (189)
                      +.|+.++|..+++|+|+ |+               |+++..                          ....++. + |||
T Consensus       202 ~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS  281 (373)
T 3c1x_A          202 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS  281 (373)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHH
T ss_pred             HHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHH
Confidence            99999999999999996 55               332211                          2356788 9 999


Q ss_pred             ec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         117 FG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       117 fG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      ||             |.+.+..++...+..+.++..|..+|.++.+||.+||+.||++|||+++|++.|+.++.+.
T Consensus       282 lG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          282 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             HHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            99             5555666677778888888889999999999999999999999999999999999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.76  E-value=3.2e-20  Score=140.73  Aligned_cols=155  Identities=23%  Similarity=0.312  Sum_probs=120.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||+|++.++.     +..                 ++.. ...+...++..+..+.+.
T Consensus       105 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  162 (325)
T 3kul_A          105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS-----LDT-----------------FLRTHDGQFTIMQLVGMLRGVGA  162 (325)
T ss_dssp             TTCCCTTBCCEEEEECGGGCCEEEEECCTTCB-----HHH-----------------HHHTTTTCSCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEEeCCccEEEeeCCCCCc-----HHH-----------------HHHhcccCCCHHHHHHHHHHHHH
Confidence            45678888888887766667788888877622     111                 2221 234557777888888999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC-------------------------CCCCccc-e-EEEec-
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~~~~~~~-s-VwsfG-  118 (189)
                      |+.++|..+++|+|+ |+               |++...                         ....++. + ||||| 
T Consensus       163 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  242 (325)
T 3kul_A          163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV  242 (325)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHH
T ss_pred             HHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHH
Confidence            999999999999996 55               222111                         1245788 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                                  |.+.+..++...+..+.+++.|..+|+++.+||.+||+.||++|||+.+|++.|+.+++..+
T Consensus       243 il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          243 VMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             HHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence                        56677888888899998999999999999999999999999999999999999999988643

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.76  E-value=1.9e-18  Score=110.82  Aligned_cols=90  Identities=16%  Similarity=0.162  Sum_probs=74.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEeccCC-ccCC--CCCcC-HhHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRSLFET-QKAG--RTTIH-YPELVE   75 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~~~~g-yl~~--~~~~~-l~~li~   75 (189)
                      ||+++|+|.+|+++|.. ...+|+||||++.+.+ .|+||+++. ..+.|+||+|.+..++ ||..  ...|. |.+||+
T Consensus        17 Wff~~isR~eAE~lL~~-~~~~GaFLVR~Se~~~-~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV~   94 (125)
T 3maz_A           17 ACFYTVSRKEATEMLQK-NPSLGNMILRPGSDSR-NYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVID   94 (125)
T ss_dssp             TTBCCCCHHHHHHHHHH-CGGGCSEEEEECTTSS-SEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHHH
T ss_pred             CCcCCCCHHHHHHHHhc-cCCCCcEEEEeCCCCC-CEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHHH
Confidence            99999999999998853 4568999999998764 899999983 2368999999988434 7763  44688 999999


Q ss_pred             HhhhccCCceeeccCCc
Q psy1684          76 HYSKDADGLCVNLRKPC   92 (189)
Q Consensus        76 ~~~~~a~gl~~~~~~~~   92 (189)
                      ||...++|++..+..+|
T Consensus        95 yY~~~adGl~~~L~~~c  111 (125)
T 3maz_A           95 YFVKETRGNLRPFIAST  111 (125)
T ss_dssp             HHHHHTTTCCCBCCC--
T ss_pred             HHHhCCCcCcccccccc
Confidence            99999999999999887

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.76  E-value=2.1e-20  Score=145.52  Aligned_cols=144  Identities=8%  Similarity=-0.022  Sum_probs=112.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.....+..|||+|++.+ |+    +..                 ++. ...+...++..+..+++.|
T Consensus       203 ~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g-G~----L~~-----------------~i~-~~~l~e~~~~~~~~qil~a  259 (423)
T 4fie_A          203 RDYQHENVVEMYNSYLVGDELWVVMEFLEG-GA----LTD-----------------IVT-HTRMNEEQIAAVCLAVLQA  259 (423)
T ss_dssp             HHCCCTTBCCEEEEEEETTEEEEEEECCTT-EE----HHH-----------------HHH-HSCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCceEEEEEECCEEEEEEeCCCC-Cc----HHH-----------------HHh-ccCCCHHHHHHHHHHHHHH
Confidence            357899999999887777788999999987 42    212                 121 1235566677788889999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.|+|..+|+|||+ |+               |+|+                     |. ....|+. + |||+|     
T Consensus       260 L~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye  339 (423)
T 4fie_A          260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  339 (423)
T ss_dssp             HHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            99999999999996 55               3332                     22 4567999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |.+.+..+++..+..+..  ++.+..+++++.+|+.+||..||++|||++|+++
T Consensus       340 ml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          340 MVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                   788888888888876643  3445679999999999999999999999999986

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.76  E-value=3.9e-18  Score=111.56  Aligned_cols=91  Identities=27%  Similarity=0.389  Sum_probs=79.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEecc-CC--cc--C-CCCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLF-ET--QK--A-GRTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~-~g--yl--~-~~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++.  .+.++||+|.... +|  |+  . +...|. +.+|
T Consensus        28 WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eL  105 (126)
T 2aug_A           28 WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSH--GQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQL  105 (126)
T ss_dssp             TEETTCCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEE--TTEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHH
T ss_pred             cccCCCCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEc--CCeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHH
Confidence            9999999999999998766678999999999888999999999  9999999998763 56  33  3 356788 9999


Q ss_pred             HHHhhhccCCceeeccCCcc
Q psy1684          74 VEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~   93 (189)
                      |++|....+|+.+.+..||.
T Consensus       106 V~~y~~~~~~l~~~L~~P~~  125 (126)
T 2aug_A          106 VEFYQLNKGVLPCKLKHYCA  125 (126)
T ss_dssp             HHHHTTCCTTSSSCCCEECC
T ss_pred             HHHHhhCCCCCceecCCCcC
Confidence            99999999999888888875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.75  E-value=8e-21  Score=142.52  Aligned_cols=144  Identities=10%  Similarity=-0.023  Sum_probs=113.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+|+++++.....++..|||+|++++ |+    +..                 ++.....++..+...+..++..
T Consensus        86 l~~l~HpnIv~l~~~~~~~~~~yivmEy~~g-G~----L~~-----------------~i~~~~~l~e~~~~~~~~qi~~  143 (311)
T 4aw0_A           86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN-GE----LLK-----------------YIRKIGSFDETCTRFYTAEIVS  143 (311)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCTT-EE----HHH-----------------HHHHHSSCCHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCC-CC----HHH-----------------HHHHcCCCCHHHHHHHHHHHHH
Confidence            3568899999988877667778999999887 41    222                 2333345556666778889999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec--
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG--  118 (189)
                      |+.|+|...++|||+ |+               |+|+..                        ....|+. + |||+|  
T Consensus       144 al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvi  223 (311)
T 4aw0_A          144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI  223 (311)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHH
Confidence            999999999999996 66               444321                        3456899 9 99999  


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                                |.+.+..+++..+.++. +.+|..+++++.+|+.+|+..||++|||++|++
T Consensus       224 lyeml~G~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          224 IYQLVAGLPPFRAGNEGLIFAKIIKLE-YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                      78888888998887774 567889999999999999999999999999874

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.75  E-value=1.2e-19  Score=136.74  Aligned_cols=156  Identities=17%  Similarity=0.196  Sum_probs=114.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC---CcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT---TIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~---~~~l~~li~~~~~~a   81 (189)
                      .++|+|++++++.+......+||+|++.++.     +..                 ++....   .+....+..+..+.+
T Consensus        90 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~i~~qi~  147 (309)
T 3p86_A           90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS-----LYR-----------------LLHKSGAREQLDERRRLSMAYDVA  147 (309)
T ss_dssp             HCCCTTBCCEEEEECSTTCCEEEEECCTTCB-----HHH-----------------HHHSTTHHHHSCHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEEECCceEEEEecCCCCc-----HHH-----------------HHhhcCCCCCCCHHHHHHHHHHHH
Confidence            4678888888877766667788888877622     111                 222221   244666777888889


Q ss_pred             CCceeeccCC--cccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKP--CVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~--~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG-  118 (189)
                      .|+.++|...  ++|+|+ |+               |++                     +|. ....++. + ||||| 
T Consensus       148 ~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  227 (309)
T 3p86_A          148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGV  227 (309)
T ss_dssp             HHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHH
T ss_pred             HHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHH
Confidence            9999999998  999996 55               222                     111 3455788 9 99999 


Q ss_pred             -----------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q psy1684         119 -----------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSD  182 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~  182 (189)
                                 |.+.+..++...+. ...+++.|..+|+++.+|+.+||+.||++|||+++|++.|+.+++...|.
T Consensus       228 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          228 ILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             HHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence                       77778877777764 56677889999999999999999999999999999999999999865554

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.75  E-value=4.5e-18  Score=111.80  Aligned_cols=92  Identities=25%  Similarity=0.316  Sum_probs=80.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-----CCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-----RTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-----~~~~~-l~~   72 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++||+|....+|  ++..     ...|. +.+
T Consensus         6 WyhG~isR~eAe~lL~~~~-~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~   82 (128)
T 1ka6_A            6 VYHGKISRETGEKLLLATG-LDGSYLLRDSESVPGVYCLCVLY--HGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKN   82 (128)
T ss_dssp             SBCCSCCHHHHHHHHHHHC-CTTCEEEEECSSSTTCEEEEEES--SSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHH
T ss_pred             ccCCCCCHHHHHHHHhcCC-CCCEEEEeecCCCCCCEEEEEEe--CCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHH
Confidence            9999999999999995433 67999999999888999999999  999999999987777  5552     56788 999


Q ss_pred             HHHHhhhccCCceeeccCCcccc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQV   95 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~~   95 (189)
                      ||+||....+|+...+..||...
T Consensus        83 LV~~y~~~~~gl~~~L~~P~~~~  105 (128)
T 1ka6_A           83 LISAFQKPDQGIVIPLQYPVEKK  105 (128)
T ss_dssp             HHHHTTSSCSSSSSCCCSBCCSS
T ss_pred             HHHHHhhCCCCCcEEcCCcCCCC
Confidence            99999999999999999888653

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.75  E-value=4.1e-18  Score=109.22  Aligned_cols=90  Identities=26%  Similarity=0.434  Sum_probs=77.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec----CCCeeeEEEEEeccCC--ccCCCCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR----SSFCLKMTTGRSLFET--QKAGRTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~----~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|.... .+|+||||++ +.++.|+||++..    ..+.++||+|....+|  ++.+...|. +.+|
T Consensus        13 Wyhg~isR~~Ae~lL~~~~-~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~L   90 (110)
T 2ekx_A           13 WFAGNISRSQSEQLLRQKG-KEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKL   90 (110)
T ss_dssp             SBCCSCCHHHHHHHHHHTC-CTTEEEEEEC-SSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSCHHHH
T ss_pred             eecCCCCHHHHHHHHhccC-CCceEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCCHHHH
Confidence            9999999999999996553 7799999999 5679999999862    1368999999988766  777677888 9999


Q ss_pred             HHHhhhccCCceeeccCCc
Q psy1684          74 VEHYSKDADGLCVNLRKPC   92 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~   92 (189)
                      |+||....+|+.+.+..||
T Consensus        91 V~~y~~~~~~l~~~L~~Pv  109 (110)
T 2ekx_A           91 IHYHQHNSAGMITRLRHPV  109 (110)
T ss_dssp             HHHHHHSCCSSSCCCCEEC
T ss_pred             HHHHeeCCCCCceecCccC
Confidence            9999999999988887775

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.75  E-value=1.5e-17  Score=106.89  Aligned_cols=89  Identities=29%  Similarity=0.334  Sum_probs=76.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCC-CCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAG-RTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~-~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++ +.++.|+||++.  .+.++|++|....+| ++.+ ...|. +.+||+||
T Consensus        12 Wyhg~isR~~Ae~lL~--~~~~G~FLVR~S-~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y   86 (112)
T 1h9o_A           12 WNVGSSNRNKAENLLR--GKRDGTFLVRES-SKQGCYACSVVV--DGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY   86 (112)
T ss_dssp             TBCCSCCHHHHHHHHT--TCCTTEEEEEEC-SSTTCEEEEEEE--TTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHhc--CCCCceEEEeec-CCCCCEEEEEEE--CCEEEEEEEEEcCCceEEeCCCCCcCCHHHHHHHH
Confidence            9999999999999995  458899999999 778999999999  999999999988888 5543 56788 99999999


Q ss_pred             hhc-----cCCceeeccCCccc
Q psy1684          78 SKD-----ADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~-----a~gl~~~~~~~~~~   94 (189)
                      ...     .+|+...+..||..
T Consensus        87 ~~~~l~~~~~gl~~~L~~P~~~  108 (112)
T 1h9o_A           87 QHTSLVQHNDSLNVTLAYPVYA  108 (112)
T ss_dssp             HHSCGGGTCTTCCCCCCEETTC
T ss_pred             hhCcccccCCCcCeeCCCCcCC
Confidence            874     46888888888754

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.74  E-value=4.8e-18  Score=110.37  Aligned_cols=91  Identities=27%  Similarity=0.392  Sum_probs=79.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-----CCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-----RTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-----~~~~~-l~~   72 (189)
                      ||||.|+|.+|+++|... ..+|+||||++.+.+|.|+||++.  .+.++||+|....+|  +|..     ...|. +.+
T Consensus        12 WyhG~isR~eAe~lL~~~-~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~e   88 (119)
T 2ysx_A           12 WNHGNITRSKAEELLSRT-GKDGSFLVRASESISRAYALCVLY--RNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQ   88 (119)
T ss_dssp             SEEESCCHHHHHHHHHHH-CCTTEEEEEECSSCTTSEEEEEEC--SSCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHH
T ss_pred             cccCCCCHHHHHHHHhhc-CCCCEEEEEeCCCCCCCEEEEEEE--CCEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHH
Confidence            999999999999999642 268999999999888999999999  999999999987777  5654     35788 999


Q ss_pred             HHHHhhhccCCceeeccCCccc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~   94 (189)
                      ||+||.....|+...+..||..
T Consensus        89 LV~~y~~~~~~l~~~L~~P~~~  110 (119)
T 2ysx_A           89 LIEFYKKENMGLVTHLQYPVPL  110 (119)
T ss_dssp             HHHHTTSSSSSSSSCCCEECCC
T ss_pred             HHHHHhhCCCCCCeECCCcCCC
Confidence            9999999999999888888865

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.74  E-value=7.7e-20  Score=140.83  Aligned_cols=159  Identities=19%  Similarity=0.242  Sum_probs=119.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......|||+|++.+ |+    +...    +     . ...........+...++..+..+++.|+
T Consensus       130 ~l~hpnIv~~~~~~~~~~~~~lv~e~~~~-g~----L~~~----l-----~-~~~~~~~~~~~~~~~~~~~i~~qi~~aL  194 (367)
T 3l9p_A          130 KFNHQNIVRCIGVSLQSLPRFILLELMAG-GD----LKSF----L-----R-ETRPRPSQPSSLAMLDLLHVARDIACGC  194 (367)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTT-EE----HHHH----H-----H-HHSCCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEecCCCCEEEEEeCCC-CC----HHHH----H-----H-hhccccCccccccHHHHHHHHHHHHHHH
Confidence            46789999988887777778999998876 31    2210    0     0 0000011122355777888888999999


Q ss_pred             eeeccCCcccccc-cccccc-----------------------------------------cC-CCCCccc-e-EEEec-
Q psy1684          85 CVNLRKPCVQVSC-RIYLVH-----------------------------------------GT-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~l~~-----------------------------------------~~-~~~~~~~-s-VwsfG-  118 (189)
                      .++|..+++|+|+ |+.+.-                                         |. ....++. + ||||| 
T Consensus       195 ~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~  274 (367)
T 3l9p_A          195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV  274 (367)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHH
Confidence            9999999999996 552111                                         10 2455888 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |.+.+..++...+..+.+++.|..+|.++.+||.+||+.||++|||+.+|++.|+.+.+.
T Consensus       275 il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          275 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence                        666777888888988988888999999999999999999999999999999999888764

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.74  E-value=1.3e-17  Score=108.50  Aligned_cols=90  Identities=20%  Similarity=0.274  Sum_probs=79.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+||++|.
T Consensus        24 WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV~~y~   99 (122)
T 2lnw_A           24 WFAGNMERQQTDNLLKS--HASGTYLIRERPAEAERFAISIKF--NDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQ   99 (122)
T ss_dssp             TBCCSCCHHHHHHHHHH--SCTTBEEEEECCCSSEEEEEEEEC--SSCEEEEEEEEETTEEESSSSCCBSSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHhcC--CCCCeEEEEeCCCCCCcEEEEEEe--CCcEEEEEEEEcCCEEEECCCCeECCHHHHHHHHh
Confidence            99999999999999964  368999999999888999999999  999999999987666 787778898 999999999


Q ss_pred             hc-----cCCceeeccCCccc
Q psy1684          79 KD-----ADGLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~-----a~gl~~~~~~~~~~   94 (189)
                      ..     .+|+...+..||..
T Consensus       100 ~~~l~~~~~~l~~~L~~P~~~  120 (122)
T 2lnw_A          100 CHSLKESFKQLDTTLKYPYKS  120 (122)
T ss_dssp             HSCGGGTCTTCCCCCCBCSSS
T ss_pred             hCcCcccCCCcCeeeCCcCCC
Confidence            88     67888788877643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.74  E-value=2.6e-19  Score=138.54  Aligned_cols=160  Identities=21%  Similarity=0.269  Sum_probs=121.9

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC----c---cCCCCCcCHhHHHHHhhh
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET----Q---KAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g----y---l~~~~~~~l~~li~~~~~   79 (189)
                      +|+|++++++.+......+||+|++.+ +++.-.+..  .          ...+    +   ......++...+..+..+
T Consensus       133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~--~----------~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  199 (382)
T 3tt0_A          133 KHKNIINLLGACTQDGPLYVIVEYASK-GNLREYLQA--R----------RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ  199 (382)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTT-CBHHHHHHH--T----------CCSSSSSCCCCCSSCCCCCCHHHHHHHHHH
T ss_pred             CCchhhhheeeeccCCceEEEEEecCC-CcHHHHHHH--h----------cccccccccccccccccccCHHHHHHHHHH
Confidence            789999999888777788999999887 322111111  0          0000    0   111234557778888889


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-Vwsf  117 (189)
                      .+.|+.++|..+++|+|+ |+               |++...                        ....++. + ||||
T Consensus       200 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diwsl  279 (382)
T 3tt0_A          200 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF  279 (382)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHH
Confidence            999999999999999996 55               222211                        2445788 9 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      |             |.+.+..++...+..+.+++.|..+++++.+|+.+||+.||++|||+++|++.|+.++...
T Consensus       280 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          280 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             HHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            9             6677788888888999889999999999999999999999999999999999999998764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.74  E-value=9.4e-20  Score=138.66  Aligned_cols=175  Identities=20%  Similarity=0.259  Sum_probs=120.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCC---eeeEEEEEeccCCccCCCCCcCHhHHHHHhhhc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF---CLKMTTGRSLFETQKAGRTTIHYPELVEHYSKD   80 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~---~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~   80 (189)
                      ..++|+|++++++.+...+..+||+|++.. +++.-.+......   ...+..+.......-.....+...++..+..+.
T Consensus       105 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  183 (343)
T 1luf_A          105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAY-GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQV  183 (343)
T ss_dssp             HTCCCTTBCCEEEEECSSSSCEEEEECCTT-CBHHHHHHHTCC----------------------CCCCHHHHHHHHHHH
T ss_pred             HhCCCCCEEEEEEEEccCCceEEEEecCCC-CcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence            357899999999988777889999999887 4321111110000   000000000000001112345577788888899


Q ss_pred             cCCceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCccc-e-EEEec
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGVVV-S-AVDFG  118 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~~~-s-VwsfG  118 (189)
                      +.|+.++|..+++|+|+ |+               +++                       +|. ....++. + |||||
T Consensus       184 ~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  263 (343)
T 1luf_A          184 AAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG  263 (343)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHH
Confidence            99999999999999996 55               111                       111 2356788 9 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                   |.+.+..++...+..+..++.|..+|+++.+|+.+||+.||++|||+.+|++.|+++.+..
T Consensus       264 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          264 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             HHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             HHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence                         5566778888888888888889999999999999999999999999999999999887643

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=8.1e-18  Score=109.13  Aligned_cols=92  Identities=23%  Similarity=0.297  Sum_probs=79.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.... .+|+||||++...+|.|+||++.  .+.++||+|....+| |..+...|. +.+||+||.
T Consensus        18 WyhG~isR~~Ae~lL~~~g-~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LI~~y~   94 (119)
T 2gsb_A           18 WFHGKISKQEAYNLLMTVG-QVCSFLVRPSDNTPGDYSLYFRT--NENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYR   94 (119)
T ss_dssp             SBCCSSCHHHHHHHHHHTC-CSSEEEEEECSSSTTCEEEEEEC--SSCBCCCCEEEETTTEEEESSCCBSCHHHHHHHHT
T ss_pred             cccCCCCHHHHHHHHhhcC-CCCeEEEEeCCCCCCceEEEEEE--CCEEEEEEEEEcCCCCEEECCcccCCHHHHHHHHh
Confidence            9999999999999996543 56999999999888999999999  899999999987777 444456788 999999999


Q ss_pred             hccCCceeeccCCcccc
Q psy1684          79 KDADGLCVNLRKPCVQV   95 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~   95 (189)
                      ....+....+..||...
T Consensus        95 ~~~l~~~~~L~~Pv~~~  111 (119)
T 2gsb_A           95 KEQIVEGYYLKEPVPMQ  111 (119)
T ss_dssp             TSCSBTTBCCCCCCCCC
T ss_pred             hCccCCCCEeCCccCCC
Confidence            98888878888888763

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=1.5e-17  Score=107.72  Aligned_cols=90  Identities=20%  Similarity=0.259  Sum_probs=77.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|...  .+|+||||++...++.|+||++.  .+.++||+|....++ ++.+...|. +.+||+||.
T Consensus        18 WyhG~isR~~Ae~lL~~~--~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV~~y~   93 (118)
T 2dlz_A           18 WFAGNMERQQTDNLLKSH--ASGTYLIRERPAEAERFAISIKF--NDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQ   93 (118)
T ss_dssp             TEEESCCHHHHHHHHHHS--CTTBEEEECCSCSSCCEEEEEEC--SSSEEEEEEEEETTEEESTTSCCBSSHHHHHHHHT
T ss_pred             ceecCCCHHHHHHHhcCC--CCCEEEEEeCCCCCCCEEEEEEE--CCcEEEEEEEEcCCEEEEeCCcccCCHHHHHHHHh
Confidence            999999999999999653  78999999999888999999999  999999999986555 777677898 999999999


Q ss_pred             hccC-----CceeeccCCccc
Q psy1684          79 KDAD-----GLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a~-----gl~~~~~~~~~~   94 (189)
                      ....     |+...+..||..
T Consensus        94 ~~~l~~~~~gl~~~L~~Pv~~  114 (118)
T 2dlz_A           94 CHSLKESFKQLDTTLKYPYSG  114 (118)
T ss_dssp             TSCTTTTCTTCCCCCCBCCSC
T ss_pred             hCcccccCCCcccEeCCcCCC
Confidence            8765     777777777644

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.73  E-value=2.7e-19  Score=131.67  Aligned_cols=153  Identities=18%  Similarity=0.185  Sum_probs=113.2

Q ss_pred             CCCCChHHHHHHhcCCCCC--CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC--CcCHhHHHHHhh
Q psy1684           3 FGKIKRIEAEKKLLLPEND--HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT--TIHYPELVEHYS   78 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~--~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~--~~~l~~li~~~~   78 (189)
                      ...++|+|++++++.+...  ...++|+|++.++.     +..                 ++....  .++...+..+..
T Consensus        61 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~i~~  118 (271)
T 3kmu_A           61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS-----LYN-----------------VLHEGTNFVVDQSQAVKFAL  118 (271)
T ss_dssp             GCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCB-----HHH-----------------HHHSCSSCCCCHHHHHHHHH
T ss_pred             HHhcCCCchhheEEEEccCCCCCeEeeecccCCCc-----HHH-----------------HHhhcccCCCCHHHHHHHHH
Confidence            3466788888888766554  45678888877522     222                 233222  345777788888


Q ss_pred             hccCCceeeccCC--cccccc-cc-------------------------------cccccC----CCCCccc-e-EEEec
Q psy1684          79 KDADGLCVNLRKP--CVQVSC-RI-------------------------------YLVHGT----NLSGVVV-S-AVDFG  118 (189)
Q Consensus        79 ~~a~gl~~~~~~~--~~~~~~-p~-------------------------------~l~~~~----~~~~~~~-s-VwsfG  118 (189)
                      +.+.|+.++|...  ++|+|+ |+                               ++|+|.    ....++. + |||||
T Consensus       119 qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG  198 (271)
T 3kmu_A          119 DMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA  198 (271)
T ss_dssp             HHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence            9999999999988  999996 54                               112221    1234567 8 99999


Q ss_pred             ------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                  |.+.+..++...+ ..+.+++.|..+|+++.+++.+||+.||++|||++++++.|+.+.+
T Consensus       199 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                        6777777766565 5677888899999999999999999999999999999999988753

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.73  E-value=2.3e-17  Score=105.61  Aligned_cols=90  Identities=27%  Similarity=0.383  Sum_probs=74.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCc-cCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQ-KAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gy-l~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....+.| +.+...|. +.+||+||.
T Consensus         9 Wyhg~isr~~Ae~lL~~~~-~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~   85 (109)
T 3tkz_A            9 WFHPNITGVEAENLLLTRG-VDGSFLARPSKSNPGDFTLSVRR--NGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYM   85 (109)
T ss_dssp             SBCTTCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHH
T ss_pred             ceecCCCHHHHHHHHhcCC-CCCEEEEEecCCCCCCEEEEEEE--CCEEEEEEEEeCCCEEEecCCcccCCHHHHHHHHH
Confidence            9999999999999996433 68999999999888999999999  9999999998753324 66677898 999999999


Q ss_pred             hcc------CCceeeccCCcc
Q psy1684          79 KDA------DGLCVNLRKPCV   93 (189)
Q Consensus        79 ~~a------~gl~~~~~~~~~   93 (189)
                      ..+      +|+...+..||.
T Consensus        86 ~~~~~l~~~~gl~~~L~~Pv~  106 (109)
T 3tkz_A           86 EHHGQLKEKNGDVIELKYPLN  106 (109)
T ss_dssp             HSTTSEEETTSCBCCCCEECC
T ss_pred             hCcCccccCCCceEECCCccc
Confidence            876      455566666654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=4.1e-19  Score=135.02  Aligned_cols=153  Identities=18%  Similarity=0.307  Sum_probs=116.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......+||+|++.+ +    ++..                 ++.. ...+...++..+..+.+.|
T Consensus       102 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~a  159 (333)
T 1mqb_A          102 QFSHHNIIRLEGVISKYKPMMIITEYMEN-G----ALDK-----------------FLREKDGEFSVLQLVGMLRGIAAG  159 (333)
T ss_dssp             TCCCTTBCCEEEEECSSSSEEEEEECCTT-E----EHHH-----------------HHHHTTTCSCHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcEEEEEecCCCcEEEEeCCCC-C----cHHH-----------------HHHhCCCCCCHHHHHHHHHHHHHH
Confidence            46777888877776666667778877765 2    1211                 2221 2345567778888888999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc------------------------cC-CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH------------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~------------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      +.++|..+++|+|+ |+               +++.                        |. ....++. + |||||  
T Consensus       160 L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  239 (333)
T 1mqb_A          160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV  239 (333)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             HHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHH
Confidence            99999999999996 54               1111                        11 2356788 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                 |.+.+..++...+..+.+++.|..+|.++.+|+.+||+.||++||++.+|++.|+.+++..
T Consensus       240 l~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          240 MWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence                       5566778888888889888889999999999999999999999999999999999988753

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=109.53  Aligned_cols=92  Identities=26%  Similarity=0.435  Sum_probs=79.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec----CCCeeeEEEEEeccCC--ccCCCCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR----SSFCLKMTTGRSLFET--QKAGRTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~----~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|.... .+|+||||++ +.+|.|+||++..    ..+.++||+|....+|  ++.+...|. +.+|
T Consensus        13 WyhG~isR~eAe~lL~~~g-~~G~FLVR~S-s~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eL   90 (125)
T 2ge9_A           13 WYSKHMTRSQAEQLLKQEG-KEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPEL   90 (125)
T ss_dssp             SEETTCCHHHHHHHHHHHT-CTTEEEEEEC-SSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSSHHHH
T ss_pred             ccccCCCHHHHHHHHhhcC-CCceEEEEec-CCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHH
Confidence            9999999999999996543 6799999999 5679999999962    1368999999988777  777777898 9999


Q ss_pred             HHHhhhccCCceeeccCCccc
Q psy1684          74 VEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~~   94 (189)
                      |++|....+|+...+..||..
T Consensus        91 V~~y~~~~~~l~~~L~~P~~~  111 (125)
T 2ge9_A           91 INYHQHNSAGLISRLKYPVSQ  111 (125)
T ss_dssp             HHHHHCCCTTCSCCSSEECCS
T ss_pred             HHHhhhCCCCCceeCCCccCC
Confidence            999999999999999888865

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.73  E-value=2.7e-17  Score=108.35  Aligned_cols=88  Identities=27%  Similarity=0.260  Sum_probs=78.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCC---------------CeeeEEEEEeccCC-cc--
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---------------FCLKMTTGRSLFET-QK--   62 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~---------------~~v~h~~i~~~~~g-yl--   62 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++.+.+|.|+||++.  .               +.++||+|....+| +|  
T Consensus        22 Wyhg~isR~eAe~lL~~--~~~G~FLVR~S~s~~g~y~LSv~~--~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g~~l~g   97 (131)
T 2kno_A           22 WYKPHLSRDQAIALLKD--KDPGAFLIRDSHSFQGAYGLALKV--ATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKG   97 (131)
T ss_dssp             HBCTTCCHHHHHHHHTT--SCTTBEEEEECSSSTTEEEEEEEC--SCCSSSSSSCCSCHHHHHEEEEEEECCSSCCCEET
T ss_pred             ceecCCCHHHHHHHhcC--CCCCeEEEecCCCCCCCEEEEEEe--CCCCcccccccccccCCceEEEEEEECCCCCEEec
Confidence            99999999999999953  478999999999888999999998  4               38999999988888 77  


Q ss_pred             -CCCCCcC-HhHHHHHhhhccCCceeeccCCc
Q psy1684          63 -AGRTTIH-YPELVEHYSKDADGLCVNLRKPC   92 (189)
Q Consensus        63 -~~~~~~~-l~~li~~~~~~a~gl~~~~~~~~   92 (189)
                       .....|. +.+||++|.....|+.+.+..|+
T Consensus        98 ~~~~~~F~SL~eLV~~y~~~~~~L~~~L~~P~  129 (131)
T 2kno_A           98 CPSEPYFGSLSALVSQHSISPISLPCCLRIPS  129 (131)
T ss_dssp             CSSCCCCCSHHHHHHTTTTCCSSCSSCCBCSS
T ss_pred             CCCCCccCCHHHHHHHHhhCCCCCCeECCCcC
Confidence             4566788 99999999999999998888776

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.72  E-value=1.6e-19  Score=133.93  Aligned_cols=152  Identities=24%  Similarity=0.394  Sum_probs=111.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++... .+..|+|+|++.. +    ++..                 ++... ..++...+..+..+.+.|
T Consensus        72 ~l~h~~iv~~~~~~~-~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~~~~qi~~~  128 (281)
T 1mp8_A           72 QFDHPHIVKLIGVIT-ENPVWIIMELCTL-G----ELRS-----------------FLQVRKYSLDLASLILYAYQLSTA  128 (281)
T ss_dssp             TCCCTTBCCEEEEEC-SSSCEEEEECCTT-E----EHHH-----------------HHHHTTTTSCHHHHHHHHHHHHHH
T ss_pred             hCCCCccceEEEEEc-cCccEEEEecCCC-C----CHHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            456777777776542 3456777776654 2    1111                 23222 235567777788889999


Q ss_pred             ceeeccCCcccccc-cc---------------ccccc----------------------C-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHG----------------------T-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~----------------------~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               +++..                      . ....++. + |||||    
T Consensus       129 l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  208 (281)
T 1mp8_A          129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW  208 (281)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             HHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHH
Confidence            99999999999996 55               22211                      1 2356788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                               |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.+|++.|+.+++..
T Consensus       209 ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          209 EILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence                     5556667788888888888899999999999999999999999999999999999998753

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=1.2e-17  Score=109.34  Aligned_cols=93  Identities=29%  Similarity=0.413  Sum_probs=79.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecC----CCeeeEEEEEeccCC--ccCCCCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRS----SFCLKMTTGRSLFET--QKAGRTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~----~~~v~h~~i~~~~~g--yl~~~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|.... .+|+||||++ +.++.|+||++...    .+.++||+|....+|  ++.+...|. +.+|
T Consensus        18 WyhG~isR~eAe~lL~~~~-~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eL   95 (125)
T 2dm0_A           18 WYHRNITRNQAEHLLRQES-KEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPEL   95 (125)
T ss_dssp             SBCCSCCHHHHHHHHHHHC-STTCBCEEEE-TTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSSHHHH
T ss_pred             cccCCCCHHHHHHHHhhcC-CCCEEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCCHHHH
Confidence            9999999999999996443 6799999999 56799999999721    358999999988777  777677888 9999


Q ss_pred             HHHhhhccCCceeeccCCcccc
Q psy1684          74 VEHYSKDADGLCVNLRKPCVQV   95 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~~~   95 (189)
                      |+||....+|+...+..||...
T Consensus        96 V~~y~~~~~~l~~~L~~P~~~~  117 (125)
T 2dm0_A           96 IWYHQHNAAGLMTRLRYPVGLM  117 (125)
T ss_dssp             HHHHTTCCCSSSCCCCSBCCSS
T ss_pred             HHHhhhCCCCCccCCCCccCCC
Confidence            9999999999999999988764

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.72  E-value=4.2e-17  Score=106.02  Aligned_cols=90  Identities=30%  Similarity=0.426  Sum_probs=77.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCC-CCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESR-KNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~-~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++.+. ++.|+||++.  .+.++|++|....++ ++.+...|. +.+||+||
T Consensus        13 WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~~g~y~LSv~~--~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI~~y   88 (120)
T 2iug_A           13 WYWGDISREEVNEKLRD--TADGTFLVRDASTKMHGDYTLTLRK--GGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHY   88 (120)
T ss_dssp             TBCCSCCHHHHHHHHTT--CCTTEEEEEECSSGGGCSEEEEEEE--TTEEEEEEEEEETTEEESSSSCCBSSHHHHHHHH
T ss_pred             ccccCCCHHHHHHHhcC--CCCcEEEEECCCCCCCCcEEEEEEE--CCEEEEEEEEEcCCEEEECCCCccCCHHHHHHHH
Confidence            99999999999999953  57899999999987 7999999999  999999999987444 677777888 99999999


Q ss_pred             hhccC-----CceeeccCCccc
Q psy1684          78 SKDAD-----GLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~-----gl~~~~~~~~~~   94 (189)
                      .....     |+...+..||.+
T Consensus        89 ~~~~~~~~~~~l~~~L~~Pv~r  110 (120)
T 2iug_A           89 RNESLAQYNPKLDVKLLYPVSK  110 (120)
T ss_dssp             HHSCGGGTCGGGCCCCCEECCT
T ss_pred             HhCccccccCCcceeeCCcCCc
Confidence            98864     577778878765

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.71  E-value=4.1e-19  Score=132.41  Aligned_cols=118  Identities=26%  Similarity=0.453  Sum_probs=95.3

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------  105 (189)
                      ++.....++...+..+..+.+.|+.++|..+++|+|+ |+               +++...                   
T Consensus       107 ~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y  186 (291)
T 1xbb_A          107 YLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW  186 (291)
T ss_dssp             HHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGG
T ss_pred             HHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCcee
Confidence            4443444566777788888999999999999999996 55               221110                   


Q ss_pred             ------CCCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC
Q psy1684         106 ------NLSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT  164 (189)
Q Consensus       106 ------~~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~  164 (189)
                            ....++. + |||||             |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||
T Consensus       187 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  266 (291)
T 1xbb_A          187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG  266 (291)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             eChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence                  1234678 8 99999             5666778888888888888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhh
Q psy1684         165 FETLQWKLEDFFTM  178 (189)
Q Consensus       165 ~~~i~~~l~~~~~~  178 (189)
                      +.+|++.|++++..
T Consensus       267 ~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          267 FAAVELRLRNYYYD  280 (291)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999875

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.71  E-value=7e-17  Score=111.91  Aligned_cols=93  Identities=41%  Similarity=0.692  Sum_probs=82.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||++.+..|.|+||++..   ..+.++||+|....+|  |+.....|. +.+||
T Consensus        76 w~~g~isr~~ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV  155 (175)
T 4d8k_A           76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV  155 (175)
T ss_dssp             TBCSSCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHHHH
T ss_pred             eecCcccHHHHHHHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHHHH
Confidence            99999999999999977666799999999998889999999862   2468999999987777  777777898 99999


Q ss_pred             HHhhhccCCceeeccCCcc
Q psy1684          75 EHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~   93 (189)
                      +||...++|+.+.+..||.
T Consensus       156 ~~y~~~~~gl~~~L~~Pc~  174 (175)
T 4d8k_A          156 RHYTNASDGLCTRLSRPCQ  174 (175)
T ss_dssp             HHHHHCCTTSSSCCCSBCC
T ss_pred             HHHhhCCCCCcccCCCcCC
Confidence            9999999999999999885

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=1.5e-18  Score=129.56  Aligned_cols=153  Identities=19%  Similarity=0.277  Sum_probs=115.0

Q ss_pred             CCChHHHHHHhcCCCCCCCc-EEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGA-FLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~-fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+...++. ++|.++...+.     +..                 ++.. ...+....+..+..+.+.
T Consensus        78 ~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~i~~qi~~  135 (298)
T 3pls_A           78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGD-----LLQ-----------------FIRSPQRNPTVKDLISFGLQVAR  135 (298)
T ss_dssp             TCCCTTBCCCCEEECCSSSCCEEEECCCTTCB-----HHH-----------------HHHCTTCCCBHHHHHHHHHHHHH
T ss_pred             hCCCCCeeeEEEEEecCCCCcEEEEecccCCC-----HHH-----------------HHhccccCCCHHHHHHHHHHHHH
Confidence            46677777777766555454 77777766522     111                 2322 223446777788888999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC--------------------------CCCCccc-e-EEEec
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------------NLSGVVV-S-AVDFG  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------------~~~~~~~-s-VwsfG  118 (189)
                      |+.++|..+++|+|+ |+               +++...                          ....++. + |||||
T Consensus       136 ~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  215 (298)
T 3pls_A          136 GMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFG  215 (298)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHH
Confidence            999999999999996 54               222211                          3446788 9 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                   |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||.+|||++++++.|+++++..
T Consensus       216 ~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          216 VLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             HHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence                         5566677788888888888889999999999999999999999999999999999998864

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=4.4e-17  Score=104.48  Aligned_cols=86  Identities=31%  Similarity=0.497  Sum_probs=73.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++ +...|. +.+||+||
T Consensus        21 Wyhg~isR~~Ae~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l-~~~~F~sl~~LV~~y   95 (111)
T 2eo3_A           21 WYMGPVSRQEAQTRLQ--GQRHGMFLVRDSSTCPGDYVLSVSE--NSRVSHYIINSLPNRRFKI-GDQEFDHLPALLEFY   95 (111)
T ss_dssp             HEEESCCHHHHHHHHS--SCCTTCEEEEECSSSSSCEEEEEEE--TTEEEEEEEEEETTTEEEE-TTCCBSSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHhc--CCCCceEEEEeecCCCCCEEEEEEe--CCeEEEEEEEEcCCCCEEE-CCcccCCHHHHHHHH
Confidence            9999999999999994  4578999999999888999999999  999999999986667  55 467888 99999999


Q ss_pred             hhccCCceeeccCCc
Q psy1684          78 SKDADGLCVNLRKPC   92 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~   92 (189)
                      .....+ ...+..||
T Consensus        96 ~~~~l~-~~~L~~Pv  109 (111)
T 2eo3_A           96 KIHYLD-TTTLIEPA  109 (111)
T ss_dssp             TTSCSS-SSCCCCBC
T ss_pred             hhCCCC-CccCCCcC
Confidence            988765 34555555

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.71  E-value=2.8e-19  Score=134.43  Aligned_cols=173  Identities=17%  Similarity=0.215  Sum_probs=119.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEE-eccCC-cc--CCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGR-SLFET-QK--AGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~-~~~~g-yl--~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+......++|+|++.+ +.+.-.+... ...-..+.-. ..... .+  .....+...++..+..+
T Consensus        81 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  158 (314)
T 2ivs_A           81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKY-GSLRGFLRES-RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ  158 (314)
T ss_dssp             TTCCCTTBCCEEEEECSSSSCEEEEECCTT-CBHHHHHHHT-TTSTTEEC----------------CEECHHHHHHHHHH
T ss_pred             hhCCCCceeeEEEEEecCCceEEEEeecCC-CCHHHHHHHH-hhccCCcccccccccccccccccccCcCHHHHHHHHHH
Confidence            467899999999888777788999999886 3221001110 0000000000 00000 00  01223446777888889


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-Vwsf  117 (189)
                      .+.|+.++|..+++|+|+ |+               +++...                        ....++. + |||+
T Consensus       159 i~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  238 (314)
T 2ivs_A          159 ISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF  238 (314)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHH
Confidence            999999999999999996 55               222111                        1234688 8 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      |             |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.+|++.|+.++..
T Consensus       239 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          239 GVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            9             556667778888888888888999999999999999999999999999999999998863

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.71  E-value=6e-19  Score=130.66  Aligned_cols=120  Identities=33%  Similarity=0.600  Sum_probs=93.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-----------------------CC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NL  107 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~  107 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               +++...                       ..
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  184 (279)
T 1qpc_A          105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY  184 (279)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhcc
Confidence            3456777888888999999999999999996 55               111110                       12


Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      +.++. + |||||             |.+.+..++...+..+.++..|..+|.++.+|+.+||+.||++|||+.+|++.|
T Consensus       185 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  264 (279)
T 1qpc_A          185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL  264 (279)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence            45788 8 99999             566677888888888888888999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCC
Q psy1684         173 EDFFTMEGSDYKEA  186 (189)
Q Consensus       173 ~~~~~~~~~~~~~~  186 (189)
                      +.++......|++.
T Consensus       265 ~~~~~~~~~~~~~~  278 (279)
T 1qpc_A          265 EDFFTATEGQYQPQ  278 (279)
T ss_dssp             HHHHHHC-------
T ss_pred             HHHHHhccCCCCCC
Confidence            99999887777653

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.71  E-value=8.3e-17  Score=106.94  Aligned_cols=90  Identities=24%  Similarity=0.384  Sum_probs=78.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++...++.|+||++.  .+.++||+|. ..+|  +|.+...|. +.+||+||
T Consensus        28 WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~-~~~g~~~l~~~~~F~sl~eLV~~y  102 (138)
T 2crh_A           28 WYAGPMERAGAESILAN--RSDGTFLVRQRVKDAAEFAISIKY--NVEVKHIKIM-TAEGLYRITEKKAFRGLTELVEFY  102 (138)
T ss_dssp             SBCCSCCHHHHHHHTTT--SCTTEEEEECCSSTTCCCEEEEEE--TTEEEEEECE-EETTEEESSTTCCBSSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHhcC--CCCCEEEEEECCCCCCCEEEEEEE--CCeEEEEEEE-eCCCEEEECCCCccCCHHHHHHHH
Confidence            99999999999999954  478999999999888999999999  9999999996 5556  677677898 99999999


Q ss_pred             hhcc-----CCceeeccCCcccc
Q psy1684          78 SKDA-----DGLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~a-----~gl~~~~~~~~~~~   95 (189)
                      ....     +|+...+..||...
T Consensus       103 ~~~~l~~~~~~l~~~L~~Pv~~~  125 (138)
T 2crh_A          103 QQNSLKDCFKSLDTTLQFPFKEP  125 (138)
T ss_dssp             TTSCGGGTCTTCCCCCCEESSCC
T ss_pred             HhCccccccCCcCcccCCccCCC
Confidence            9887     57888888887653

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.71  E-value=4.9e-17  Score=103.08  Aligned_cols=87  Identities=25%  Similarity=0.315  Sum_probs=73.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.    .+|+||||++.+.+|.|+||++.  .+.++|++|. ..+| |..+...|. +.+||+||.
T Consensus         9 Wyhg~isR~~Ae~lL~----~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~-~~~g~~~~~~~~F~sl~~LI~~y~   81 (104)
T 1mil_A            9 WFHGKLSRREAEALLQ----LNGDFLVRESTTTPGQYVLTGLQ--SGQPKHLLLV-DPEGVVRTKDHRFESVSHLISYHM   81 (104)
T ss_dssp             TBCSSCCHHHHHTTCC----STTEEEEEECCSSCSSEEEEEEE--TTEEEEEEEB-CTTSSEECSSCEESSHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHhc----cCCcEEEEeCCCCCCCEEEEEEE--CCEEEEEEEE-eCCCEEEECCceeCCHHHHHHHHh
Confidence            9999999999999984    58999999999888999999999  9999999996 4556 555567888 999999999


Q ss_pred             hccC-----CceeeccCCccc
Q psy1684          79 KDAD-----GLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a~-----gl~~~~~~~~~~   94 (189)
                      ....     |+...+..||..
T Consensus        82 ~~~~p~~~~g~~~~L~~Pv~r  102 (104)
T 1mil_A           82 DNHLPIISAGSELCLQQPVER  102 (104)
T ss_dssp             HHTCCEEETTEEECCCEECCC
T ss_pred             hCCCccccCCceEEeCccCCC
Confidence            8753     666677777643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.71  E-value=1.2e-18  Score=128.42  Aligned_cols=152  Identities=17%  Similarity=0.211  Sum_probs=114.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......++|+|+++.+.     +..                 ++.. ...++...+..+..+.+.|
T Consensus        61 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~~i~~~  118 (269)
T 4hcu_A           61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGC-----LSD-----------------YLRTQRGLFAAETLLGMCLDVCEG  118 (269)
T ss_dssp             TCCCTTBCCEEEEECSSSSEEEEEECCTTCB-----HHH-----------------HHHTTTTCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEecCCceEEEEEeCCCCc-----HHH-----------------HHHhcCcccCHHHHHHHHHHHHHH
Confidence            4667777777776666666677777766521     111                 2322 2235567777778888899


Q ss_pred             ceeeccCCcccccc-cc---------------ccccc----------------------C-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHG----------------------T-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~----------------------~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               +++..                      . ....++. + |||+|    
T Consensus       119 l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  198 (269)
T 4hcu_A          119 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW  198 (269)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHH
Confidence            99999999999996 54               22211                      1 2356788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                               |.+.+..++...+..+.++..|..+++++.+|+.+||+.||++|||++++++.|+.+.++
T Consensus       199 ~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          199 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                     566677888888888888888999999999999999999999999999999999998763

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.70  E-value=9.8e-17  Score=117.41  Aligned_cols=90  Identities=28%  Similarity=0.344  Sum_probs=82.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++ +.+|.|+||++.  .+.++|++|....+|  ++.+...|. +.+||+||
T Consensus       161 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y  237 (254)
T 2oq1_A          161 WYHSSLTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIY--GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL  237 (254)
T ss_dssp             TBCSSCCHHHHHHHHHSSCCCTTEEEEEEC-SSTTEEEEEEEE--TTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEE--CCeEEEEEEEEcCCCCEEECCCceECCHHHHHHHH
Confidence            999999999999999776668999999999 778999999999  999999999987777  676678898 99999999


Q ss_pred             hhccCCceeeccCCcc
Q psy1684          78 SKDADGLCVNLRKPCV   93 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~   93 (189)
                      ....+|+.+.+..||.
T Consensus       238 ~~~~~~l~~~L~~p~~  253 (254)
T 2oq1_A          238 KLKADGLIYCLKEACP  253 (254)
T ss_dssp             HHCCTTSSSCCCSBCC
T ss_pred             HhCCCCCCeeCCccCc
Confidence            9999999999888875

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.70  E-value=6.6e-17  Score=105.59  Aligned_cols=90  Identities=28%  Similarity=0.315  Sum_probs=75.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCc-cCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQ-KAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gy-l~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.... .+|+||||++. .++.|+||++.  .+.++|++|....+.| +.....|. +.+||+||.
T Consensus        21 WyhG~isR~eAe~lL~~~~-~~G~FLVR~S~-~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~   96 (124)
T 2eob_A           21 WYYDRLSRGEAEDMLMRIP-RDGAFLIRKRE-GTDSYAITFRA--RGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYE   96 (124)
T ss_dssp             TEESSCCHHHHHHHHHHCC-SSSEEEEECCT-TSSCEEEEEEE--TTEEEEEEEEESSSCEESSSSCCBSSHHHHHHHHT
T ss_pred             CeecCCCHHHHHHHHhcCC-CCCEEEEEecC-CCCCEEEEEEe--CCeEEEEEEEECCCEEEECCCCcCCCHHHHHHHHh
Confidence            9999999999999996442 57999999999 77999999999  9999999998753334 55455588 999999999


Q ss_pred             hccCCceeeccCCccc
Q psy1684          79 KDADGLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~   94 (189)
                      ....++...+..||..
T Consensus        97 ~~~~~~~~~L~~P~~~  112 (124)
T 2eob_A           97 KHALYRKMRLRYPVTP  112 (124)
T ss_dssp             TSCSSSSCCSCEECCH
T ss_pred             hCCCCCCcCCCCcCCc
Confidence            9988888888877754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.70  E-value=9.5e-19  Score=132.92  Aligned_cols=166  Identities=21%  Similarity=0.271  Sum_probs=117.6

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++++++.+......+||+|+..+ +.+.-.+... ..+....+.+..      .....+...++..+..+.+.|+.
T Consensus        99 ~hp~iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~qi~~aL~  171 (334)
T 2pvf_A           99 KHKNIINLLGACTQDGPLYVIVEYASK-GNLREYLRARRPPGMEYSYDINR------VPEEQMTFKDLVSCTYQLARGME  171 (334)
T ss_dssp             CCTTBCCEEEEECSSSCCEEEEECCTT-CBHHHHHHTTSCTTCCSCC--------------CCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCEeeEEEEEccCCceEEEEECCCC-CcHHHHHHHhccccccccccccc------cccccCCHHHHHHHHHHHHHHHH
Confidence            688888888887777788999998876 3221001000 000000000000      00123446777888889999999


Q ss_pred             eeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |+               +++...                        ....++. + |||||     
T Consensus       172 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  251 (334)
T 2pvf_A          172 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  251 (334)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHH
Confidence            999999999996 54               222111                        1244788 8 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                              |.+.+..++...+..+.+++.|..+|.++.+|+.+||+.||++|||+.+|++.|+.+++..
T Consensus       252 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          252 IFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                    5667778888888888888889999999999999999999999999999999999998864

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=3.7e-17  Score=105.80  Aligned_cols=88  Identities=15%  Similarity=0.126  Sum_probs=74.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec--CCCeeeEEEEEeccCC-ccCCCCCc--C-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR--SSFCLKMTTGRSLFET-QKAGRTTI--H-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~--~~~~v~h~~i~~~~~g-yl~~~~~~--~-l~~li   74 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++..  ..+.++||+|....++ ++.....|  . +.+||
T Consensus        23 WyhG~isR~eAe~lL~~~~-~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~g~~~i~~~~~F~~~sL~eLV  101 (118)
T 2el8_A           23 SCFLKVSRLEAQLLLERYP-ECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVV  101 (118)
T ss_dssp             TTCCCCCHHHHHHHHHHSS-TTCSBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCCBTTBCCBSSSSCCCCSSHHHHH
T ss_pred             ceecCCCHHHHHHHHhhCC-CCcEEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEEcCCEEEEeCCCeECCCCHHHHH
Confidence            9999999999999996544 789999999998889999999873  1368999999884434 77767788  7 99999


Q ss_pred             HHhhhccCCceeecc
Q psy1684          75 EHYSKDADGLCVNLR   89 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~   89 (189)
                      +||...+.|++..+.
T Consensus       102 ~~y~~~~~gl~~~L~  116 (118)
T 2el8_A          102 NYFVSHTKKALVPFL  116 (118)
T ss_dssp             HHHHHHSSSCCCBCC
T ss_pred             HHHhhCCCCCeEeee
Confidence            999999999886553

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.70  E-value=2.4e-19  Score=135.91  Aligned_cols=111  Identities=24%  Similarity=0.378  Sum_probs=91.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~  106 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |+               |+++                       |. .
T Consensus       113 ~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3poz_A          113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhc
Confidence            4556777788889999999999999999996 55               2111                       11 2


Q ss_pred             CCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       107 ~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ...++. + |||||             |.+.+..++...+..+.+++.|..++.++.+|+.+||+.||++|||+.+|++.
T Consensus       193 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            355788 9 99999             56666777888888888888999999999999999999999999999999999


Q ss_pred             HHHHHh
Q psy1684         172 LEDFFT  177 (189)
Q Consensus       172 l~~~~~  177 (189)
                      |+.+..
T Consensus       273 l~~~~~  278 (327)
T 3poz_A          273 FSKMAR  278 (327)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            998875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.70  E-value=1.1e-18  Score=143.44  Aligned_cols=151  Identities=23%  Similarity=0.384  Sum_probs=117.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+. .+..|||+|++.. |+    +..                 ++.. ...+....++.+..+.+.|
T Consensus       447 ~l~HpnIv~l~~~~~-~~~~~lv~E~~~~-g~----L~~-----------------~l~~~~~~l~~~~~~~i~~qi~~a  503 (656)
T 2j0j_A          447 QFDHPHIVKLIGVIT-ENPVWIIMELCTL-GE----LRS-----------------FLQVRKFSLDLASLILYAYQLSTA  503 (656)
T ss_dssp             HCCCTTBCCEEEEEC-SSSCEEEEECCTT-CB----HHH-----------------HHHHTTTTCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEe-cCceEEEEEcCCC-Cc----HHH-----------------HHHhccCCCCHHHHHHHHHHHHHH
Confidence            467888888887763 4567888888775 31    111                 2221 1234467777888899999


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               |+++..                       ....++. + |||||    
T Consensus       504 L~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~  583 (656)
T 2j0j_A          504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW  583 (656)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHH
Confidence            99999999999996 55               322211                       2345888 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                               |.+.+..++...+..+.+++.|..+|+++.+||.+||+.||++|||+.+|++.|+.+++.
T Consensus       584 ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          584 EILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence                     666777888888989999999999999999999999999999999999999999999864

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.70  E-value=7.1e-17  Score=107.38  Aligned_cols=92  Identities=29%  Similarity=0.436  Sum_probs=78.4

Q ss_pred             CCCCCC-ChHHHHHHhcCC----CCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEecc-CC----ccCCCCCcC-
Q psy1684           1 WYFGKI-KRIEAEKKLLLP----ENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLF-ET----QKAGRTTIH-   69 (189)
Q Consensus         1 w~~g~l-~~~n~~~lL~~~----~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~-~g----yl~~~~~~~-   69 (189)
                      ||||.| +|.+|+++|...    ...+|+||||++...+|.|+||++.  .+.++||+|.... +|    |+.+...|. 
T Consensus        24 WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~gg~~~~~l~~~~~F~s  101 (138)
T 2dx0_A           24 WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR--SGRVQHCRIRSTMENGVMKYYLTDNLTFNS  101 (138)
T ss_dssp             TBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEEEEETTEEEEESSTTSCBSS
T ss_pred             cccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEE--CCeEEEEEEEEecCCCceEEEeCCCCcCCC
Confidence            999999 899999999642    4578999999999888999999999  9999999998764 33    777778899 


Q ss_pred             HhHHHHHhhhcc---CCceeeccCCccc
Q psy1684          70 YPELVEHYSKDA---DGLCVNLRKPCVQ   94 (189)
Q Consensus        70 l~~li~~~~~~a---~gl~~~~~~~~~~   94 (189)
                      +.+||+||....   .|+...+..||.+
T Consensus       102 l~eLI~~y~~~~l~~~gl~~~L~~Pv~~  129 (138)
T 2dx0_A          102 IYALIQHYREAHLRCAEFELRLTDPVPN  129 (138)
T ss_dssp             HHHHHHHTTTSCCCCGGGSSCCCCBCC-
T ss_pred             HHHHHHHHhhCCCCCCCcccccCccCCC
Confidence            999999999886   4778888888754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.70  E-value=1.4e-18  Score=128.90  Aligned_cols=152  Identities=18%  Similarity=0.239  Sum_probs=115.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......++|+|++..+.     +..                 ++.. ...+....+..+..+.+.|
T Consensus        75 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~~  132 (283)
T 3gen_A           75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGC-----LLN-----------------YLREMRHRFQTQQLLEMCKDVCEA  132 (283)
T ss_dssp             TCCCTTBCCEEEEECSSSSEEEEECCCTTCB-----HHH-----------------HHHCGGGCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEeeEEEEEecCCCeEEEEeccCCCc-----HHH-----------------HHHHhccCCCHHHHHHHHHHHHHH
Confidence            4567777777776666666777777776521     111                 2222 2335567777788888999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc----------------------cC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH----------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~----------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               +++.                      |. ....++. + |||+|    
T Consensus       133 l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~  212 (283)
T 3gen_A          133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW  212 (283)
T ss_dssp             HHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHH
Confidence            99999999999996 54               2221                      11 2355788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                               |.+.+..+....+..+.+...|..+|+++.+|+.+||+.||++|||++++++.|+.++..
T Consensus       213 ~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          213 EIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence                     556677788888888888888999999999999999999999999999999999998864

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.70  E-value=1.5e-16  Score=103.14  Aligned_cols=89  Identities=28%  Similarity=0.329  Sum_probs=75.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-CCCcC-HhHHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-RTTIH-YPELVEH   76 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-~~~~~-l~~li~~   76 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++...++ |+||++.  .+.++|++|....+|  ++.+ ...|. +.+||+|
T Consensus        18 WyhG~isR~~Ae~lL~--~~~~G~FLVR~S~~~~~-y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~~   92 (119)
T 2cs0_A           18 WFHGAISREDAENLLE--SQPLGSFLIRVSHSHVG-YTLSYKA--QSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTF   92 (119)
T ss_dssp             SBCSSCCHHHHHHHHH--TSCTTCEEEEECSSSSS-EEEEECC--SSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHH
T ss_pred             ccccCCCHHHHHHHhc--CCCCCEEEEEecCCCCC-EEEEEEE--CCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHHH
Confidence            9999999999999994  45789999999998877 9999999  899999999988776  5653 56788 9999999


Q ss_pred             hhhccCC-ceeeccCCccc
Q psy1684          77 YSKDADG-LCVNLRKPCVQ   94 (189)
Q Consensus        77 ~~~~a~g-l~~~~~~~~~~   94 (189)
                      |.....+ ....+..||..
T Consensus        93 y~~~~l~~~~~~L~~P~~~  111 (119)
T 2cs0_A           93 HQQKPIEPRRELLTQPCRQ  111 (119)
T ss_dssp             HTTSCCSSCCCCCCSBCCC
T ss_pred             HhhCcCCCCCCEeCccCCC
Confidence            9988754 34667777765

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=1.1e-18  Score=129.78  Aligned_cols=119  Identities=27%  Similarity=0.460  Sum_probs=97.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------  105 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               +++...                         
T Consensus       106 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (287)
T 1u59_A          106 EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI  185 (287)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHh
Confidence            4557777888889999999999999999996 55               222111                         


Q ss_pred             CCCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 NLSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ....++. + |||||             |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++||++.++++
T Consensus       186 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  265 (287)
T 1u59_A          186 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  265 (287)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            1245788 8 99999             5556677888888889889999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCC
Q psy1684         171 KLEDFFTMEGSDYKE  185 (189)
Q Consensus       171 ~l~~~~~~~~~~~~~  185 (189)
                      .|+.++.+....+..
T Consensus       266 ~l~~~~~~~~~~~~~  280 (287)
T 1u59_A          266 RMRACYYSLASKVEG  280 (287)
T ss_dssp             HHHHHHHHHHTTCSS
T ss_pred             HHHHHHHhcCCcccC
Confidence            999999987666554

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.69  E-value=1.3e-16  Score=99.62  Aligned_cols=78  Identities=32%  Similarity=0.331  Sum_probs=68.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++. ...|. +.+||+||
T Consensus         5 Wyhg~isR~~Ae~lL~~~~-~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LV~~y   80 (96)
T 1jyr_A            5 WFFGKIPRAKAEEMLSKQR-HDGAFLIRESESAPGDFSLSVKF--GNDVQHFKVLRDGAGKYFLW-VVKFNSLNELVDYH   80 (96)
T ss_dssp             TBCCSCCHHHHHHHHHTCC-STTBEEEEECSSSTTCEEEEEEE--TTEEEEEECEECTTSCEESS-SCEESSHHHHHHHT
T ss_pred             eeccCCCHHHHHHHHhcCC-CCcEEEEEecCCCCCCEEEEEEe--CCeEEEEEEEEcCCCCEEEC-CcccCCHHHHHHHH
Confidence            9999999999999997654 38999999999888999999999  999999999987667  555 47788 99999999


Q ss_pred             hhccC
Q psy1684          78 SKDAD   82 (189)
Q Consensus        78 ~~~a~   82 (189)
                      .....
T Consensus        81 ~~~~l   85 (96)
T 1jyr_A           81 RSTSV   85 (96)
T ss_dssp             TSSCS
T ss_pred             hhCCC
Confidence            87753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.69  E-value=5.2e-20  Score=137.99  Aligned_cols=99  Identities=14%  Similarity=0.028  Sum_probs=72.4

Q ss_pred             HHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------------
Q psy1684          72 ELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------------  105 (189)
Q Consensus        72 ~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------------  105 (189)
                      ....+..+++.|+.|+|+.+++|||+ |+               |+|+..                              
T Consensus       119 ~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmA  198 (299)
T 4g31_A          119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS  198 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccC
Confidence            35567789999999999999999996 66               444321                              


Q ss_pred             ----CCCCccc-e-EEEec-------CCCCChH---HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         106 ----NLSGVVV-S-AVDFG-------SGGMTNA---EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       106 ----~~~~~~~-s-VwsfG-------~~~~~~~---~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                          .+..|+. + |||+|       ++-.+..   ..+..+.++..++.+...+++..+|+.+||+.||++|||+.||+
T Consensus       199 PE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil  278 (299)
T 4g31_A          199 PEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII  278 (299)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence                4567999 9 99999       4333332   33344455554444455667888999999999999999999998


Q ss_pred             H
Q psy1684         170 W  170 (189)
Q Consensus       170 ~  170 (189)
                      +
T Consensus       279 ~  279 (299)
T 4g31_A          279 E  279 (299)
T ss_dssp             T
T ss_pred             c
Confidence            6

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.69  E-value=1.3e-16  Score=116.82  Aligned_cols=93  Identities=34%  Similarity=0.502  Sum_probs=84.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|++.+|+++|......+|+||||++.+.+|.|+||++.  .+.++||+|....+|  ++.+...|. +.+||+||
T Consensus         8 Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y   85 (254)
T 2oq1_A            8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH--DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFY   85 (254)
T ss_dssp             TBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEE--CCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHHHH
Confidence            9999999999999997656688999999999988999999999  999999999986666  777778899 99999999


Q ss_pred             hhccCCceeeccCCcccc
Q psy1684          78 SKDADGLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~   95 (189)
                      ....+|+...+..||...
T Consensus        86 ~~~~~~l~~~L~~p~~~~  103 (254)
T 2oq1_A           86 SRDPDGLPCNLRKPCNRP  103 (254)
T ss_dssp             HHCCTTSSSCCCSBCCCC
T ss_pred             HhCCCCcccccccccCCC
Confidence            999999999999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.69  E-value=2.4e-18  Score=131.69  Aligned_cols=111  Identities=24%  Similarity=0.433  Sum_probs=89.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~  107 (189)
                      ++...+..+..+.+.|+.++|..+++|+|+ |+               |++...                        ..
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  269 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  269 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC
Confidence            446677788889999999999999999996 54               332211                        24


Q ss_pred             CCccc-e-EEEec-------------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||             |.+.+ ...+...+..+.+++.|..+++++.+|+.+||+.||++|||+++|++.
T Consensus       270 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          270 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            56788 9 99999             33333 345666677888888899999999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy1684         172 LEDFFTM  178 (189)
Q Consensus       172 l~~~~~~  178 (189)
                      |+.++++
T Consensus       350 L~~~~~~  356 (359)
T 3vhe_A          350 LGNLLQA  356 (359)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.69  E-value=1.1e-16  Score=117.06  Aligned_cols=91  Identities=31%  Similarity=0.439  Sum_probs=82.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++ +.+|.|+||++.  .+.++|++|....+|  ++.+...|. +.+||+||
T Consensus       160 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y  236 (254)
T 1a81_A          160 WFHGKISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLH--EGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY  236 (254)
T ss_dssp             TEEEECCHHHHHHHHHSSCCCTTCEEEEEC-SSSSCEEEEEEE--TTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEE--CCEEEEEEEEEcCCCCEEecCCcccCCHHHHHHHH
Confidence            999999999999999776668999999999 778999999999  999999999987777  676678898 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ....+|+...+..||.+
T Consensus       237 ~~~~~~l~~~L~~p~~r  253 (254)
T 1a81_A          237 SYKADGLLRVLTVPCQK  253 (254)
T ss_dssp             TTCCTTSSSCCCCBCCC
T ss_pred             HHCCCCCCeecCCcCCC
Confidence            99999999999888864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.69  E-value=3.2e-18  Score=127.84  Aligned_cols=154  Identities=17%  Similarity=0.221  Sum_probs=113.9

Q ss_pred             CCChHHHHHHhcCCCC-CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPEN-DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~-~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+.. ....++|+|++.++.     +..                 ++.. ...+...++..+..+.+.
T Consensus        82 ~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~ql~~  139 (298)
T 3f66_A           82 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD-----LRN-----------------FIRNETHNPTVKDLIGFGLQVAK  139 (298)
T ss_dssp             TCCCTTBCCCCEEECCSSSCCEEEEECCTTCB-----HHH-----------------HHHCTTCCCCHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeeeeEEEcCCCceEEEEeCCCCCC-----HHH-----------------HHHhcccCCCHHHHHHHHHHHHH
Confidence            4677788777775332 334577777776522     111                 2322 223446777788888999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC--------------------------CCCCccc-e-EEEec
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------------NLSGVVV-S-AVDFG  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------------~~~~~~~-s-VwsfG  118 (189)
                      |+.++|..+++|+|+ |+               |++...                          ....++. + |||+|
T Consensus       140 ~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  219 (298)
T 3f66_A          140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG  219 (298)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHH
Confidence            999999999999996 55               222211                          2345788 9 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                                   |.+.+..++...+..+.+...|..+|.++.+++.+||+.||++|||++++++.|+.+++.-.
T Consensus       220 ~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          220 VLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence                         55566667777788888888899999999999999999999999999999999999988543

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.69  E-value=1.2e-16  Score=102.97  Aligned_cols=87  Identities=29%  Similarity=0.453  Sum_probs=73.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.    .+|+||||++.+.+|.|+||++.  .+.++||+|.. .+| |..+...|. +.+||++|.
T Consensus        19 WyhG~isR~eAe~lL~----~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~-~~g~y~~~~~~F~sl~eLV~~y~   91 (116)
T 2kk6_A           19 WYHGAIPRIEAQELLK----KQGDFLVRESHGKPGEYVLSVYS--DGQRRHFIIQY-VDNMYRFEGTGFSNIPQLIDHHY   91 (116)
T ss_dssp             TEEESCCHHHHHHTCC----STTCEEEEECTTCTTCEEEEEEE--TTEEEEEEEEE-ETTEEESSSCEESCHHHHHHHHH
T ss_pred             CccCCCCHHHHHHHhc----cCCcEEEEECCCCCCcEEEEEEE--CCeEEEEEEEe-cCCEEEECCCEeCCHHHHHHHHh
Confidence            9999999999999984    57999999999888999999999  99999999996 455 544567888 999999999


Q ss_pred             hccC----CceeeccCCccc
Q psy1684          79 KDAD----GLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a~----gl~~~~~~~~~~   94 (189)
                      ....    +....+..||.+
T Consensus        92 ~~~~~i~~~~~~~L~~Pv~r  111 (116)
T 2kk6_A           92 TTKQVITKKSGVVLLNPIPK  111 (116)
T ss_dssp             HTTCCSCTTTTCCCCSCCCC
T ss_pred             hCCCCccCCCCCeECcccCC
Confidence            8765    345566677654

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.69  E-value=1.4e-16  Score=116.58  Aligned_cols=93  Identities=28%  Similarity=0.346  Sum_probs=84.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|++.+|+++|......+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++.+...|. +.+||+||
T Consensus         7 Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv~~y   84 (254)
T 1a81_A            7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAH--GRKAHHYTIERELNGTYAIAGGRTHASPADLCHYH   84 (254)
T ss_dssp             TBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEE--CCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHHHHH
Confidence            9999999999999997666688999999999988999999999  999999999986666  777778898 99999999


Q ss_pred             hhccCCceeeccCCcccc
Q psy1684          78 SKDADGLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~   95 (189)
                      ....+|+...+..||...
T Consensus        85 ~~~~~~l~~~L~~p~~~~  102 (254)
T 1a81_A           85 SQESDGLVCLLKKPFNRP  102 (254)
T ss_dssp             TTCCTTSSSCCCEECCCC
T ss_pred             HhCCCCceECCccccCCC
Confidence            999999999999888764

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.69  E-value=1.8e-16  Score=99.70  Aligned_cols=78  Identities=23%  Similarity=0.265  Sum_probs=68.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|...  .+|+||||++.+.+|.|+||++.  .+.++|++|....+|  ++. ...|. +.+|+++|
T Consensus        11 Wyhg~isR~~Ae~lL~~~--~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LV~~y   85 (100)
T 1r1p_A           11 WFHEGLSRHQAENLLMGK--DIGFFIIRASQSSPGDFSISVRH--EDDVQHFKVMRDTKGNYFLW-TEKFPSLNKLVDYY   85 (100)
T ss_dssp             TSCTTCCHHHHHHHHHTS--CTTBEEEEECSSSTTCEEEEEEC--SSSEEEEECEECTTCCEESS-SCEESSHHHHHHHH
T ss_pred             ccccCCCHHHHHHHhcCC--CCCEEEEEecCCCCCCEEEEEEE--CCEEEEEEEEEcCCCCEEEe-CCEeCCHHHHHHHH
Confidence            999999999999999654  68999999999888999999999  999999999987667  555 46888 99999999


Q ss_pred             hhccCC
Q psy1684          78 SKDADG   83 (189)
Q Consensus        78 ~~~a~g   83 (189)
                      .....+
T Consensus        86 ~~~~l~   91 (100)
T 1r1p_A           86 RTTSIS   91 (100)
T ss_dssp             TTSCSS
T ss_pred             HhCCCC
Confidence            987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.69  E-value=4.1e-19  Score=134.51  Aligned_cols=151  Identities=19%  Similarity=0.227  Sum_probs=112.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+. ....++|++++..+.     +..                 ++.. ...+....+..+..+.+.|
T Consensus        71 ~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~qi~~~  127 (325)
T 3kex_A           71 SLDHAHIVRLLGLCP-GSSLQLVTQYLPLGS-----LLD-----------------HVRQHRGALGPQLLLNWGVQIAKG  127 (325)
T ss_dssp             TCCCTTBCCEEEEEC-BSSEEEEEECCTTCB-----SHH-----------------HHHSSGGGSCTTHHHHHHHHHHHH
T ss_pred             cCCCCCcCeEEEEEc-CCccEEEEEeCCCCC-----HHH-----------------HHHHccccCCHHHHHHHHHHHHHH
Confidence            456777777776553 345667777766522     111                 2222 1234456677777888999


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |+               |+++..                        ..+.++. + |||||   
T Consensus       128 l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  207 (325)
T 3kex_A          128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV  207 (325)
T ss_dssp             HHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHH
Confidence            99999999999996 55               333211                        2256788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                |.+.+..++...+..+.+++.|..++.++.+|+.+||+.||++|||++++++.|+.+...
T Consensus       208 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          208 WELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             HHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                      556666788888888888889999999999999999999999999999999999988753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.69  E-value=2.5e-18  Score=129.39  Aligned_cols=113  Identities=27%  Similarity=0.427  Sum_probs=92.8

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------  105 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |+               +++...                        
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  221 (313)
T 3brb_A          142 KHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL  221 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhh
Confidence            34557778888889999999999999999996 55               222111                        


Q ss_pred             CCCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 NLSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ....++. + |||||             |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.+|++
T Consensus       222 ~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  301 (313)
T 3brb_A          222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL  301 (313)
T ss_dssp             HSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             cCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            2345788 9 99999             5556667777888888888889999999999999999999999999999999


Q ss_pred             HHHHHHhh
Q psy1684         171 KLEDFFTM  178 (189)
Q Consensus       171 ~l~~~~~~  178 (189)
                      .|+.+++.
T Consensus       302 ~L~~l~~~  309 (313)
T 3brb_A          302 QLEKLLES  309 (313)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99999874

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.68  E-value=2.8e-18  Score=126.15  Aligned_cols=152  Identities=17%  Similarity=0.217  Sum_probs=114.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......++|+|+.+.+.     +..                 ++.. ...++...+..+..+.+.|
T Consensus        59 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~~~~~~i~~~  116 (267)
T 3t9t_A           59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGC-----LSD-----------------YLRTQRGLFAAETLLGMCLDVCEG  116 (267)
T ss_dssp             TCCCTTBCCEEEEECSSSSCEEEECCCTTCB-----HHH-----------------HHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEccCCCeEEEEeCCCCCc-----HHH-----------------HHhhCcccCCHHHHHHHHHHHHHH
Confidence            4678888888777766667788888776522     111                 2221 1234566677778888899


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               +++...                       ....++. + |||+|    
T Consensus       117 l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  196 (267)
T 3t9t_A          117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW  196 (267)
T ss_dssp             HHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHH
Confidence            99999999999996 54               222111                       2255788 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                               |.+.+..++...+..+.++..|..+|.++.+|+.+||+.||++|||++++++.|+.+.++
T Consensus       197 ~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          197 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                     555667788888888888888899999999999999999999999999999999998763

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.68  E-value=3.1e-16  Score=101.29  Aligned_cols=78  Identities=32%  Similarity=0.339  Sum_probs=68.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.. ...+|+||||++.+.+|.|+||++.  .+.++|++|.+..+|  ++. ...|. +.+||++|
T Consensus         8 WyhG~isR~eAe~lL~~-~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~-~~~F~sl~eLV~~y   83 (117)
T 3ov1_A            8 WFFGKIPRAKAEEMLSK-QRHDGAFLIRESESAPGDFSLSVKF--GNDVQHFKVLRDGAGKYFLW-VVKFNSLNELVDYH   83 (117)
T ss_dssp             TBCCSCCHHHHHHHHHT-CCSTTBEEEEECSSSTTCEEEEEEE--TTEEEEEECEECTTSCEESS-SCEESSHHHHHHHT
T ss_pred             cccCCCCHHHHHHHHhC-CCCCCcEEEEeCCCCCCCEEEEEec--CCceEEEEEEECCCCeEEEC-CCCcCCHHHHHHHH
Confidence            99999999999999976 3468999999999888999999999  999999999987777  555 47888 99999999


Q ss_pred             hhccC
Q psy1684          78 SKDAD   82 (189)
Q Consensus        78 ~~~a~   82 (189)
                      .....
T Consensus        84 ~~~~l   88 (117)
T 3ov1_A           84 RSTSV   88 (117)
T ss_dssp             TTSCS
T ss_pred             hhCCC
Confidence            98754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.68  E-value=4.3e-19  Score=132.47  Aligned_cols=152  Identities=20%  Similarity=0.237  Sum_probs=106.2

Q ss_pred             CCChHHHHHHhcCCCCC--CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPEND--HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~--~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a   81 (189)
                      .++|+|++++++.+...  ...+||+|++..+.     +..                 ++... ..++...+..+..+.+
T Consensus        67 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~qi~  124 (295)
T 3ugc_A           67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-----LRD-----------------YLQKHKERIDHIKLLQYTSQIC  124 (295)
T ss_dssp             TCCCTTBCCEEEEECHHHHTSCEEEEECCTTCB-----HHH-----------------HHHHCGGGCCHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEecCCCCceEEEEEeCCCCC-----HHH-----------------HHHhcccccCHHHHHHHHHHHH
Confidence            45677777776654322  23577777766522     111                 22222 2355667777888899


Q ss_pred             CCceeeccCCcccccc-cc---------------cccc------------------------cC-CCCCccc-e-EEEec
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVH------------------------GT-NLSGVVV-S-AVDFG  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~------------------------~~-~~~~~~~-s-VwsfG  118 (189)
                      .|+.++|..+++|+|+ |+               +++.                        |. ....++. + |||||
T Consensus       125 ~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  204 (295)
T 3ugc_A          125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFG  204 (295)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHH
Confidence            9999999999999996 54               2221                        11 2355788 9 99999


Q ss_pred             ------CCC----CC------------------hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGG----MT------------------NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~----~~------------------~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            +.+    ..                  ...+...+..+.+++.|..+|+++.+||.+||+.||++|||+++|++
T Consensus       205 ~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          205 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                  111    00                  11345556778888899999999999999999999999999999999


Q ss_pred             HHHHHHhh
Q psy1684         171 KLEDFFTM  178 (189)
Q Consensus       171 ~l~~~~~~  178 (189)
                      .|+.+.+.
T Consensus       285 ~L~~l~~~  292 (295)
T 3ugc_A          285 RVDQIRDN  292 (295)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99998764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.67  E-value=1.1e-17  Score=125.76  Aligned_cols=150  Identities=15%  Similarity=0.196  Sum_probs=110.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC---CcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT---TIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~---~~~l~~li~~~~~~a   81 (189)
                      .++|+|++++++.+.  +..+||+|++.++.     +..                 ++....   .+....++.+..+.+
T Consensus        57 ~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~~qi~  112 (307)
T 2eva_A           57 RVNHPNIVKLYGACL--NPVCLVMEYAEGGS-----LYN-----------------VLHGAEPLPYYTAAHAMSWCLQCS  112 (307)
T ss_dssp             HCCCTTBCCEEEBCT--TTTEEEEECCTTCB-----HHH-----------------HHHCSSSEECCCHHHHHHHHHHHH
T ss_pred             cCCCCCcCeEEEEEc--CCcEEEEEcCCCCC-----HHH-----------------HHhccCCCCccCHHHHHHHHHHHH
Confidence            467899999888765  35789999887632     111                 122111   233566677778888


Q ss_pred             CCceeecc---CCcccccc-cc----------------ccc------------------ccC-CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLR---KPCVQVSC-RI----------------YLV------------------HGT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~---~~~~~~~~-p~----------------~l~------------------~~~-~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|.   .+++|+|+ |+                +++                  +|. ....++. + |||||  
T Consensus       113 ~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  192 (307)
T 2eva_A          113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII  192 (307)
T ss_dssp             HHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHH
Confidence            89999998   78999986 54                111                  111 3456888 9 99999  


Q ss_pred             ----------CCCC--ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----------SGGM--TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----------~~~~--~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                |.+.  ...++...+..+.+++.+..+|.++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       193 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          193 LWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             HHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             HHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence                      4433  23455566777888888899999999999999999999999999999999988764

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.67  E-value=3.5e-16  Score=104.45  Aligned_cols=86  Identities=30%  Similarity=0.294  Sum_probs=73.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccC---CCCCcC-HhHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKA---GRTTIH-YPELVE   75 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~---~~~~~~-l~~li~   75 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++...++.|+||++.  .+.++|++|....++ ++.   ....|. +.+||+
T Consensus        26 WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~~~~~LSv~~--~~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI~  101 (141)
T 2vif_A           26 WYWGPITRWEAEGKLAN--VPDGSFLVRDSSDDRYLLSLSFRS--HGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIE  101 (141)
T ss_dssp             CBCCSCCHHHHHHHTTT--SCTTCEEEEECSSTTCSEEEEEEE--TTEEEEEEEEEETTEEEETTCCSCCCBSSHHHHHH
T ss_pred             CcccCCCHHHHHHHhcC--CCCceEEEEecCCCCCCEEEEEEE--CCEEEEEEEEEECCEEEEeecCCCCccCCHHHHHH
Confidence            99999999999999954  468999999999888999999999  999999999987444 676   477888 999999


Q ss_pred             Hhhhcc-CCceeeccC
Q psy1684          76 HYSKDA-DGLCVNLRK   90 (189)
Q Consensus        76 ~~~~~a-~gl~~~~~~   90 (189)
                      ||.... +|+.+.+..
T Consensus       102 ~y~~~~~~gl~c~l~~  117 (141)
T 2vif_A          102 HSIGDSENGAFCYSRS  117 (141)
T ss_dssp             HHHHHHHHTCCEEESC
T ss_pred             HHhhCCCCCcceeccc
Confidence            999888 587655443

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.67  E-value=1.1e-16  Score=102.59  Aligned_cols=82  Identities=22%  Similarity=0.321  Sum_probs=70.7

Q ss_pred             CCCCCCChHHHHHHhcCCC-CCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPE-NDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~-~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.... ..+|+||||++.+.+|.|+||++.  .+.++|++|....+| |..+...|. +.+||+||
T Consensus        11 WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y   88 (111)
T 2hdv_A           11 WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNF--QGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHF   88 (111)
T ss_dssp             TEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEE--TTEEEEEEEEECTTCCEEETTEEESSHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEe--CCeEEEEEEEEcCCCCEEeCCceeCCHHHHHHHH
Confidence            9999999999999997654 278999999999888999999999  999999999987777 433467788 99999999


Q ss_pred             hhccCCc
Q psy1684          78 SKDADGL   84 (189)
Q Consensus        78 ~~~a~gl   84 (189)
                      ......+
T Consensus        89 ~~~~l~~   95 (111)
T 2hdv_A           89 RVHPIPL   95 (111)
T ss_dssp             TTSCCC-
T ss_pred             hhCCccc
Confidence            9877654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.67  E-value=1.5e-18  Score=131.17  Aligned_cols=112  Identities=28%  Similarity=0.451  Sum_probs=91.6

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------CC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NL  107 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~  107 (189)
                      ++...+..+..+.+.|+.++|..+++|+|+ |+               |++...                        ..
T Consensus       134 ~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (323)
T 3qup_A          134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD  213 (323)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcC
Confidence            446777788889999999999999999996 55               222111                        23


Q ss_pred             CCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKL  172 (189)
Q Consensus       108 ~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l  172 (189)
                      ..++. + |||||             |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.++++.|
T Consensus       214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  293 (323)
T 3qup_A          214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMEL  293 (323)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            45788 9 99999             566677788888888888888999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy1684         173 EDFFTME  179 (189)
Q Consensus       173 ~~~~~~~  179 (189)
                      ++++...
T Consensus       294 ~~~l~~~  300 (323)
T 3qup_A          294 ENILGHL  300 (323)
T ss_dssp             HHHHHC-
T ss_pred             HHHHHHh
Confidence            9998753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.67  E-value=4.7e-18  Score=128.71  Aligned_cols=159  Identities=19%  Similarity=0.234  Sum_probs=116.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+......|||+|++.+ +    ++...    +     . ...........+...++..+..+.+.|+
T Consensus        89 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~----~L~~~----l-----~-~~~~~~~~~~~~~~~~~~~i~~qi~~al  153 (327)
T 2yfx_A           89 KFNHQNIVRCIGVSLQSLPRFILMELMAG-G----DLKSF----L-----R-ETRPRPSQPSSLAMLDLLHVARDIACGC  153 (327)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTT-E----EHHHH----H-----H-HTSCCSSSTTSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEcCCCCcEEEEecCCC-C----cHHHH----H-----H-hhcccccccccccHHHHHHHHHHHHHHH
Confidence            45788888888877766777888888765 3    12220    0     0 0000001112344677788888999999


Q ss_pred             eeeccCCcccccc-ccccccc-----------------------------------------C-CCCCccc-e-EEEec-
Q psy1684          85 CVNLRKPCVQVSC-RIYLVHG-----------------------------------------T-NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~l~~~-----------------------------------------~-~~~~~~~-s-VwsfG-  118 (189)
                      .++|..+++|+|+ |+.+.-.                                         . ....++. + ||||| 
T Consensus       154 ~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  233 (327)
T 2yfx_A          154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV  233 (327)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHH
Confidence            9999999999996 5511110                                         0 2355788 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |.+.+..++...+..+.++..|..+|.++.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus       234 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          234 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence                        555667788888888888888999999999999999999999999999999999887663

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.67  E-value=2.5e-16  Score=100.63  Aligned_cols=87  Identities=30%  Similarity=0.458  Sum_probs=71.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccC-----------------C-cc
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFE-----------------T-QK   62 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~-----------------g-yl   62 (189)
                      ||||.|++.+|+++|.  ...+|+||||++.+.+|.|+||++.  .+.++|++|.....                 + |.
T Consensus         2 Wyhg~isr~~Ae~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~   77 (109)
T 1ju5_A            2 WYWGRLSRQEAVALLQ--GQRHGVFLVRDSSTSPGDYVLSVSE--NSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLR   77 (109)
T ss_dssp             CEETTCCHHHHHHHHT--TCCTTEEEEEECSSSTTEEEEEEEC--SSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEE
T ss_pred             ccccCCCHHHHHHHhc--CCCCCEEEEEecCCCCCCEEEEEEE--CCeEEEEEEEECCCCcccccccccccccccccEEE
Confidence            9999999999999994  3578999999999888999999999  99999999987653                 4 43


Q ss_pred             CCCCCcC-HhHHHHHhhhccCCceeeccCCc
Q psy1684          63 AGRTTIH-YPELVEHYSKDADGLCVNLRKPC   92 (189)
Q Consensus        63 ~~~~~~~-l~~li~~~~~~a~gl~~~~~~~~   92 (189)
                      .+...|. +.+||+||.....+. ..+..||
T Consensus        78 l~~~~F~sl~~LV~~y~~~~l~~-~~L~~Pv  107 (109)
T 1ju5_A           78 IGDQEFDSLPALLEFYKIHYLDT-TTLIEPV  107 (109)
T ss_dssp             ETTEEESSHHHHHHHHHHSCSSS-SCCCEES
T ss_pred             eCCcccCCHHHHHHHHhhCCCCC-eecCccC
Confidence            3566788 999999999876542 2344444

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.67  E-value=2.9e-18  Score=129.84  Aligned_cols=150  Identities=23%  Similarity=0.347  Sum_probs=112.6

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC----------------CCCcCH
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG----------------RTTIHY   70 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~----------------~~~~~l   70 (189)
                      .|+|++++++.+......|||+|+++.+.     +..                 ++..                ...+..
T Consensus        84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~~~~~~~  141 (327)
T 1fvr_A           84 HHPNIINLLGACEHRGYLYLAIEYAPHGN-----LLD-----------------FLRKSRVLETDPAFAIANSTASTLSS  141 (327)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCB-----HHH-----------------HHHTTCHHHHCHHHHHHTTBSCSSCH
T ss_pred             CCCchhhhceeeeeCCceEEEEecCCCCC-----HHH-----------------HHHhcccccccccccccccccccCCH
Confidence            57777777766555555677777766522     111                 2211                123556


Q ss_pred             hHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC---------------------CCCCccc-
Q psy1684          71 PELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT---------------------NLSGVVV-  112 (189)
Q Consensus        71 ~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~---------------------~~~~~~~-  112 (189)
                      ..+..+..+.+.|+.++|..+++|+|+ |+               +++...                     ....++. 
T Consensus       142 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  221 (327)
T 1fvr_A          142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN  221 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCch
Confidence            777888889999999999999999996 55               222111                     2234688 


Q ss_pred             e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         113 S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       113 s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      + |||+|             |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.++++.|+.+++.
T Consensus       222 ~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          222 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             hcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            8 99999             556667788888888888888999999999999999999999999999999999999874

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.67  E-value=1.5e-16  Score=106.12  Aligned_cols=83  Identities=28%  Similarity=0.334  Sum_probs=70.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCC--CCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-----CCCcC-H
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSES--RKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-----RTTIH-Y   70 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~--~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-----~~~~~-l   70 (189)
                      ||||.|+|.+|+++|... ..+|+||||++..  .++.|+||++.  .+.++|++|.+..+|  |..+     ...|. +
T Consensus        25 WyhG~isR~eAe~lL~~~-~~~G~FLVR~S~~~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl  101 (141)
T 2eo6_A           25 WYAGACDRKSAEEALHRS-NKDGSFLIRKSSGHDSKQPYTLVAFF--NKRVYNIPVRFIEATKQYALGKKKNGEEYFGSV  101 (141)
T ss_dssp             SEEESCCHHHHHHHHHHH-CCTTCBCEEECSTTCSSCSEEEEEEE--TTEEEEEEECEETTTTEECSSSCCTTCCCBSSH
T ss_pred             eEecCCCHHHHHHHhhcc-CCCceEEEEECCCCCCCCCEEEEEEE--CCEEEEEEEEEeCCCCEEEEccccCCCCccCCH
Confidence            999999999999999532 2589999999986  67999999999  999999999875555  4433     46788 9


Q ss_pred             hHHHHHhhhccCCcee
Q psy1684          71 PELVEHYSKDADGLCV   86 (189)
Q Consensus        71 ~~li~~~~~~a~gl~~   86 (189)
                      .+||+||.....+++.
T Consensus       102 ~eLV~~y~~~~~~l~~  117 (141)
T 2eo6_A          102 VEIVNSHQHNPLVLID  117 (141)
T ss_dssp             HHHHHHHHHSCCCCCC
T ss_pred             HHHHHHHhhCCcccee
Confidence            9999999999988843

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.66  E-value=1.4e-16  Score=100.60  Aligned_cols=77  Identities=38%  Similarity=0.470  Sum_probs=65.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++. ...|. +.+||+||.
T Consensus         7 Wyhg~isR~~Ae~lL~~~~-~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~g~~~l~-~~~F~sl~~LV~~y~   82 (102)
T 2cia_A            7 WYYGNVTRHQAECALNERG-VEGDFLIRDSESSPSDFSVSLKA--SGKNKHFKVQLVDNVYCIG-QRRFHTMDELVEHYK   82 (102)
T ss_dssp             TBCCSCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEECC--SSSCEEEEEEEETTEEEET-TEEESSHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHhhCC-CCcEEEEEECCCCCCCEEEEEEe--CCeeEEEEEEecCCEEEEC-CcCcCCHHHHHHHHh
Confidence            9999999999999994332 67999999999888999999999  999999999954333 555 46788 999999998


Q ss_pred             hcc
Q psy1684          79 KDA   81 (189)
Q Consensus        79 ~~a   81 (189)
                      ...
T Consensus        83 ~~~   85 (102)
T 2cia_A           83 KAP   85 (102)
T ss_dssp             HSC
T ss_pred             hCc
Confidence            764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.66  E-value=1.7e-18  Score=128.19  Aligned_cols=153  Identities=22%  Similarity=0.347  Sum_probs=109.9

Q ss_pred             CCCChHHHHHHhcCCCCC-CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC--CcCHhHHHHHhhhc
Q psy1684           4 GKIKRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT--TIHYPELVEHYSKD   80 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~-~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~--~~~l~~li~~~~~~   80 (189)
                      ..++|+|++++++.+... ...++|+|+... +    ++..                 ++....  .++...+..+..+.
T Consensus        69 ~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~~~~~~i  126 (278)
T 1byg_A           69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK-G----SLVD-----------------YLRSRGRSVLGGDCLLKFSLDV  126 (278)
T ss_dssp             TTCCCTTBCCEEEEECCC--CCEEEECCCTT-E----EHHH-----------------HHHHHHHHHCCHHHHHHHHHHH
T ss_pred             HhCCCCCEeeEEEEEEcCCCceEEEEecCCC-C----CHHH-----------------HHHhcccccCCHHHHHHHHHHH
Confidence            356777877777754333 356777777665 2    1211                 221111  13355667777888


Q ss_pred             cCCceeeccCCcccccc-cc---------------cccc------------------cC-CCCCccc-e-EEEec-----
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI---------------YLVH------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~---------------~l~~------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.|+.++|..+++|+|+ |+               +++.                  |. ....++. + |||||     
T Consensus       127 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  206 (278)
T 1byg_A          127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE  206 (278)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHH
Confidence            89999999999999996 55               1111                  11 2345788 9 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                              |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.++++.|+.+...
T Consensus       207 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          207 IYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence                    455556777788888888888999999999999999999999999999999999998763

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=4.4e-18  Score=129.61  Aligned_cols=172  Identities=17%  Similarity=0.157  Sum_probs=112.7

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC---ccCCCCCcCHhHHHHHhhhccCC
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET---QKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g---yl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      .|+|++++++.+...+..|||+|++.. +++.-.+... ......-.+......   --.....++...+..+..+.+.|
T Consensus       107 ~hp~iv~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  184 (344)
T 1rjb_A          107 SHENIVNLLGACTLSGPIYLIFEYCCY-GDLLNYLRSK-REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKG  184 (344)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTT-CBHHHHHHTT-TTCC---------------------CCHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEeeCCccEEEEecCCC-CcHHHHHhhc-cccccccccchhhhcccccccccccCCHHHHHHHHHHHHHH
Confidence            789999999888777788999999876 3221111110 000000000000000   00011234467778888899999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|+|+ |+               |++.                       |. ....++. + |||||   
T Consensus       185 L~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  264 (344)
T 1rjb_A          185 MEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL  264 (344)
T ss_dssp             HHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHH
Confidence            99999999999996 55               2221                       11 2356888 9 99999   


Q ss_pred             ----------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 ----------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 ----------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                                |.+.+. ..+...+..+.+++.|..+|+++.+|+.+||+.||++|||+.+|++.|+.++....
T Consensus       265 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          265 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             HHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence                      334433 34555567788888899999999999999999999999999999999999887643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.66  E-value=2.5e-18  Score=130.44  Aligned_cols=112  Identities=24%  Similarity=0.335  Sum_probs=91.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~  106 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |+               |++...                        .
T Consensus       113 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3lzb_A          113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHc
Confidence            4556777788889999999999999999996 55               222111                        2


Q ss_pred             CCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       107 ~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ...++. + |||||             |.+.+..++...+..+.+++.|..+|.++.+|+.+||+.||.+|||+.+|++.
T Consensus       193 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            345788 9 99999             56666777888888888889999999999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy1684         172 LEDFFTM  178 (189)
Q Consensus       172 l~~~~~~  178 (189)
                      |+.+...
T Consensus       273 L~~~~~~  279 (327)
T 3lzb_A          273 FSKMARD  279 (327)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHhC
Confidence            9988753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.66  E-value=1.3e-18  Score=128.11  Aligned_cols=151  Identities=20%  Similarity=0.250  Sum_probs=111.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......++|+|+++++.     +..                 ++.. ...++...+..+..+.+.|
T Consensus        59 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~~  116 (268)
T 3sxs_A           59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGC-----LLN-----------------YLRSHGKGLEPSQLLEMCYDVCEG  116 (268)
T ss_dssp             HCCCTTBCCEEEEECSSSSEEEEEECCTTCB-----HHH-----------------HHHHHGGGCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEccCCceEEEEEccCCCc-----HHH-----------------HHHHcCCCCCHHHHHHHHHHHHHH
Confidence            3567777777777666666777777776521     111                 2221 1234566777778888899


Q ss_pred             ceeeccCCcccccc-cc---------------cccc----------------------cC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH----------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~----------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               +++.                      |. ....++. + |||+|    
T Consensus       117 l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  196 (268)
T 3sxs_A          117 MAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMW  196 (268)
T ss_dssp             HHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHH
T ss_pred             HHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHH
Confidence            99999999999996 55               1111                      10 1235688 8 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                               |.+.+..++...+..+.++..|..+|+++.+|+.+||+.||++|||++++++.|+.+.+
T Consensus       197 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          197 EVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence                     55566777888888888888889999999999999999999999999999999987754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.66  E-value=1.8e-18  Score=130.59  Aligned_cols=160  Identities=19%  Similarity=0.281  Sum_probs=115.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~l~~li~~~~~~a   81 (189)
                      ..+.|+|++++++.+......+||+|++.++.     +...    +     ......  .-.....+....++.+..+.+
T Consensus        83 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~~----l-----~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  148 (322)
T 1p4o_A           83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD-----LKSY----L-----RSLRPAMANNPVLAPPSLSKMIQMAGEIA  148 (322)
T ss_dssp             GGCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHHH----H-----HHHHHHHHHCTTCCCCCHHHHHHHHHHHH
T ss_pred             HhcCCCCEeeeEEEEccCCccEEEEEeCCCCc-----HHHH----H-----HHhchhhccCCCCCCcCHHHHHHHHHHHH
Confidence            35678888888887766677788888877622     1110    0     000000  000012234677778888899


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec-
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG-  118 (189)
                      .|+.++|..+++|+|+ |+               +++...                        ....++. + |||+| 
T Consensus       149 ~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  228 (322)
T 1p4o_A          149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV  228 (322)
T ss_dssp             HHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHH
Confidence            9999999999999996 55               222111                        2355788 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                  |.+.+..++...+..+..++.|..+|.++.+|+.+||+.||++|||+.++++.|+.++.
T Consensus       229 il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          229 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence                        56667788888888888888889999999999999999999999999999999987644

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.65  E-value=6.9e-18  Score=125.41  Aligned_cols=152  Identities=20%  Similarity=0.343  Sum_probs=112.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+......++|+|++.+ +    ++..                 ++..  ...+....+..+..+.+.
T Consensus        65 ~l~h~~i~~~~~~~~~~~~~~~v~e~~~~-~----~L~~-----------------~~~~~~~~~~~~~~~~~i~~~i~~  122 (288)
T 3kfa_A           65 EIKHPNLVQLLGVCTREPPFYIITEFMTY-G----NLLD-----------------YLRECNRQEVSAVVLLYMATQISS  122 (288)
T ss_dssp             HCCCTTBCCEEEEECSSSSEEEEEECCTT-E----EHHH-----------------HHHHCCTTTSCHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEccCCCEEEEEEcCCC-C----cHHH-----------------HHHhcccCCccHhHHHHHHHHHHH
Confidence            35677777777766666666777777664 2    1211                 2221  223456667777788889


Q ss_pred             CceeeccCCcccccc-cc---------------ccccc----------------------C-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHG----------------------T-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~----------------------~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |+               +++..                      . ....++. + |||+|   
T Consensus       123 ~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  202 (288)
T 3kfa_A          123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL  202 (288)
T ss_dssp             HHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHH
Confidence            999999999999996 55               11111                      0 2356788 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.++++.|+.++..
T Consensus       203 ~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          203 WEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence                      556666778888888888888999999999999999999999999999999999988874

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.65  E-value=1.4e-15  Score=104.57  Aligned_cols=79  Identities=24%  Similarity=0.285  Sum_probs=68.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCC-------CCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGR-------TTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~-------~~~~-l~   71 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+..+.|+||++.  .+.++|++|....++ ++.+.       ..|. +.
T Consensus        19 WyhG~isR~eAe~lL~--~~~~G~FLVR~S~~~~~~~~LSv~~--~~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~   94 (169)
T 2c9w_A           19 WYWGSMTVNEAKEKLK--EAPEGTFLIRDSSHSDYLLTISVKT--SAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVV   94 (169)
T ss_dssp             CBCTTCCHHHHHHHHT--TSCTTCEEEEECCSTTCSEEEEEEE--TTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHH
T ss_pred             ccccCCCHHHHHHHcC--CCCCcEEEEecCCCCCCeEEEEEEE--CCeeEEEEEEEeCCEEEEccccCccccCCCCCCHH
Confidence            9999999999999994  4578999999999888999999999  999999999986444 66653       6788 99


Q ss_pred             HHHHHhhhccCC
Q psy1684          72 ELVEHYSKDADG   83 (189)
Q Consensus        72 ~li~~~~~~a~g   83 (189)
                      +||+||...+.+
T Consensus        95 eLI~~y~~~~~~  106 (169)
T 2c9w_A           95 HLIDYYVQMCKD  106 (169)
T ss_dssp             HHHHHHHHHTC-
T ss_pred             HHHHHHHhCcCC
Confidence            999999987654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.64  E-value=1.6e-17  Score=124.85  Aligned_cols=168  Identities=18%  Similarity=0.253  Sum_probs=111.0

Q ss_pred             ChHHHHHHhcCCCCCCC-cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHG-AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g-~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++++++.+...++ .++|+|++.+ +.+.-.+.. .........+..    .-.....++...+..+..+.+.|+.
T Consensus        89 ~hp~iv~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~qi~~al~  162 (316)
T 2xir_A           89 HHLNVVNLLGACTKPGGPLMVIVEFCKF-GNLSTYLRS-KRNEFVPYKVAP----EDLYKDFLTLEHLICYSFQVAKGME  162 (316)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTT-EEHHHHHHT-CTTSEECC-----------CTTCEEHHHHHHHHHHHHHHHH
T ss_pred             cCCCeeeEEEEEecCCCceEEEEEcCCC-CcHHHHHHh-cccccccccccc----hhhhccccCHHHHHHHHHHHHHHHH
Confidence            46788887776554433 7888888775 311100000 000000000000    0000112446677778888899999


Q ss_pred             eeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |+               +++...                        ....++. + |||||     
T Consensus       163 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~  242 (316)
T 2xir_A          163 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  242 (316)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHH
Confidence            999999999996 54               222211                        2345788 9 99999     


Q ss_pred             --------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 --------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 --------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                              |.+.+ ...+...+..+.+++.|..+++++.+++.+||+.||++|||+.+|++.|+.+++...
T Consensus       243 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  313 (316)
T 2xir_A          243 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  313 (316)
T ss_dssp             HHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence                    33333 345666677888888889999999999999999999999999999999999998643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.64  E-value=1.3e-17  Score=125.24  Aligned_cols=169  Identities=19%  Similarity=0.269  Sum_probs=114.2

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++++++.+......+||+|++.. +++.-.+.. .......-.   .....+. ....+...++..+..+.+.|+.
T Consensus        85 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~  159 (313)
T 1t46_A           85 NHMNIVNLLGACTIGGPTLVITEYCCY-GDLLNFLRR-KRDSFICSK---TSPAIMEDDELALDLEDLLSFSYQVAKGMA  159 (313)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTT-EEHHHHHHH-TTTTC-----------------CCCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCeeeEEEEEecCCCcEEEEecCCC-CCHHHHHHh-ccccccccc---ccccccccccccCCHHHHHHHHHHHHHHHH
Confidence            688999988887777788999998876 321100100 000000000   0000111 1223457778888889999999


Q ss_pred             eeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |+               +++...                        ....++. + |||||     
T Consensus       160 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  239 (313)
T 1t46_A          160 FLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE  239 (313)
T ss_dssp             HHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHH
Confidence            999999999996 55               222111                        2345788 9 99999     


Q ss_pred             --------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         119 --------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       119 --------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                              |.+.+. ..+...+..+.++..|..+|.++.+|+.+||+.||++|||+.+|++.|+.+++...
T Consensus       240 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          240 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             HHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             HHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence                    334332 44555567777788888999999999999999999999999999999999987543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.64  E-value=1.4e-17  Score=122.75  Aligned_cols=148  Identities=18%  Similarity=0.230  Sum_probs=105.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|++.+ +    ++..                 ++. ...++...+..+..+.+.|+
T Consensus        62 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~~~-~~~~~~~~~~~i~~~l~~~l  118 (271)
T 3dtc_A           62 MLKHPNIIALRGVCLKEPNLCLVMEFARG-G----PLNR-----------------VLS-GKRIPPDILVNWAVQIARGM  118 (271)
T ss_dssp             HCCCTTBCCEEEEECCC--CEEEEECCTT-E----EHHH-----------------HHT-SSCCCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCEeeEEEEEecCCceEEEEEcCCC-C----CHHH-----------------Hhh-cCCCCHHHHHHHHHHHHHHH
Confidence            35677777777766666667777777665 2    1111                 222 33455666777788888999


Q ss_pred             eeeccCC---cccccc-cccccc----------cC---------------------------------CCCCccc-e-EE
Q psy1684          85 CVNLRKP---CVQVSC-RIYLVH----------GT---------------------------------NLSGVVV-S-AV  115 (189)
Q Consensus        85 ~~~~~~~---~~~~~~-p~~l~~----------~~---------------------------------~~~~~~~-s-Vw  115 (189)
                      .++|...   ++|+|+ |+.+.-          ..                                 ....++. + ||
T Consensus       119 ~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  198 (271)
T 3dtc_A          119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVW  198 (271)
T ss_dssp             HHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHH
T ss_pred             HHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHH
Confidence            9999987   889996 552211          00                                 2345788 9 99


Q ss_pred             Eec------------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         116 DFG------------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       116 sfG------------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                      |||            |.+.+..+....+. .....+.|..+|+++.+|+.+||+.||++|||+.++++.|+++
T Consensus       199 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          199 SYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            999            67777766666664 4556778889999999999999999999999999999999753

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.64  E-value=5.6e-16  Score=99.69  Aligned_cols=87  Identities=26%  Similarity=0.392  Sum_probs=72.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      ||||.|+|.+|+++|.    .+|+||||++...+ .|+||++.  .+.++|++|....+.|..+...|. +.+||+||..
T Consensus        18 WyhG~isR~eAe~lL~----~~G~FLVR~S~~~~-~y~LSv~~--~~~v~H~~I~~~~g~~~~~~~~F~sl~~LV~~y~~   90 (114)
T 1wqu_A           18 WYHGAIPRAEVAELLV----HSGDFLVRESQGKQ-EYVLSVLW--DGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLS   90 (114)
T ss_dssp             TEEESCCHHHHHTTCC----STTEEEEEECSSSC-CEEEEEEE--TTEEEEEECEECSSSEESSSCCBSSHHHHHHHHHH
T ss_pred             cEeeCCCHHHHHHHhc----cCCeEEEEEcCCCC-CEEEEEEE--CCEEEEEEEEecCCEEEECCCCCCCHHHHHHHHHH
Confidence            9999999999999884    47999999999886 99999999  999999999876433555677888 9999999998


Q ss_pred             ccCCc----eeeccCCccc
Q psy1684          80 DADGL----CVNLRKPCVQ   94 (189)
Q Consensus        80 ~a~gl----~~~~~~~~~~   94 (189)
                      ...++    ...+..||.+
T Consensus        91 ~~~~~~~~~~~~L~~Pv~r  109 (114)
T 1wqu_A           91 TQQPLTKKSGVVLHRAVPS  109 (114)
T ss_dssp             HCCCSCTTTCCCCCEECCS
T ss_pred             CCCCcCCCCCcEECcccCC
Confidence            76643    5556666654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.64  E-value=3.7e-18  Score=126.95  Aligned_cols=156  Identities=13%  Similarity=0.107  Sum_probs=106.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+...+..+||+|++.++.     +..                 ++.... .++......+..+.+.
T Consensus        67 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  124 (289)
T 4fvq_A           67 SKLSHKHLVLNYGVCVCGDENILVQEFVKFGS-----LDT-----------------YLKKNKNCINILWKLEVAKQLAA  124 (289)
T ss_dssp             HTSCCTTBCCEEEEECCTTCCEEEEECCTTCB-----HHH-----------------HHHHTGGGCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeEEEEEEEeCCCCEEEEECCCCCC-----HHH-----------------HHHhCCCCCCHHHHHHHHHHHHH
Confidence            35678888888887777777788888887522     211                 222222 2456667778888899


Q ss_pred             CceeeccCCcccccc-cccc----------------------------------------cccC-CC-CCccc-e-EEEe
Q psy1684          83 GLCVNLRKPCVQVSC-RIYL----------------------------------------VHGT-NL-SGVVV-S-AVDF  117 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~l----------------------------------------~~~~-~~-~~~~~-s-Vwsf  117 (189)
                      |+.++|..+++|+|+ |+.+                                        |+|. .. ..++. + ||||
T Consensus       125 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl  204 (289)
T 4fvq_A          125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSF  204 (289)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHH
T ss_pred             HHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHH
Confidence            999999999999996 5511                                        1111 12 45888 9 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      |             +.+.+..........  +...|..+++++.+|+.+||+.||++|||+.++++.|+++++...+..
T Consensus       205 G~il~el~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~  281 (289)
T 4fvq_A          205 GTTLWEICSGGDKPLSALDSQRKLQFYED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR  281 (289)
T ss_dssp             HHHHHHHHTTTCCTTTTSCHHHHHHHHHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred             HHHHHHHHcCCCCCccccchHHHHHHhhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence            9             344444444444433  344566778999999999999999999999999999999988655443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.64  E-value=6.9e-18  Score=125.08  Aligned_cols=151  Identities=24%  Similarity=0.328  Sum_probs=108.1

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCCc
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~gl   84 (189)
                      ++|+|++++++... .+..|+|+|+...+.     +..                 ++.. ...++...+..+..+.+.|+
T Consensus        70 l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~i~~~l  126 (281)
T 3cc6_A           70 LDHPHIVKLIGIIE-EEPTWIIMELYPYGE-----LGH-----------------YLERNKNSLKVLTLVLYSLQICKAM  126 (281)
T ss_dssp             HCCTTBCCEEEEEC-SSSCEEEEECCTTCB-----HHH-----------------HHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcceEEEEEc-CCCCEEEEecCCCCC-----HHH-----------------HHHhccccCCHHHHHHHHHHHHHHH
Confidence            45666666665543 334566666655421     111                 2221 22345666777788889999


Q ss_pred             eeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec-----
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG-----  118 (189)
                      .++|..+++|+|+ |+               +++...                       ....++. + |||||     
T Consensus       127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  206 (281)
T 3cc6_A          127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWE  206 (281)
T ss_dssp             HHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHH
Confidence            9999999999996 54               222111                       2356788 9 99999     


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                              |.+.+..++...+..+.+++.|..+|+++.+|+.+||+.||++|||+.++++.|+.+++..
T Consensus       207 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          207 ILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             HHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence                    3344556777778888888889999999999999999999999999999999999988753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.63  E-value=1.1e-17  Score=126.77  Aligned_cols=165  Identities=19%  Similarity=0.243  Sum_probs=113.0

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++.+......+||+|++.. |++.-.+..  .....     .....+......++...+..+..+.+.|+.+
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  179 (333)
T 2i1m_A          108 QHENIVNLLGACTHGGPVLVITEYCCY-GDLLNFLRR--KSRVL-----ETDPAFAIANSTASTRDLLHFSSQVAQGMAF  179 (333)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTT-EEHHHHHHH--HHHHH-----SCC-------CCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEecCCceEEEEecCCC-CcHHHHHHH--hcccc-----cccccccccccccCHHHHHHHHHHHHHHHHH
Confidence            688999988888777788999998876 321100000  00000     0000011112334567778888899999999


Q ss_pred             eccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG------  118 (189)
                      +|..+++|+|+ |+               +++...                        ....++. + |||||      
T Consensus       180 lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  259 (333)
T 2i1m_A          180 LASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI  259 (333)
T ss_dssp             HHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHH
Confidence            99999999996 54               222211                        2345788 9 99999      


Q ss_pred             -------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                             |.+... ..+...+..+.+++.|..+|+++.+|+.+||+.||++|||+.+|++.|+.+....
T Consensus       260 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  328 (333)
T 2i1m_A          260 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED  328 (333)
T ss_dssp             TTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence                   333332 3444555777788888999999999999999999999999999999999887653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.63  E-value=1.8e-17  Score=128.66  Aligned_cols=144  Identities=10%  Similarity=0.016  Sum_probs=102.2

Q ss_pred             CCChHHHHHHhcCCCC------CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhh
Q psy1684           5 KIKRIEAEKKLLLPEN------DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYS   78 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~------~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~   78 (189)
                      .++|+|+++++++...      ....|||+|++.+ +     +..                 ++.....++..+...+..
T Consensus       109 ~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~-----L~~-----------------~i~~~~~l~~~~~~~~~~  165 (398)
T 4b99_A          109 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-D-----LHQ-----------------IIHSSQPLTLEHVRYFLY  165 (398)
T ss_dssp             HCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSE-E-----HHH-----------------HHTSSSCCCHHHHHHHHH
T ss_pred             hcCCCCcceEeeeeecccccccCCEEEEEEeCCCC-C-----HHH-----------------HHHhcCCCCHHHHHHHHH
Confidence            5678888888875432      1345788888742 2     112                 344455666777778889


Q ss_pred             hccCCceeeccCCcccccc-cc---------------cccccC--------------------------CC-CCccc-e-
Q psy1684          79 KDADGLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------------NL-SGVVV-S-  113 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------------~~-~~~~~-s-  113 (189)
                      ++..|+.|+|..+++|||+ |+               |+|+..                          .+ ..|+. + 
T Consensus       166 qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~D  245 (398)
T 4b99_A          166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID  245 (398)
T ss_dssp             HHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHH
T ss_pred             HHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhh
Confidence            9999999999999999996 66               444321                          33 34688 9 


Q ss_pred             EEEec------------CCCCChHHHHHHHHc--CCCC-----------------------CC-----CCCCCHHHHHHH
Q psy1684         114 AVDFG------------SGGMTNAEVLHQVEH--GYRM-----------------------PC-----PPGCPPRLYDIM  151 (189)
Q Consensus       114 VwsfG------------~~~~~~~~~~~~v~~--g~~~-----------------------~~-----p~~~p~~~~~l~  151 (189)
                      |||+|            |.+.+..+.+..+..  |...                       +.     .+.+++++.+|+
T Consensus       246 iWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl  325 (398)
T 4b99_A          246 LWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLL  325 (398)
T ss_dssp             HHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHH
T ss_pred             eehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHH
Confidence            99999            888877777666632  2110                       00     124678999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q psy1684         152 LECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       152 ~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+|+..||++|||++|+++.
T Consensus       326 ~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          326 GRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             HHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHCcCChhHCcCHHHHhcC
Confidence            99999999999999998863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.63  E-value=2.3e-17  Score=124.25  Aligned_cols=153  Identities=14%  Similarity=0.100  Sum_probs=109.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......++|+|++.+ +    ++..                 ++.... .++...+..+..+.+.
T Consensus        84 ~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  141 (319)
T 2y4i_B           84 RQTRHENVVLFMGACMSPPHLAIITSLCKG-R----TLYS-----------------VVRDAKIVLDVNKTRQIAQEIVK  141 (319)
T ss_dssp             TTCCCTTBCCCCEEEECSSCEEEECBCCCS-E----EHHH-----------------HTTSSCCCCCSHHHHHHHHHHHH
T ss_pred             hcCCCCCEeEEEEEEecCCceEEEeecccC-C----cHHH-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            456777777777766666666777777654 2    1111                 333322 3456677778888899


Q ss_pred             CceeeccCCcccccc-cc--------------cc--------------------------cccC-C---------CCCcc
Q psy1684          83 GLCVNLRKPCVQVSC-RI--------------YL--------------------------VHGT-N---------LSGVV  111 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~--------------~l--------------------------~~~~-~---------~~~~~  111 (189)
                      |+.++|..+++|+|+ |+              ++                          ++|. .         ...++
T Consensus       142 al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~  221 (319)
T 2y4i_B          142 GMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS  221 (319)
T ss_dssp             HHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCC
T ss_pred             HHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCC
Confidence            999999999999986 44              22                          1111 1         23478


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                      . + |||||            |.+.+..++...+..+.++..+ ..+|.++.+|+.+||+.||++|||+.++++.|+.+.
T Consensus       222 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          222 KHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            8 9 99999            7777778888888777666544 468999999999999999999999999999998876


Q ss_pred             hh
Q psy1684         177 TM  178 (189)
Q Consensus       177 ~~  178 (189)
                      +.
T Consensus       302 ~~  303 (319)
T 2y4i_B          302 KR  303 (319)
T ss_dssp             --
T ss_pred             Hh
Confidence            54

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.63  E-value=1.1e-15  Score=104.03  Aligned_cols=89  Identities=21%  Similarity=0.258  Sum_probs=74.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCC-------CCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGR-------TTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~-------~~~~-l~   71 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++.+..+.|+||++.  .+.++|++|....++ ++...       ..|. +.
T Consensus        25 WyhG~IsR~eAe~lL~~--~~~GtFLVR~S~s~~g~y~LSvr~--~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~  100 (164)
T 2bbu_A           25 FYWSAVTGGEANLLLSA--EPAGTFLIRDSSDQRHFFTLSVKT--QSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVL  100 (164)
T ss_dssp             CCCTTSCHHHHHHHHHH--SSTTCCEEEECSTTSCCEEEEECC--TTCCEEEECEEETTEEESSSCCCCCSSCTTCCHHH
T ss_pred             ccCCCCCHHHHHHHhcC--CCCCCEEEEECCCCCCCEEEEEEE--CCceEEEEEEeCCCeEEEecCcccccCCCccCCHH
Confidence            99999999999999943  578999999999888999999999  999999999974444 66654       6788 99


Q ss_pred             HHHHHhhhccC--CceeeccCCcc
Q psy1684          72 ELVEHYSKDAD--GLCVNLRKPCV   93 (189)
Q Consensus        72 ~li~~~~~~a~--gl~~~~~~~~~   93 (189)
                      +||+||.....  |++..+..|+.
T Consensus       101 eLV~~Y~~~~~~~~~~~~l~ep~~  124 (164)
T 2bbu_A          101 KLVHHYMPPPGTPSFSLPPTEPSS  124 (164)
T ss_dssp             HHHHHHSCCCSCSCCSSSCSSCCS
T ss_pred             HHHHHHhhCCCCCCccccccCCCc
Confidence            99999998765  67766666643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.62  E-value=7.3e-18  Score=126.08  Aligned_cols=111  Identities=24%  Similarity=0.455  Sum_probs=86.1

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------  105 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               +++...                         
T Consensus       122 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  201 (302)
T 4e5w_A          122 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL  201 (302)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee
Confidence            4556777778888899999999999999996 55               222110                         


Q ss_pred             CCCCccc-e-EEEec------CCC---------------------CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcc
Q psy1684         106 NLSGVVV-S-AVDFG------SGG---------------------MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------~~~---------------------~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~  156 (189)
                      ....++. + |||+|      +.+                     ....++...+..+.+++.|..+|+++.+|+.+||+
T Consensus       202 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  281 (302)
T 4e5w_A          202 MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWE  281 (302)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             cCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            2345778 8 99999      111                     12234556667788888999999999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHh
Q psy1684         157 KDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~  177 (189)
                      .||++|||+.++++.|+.+++
T Consensus       282 ~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          282 FQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCCCCCCCHHHHHHHHHHHhC
Confidence            999999999999999998863

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.62  E-value=2e-15  Score=123.28  Aligned_cols=92  Identities=35%  Similarity=0.514  Sum_probs=85.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||+|.+.+|.|+||++.  .+.++||+|.+..+|  |+.+...|. +.+||+||
T Consensus        10 W~~g~i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~--~~~~~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~~y   87 (613)
T 2ozo_A           10 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH--DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFY   87 (613)
T ss_dssp             TBCBSCCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEE--TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHH
T ss_pred             CcCccCCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEE--CCeEEEEEEEECCCCcEEECCCCCcCCHHHHHHHH
Confidence            9999999999999998777789999999999999999999999  999999999987677  777788899 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ....+|+...+..||..
T Consensus        88 ~~~~~~l~~~L~~p~~~  104 (613)
T 2ozo_A           88 SRDPDGLPCNLRKPCNR  104 (613)
T ss_dssp             TSCCTTSSSCCCSBCCC
T ss_pred             hhCCCCCCccCCccCCC
Confidence            99999999999998865

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.61  E-value=2.2e-17  Score=122.71  Aligned_cols=147  Identities=18%  Similarity=0.276  Sum_probs=101.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++...  +..+||+|++..+.     +..                 ++. ....+.......+..+.+.|
T Consensus        79 ~l~h~~i~~~~~~~~--~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~l~~~  134 (287)
T 4f0f_A           79 NLNHPNIVKLYGLMH--NPPRMVMEFVPCGD-----LYH-----------------RLLDKAHPIKWSVKLRLMLDIALG  134 (287)
T ss_dssp             TCCCTTBCCEEEEET--TTTEEEEECCTTCB-----HHH-----------------HHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCchhhheeec--CCCeEEEEecCCCC-----HHH-----------------HHhcccCCccHHHHHHHHHHHHHH
Confidence            456777777766543  23467777766521     111                 121 12345566677777888889


Q ss_pred             ceeeccCC--cccccc-ccc--------------------------------------ccccCC---CCCccc-e-EEEe
Q psy1684          84 LCVNLRKP--CVQVSC-RIY--------------------------------------LVHGTN---LSGVVV-S-AVDF  117 (189)
Q Consensus        84 l~~~~~~~--~~~~~~-p~~--------------------------------------l~~~~~---~~~~~~-s-Vwsf  117 (189)
                      +.++|...  ++|+|+ |+.                                      +++|..   ...++. + |||+
T Consensus       135 l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~sl  214 (287)
T 4f0f_A          135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSF  214 (287)
T ss_dssp             HHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHH
T ss_pred             HHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHH
Confidence            99999988  999986 541                                      222222   334788 9 9999


Q ss_pred             c------------CCCCChH--HHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         118 G------------SGGMTNA--EVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       118 G------------~~~~~~~--~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                      |            |.+.+..  .....+ ..+.++..|..+|+++.+|+.+||+.||++|||+++|++.|+++
T Consensus       215 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            9            4444332  223444 56677888999999999999999999999999999999999753

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.61  E-value=2.2e-15  Score=101.62  Aligned_cols=77  Identities=23%  Similarity=0.259  Sum_probs=67.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCC-------CCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGR-------TTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~-------~~~~-l~   71 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++...++.|+||++.  .+.++|++|....++ ++...       ..|. +.
T Consensus        36 WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~  111 (152)
T 2hmh_A           36 FYWSAVTGGEANLLLSA--EPAGTFLIRDSSDQRHFFTLSVKT--QSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVL  111 (152)
T ss_dssp             SEETTCCHHHHHHHHHT--SCTTEEEEEECCSTTCSEEEEEEE--TTEEEEEEEECGGGCBEECBCTTCSSCCCCBSSHH
T ss_pred             CcCCCCCHHHHHHHhcC--CCCCcEEEEeCCCCCCcEEEEEEc--CCceEEEEEEecCCEEEEecccccccccCccCCHH
Confidence            99999999999999953  578999999999888999999999  999999999984444 66654       6788 99


Q ss_pred             HHHHHhhhcc
Q psy1684          72 ELVEHYSKDA   81 (189)
Q Consensus        72 ~li~~~~~~a   81 (189)
                      +||+||....
T Consensus       112 eLV~~Y~~~~  121 (152)
T 2hmh_A          112 KLVHHYMPPQ  121 (152)
T ss_dssp             HHHHHTCCCC
T ss_pred             HHHHHHhhCc
Confidence            9999998875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.61  E-value=8.9e-18  Score=136.02  Aligned_cols=144  Identities=19%  Similarity=0.159  Sum_probs=108.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|+++++.........|||+|+++++. +    ..                 +|.. ...+...+...+..++..|
T Consensus       210 ~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~-L----~~-----------------~i~~~~~~l~e~~~~~~~~qi~~a  267 (573)
T 3uto_A          210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE-L----FE-----------------KVADEHNKMSEDEAVEYMRQVCKG  267 (573)
T ss_dssp             HTCCTTBCCEEEEEECSSEEEEEEECCCCCB-H----HH-----------------HHTCTTSCEEHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEEECCEEEEEEeecCCCc-H----HH-----------------HHHHhCCCCCHHHHHHHHHHHHHH
Confidence            4678888888877666677788888887632 1    11                 2322 2345566677788899999


Q ss_pred             ceeeccCCcccccc-cc-----------------cccc--------------------cC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI-----------------YLVH--------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~-----------------~l~~--------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.|+|...++|||+ |+                 |+|+                    |. .+..|+. + |||+|    
T Consensus       268 l~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily  347 (573)
T 3uto_A          268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY  347 (573)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence            99999999999996 66                 2222                    11 4566999 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCC-CCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGY-RMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~-~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+.+..+++..+..+. .++  .+..+++++.+||.+||..||++|||+.|+++
T Consensus       348 eml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          348 ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    78888888888887663 222  23578999999999999999999999999986

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.61  E-value=1.5e-15  Score=105.35  Aligned_cols=90  Identities=21%  Similarity=0.250  Sum_probs=74.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCC----CCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGR----TTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~----~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|.  ...+|+||||+|.+..+.|+||++.  .+.++|++|...+++ ++...    ..|. +.+||
T Consensus        36 WYhG~isR~eAE~lL~--~~~dGtFLVR~S~~~~~~lsLSvr~--~~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV  111 (187)
T 2izv_A           36 CYWGVMDKYAAEALLE--GKPEGTFLLRDSAQEDYLFSVSFRR--YSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLL  111 (187)
T ss_dssp             TEEEECCHHHHHHHHT--TCCTTEEEEEECSSTTCSEEEEEEE--TTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHhc--CCCCCcEEEEECCCCCceEEEEEee--CCeEEEEEEEECCCEEEEeccCCCccccCCHHHHH
Confidence            9999999999999994  3478999999999877789999999  899999999987555 66543    2688 99999


Q ss_pred             HHhhhccCCce--eeccCCccc
Q psy1684          75 EHYSKDADGLC--VNLRKPCVQ   94 (189)
Q Consensus        75 ~~~~~~a~gl~--~~~~~~~~~   94 (189)
                      +||...+.++.  ..+..|+..
T Consensus       112 ~hY~~~~~~~~~~~~L~~Pv~r  133 (187)
T 2izv_A          112 EHYKDPSACMFFEPLLSTPLIR  133 (187)
T ss_dssp             HHTCCGGGCCTTSCCCCEECCC
T ss_pred             HHHHhccccccccccccccccc
Confidence            99999888763  455566544

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.60  E-value=2.4e-15  Score=123.25  Aligned_cols=92  Identities=28%  Similarity=0.357  Sum_probs=84.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||+|.+.+|.|+||++.  .+.++||+|.+..+|  ++.+...|. +.+|++||
T Consensus        15 Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~--~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~~y   92 (635)
T 4fl3_A           15 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAH--GRKAHHYTIERELNGTYAIAGGRTHASPADLCHYH   92 (635)
T ss_dssp             TBCBSCCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEE--TTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEe--CCEEEeEEEEEcCCCCEEeCCCCccCCHHHHHHHH
Confidence            9999999999999997766678999999999988999999999  999999999988777  777788899 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ...++|+...+..||..
T Consensus        93 ~~~~~~l~~~L~~p~~~  109 (635)
T 4fl3_A           93 SQESDGLVCLLKKPFNR  109 (635)
T ss_dssp             TTCCTTSSSCCCEECCC
T ss_pred             hhCCCCCeeccCCcCCC
Confidence            99999999999988864

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.60  E-value=3.8e-15  Score=110.29  Aligned_cols=90  Identities=33%  Similarity=0.393  Sum_probs=78.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCC-CCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAG-RTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~-~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|.  ...+|+||||+| +.+|.|+||++.  .+.++||+|....+| ++.. ...|. +.+||+||
T Consensus       196 WyhG~IsR~eAE~lL~--~~~~GtFLVR~S-s~~g~y~LSv~~--~~~V~H~rI~~~~~g~~~~~~~~~F~SL~eLV~~Y  270 (302)
T 2y3a_B          196 WYVGKINRTQAEEMLS--GKRDGTFLIRES-SQRGCYACSVVV--DGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHY  270 (302)
T ss_dssp             TBCCSCCHHHHHHHHT--TSCTTBEEBCCC-SSTTCEEEEEEC--SSSEEEEEEEEETTEEESBTTBCCCSSHHHHHHTT
T ss_pred             ccCCCCCHHHHHHHhc--CCCCCcEEEEec-cCCCceEEEEEe--CCeeEEEEEEECCCceEEeCCCCCCCCHHHHHHHH
Confidence            9999999999999994  468899999999 778999999999  999999999998888 5554 36788 99999999


Q ss_pred             hhc-----cCCceeeccCCcccc
Q psy1684          78 SKD-----ADGLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~-----a~gl~~~~~~~~~~~   95 (189)
                      ...     .+|+.+.+..||...
T Consensus       271 ~~~~L~~~~~gl~~~L~~Pv~~~  293 (302)
T 2y3a_B          271 QHASLVQHNDALTVTLAHPVRAP  293 (302)
T ss_dssp             SSSCSTTTCSSCCCCCSBCSCCC
T ss_pred             HhCCccccCCCCceeeCCccCCC
Confidence            874     468888899888663

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.59  E-value=1.9e-17  Score=125.37  Aligned_cols=152  Identities=20%  Similarity=0.233  Sum_probs=102.7

Q ss_pred             CCChHHHHHHhcCCCCC--CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPEND--HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~--~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a   81 (189)
                      .++|+|++++++.+...  ...+||+|+.+.+.     +..                 ++... ..+....+..+..+.+
T Consensus        98 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~  155 (326)
T 2w1i_A           98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-----LRD-----------------YLQKHKERIDHIKLLQYTSQIC  155 (326)
T ss_dssp             TCCCTTBCCEEEEECC----CCEEEECCCTTCB-----HHH-----------------HHHHSTTSSCHHHHHHHHHHHH
T ss_pred             hCCCCCeeeEEEEEEecCCCceEEEEECCCCCC-----HHH-----------------HHHhcccCCCHHHHHHHHHHHH
Confidence            45666666666544322  24566776665421     111                 22222 2355667777888889


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC-------------------------CCCCccc-e-EEEec
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------NLSGVVV-S-AVDFG  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~~~~~~~-s-VwsfG  118 (189)
                      .|+.++|..+++|+|+ |+               +++...                         ....++. + |||||
T Consensus       156 ~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  235 (326)
T 2w1i_A          156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFG  235 (326)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             HHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHH
Confidence            9999999999999996 55               221110                         1234678 8 99999


Q ss_pred             ------CCCCC----------------------hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGMT----------------------NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~~----------------------~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            +.+..                      ...+...+..+.+++.|..+|+++.+||.+||+.||++|||+.+|++
T Consensus       236 ~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          236 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  11110                      11334455667788889999999999999999999999999999999


Q ss_pred             HHHHHHhh
Q psy1684         171 KLEDFFTM  178 (189)
Q Consensus       171 ~l~~~~~~  178 (189)
                      .|+.+.+.
T Consensus       316 ~L~~l~~~  323 (326)
T 2w1i_A          316 RVDQIRDQ  323 (326)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.59  E-value=5e-17  Score=123.38  Aligned_cols=144  Identities=13%  Similarity=0.094  Sum_probs=104.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......|||+|+++++.     +..                 ++.....++..+...+..+.+.|+
T Consensus        70 ~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~l~~~~~~~~~~qi~~al  127 (328)
T 3fe3_A           70 ILNHPNIVKLFEVIETEKTLYLIMEYASGGE-----VFD-----------------YLVAHGRMKEKEARSKFRQIVSAV  127 (328)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEECCCTTCB-----HHH-----------------HHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEEECCEEEEEEECCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            3567777777776655666777777776522     111                 232233455566677778888999


Q ss_pred             eeeccCCcccccc-cc---------------cccccC---------------------CCCCcc-c-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVHGT---------------------NLSGVV-V-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~~~---------------------~~~~~~-~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++...                     ....++ . + |||+|      
T Consensus       128 ~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  207 (328)
T 3fe3_A          128 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL  207 (328)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHH
Confidence            9999999999996 55               222211                     234444 6 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            |.+.+..++...+..+. ...|..+++++.+|+.+||..||++|||++++++.
T Consensus       208 l~g~~pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          208 VSGSLPFDGQNLKELRERVLRGK-YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                  78888888888887764 45678899999999999999999999999999863

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.59  E-value=3.5e-17  Score=122.89  Aligned_cols=113  Identities=16%  Similarity=0.115  Sum_probs=84.2

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLS  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~  108 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |.               +++                     +|. ...
T Consensus       132 ~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  211 (310)
T 2wqm_A          132 LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN  211 (310)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCC
Confidence            3446667777888889999999999999986 44               111                     111 345


Q ss_pred             Cccc-e-EEEec------------CCC--CChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGG--MTNAEVLHQVEHGYRMPCP-PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~--~~~~~~~~~v~~g~~~~~p-~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++. + |||||            |.+  .+..++...+..+..++.+ ..+|.++.+|+.+||+.||++|||+.+|++.
T Consensus       212 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          212 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            6788 9 99999            322  2344566666666555444 6789999999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy1684         172 LEDFFTME  179 (189)
Q Consensus       172 l~~~~~~~  179 (189)
                      |+++....
T Consensus       292 l~~l~~~~  299 (310)
T 2wqm_A          292 AKRMHACT  299 (310)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            99987753

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.58  E-value=4.9e-15  Score=107.63  Aligned_cols=92  Identities=26%  Similarity=0.412  Sum_probs=75.7

Q ss_pred             CCCCCC-----ChHHHHHHhcC----CCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-----ccCCCC
Q psy1684           1 WYFGKI-----KRIEAEKKLLL----PENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-----QKAGRT   66 (189)
Q Consensus         1 w~~g~l-----~~~n~~~lL~~----~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-----yl~~~~   66 (189)
                      ||||.|     +|..|+++|..    ....+|+||||+|.+.+|+|+||++.  .+.++||+|....++     |+.+..
T Consensus         6 WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~--~~~v~H~~I~~~~~~g~~~~~~~~~~   83 (246)
T 4fbn_A            6 WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWR--NGKVQHCRIHSRQDAGTPKFFLTDNL   83 (246)
T ss_dssp             TBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEEECGGGCCEEEEETTE
T ss_pred             CcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEE--CCEEEEEEEEEECCCCceeEEecCCc
Confidence            999999     79999999942    24578999999999999999999999  999999999876543     677777


Q ss_pred             CcC-HhHHHHHhhhcc---CCceeeccCCccc
Q psy1684          67 TIH-YPELVEHYSKDA---DGLCVNLRKPCVQ   94 (189)
Q Consensus        67 ~~~-l~~li~~~~~~a---~gl~~~~~~~~~~   94 (189)
                      .|. +.+||.||+++.   +++...+..++..
T Consensus        84 ~F~sl~~LV~~y~~~~l~~~~~~~~l~~p~p~  115 (246)
T 4fbn_A           84 VFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQ  115 (246)
T ss_dssp             EESSHHHHHHHHHHSCEECSSCEECCCCBCCC
T ss_pred             ccCCHHHHHHhHhhcccccccccccccccccc
Confidence            898 999999998864   4666555555544

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.58  E-value=1.6e-17  Score=127.59  Aligned_cols=118  Identities=15%  Similarity=0.046  Sum_probs=84.0

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------ccccc-----------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------YLVHG-----------------------  104 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------~l~~~-----------------------  104 (189)
                      ..++...+..+..+++.|+.++|..+++|+|+ |+                 |+++.                       
T Consensus       147 ~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  226 (364)
T 3op5_A          147 KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIE  226 (364)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCC
Confidence            45667788888899999999999999999996 55                 22211                       


Q ss_pred             -----C-CCCCccc-e-EEEec------------CCCC-ChHHHHHHHHcCCCCC---------CCCCCCHHHHHHHHHh
Q psy1684         105 -----T-NLSGVVV-S-AVDFG------------SGGM-TNAEVLHQVEHGYRMP---------CPPGCPPRLYDIMLEC  154 (189)
Q Consensus       105 -----~-~~~~~~~-s-VwsfG------------~~~~-~~~~~~~~v~~g~~~~---------~p~~~p~~~~~l~~~C  154 (189)
                           . ....++. + |||||            |.+. ...........+.+..         .+..+|.++.+||..|
T Consensus       227 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  306 (364)
T 3op5_A          227 FTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETV  306 (364)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHH
T ss_pred             ccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHH
Confidence                 0 3345888 9 99999            4432 1222221111111111         1367899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         155 WLKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       155 ~~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      |+.||++||++.+|++.|+.+++..+..+
T Consensus       307 l~~~p~~RP~~~~l~~~l~~~~~~~~~~~  335 (364)
T 3op5_A          307 KLLDYTEKPLYENLRDILLQGLKAIGSKD  335 (364)
T ss_dssp             HTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence            99999999999999999999998765444

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.58  E-value=2.3e-17  Score=124.55  Aligned_cols=155  Identities=15%  Similarity=0.173  Sum_probs=105.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC----CCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG----RTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~----~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+......++|+|++.++.     +..                 ++..    ...+....+..+..+
T Consensus        90 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~i~~~  147 (321)
T 2qkw_B           90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGN-----LKR-----------------HLYGSDLPTMSMSWEQRLEICIG  147 (321)
T ss_dssp             GSCCCTTBCCEEEECCCTTCCEEEEECCTTCB-----TGG-----------------GSSSSCCCSCCCCHHHHHHHHHH
T ss_pred             HhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc-----HHH-----------------HHhccCCCccccCHHHHHHHHHH
Confidence            46789999999988877778899999887632     111                 2211    123446777788888


Q ss_pred             ccCCceeeccCCcccccc-cc---------------ccccc-----------------------C-CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVHG-----------------------T-NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~~-----------------------~-~~~~~~~-s-Vwsf  117 (189)
                      .+.|+.++|..+++|+|+ |+               +++..                       . ....++. + ||||
T Consensus       148 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  227 (321)
T 2qkw_B          148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSF  227 (321)
T ss_dssp             HHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHH
T ss_pred             HHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhH
Confidence            999999999999999996 54               22211                       0 2356788 9 9999


Q ss_pred             c------------CCCCCh------HHH-HHHHHcC---------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         118 G------------SGGMTN------AEV-LHQVEHG---------YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       118 G------------~~~~~~------~~~-~~~v~~g---------~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      |            |.+..+      .+. ......+         .....+..++.++.+++.+||+.||++|||+.+++
T Consensus       228 G~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  307 (321)
T 2qkw_B          228 GVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL  307 (321)
T ss_dssp             HHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            9            222111      111 1111111         11122344667899999999999999999999999


Q ss_pred             HHHHHHHhhcC
Q psy1684         170 WKLEDFFTMEG  180 (189)
Q Consensus       170 ~~l~~~~~~~~  180 (189)
                      +.|+.+++..+
T Consensus       308 ~~L~~~l~~~~  318 (321)
T 2qkw_B          308 WKLEYALRLQE  318 (321)
T ss_dssp             HHHHHHHHSSC
T ss_pred             HHHHHHhhccc
Confidence            99999987543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.58  E-value=2.5e-17  Score=124.36  Aligned_cols=113  Identities=23%  Similarity=0.349  Sum_probs=86.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccccc------------------------C-
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHG------------------------T-  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~------------------------~-  105 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               +++..                        . 
T Consensus       130 ~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~  209 (318)
T 3lxp_A          130 SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL  209 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHh
Confidence            3556777778888899999999999999996 54               22211                        1 


Q ss_pred             CCCCccc-e-EEEec------CCCC---------------------ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcc
Q psy1684         106 NLSGVVV-S-AVDFG------SGGM---------------------TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------~~~~---------------------~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~  156 (189)
                      ....++. + |||+|      ..+.                     ...++...+..+.+++.|..+|+++.+||.+||+
T Consensus       210 ~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  289 (318)
T 3lxp_A          210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWE  289 (318)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcC
Confidence            2235778 8 99999      1211                     1123445567788888999999999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         157 KDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      .||++|||+.++++.|+.+.+..
T Consensus       290 ~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          290 TEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCcccCcCHHHHHHHHHHHHHhh
Confidence            99999999999999999987753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.57  E-value=5.5e-17  Score=121.98  Aligned_cols=116  Identities=12%  Similarity=0.088  Sum_probs=80.5

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc-------------------------------------cccccC-C
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-------------------------------------YLVHGT-N  106 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-------------------------------------~l~~~~-~  106 (189)
                      ..+...++..+..+.+.|+.++|..+++|+|+ |+                                     ++++|. .
T Consensus       129 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          129 GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHc
Confidence            34556677778888889999999999999986 44                                     112222 2


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCC-CHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRP-TFETLQ  169 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP-~~~~i~  169 (189)
                      ...++. + |||||            |.+.+...+...+......  ..+..+|+++.+|+.+||+.||++|| ++.+++
T Consensus       209 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~  288 (309)
T 2h34_A          209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLS  288 (309)
T ss_dssp             C----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             CCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHH
Confidence            455788 9 99999            5555444444444433322  24578999999999999999999999 999999


Q ss_pred             HHHHHHHhhcCC
Q psy1684         170 WKLEDFFTMEGS  181 (189)
Q Consensus       170 ~~l~~~~~~~~~  181 (189)
                      +.|+.++.....
T Consensus       289 ~~l~~~l~~~~~  300 (309)
T 2h34_A          289 AAAHAALATADQ  300 (309)
T ss_dssp             HHHHHTCC----
T ss_pred             HHHHHHHHhhcc
Confidence            999988876543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.57  E-value=9.7e-17  Score=119.87  Aligned_cols=154  Identities=11%  Similarity=0.080  Sum_probs=108.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..|||+|+++++.     +..                 ++.....++...+..+..+.+.|
T Consensus        66 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~-----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~~  123 (294)
T 4eqm_A           66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT-----LSE-----------------YIESHGPLSVDTAINFTNQILDG  123 (294)
T ss_dssp             TTCCBTTBCCEEEEEECSSEEEEEEECCCSCB-----HHH-----------------HHHHHCSCCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCceEEEeeeeCCeEEEEEeCCCCCC-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHH
Confidence            35667777777766655555677777766521     111                 33323345567777788888999


Q ss_pred             ceeeccCCcccccc-cc---------------ccccc----------------------C-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHG----------------------T-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~----------------------~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               +++..                      . ....++. + |||+|    
T Consensus       124 l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~  203 (294)
T 4eqm_A          124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY  203 (294)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHH
T ss_pred             HHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHH
Confidence            99999999999996 55               22211                      1 3345788 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCC----CCCCCCHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHhhc
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRP-TFETLQWKLEDFFTME  179 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~----~p~~~p~~~~~l~~~C~~~~p~~RP-~~~~i~~~l~~~~~~~  179 (189)
                              |.+.+..+.......+..+.    .+..+|+.+.+++.+||+.||++|| +++++.+.|+.++...
T Consensus       204 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             HHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             HHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence                    67766665554544443332    3567999999999999999999998 9999999998887643

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.57  E-value=6.7e-18  Score=126.90  Aligned_cols=153  Identities=18%  Similarity=0.189  Sum_probs=100.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......++|+|++.++.     +..                 ++.. ...++..++..+..+.+.
T Consensus        62 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  119 (310)
T 3s95_A           62 RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT-----LRG-----------------IIKSMDSQYPWSQRVSFAKDIAS  119 (310)
T ss_dssp             TTCCCTTBCCEEEEEEETTEEEEEEECCTTCB-----HHH-----------------HHHHCCTTSCHHHHHHHHHHHHH
T ss_pred             HhCCCcCcccEEEEEecCCeeEEEEEecCCCc-----HHH-----------------HHHhccCCCCHHHHHHHHHHHHH
Confidence            45677777777776665556677777766521     111                 2222 234556777788889999


Q ss_pred             CceeeccCCcccccc-cc---------------cccc-----------------------------------cC-CCCCc
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVH-----------------------------------GT-NLSGV  110 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------------------~~-~~~~~  110 (189)
                      |+.++|..+++|+|+ |+               +++.                                   |. ....+
T Consensus       120 al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  199 (310)
T 3s95_A          120 GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY  199 (310)
T ss_dssp             HHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCC
T ss_pred             HHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCC
Confidence            999999999999996 54               2221                                   11 33457


Q ss_pred             cc-e-EEEec------------CCCCChHH--HHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAE--VLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~--~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                      +. + |||||            +.+.....  ....+........|..+|+++.+|+.+||+.||++|||+.+|++.|+.
T Consensus       200 ~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~  279 (310)
T 3s95_A          200 DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET  279 (310)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            88 9 99999            22111000  000000011123467899999999999999999999999999999988


Q ss_pred             HHhh
Q psy1684         175 FFTM  178 (189)
Q Consensus       175 ~~~~  178 (189)
                      +...
T Consensus       280 l~~~  283 (310)
T 3s95_A          280 LRMH  283 (310)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8654

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.57  E-value=9.2e-15  Score=111.43  Aligned_cols=90  Identities=30%  Similarity=0.463  Sum_probs=79.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCC-CCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESR-KNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~-~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+. +|.|+||++.  .+.++|++|....++ ++.....|. +.+||.||
T Consensus        12 WYhG~IsR~eAE~lL~--~~~dG~FLVR~S~s~~~g~y~LSvr~--~~~v~H~rI~~~~g~y~l~~~~~F~SL~eLV~~Y   87 (373)
T 3hhm_B           12 WYWGDISREEVNEKLR--DTADGTFLVRDASTKMHGDYTLTLRK--GGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHY   87 (373)
T ss_dssp             TEEESCCHHHHHHHTT--TCCTTEEEEEECSCC--CCEEEEEEE--TTEEEEEEECCSSSCBCSSSSCCBSSSHHHHHHH
T ss_pred             ccCCCCCHHHHHHHhc--CCCCCCEEEeccCCCCCCCEEEEEEE--CCeeEEEEEEecCCeEEeCCCCCcCCHHHHHHHH
Confidence            9999999999999995  347899999999987 8999999999  999999999977655 777667898 99999999


Q ss_pred             hhcc-----CCceeeccCCccc
Q psy1684          78 SKDA-----DGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a-----~gl~~~~~~~~~~   94 (189)
                      ...+     .|+...+..||..
T Consensus        88 ~~~~l~~~~~gl~~~L~~Pv~r  109 (373)
T 3hhm_B           88 RNESLAQYNPKLDVKLLYPVSK  109 (373)
T ss_dssp             HHSCGGGSCTTCCCCCCEECCS
T ss_pred             hhCCccccCCCCCcccCCCCCC
Confidence            9987     7888888888865

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.56  E-value=2.9e-16  Score=123.73  Aligned_cols=145  Identities=12%  Similarity=0.043  Sum_probs=105.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++........|||+|++.++.     +..                 ++.....++..++..+..+.+.|+
T Consensus        66 ~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~-----L~~-----------------~i~~~~~~~e~~~~~i~~qil~aL  123 (444)
T 3soa_A           66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGE-----LFE-----------------DIVAREYYSEADASHCIQQILEAV  123 (444)
T ss_dssp             HCCBTTBCCEEEEEECSSEEEEEECCCBCCB-----HHH-----------------HHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCcCCCeEEEEEEECCEEEEEEEeCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4577888887776666666777887776522     111                 222234455667777788888999


Q ss_pred             eeeccCCcccccc-cc------------------cccc---------------------cC-CCCCccc-e-EEEec---
Q psy1684          85 CVNLRKPCVQVSC-RI------------------YLVH---------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~------------------~l~~---------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      .++|..+++|+|+ |+                  |++.                     |. ....|+. + |||+|   
T Consensus       124 ~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil  203 (444)
T 3soa_A          124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL  203 (444)
T ss_dssp             HHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHH
Confidence            9999999999996 55                  1111                     11 3446899 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCC-CCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYR-MPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~-~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                               |.+.+..++...+..+.. .+.|  ..+++++.+|+.+||+.||++|||+.|+++.
T Consensus       204 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          204 YILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                     667777888888876643 3333  4789999999999999999999999999873

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.56  E-value=1.1e-16  Score=118.40  Aligned_cols=144  Identities=10%  Similarity=0.046  Sum_probs=101.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......++|+|++.. +    ++..                 ++.....+.......+..+.+.|+
T Consensus        65 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~----~l~~-----------------~l~~~~~~~~~~~~~~~~qi~~~l  122 (279)
T 3fdn_A           65 HLRHPNILRLYGYFHDATRVYLILEYAPL-G----TVYR-----------------ELQKLSKFDEQRTATYITELANAL  122 (279)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEECCCTT-E----EHHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcchhheEecCCEEEEEEecCCC-C----cHHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45666776666665555556666666554 2    1111                 222223455666777778888999


Q ss_pred             eeeccCCcccccc-cc---------------ccc-------------------ccC-CCCCccc-e-EEEec--------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV-------------------HGT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~-------------------~~~-~~~~~~~-s-VwsfG--------  118 (189)
                      .++|..+++|+|+ |+               +++                   +|. ....++. + |||+|        
T Consensus       123 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  202 (279)
T 3fdn_A          123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV  202 (279)
T ss_dssp             HHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH
Confidence            9999999999996 54               111                   111 3455788 8 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                          |.+.+..+....+..+ ....|..+++++.+|+.+||+.||++|||+.+|++.
T Consensus       203 g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          203 GKPPFEANTYQETYKRISRV-EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             SSCTTCCSSHHHHHHHHHHT-CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCCCCCCcHHHHHHHHHhC-CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                6666777777666554 355678899999999999999999999999999975

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.56  E-value=1.6e-17  Score=122.85  Aligned_cols=105  Identities=13%  Similarity=0.078  Sum_probs=84.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCC-----cccccc-ccc---------------c---------------------cccC
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKP-----CVQVSC-RIY---------------L---------------------VHGT  105 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~-----~~~~~~-p~~---------------l---------------------~~~~  105 (189)
                      ++...+..+..+.+.|+.++|...     ++|+|+ |+.               +                     ++|.
T Consensus       108 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  187 (279)
T 2w5a_A          108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ  187 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHH
Confidence            456677778888889999999988     999996 541               1                     1111


Q ss_pred             -CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 -NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 -~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                       ....++. + |||||            |.+.+..++...+..+..++.|..+|.++.+|+.+||+.||++|||+.+|++
T Consensus       188 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  267 (279)
T 2w5a_A          188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  267 (279)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence             2345788 9 99999            6777778888888888888888999999999999999999999999999987


Q ss_pred             HH
Q psy1684         171 KL  172 (189)
Q Consensus       171 ~l  172 (189)
                      .+
T Consensus       268 ~~  269 (279)
T 2w5a_A          268 NP  269 (279)
T ss_dssp             ST
T ss_pred             Ch
Confidence            65

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.56  E-value=4.1e-16  Score=123.76  Aligned_cols=144  Identities=12%  Similarity=0.059  Sum_probs=105.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......|||+|++.+ +    ++..                 ++.....++..+...+..+.+.|
T Consensus        71 ~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g-g----~L~~-----------------~l~~~~~l~~~~~~~i~~qi~~a  128 (476)
T 2y94_A           71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSG-G----ELFD-----------------YICKNGRLDEKESRRLFQQILSG  128 (476)
T ss_dssp             TTCCCTTBCCEEEEEECSSEEEEEEECCSS-E----EHHH-----------------HTTSSSSCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEEECCEEEEEEeCCCC-C----cHHH-----------------HHHhcCCCCHHHHHHHHHHHHHH
Confidence            345677777776665555566677776654 2    1111                 45545556677777888899999


Q ss_pred             ceeeccCCcccccc-cc---------------ccccc--------------------C-CCCCc-cc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHG--------------------T-NLSGV-VV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~--------------------~-~~~~~-~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+               |++..                    . ....+ +. + |||+|     
T Consensus       129 L~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  208 (476)
T 2y94_A          129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA  208 (476)
T ss_dssp             HHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHH
Confidence            99999999999996 55               22211                    1 23334 57 8 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |.+.+..++...+..+. ...|..+++++.+|+.+||+.||++|||+.+|++
T Consensus       209 lltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          209 LLCGTLPFDDDHVPTLFKKICDGI-FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHSSCSSCCSSSHHHHHHHHTTC-CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhhCCCCCCCCCHHHHHHHHhcCC-cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                   66767777888887764 4567889999999999999999999999999987

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.56  E-value=1.1e-16  Score=127.63  Aligned_cols=150  Identities=13%  Similarity=0.108  Sum_probs=107.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......+||+|++.++.     +..                 ++.....++..+...+..+++.|
T Consensus        91 ~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~~~~~~~~~~~~~~~i~~qi~~~  148 (494)
T 3lij_A           91 KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE-----LFD-----------------EIIHRMKFNEVDAAVIIKQVLSG  148 (494)
T ss_dssp             TTCCCTTBCCEEEEEECSSEEEEEEECCCSCB-----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEEeCCEEEEEEecCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHH
Confidence            45678888888877766666778888776522     111                 12222345555666677888889


Q ss_pred             ceeeccCCcccccc-cc------------------c--------------------ccccCCCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------Y--------------------LVHGTNLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------~--------------------l~~~~~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+                  |                    +|||...+.|+. + |||+|    
T Consensus       149 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~  228 (494)
T 3lij_A          149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILF  228 (494)
T ss_dssp             HHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHH
Confidence            99999999999996 55                  1                    112223356889 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCC-CCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRM-PCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK--LEDF  175 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~-~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~--l~~~  175 (189)
                              |.+.+..++...+..+... +.|  ..+++++.+|+.+||+.||++|||+.++++.  |..+
T Consensus       229 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          229 ILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence                    7788888888888766432 222  4689999999999999999999999999863  4444

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.55  E-value=7e-17  Score=128.43  Aligned_cols=146  Identities=12%  Similarity=0.069  Sum_probs=104.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......+||+|++.++.     +..                 ++.....++..++..+..+.+.|
T Consensus        81 ~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~i~~qi~~~  138 (484)
T 3nyv_A           81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE-----LFD-----------------EIISRKRFSEVDAARIIRQVLSG  138 (484)
T ss_dssp             TTCCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHTCSCCBHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEEeCCEEEEEEecCCCCC-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHH
Confidence            35567777777766555555666776665421     111                 33334455566777788888999


Q ss_pred             ceeeccCCcccccc-cccc--------------------------------------cccCCCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RIYL--------------------------------------VHGTNLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~l--------------------------------------~~~~~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+.+                                      |||...+.|+. + |||+|    
T Consensus       139 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~  218 (484)
T 3nyv_A          139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILY  218 (484)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHH
Confidence            99999999999996 5521                                      11113346889 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGY-RMPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~-~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+.+..+++..+..+. ..+.|  ..+++++.+|+.+||+.||++|||+.++++.
T Consensus       219 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          219 ILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence                    77888888888887664 33333  4689999999999999999999999999863

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.55  E-value=8.5e-17  Score=119.60  Aligned_cols=110  Identities=25%  Similarity=0.448  Sum_probs=85.8

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------------C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------N  106 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~  106 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               +++...                         .
T Consensus       118 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (291)
T 1u46_A          118 FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK  197 (291)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhc
Confidence            446667777888889999999999999996 55               211110                         1


Q ss_pred             CCCccc-e-EEEec-------------CCCCChHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 LSGVVV-S-AVDFG-------------SGGMTNAEVLHQVE-HGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ...++. + |||||             |.+.+..++...+. .+.+++.|..+|.++.+++.+||+.||++|||+.++++
T Consensus       198 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            234688 8 99999             55566677777774 45667778899999999999999999999999999999


Q ss_pred             HHHHHHh
Q psy1684         171 KLEDFFT  177 (189)
Q Consensus       171 ~l~~~~~  177 (189)
                      .|+.+..
T Consensus       278 ~l~~~~~  284 (291)
T 1u46_A          278 FLLEAQP  284 (291)
T ss_dssp             HHHHHC-
T ss_pred             HHHHhCc
Confidence            9987765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.55  E-value=8.5e-17  Score=121.75  Aligned_cols=113  Identities=24%  Similarity=0.386  Sum_probs=84.8

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------  105 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |+               +++...                         
T Consensus       123 ~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  202 (327)
T 3lxl_A          123 RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL  202 (327)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHh
Confidence            3556777778888999999999999999996 55               222111                         


Q ss_pred             CCCCccc-e-EEEec------CCCC--------------------C-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcc
Q psy1684         106 NLSGVVV-S-AVDFG------SGGM--------------------T-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------~~~~--------------------~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~  156 (189)
                      ....++. + |||+|      +.+.                    . ..++...+..+.+++.|..+|+++.+|+.+||+
T Consensus       203 ~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  282 (327)
T 3lxl_A          203 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWA  282 (327)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcC
Confidence            1234678 8 99999      1111                    1 134556667888888999999999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         157 KDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      .||++|||+.++++.|+.+....
T Consensus       283 ~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          283 PSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             SSGGGSCCHHHHHHHHHHC----
T ss_pred             CChhhCcCHHHHHHHHHHHHhhh
Confidence            99999999999999999887643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.55  E-value=4.8e-17  Score=124.40  Aligned_cols=144  Identities=13%  Similarity=0.046  Sum_probs=100.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+...+..+||+|++.+ +     +..                 ++. ....+....+..+..+.+.|
T Consensus       110 ~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~-----l~~-----------------~l~~~~~~l~~~~~~~i~~qi~~a  166 (348)
T 1u5q_A          110 KLRHPNTIQYRGCYLREHTAWLVMEYCLG-S-----ASD-----------------LLEVHKKPLQEVEIAAVTHGALQG  166 (348)
T ss_dssp             HCCCTTBCCEEEEEEETTEEEEEEECCSE-E-----HHH-----------------HHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEEECCeEEEEEecCCC-C-----HHH-----------------HHHHhcCCCCHHHHHHHHHHHHHH
Confidence            45677777777666555566777777642 1     111                 111 12334566667777888899


Q ss_pred             ceeeccCCcccccc-cc---------------c-----------------ccccC----CCCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------Y-----------------LVHGT----NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~-----------------l~~~~----~~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|+|+ |+               |                 +|+|.    ..+.++. + |||||      
T Consensus       167 L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el  246 (348)
T 1u5q_A          167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL  246 (348)
T ss_dssp             HHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999996 54               2                 22222    2466899 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRM-PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~-~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            |.+.+..+.+..+..+..+ ..+..+|+++.+||.+||+.||++|||+.++++.
T Consensus       247 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          247 AERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                  5666666666666555444 3456799999999999999999999999999764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.54  E-value=1.7e-16  Score=118.86  Aligned_cols=106  Identities=13%  Similarity=0.107  Sum_probs=85.0

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~  107 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |.               +++                     +|. ..
T Consensus       114 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  193 (303)
T 3a7i_A          114 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ  193 (303)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhc
Confidence            34556777778888889999999999999986 44               111                     111 34


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..++. + |||||            |.+.+..++...+..+..+..+..+|.++.+|+.+||+.||++|||+.+|++.
T Consensus       194 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            56788 9 99999            66677777777777777777888999999999999999999999999999874

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.54  E-value=1e-15  Score=114.37  Aligned_cols=104  Identities=9%  Similarity=0.016  Sum_probs=77.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc---------------------cccCCC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL---------------------VHGTNL-S  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~~~-~  108 (189)
                      .++..++..+..+.+.|+.++|..+++|+|+ |+               |+                     |+|... .
T Consensus       133 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  212 (298)
T 2zv2_A          133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSET  212 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccC
Confidence            4556677778888899999999999999996 55               22                     222211 1


Q ss_pred             C---ccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 G---VVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~---~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .   ++. + |||||            |.+.+...+...+..+ ...+.+..+|+++.+|+.+||+.||++|||+.+|++
T Consensus       213 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          213 RKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1   367 8 99999            6666666666666544 334445689999999999999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.54  E-value=1.7e-16  Score=126.30  Aligned_cols=145  Identities=12%  Similarity=0.090  Sum_probs=104.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|++.++.     +..                 ++.....++...+..+..+.+.|+
T Consensus        77 ~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~i~~qi~~al  134 (486)
T 3mwu_A           77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGE-----LFD-----------------EIIKRKRFSEHDAARIIKQVFSGI  134 (486)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCcCeEEEEEEcCCEEEEEEEcCCCCc-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            4567777777776666666677777766522     111                 222233455666777778888899


Q ss_pred             eeeccCCcccccc-cc--------------------------------------cccccCCCCCccc-e-EEEec-----
Q psy1684          85 CVNLRKPCVQVSC-RI--------------------------------------YLVHGTNLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~--------------------------------------~l~~~~~~~~~~~-s-VwsfG-----  118 (189)
                      .++|..+++|+|+ |+                                      ++|||...+.|+. + |||+|     
T Consensus       135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~  214 (486)
T 3mwu_A          135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYI  214 (486)
T ss_dssp             HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHH
Confidence            9999999999986 55                                      2223334456889 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCC-CCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYR-MPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~-~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+.+..+++..+..+.. .+.|  ..+++++.+|+.+||+.||++|||+.++++.
T Consensus       215 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          215 LLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                   777788888888876643 2222  4689999999999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.54  E-value=6.5e-17  Score=122.28  Aligned_cols=153  Identities=12%  Similarity=0.096  Sum_probs=98.2

Q ss_pred             CCCCChHHHHHHhcCCCCCCC----cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhh
Q psy1684           3 FGKIKRIEAEKKLLLPENDHG----AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYS   78 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g----~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~   78 (189)
                      ...++|+|++++++.+.....    .+||+|++.++.     +..                 ++. ...++...+..+..
T Consensus        72 l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~l~-~~~~~~~~~~~i~~  128 (322)
T 3soc_A           72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS-----LSD-----------------FLK-ANVVSWNELCHIAE  128 (322)
T ss_dssp             STTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB-----HHH-----------------HHH-HCCBCHHHHHHHHH
T ss_pred             HhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCC-----HHH-----------------HHH-hcCCCHHHHHHHHH
Confidence            346678888877765543222    367777766522     111                 222 12355666777777


Q ss_pred             hccCCceeeccC----------Ccccccc-cc---------------ccc-----------------------ccC-CC-
Q psy1684          79 KDADGLCVNLRK----------PCVQVSC-RI---------------YLV-----------------------HGT-NL-  107 (189)
Q Consensus        79 ~~a~gl~~~~~~----------~~~~~~~-p~---------------~l~-----------------------~~~-~~-  107 (189)
                      +.+.|+.++|..          +++|+|+ |+               |++                       +|. .. 
T Consensus       129 qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  208 (322)
T 3soc_A          129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA  208 (322)
T ss_dssp             HHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccc
Confidence            888888888888          9999996 54               222                       111 11 


Q ss_pred             ----CCccc-e-EEEec------------CCCC----------------ChHHHHHHHH-cCCCCCCCC-----CCCHHH
Q psy1684         108 ----SGVVV-S-AVDFG------------SGGM----------------TNAEVLHQVE-HGYRMPCPP-----GCPPRL  147 (189)
Q Consensus       108 ----~~~~~-s-VwsfG------------~~~~----------------~~~~~~~~v~-~g~~~~~p~-----~~p~~~  147 (189)
                          ..++. + |||||            |.+.                ...++...+. .+.++..+.     .+++++
T Consensus       209 ~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  288 (322)
T 3soc_A          209 INFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAML  288 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHH
T ss_pred             cccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHH
Confidence                35678 8 99999            2211                2334444443 333443332     245679


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         148 YDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       148 ~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      .+||.+||+.||++|||+.+|++.|+.+.+.
T Consensus       289 ~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          289 CETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.54  E-value=3.5e-16  Score=120.20  Aligned_cols=145  Identities=11%  Similarity=0.038  Sum_probs=103.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......|||+|++.++.     +..                 ++.....+...++..+..+++.|+
T Consensus        84 ~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~-----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~al  141 (362)
T 2bdw_A           84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGE-----LFE-----------------DIVAREFYSEADASHCIQQILESI  141 (362)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEEeCCEEEEEEecCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            3567777777766655556677777766521     111                 333344555677777888889999


Q ss_pred             eeeccCCcccccc-cc------------------ccccc--------------------C-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI------------------YLVHG--------------------T-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~------------------~l~~~--------------------~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+                  |++..                    . ....|+. + |||+|    
T Consensus       142 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  221 (362)
T 2bdw_A          142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY  221 (362)
T ss_dssp             HHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred             HHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence            9999999999996 55                  11111                    1 3346889 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCC-CCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYR-MPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~-~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+.+..++...+..+.. .+.+  ..+|+++.+|+.+||+.||++|||+.++++.
T Consensus       222 ~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          222 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                    667777788888876643 2322  3689999999999999999999999998764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.54  E-value=3.5e-16  Score=118.26  Aligned_cols=145  Identities=8%  Similarity=0.000  Sum_probs=101.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..+||+|++.++.     +..                 ++. ...+....+..+..+.+.|
T Consensus        97 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~-~~~l~~~~~~~i~~qi~~~  153 (321)
T 2c30_A           97 RDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA-----LTD-----------------IVS-QVRLNEEQIATVCEAVLQA  153 (321)
T ss_dssp             TTCCCTTBCCEEEEEEETTEEEEEECCCCSCB-----HHH-----------------HHT-TCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCcceEEEEEEECCEEEEEEecCCCCC-----HHH-----------------HHH-hcCCCHHHHHHHHHHHHHH
Confidence            35567777777666555556677777666521     111                 222 2245566777778888899


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+               |++.                     |. ....++. + |||||     
T Consensus       154 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e  233 (321)
T 2c30_A          154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE  233 (321)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHH
Confidence            99999999999996 55               2211                     11 3455888 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+.+..+....+..+..+.  .+..+|+++.+++.+||+.||++|||+.++++.
T Consensus       234 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          234 MVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   66666777777776654433  334689999999999999999999999999863

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.54  E-value=6e-15  Score=106.39  Aligned_cols=89  Identities=29%  Similarity=0.452  Sum_probs=73.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccC-----------------C-cc
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFE-----------------T-QK   62 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~-----------------g-yl   62 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++....|.|+||++.  .+.++||+|....+                 + |.
T Consensus        15 WyhG~isR~eAe~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~   90 (230)
T 2dvj_A           15 WYWGRLSRQEAVALLQ--GQRHGVFLVRDSSTSPGDYVLSVSE--NSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLR   90 (230)
T ss_dssp             SCCSSCCTTHHHHHHT--TSSSSCBEEECCSSCTTSCEEECCC--SSSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCEE
T ss_pred             cccCCCCHHHHHHHhc--CCCCceEEEEeCCCCCCCEEEEEEE--CCEEEEEEEEeCCCCcccccccccccccccceEEE
Confidence            9999999999999994  3568999999999888999999999  99999999987653                 4 44


Q ss_pred             CCCCCcC-HhHHHHHhhhccCCceeeccCCccc
Q psy1684          63 AGRTTIH-YPELVEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        63 ~~~~~~~-l~~li~~~~~~a~gl~~~~~~~~~~   94 (189)
                      .+...|. +.+||+||.....+ ...+..||..
T Consensus        91 ~~~~~F~sl~~LV~~y~~~~l~-~~~L~~Pv~~  122 (230)
T 2dvj_A           91 IGDQEFDSLPALLEFYKIHYLD-TTTLIEPVSR  122 (230)
T ss_dssp             SSSCEESSHHHHHTTSTTTCSS-SSCCCCBCCS
T ss_pred             eCCceeCCHHHHHHHHhhCccc-cccccccccc
Confidence            4567788 99999999987765 3455556543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.54  E-value=1.3e-16  Score=119.30  Aligned_cols=143  Identities=10%  Similarity=-0.013  Sum_probs=98.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+...+..+||+|++.++.     +..                 ++. ...+....+..+..+.+.|+
T Consensus        73 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~-~~~~~~~~~~~~~~qi~~~l  129 (297)
T 3fxz_A           73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGS-----LTD-----------------VVT-ETCMDEGQIAAVCRECLQAL  129 (297)
T ss_dssp             HCCCTTBCCEEEEEEETTEEEEEEECCTTCB-----HHH-----------------HHH-HSCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCeEeEEEEECCEEEEEEECCCCCC-----HHH-----------------HHh-hcCCCHHHHHHHHHHHHHHH
Confidence            3567777776665555555667777665521     111                 222 12344566677778888999


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               |++.                     |. ....++. + |||+|      
T Consensus       130 ~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  209 (297)
T 3fxz_A          130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM  209 (297)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence            9999999999996 55               2211                     11 3456888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHc-C-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEH-G-YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~-g-~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            |.+.+..+....+.. + ..+..|..++..+.+|+.+||+.||++|||++++++
T Consensus       210 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                  666666665555533 3 344567789999999999999999999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.54  E-value=6.6e-16  Score=114.93  Aligned_cols=111  Identities=21%  Similarity=0.351  Sum_probs=82.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-----------------------cC--
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT--  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~--  105 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |+               +++.                       |.  
T Consensus       116 ~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhc
Confidence            4557777888888999999999999999996 54               2221                       11  


Q ss_pred             --CCCCccc-e-EEEec------------CCCCCh-HHHHHHHHcCCCCC----CCCCCCHHHHHHHHHhcccCCCCCCC
Q psy1684         106 --NLSGVVV-S-AVDFG------------SGGMTN-AEVLHQVEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRPT  164 (189)
Q Consensus       106 --~~~~~~~-s-VwsfG------------~~~~~~-~~~~~~v~~g~~~~----~p~~~p~~~~~l~~~C~~~~p~~RP~  164 (189)
                        ....++. + |||+|            |.+.+. .++...+..+...+    .+..+|+++.+|+.+||+.||++|||
T Consensus       196 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  275 (289)
T 3og7_A          196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPS  275 (289)
T ss_dssp             ----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCC
Confidence              1456888 9 99999            555443 45555566554433    23579999999999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q psy1684         165 FETLQWKLEDFFT  177 (189)
Q Consensus       165 ~~~i~~~l~~~~~  177 (189)
                      +.+|++.|+.+.+
T Consensus       276 ~~ell~~L~~l~~  288 (289)
T 3og7_A          276 FPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.54  E-value=3.1e-16  Score=118.84  Aligned_cols=143  Identities=17%  Similarity=0.097  Sum_probs=97.7

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      ++|+|++++++.+......+||+|++..+.     +..                 ++.....++..++..+..+.+.|+.
T Consensus        71 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~al~  128 (326)
T 2y0a_A           71 IQHPNVITLHEVYENKTDVILILELVAGGE-----LFD-----------------FLAEKESLTEEEATEFLKQILNGVY  128 (326)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCB-----HHH-----------------HHTTSSCCBHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcEEEEEEeCCEEEEEEEcCCCCC-----HHH-----------------HHHhcCCcCHHHHHHHHHHHHHHHH
Confidence            445555555554444444555555554411     111                 4444445566777788888899999


Q ss_pred             eeccCCcccccc-cccc-------------------cc--------------------cC-CCCCccc-e-EEEec----
Q psy1684          86 VNLRKPCVQVSC-RIYL-------------------VH--------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~~l-------------------~~--------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      ++|..+++|+|+ |+.+                   +.                    |. ....++. + |||+|    
T Consensus       129 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  208 (326)
T 2y0a_A          129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY  208 (326)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred             HHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHH
Confidence            999999999996 5511                   11                    10 3356888 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCC-C--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRM-P--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~-~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+.+..+++..+..+... +  .+..+|.++.+|+.+||+.||++|||+.++++
T Consensus       209 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          209 ILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    6666677777777554322 1  12578999999999999999999999999986

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.53  E-value=1.8e-14  Score=99.62  Aligned_cols=88  Identities=27%  Similarity=0.312  Sum_probs=71.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCe---eeEEEEEe---c-cC---C-ccCCCCCcC
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC---LKMTTGRS---L-FE---T-QKAGRTTIH   69 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~---v~h~~i~~---~-~~---g-yl~~~~~~~   69 (189)
                      ||||.|+|.+|+++|......+|+||||++ +.+|.|+||++.  .+.   ++||+|..   . .+   | |..+...|.
T Consensus        14 Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~--~~~~~~v~H~~I~~~~~~~~g~~~~~~~~~~~~F~   90 (174)
T 3qwx_X           14 FYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVRE--ADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFP   90 (174)
T ss_dssp             GEETTCCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEEC--CSSSSCEEEEEEEECCCCTTSSSCCCEEETTEEES
T ss_pred             CccCCCCHHHHHHHHhccCCCCCeEEEEec-CCCCCEEEEEEE--CCCCCceEEEEEEeccCCCCCcccceEEECCeecC
Confidence            999999999999999765667899999999 888999999999  888   99999987   3 33   5 444577888


Q ss_pred             -HhHHHHHhhhccCCceeeccCCc
Q psy1684          70 -YPELVEHYSKDADGLCVNLRKPC   92 (189)
Q Consensus        70 -l~~li~~~~~~a~gl~~~~~~~~   92 (189)
                       +.+|++++..... +...+..|+
T Consensus        91 sl~eLv~~y~~~~~-~~~~L~~P~  113 (174)
T 3qwx_X           91 DIPALLNHFKMRVL-TEASLLAAY  113 (174)
T ss_dssp             SHHHHHHHTTSSCS-SSCCCCEEC
T ss_pred             cHHHHhhhhhcCcc-ccccccccc
Confidence             9999999987764 444444444

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.53  E-value=4.7e-16  Score=118.44  Aligned_cols=144  Identities=7%  Similarity=-0.041  Sum_probs=100.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.....+..|||+|++++ |++    ..                 ++.....+.......+..+++.|+
T Consensus        61 ~l~hp~iv~l~~~~~~~~~~~lv~E~~~g-g~L----~~-----------------~l~~~~~~~~~~~~~~~~qi~~aL  118 (337)
T 1o6l_A           61 NTRHPFLTALKYAFQTHDRLCFVMEYANG-GEL----FF-----------------HLSRERVFTEERARFYGAEIVSAL  118 (337)
T ss_dssp             SCCCTTBCCEEEEEECSSEEEEEEECCTT-CBH----HH-----------------HHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCcCcceEEEEEeCCEEEEEEeCCCC-CcH----HH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            34566666666555555556666666654 211    11                 232233455566666777888899


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|||+ |+               |+++                     |. ....|+. + |||+|      
T Consensus       119 ~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  198 (337)
T 1o6l_A          119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  198 (337)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred             HHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHH
Confidence            9999999999996 55               3332                     22 3456888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQWK  171 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~~  171 (189)
                            |.+.+..++...+..+ .+..|..+++++.+|+.+||+.||++||     ++++|++.
T Consensus       199 l~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          199 MCGRLPFYNQDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             hcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence                  6666777777777655 3556788999999999999999999999     89988763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.53  E-value=1e-16  Score=118.43  Aligned_cols=151  Identities=9%  Similarity=0.014  Sum_probs=102.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......++|+|++..+.     +..                 ++.....++..++..+..+.+.|+
T Consensus        62 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~i~~~i~~~l  119 (277)
T 3f3z_A           62 SLDHPNIIRLYETFEDNTDIYLVMELCTGGE-----LFE-----------------RVVHKRVFRESDAARIMKDVLSAV  119 (277)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEEECCCSCB-----HHH-----------------HHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEecCCeEEEEEeccCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4566666666665555555566666655411     111                 222233455666777778888899


Q ss_pred             eeeccCCcccccc-ccccc--------------------------------------ccCCCCCccc-e-EEEec-----
Q psy1684          85 CVNLRKPCVQVSC-RIYLV--------------------------------------HGTNLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~l~--------------------------------------~~~~~~~~~~-s-VwsfG-----  118 (189)
                      .++|..+++|+|+ |+.+.                                      +|...+.++. + |||+|     
T Consensus       120 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~  199 (277)
T 3f3z_A          120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYV  199 (277)
T ss_dssp             HHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHH
T ss_pred             HHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHH
Confidence            9999999999986 54221                                      1112344788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHH--HHHHHHh
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQW--KLEDFFT  177 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~--~l~~~~~  177 (189)
                             |.+.+..++...+..+.....+   ..+|+++.+|+.+||+.||++|||+.++++  .++..+.
T Consensus       200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          200 LLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence                   7777778888888776433222   278999999999999999999999999986  3554443

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.53  E-value=5.7e-16  Score=119.01  Aligned_cols=144  Identities=15%  Similarity=0.053  Sum_probs=101.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++........+||+|+++++.     +..                 ++.....++..++..+..+++.|+
T Consensus        71 ~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~-----L~~-----------------~l~~~~~l~~~~~~~i~~qi~~aL  128 (361)
T 2yab_A           71 QVLHPNIITLHDVYENRTDVVLILELVSGGE-----LFD-----------------FLAQKESLSEEEATSFIKQILDGV  128 (361)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEEECCCSCB-----HHH-----------------HHTTCSCCBHHHHHHHHHHHHHHH
T ss_pred             hCCCcCCCcEEEEEEeCCEEEEEEEcCCCCc-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            4556666666655544445566666655421     111                 444444566777778888899999


Q ss_pred             eeeccCCcccccc-cccc-------------------cc--------------------cC-CCCCccc-e-EEEec---
Q psy1684          85 CVNLRKPCVQVSC-RIYL-------------------VH--------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~l-------------------~~--------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      .++|..+++|+|+ |+.+                   +.                    |. ....|+. + |||+|   
T Consensus       129 ~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil  208 (361)
T 2yab_A          129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT  208 (361)
T ss_dssp             HHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHH
Confidence            9999999999996 5521                   11                    00 3456889 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~---~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..+++..+..+....   .+..+++++.+|+.+||..||++|||+.++++
T Consensus       209 ~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          209 YILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                     67777788888886664221   22578999999999999999999999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.53  E-value=3e-16  Score=120.09  Aligned_cols=104  Identities=10%  Similarity=-0.054  Sum_probs=82.9

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc------------------ccC-CCCCc
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV------------------HGT-NLSGV  110 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~------------------~~~-~~~~~  110 (189)
                      ..++...+..+..+++.|+.++|..+++|+|+ |+               |++                  +|. ....+
T Consensus       136 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~  215 (350)
T 1rdq_E          136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGY  215 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCB
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCC
Confidence            34556666777788889999999999999996 55               222                  221 44568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQW  170 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~  170 (189)
                      +. + |||+|            |.+.+..++...+..+. +..|..+++++.+|+.+||+.||++||+     +++|++
T Consensus       216 ~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            89 9 99999            66777788888887773 5678899999999999999999999998     788765

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.53  E-value=3.8e-16  Score=123.05  Aligned_cols=144  Identities=8%  Similarity=-0.059  Sum_probs=102.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+...+..+||+|++.+ +.+    ..                 ++.....++...+..+..+++.|
T Consensus       203 ~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~-~~L----~~-----------------~l~~~~~~~~~~~~~~~~qi~~a  260 (446)
T 4ejn_A          203 QNSRHPFLTALKYSFQTHDRLCFVMEYANG-GEL----FF-----------------HLSRERVFSEDRARFYGAEIVSA  260 (446)
T ss_dssp             CCCSCTTSCCEEEEEEETTEEEEEECCCSS-CBH----HH-----------------HHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCeEeeEEEEEeeCCEEEEEEeeCCC-CcH----HH-----------------HHHhcCCCCHHHHHHHHHHHHHH
Confidence            345666666666655555556666666655 211    11                 23223345566677777888999


Q ss_pred             ceeecc-CCcccccc-cc---------------cccccC----------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLR-KPCVQVSC-RI---------------YLVHGT----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~-~~~~~~~~-p~---------------~l~~~~----------------------~~~~~~~-s-VwsfG----  118 (189)
                      +.++|. .+++|+|+ |+               |+++..                      ....|+. + |||||    
T Consensus       261 L~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  340 (446)
T 4ejn_A          261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY  340 (446)
T ss_dssp             HHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred             HHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHH
Confidence            999998 89999996 55               333221                      3456889 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                              |.+.+..++...+..+. +..|..+++++.+|+.+||+.||++||     +++++++
T Consensus       341 ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          341 EMMCGRLPFYNQDHEKLFELILMEE-IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                    67777777777775543 456788999999999999999999999     9999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.53  E-value=2.6e-17  Score=123.38  Aligned_cols=151  Identities=12%  Similarity=0.141  Sum_probs=98.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC---CCCCcCHhHHHHHhhhcc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA---GRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~---~~~~~~l~~li~~~~~~a   81 (189)
                      .++|+|++++++.+...+..+||++++.++.     +..                 ++.   ....+....+..+..+.+
T Consensus        86 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~i~~~i~  143 (307)
T 2nru_A           86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGS-----LLD-----------------RLSCLDGTPPLSWHMRCKIAQGAA  143 (307)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHH-----------------HHHTGGGCCCCCHHHHHHHHHHHH
T ss_pred             hcCCCCeEEEEEEEecCCceEEEEEecCCCc-----HHH-----------------HHHhccCCCCCCHHHHHHHHHHHH
Confidence            4567888887777766667788888776522     111                 111   122344666777778888


Q ss_pred             CCceeeccCCcccccc-cc---------------ccc-----------------------ccCCCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLV-----------------------HGTNLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..+++|+|+ |+               +++                       +|...+.++. + |||||  
T Consensus       144 ~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~i  223 (307)
T 2nru_A          144 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVV  223 (307)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHH
T ss_pred             HHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHH
Confidence            9999999999999986 54               111                       1112334788 8 99999  


Q ss_pred             ----------CCCCCh----HHHHHHHHcC----------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 ----------SGGMTN----AEVLHQVEHG----------YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 ----------~~~~~~----~~~~~~v~~g----------~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                                |.+.+.    ..+...+...          .....+..++..+.+++.+||+.||++|||+.+|++.|++
T Consensus       224 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~  303 (307)
T 2nru_A          224 LLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE  303 (307)
T ss_dssp             HHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence                      333221    1222222211          1122344566789999999999999999999999999998


Q ss_pred             HHh
Q psy1684         175 FFT  177 (189)
Q Consensus       175 ~~~  177 (189)
                      +.+
T Consensus       304 l~~  306 (307)
T 2nru_A          304 MTA  306 (307)
T ss_dssp             HC-
T ss_pred             Hhc
Confidence            754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.53  E-value=2.1e-16  Score=126.33  Aligned_cols=145  Identities=13%  Similarity=0.080  Sum_probs=103.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|++.++.     +..                 ++.....++......+..+.+.|+
T Consensus       102 ~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~-----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~~l  159 (504)
T 3q5i_A          102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE-----LFE-----------------QIINRHKFDECDAANIMKQILSGI  159 (504)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEEECCTTCB-----HHH-----------------HHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEEcCCEEEEEEecCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4567777777766655555677777766521     111                 222233455666777788888999


Q ss_pred             eeeccCCcccccc-ccc--------------------------------------ccccCCCCCccc-e-EEEec-----
Q psy1684          85 CVNLRKPCVQVSC-RIY--------------------------------------LVHGTNLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~--------------------------------------l~~~~~~~~~~~-s-VwsfG-----  118 (189)
                      .++|..+++|+|+ |+.                                      +|||...+.|+. + |||+|     
T Consensus       160 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~  239 (504)
T 3q5i_A          160 CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYI  239 (504)
T ss_dssp             HHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHH
Confidence            9999999999986 551                                      111113356889 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCC-CC--CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRM-PC--PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~-~~--p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+.+..+++..+..+... +.  ...+++++.+|+.+||+.||++|||+.++++.
T Consensus       240 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          240 LLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                   7788888898888777432 21  15789999999999999999999999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.53  E-value=4e-16  Score=120.88  Aligned_cols=146  Identities=15%  Similarity=0.108  Sum_probs=104.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||+|++.++.     +..                 ++... ..++..++..+..+++.
T Consensus       103 ~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~-----L~~-----------------~l~~~~~~l~~~~~~~i~~qi~~  160 (387)
T 1kob_A          103 NQLHHPKLINLHDAFEDKYEMVLILEFLSGGE-----LFD-----------------RIAAEDYKMSEAEVINYMRQACE  160 (387)
T ss_dssp             TTCCSTTBCCEEEEEECSSEEEEEEECCCCCB-----HHH-----------------HTTCTTCCBCHHHHHHHHHHHHH
T ss_pred             HhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCc-----HHH-----------------HHHhhcCCCCHHHHHHHHHHHHH
Confidence            45677777777776665666777777776522     111                 23322 24557777888889999


Q ss_pred             CceeeccCCcccccc-cccc-----------------cc--------------------cC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RIYL-----------------VH--------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~l-----------------~~--------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |+.+                 +.                    |. ....++. + |||+|   
T Consensus       161 aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  240 (387)
T 1kob_A          161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG  240 (387)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHH
Confidence            999999999999996 5521                 11                    11 3456888 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYR---MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~---~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                               |.+.+..+.+..+..+..   .+.+..+|+++.+|+.+||+.||++|||+.++++.
T Consensus       241 ~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          241 YVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                     677777777777765532   22335789999999999999999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=2.4e-16  Score=119.25  Aligned_cols=145  Identities=10%  Similarity=-0.041  Sum_probs=103.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+...+..+||+|++++ ++    +..                 ++... ..++..++..+..+.+.|
T Consensus        57 ~l~hpnIv~~~~~~~~~~~~~lv~e~~~g-~~----L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~a  114 (321)
T 1tki_A           57 IARHRNILHLHESFESMEELVMIFEFISG-LD----IFE-----------------RINTSAFELNEREIVSYVHQVCEA  114 (321)
T ss_dssp             HSCCTTBCCEEEEEEETTEEEEEECCCCC-CB----HHH-----------------HHTSSSCCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEeEEEecCCEEEEEEEeCCC-CC----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            35677777777766555667777777665 21    111                 23222 245567777888899999


Q ss_pred             ceeeccCCcccccc-cccc-----------------c--------------------ccC-CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RIYL-----------------V--------------------HGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~l-----------------~--------------------~~~-~~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+.+                 +                    +|. ....++. + |||+|    
T Consensus       115 l~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  194 (321)
T 1tki_A          115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY  194 (321)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHH
Confidence            99999999999996 5521                 1                    111 3344788 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPC---PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~---p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+.+..++...+..+.....   ...+|.++.+|+.+||..||++|||+.|+++.
T Consensus       195 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          195 VLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                    667777888888876643322   24789999999999999999999999999873

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.52  E-value=3.7e-15  Score=113.94  Aligned_cols=116  Identities=11%  Similarity=0.036  Sum_probs=83.1

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------cccccC----------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------YLVHGT----------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------~l~~~~----------------------  105 (189)
                      ..++..++..+..+.+.|+.++|..+++|+|+ |+                 +++...                      
T Consensus       154 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~  233 (352)
T 2jii_A          154 HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLE  233 (352)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCcc
Confidence            34567778888899999999999999999996 54                 222110                      


Q ss_pred             -------CCCCccc-e-EEEec------------CCCC--ChHHHHHHHH--cCCCCCCC------CCCCHHHHHHHHHh
Q psy1684         106 -------NLSGVVV-S-AVDFG------------SGGM--TNAEVLHQVE--HGYRMPCP------PGCPPRLYDIMLEC  154 (189)
Q Consensus       106 -------~~~~~~~-s-VwsfG------------~~~~--~~~~~~~~v~--~g~~~~~p------~~~p~~~~~l~~~C  154 (189)
                             ....++. + |||||            |.+.  +...+.....  .....+.+      ..+|+++.+|+.+|
T Consensus       234 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  313 (352)
T 2jii_A          234 FISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVV  313 (352)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHH
T ss_pred             ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHH
Confidence                   3346788 9 99999            4333  2333333322  11222222      24689999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHHHhhcCC
Q psy1684         155 WLKDPVKRPTFETLQWKLEDFFTMEGS  181 (189)
Q Consensus       155 ~~~~p~~RP~~~~i~~~l~~~~~~~~~  181 (189)
                      |+.||++|||+++|++.|+.+++..+.
T Consensus       314 l~~dp~~Rps~~~l~~~L~~~~~~~~~  340 (352)
T 2jii_A          314 MALTYEEKPPYAMLRNNLEALLQDLRV  340 (352)
T ss_dssp             HTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999986543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.51  E-value=4.5e-16  Score=115.36  Aligned_cols=144  Identities=10%  Similarity=0.040  Sum_probs=97.1

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      ++|+|++++++.+......++|+|++..+.     +..                 ++.....++..++..+..+.+.|+.
T Consensus        62 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~-----l~~-----------------~~~~~~~~~~~~~~~~~~~i~~~l~  119 (284)
T 3kk8_A           62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGE-----LFE-----------------DIVAREFYSEADASHCIQQILESIA  119 (284)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcCeEEEEEEcCCEEEEEEecCCCCC-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            456666666555544444566666555411     101                 2222334556666777788888999


Q ss_pred             eeccCCcccccc-cccc--------------------------------------cccC-CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RIYL--------------------------------------VHGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~~l--------------------------------------~~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|+|+ |+.+                                      ++|. ....++. + |||+|     
T Consensus       120 ~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  199 (284)
T 3kk8_A          120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI  199 (284)
T ss_dssp             HHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHH
Confidence            999999999986 4411                                      1111 3445788 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGY-RMPCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~-~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+.+..++...+..+. ..+.|  ..+|+++.+|+.+||+.||++|||+.++++.
T Consensus       200 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          200 LLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                   66777777777776553 23322  4789999999999999999999999999873

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.51  E-value=4.7e-16  Score=126.84  Aligned_cols=143  Identities=10%  Similarity=-0.082  Sum_probs=102.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|+++++......+..|||+|++++ |++    ..                 +|.....++......+..++..|+
T Consensus       248 ~~~HP~IV~l~~~f~~~~~lylVmEy~~G-GdL----~~-----------------~l~~~~~l~E~~a~~y~~qIl~aL  305 (689)
T 3v5w_A          248 TGDCPFIVCMSYAFHTPDKLSFILDLMNG-GDL----HY-----------------HLSQHGVFSEADMRFYAAEIILGL  305 (689)
T ss_dssp             SSCCTTBCCEEEEEECSSEEEEEECCCCS-CBH----HH-----------------HHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeEEEEEEEECCEEEEEEecCCC-CcH----HH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45678888877766666677888888776 321    11                 233234566566667788889999


Q ss_pred             eeeccCCcccccc-cc---------------cc-------------------cccC-C-CCCccc-e-EEEec-------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YL-------------------VHGT-N-LSGVVV-S-AVDFG-------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l-------------------~~~~-~-~~~~~~-s-VwsfG-------  118 (189)
                      .|+|..+|+|||+ |+               |+                   |||. . ...|+. + |||+|       
T Consensus       306 ~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmL  385 (689)
T 3v5w_A          306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL  385 (689)
T ss_dssp             HHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999996 66               33                   3332 3 346999 9 99999       


Q ss_pred             -----CCCC---ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q psy1684         119 -----SGGM---TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQW  170 (189)
Q Consensus       119 -----~~~~---~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~  170 (189)
                           |.+.   +..++...+..+ .+..|..+++++.+|+.+|+..||++|++     ++||++
T Consensus       386 tG~~PF~~~~~~~~~~i~~~i~~~-~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          386 RGHSPFRQHKTKDKHEIDRMTLTM-AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HSSCTTCGGGCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             hCCCCCCCCChHHHHHHHHhhcCC-CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                 4332   234555555444 45678899999999999999999999998     577765

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.51  E-value=2e-14  Score=107.75  Aligned_cols=89  Identities=29%  Similarity=0.461  Sum_probs=74.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEec-----------------cCC-cc
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSL-----------------FET-QK   62 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~-----------------~~g-yl   62 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+..|.|+||++.  .+.++||+|.+.                 .+| |.
T Consensus        13 WyhG~isR~eAe~lL~--~~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (304)
T 2eyz_A           13 WYWGRLSRQEAVALLQ--GQRHGVFLVRDSSTSPGDYVLSVSE--NSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLR   88 (304)
T ss_dssp             SCCCCCCSSHHHHTTT--TCCSSCEECCSCCSSSSCCEEEECS--SSSCEEEECCCCSSCCSSCCCCCCCSSSSSCCCCC
T ss_pred             CccCCCCHHHHHHHhc--CCCCCEEEEEeCCCCCCCEEEEEEE--CCEEEEEEEeeccccccccccccccccccCCCeEE
Confidence            9999999999999984  4578999999999888999999999  999999999873                 455 66


Q ss_pred             CCCCCcC-HhHHHHHhhhccCCceeeccCCccc
Q psy1684          63 AGRTTIH-YPELVEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        63 ~~~~~~~-l~~li~~~~~~a~gl~~~~~~~~~~   94 (189)
                      .+...|. +.+||+||..+..+ ...+..||..
T Consensus        89 ~~~~~F~sl~~LV~~y~~~~l~-~~~L~~P~~~  120 (304)
T 2eyz_A           89 IGDQEFDSLPALLEFYKIHYLD-TTTLIEPVSR  120 (304)
T ss_dssp             BTTBCCSCHHHHHTTTTTSCCS-SSSSCCBCCS
T ss_pred             eCCcEECCHHHHHHHhhhCccc-cceecccccc
Confidence            6677888 99999999988765 4455566544

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.51  E-value=5.2e-17  Score=123.95  Aligned_cols=116  Identities=9%  Similarity=-0.024  Sum_probs=80.7

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------ccccc------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------YLVHG------------------  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------~l~~~------------------  104 (189)
                      ++.....++..++..+..+.+.|+.++|..+++|+|+ |+                 |+++.                  
T Consensus       141 ~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~  220 (345)
T 2v62_A          141 ISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGH  220 (345)
T ss_dssp             HCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCS
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhcccccc
Confidence            5554445667888888899999999999999999996 54                 22210                  


Q ss_pred             ----------C-CCCCccc-e-EEEec------------CCCC-ChHHHHHHHHcCCCCCCC---------CCCCHHHHH
Q psy1684         105 ----------T-NLSGVVV-S-AVDFG------------SGGM-TNAEVLHQVEHGYRMPCP---------PGCPPRLYD  149 (189)
Q Consensus       105 ----------~-~~~~~~~-s-VwsfG------------~~~~-~~~~~~~~v~~g~~~~~p---------~~~p~~~~~  149 (189)
                                . ....++. + |||||            |.+. ...........+.....|         ..+|+++.+
T Consensus       221 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  300 (345)
T 2v62_A          221 NGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQ  300 (345)
T ss_dssp             CSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHH
T ss_pred             CCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHH
Confidence                      0 2335788 9 99999            4221 122222222222112222         279999999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         150 IMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       150 l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                      |+.+||+.||++|||+.+|++.|+.+.
T Consensus       301 li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          301 FLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            999999999999999999999997654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.50  E-value=1e-15  Score=116.11  Aligned_cols=47  Identities=17%  Similarity=0.299  Sum_probs=39.2

Q ss_pred             cCCCCCCCCCCC------HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         133 HGYRMPCPPGCP------PRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       133 ~g~~~~~p~~~p------~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      .+.++..|..++      +++.+||.+||+.||++|||++++++.|+.++..-
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          268 EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            445666666544      48999999999999999999999999999998753

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.50  E-value=4.1e-14  Score=102.76  Aligned_cols=90  Identities=26%  Similarity=0.356  Sum_probs=76.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      ||||.|++.+|+++|.... .+|+||||++. .+|.|+||++.  .+.++|++|...++.|+.+...|. +.+||+||.+
T Consensus       124 Wyhg~isr~~Ae~lL~~~~-~~G~FLVR~s~-~~g~y~Lsv~~--~~~v~H~~I~~~~~~~~~~~~~F~sL~~Lv~~y~~  199 (246)
T 4fbn_A          124 WYHASLTRAQAEHMLMRVP-RDGAFLVRKRN-EPNSYAISFRA--EGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEK  199 (246)
T ss_dssp             TEESSCCHHHHHHHHHTSC-CTTEEEEEECS-STTEEEEEEEE--TTEEEEEEEEEETTEEEETTEEESCHHHHHHHHHH
T ss_pred             eeecCccHHHHHHHHhhCC-CCCeEEEEecC-CCCCEEEEEEe--CCCeEEEEEEeCCCEEEeCCCccCCHHHHHHHhCc
Confidence            9999999999999995443 47999999984 46899999999  999999999865333777777898 9999999999


Q ss_pred             ccCCceeeccCCccc
Q psy1684          80 DADGLCVNLRKPCVQ   94 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~   94 (189)
                      ...++...+..||..
T Consensus       200 ~p~~~~~~L~~Pv~~  214 (246)
T 4fbn_A          200 HPLYRKMKLRYPINE  214 (246)
T ss_dssp             SCSBTTBCCCEECSH
T ss_pred             CCCCCCcCCCCcCCC
Confidence            999888888877743

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.50  E-value=1.1e-15  Score=114.50  Aligned_cols=143  Identities=14%  Similarity=0.039  Sum_probs=96.4

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      ++|+|++++++.+......++|+|++.++.     +..                 ++.....+....+..+..+.+.|+.
T Consensus        63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~~l~  120 (304)
T 2jam_A           63 IKHENIVTLEDIYESTTHYYLVMQLVSGGE-----LFD-----------------RILERGVYTEKDASLVIQQVLSAVK  120 (304)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeeehhhhcccCCEEEEEEEcCCCcc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            455666665555444445566666554411     111                 2222334455666667778888999


Q ss_pred             eeccCCcccccc-cccc-------------------------------------cccC-CCCCccc-e-EEEec------
Q psy1684          86 VNLRKPCVQVSC-RIYL-------------------------------------VHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~~l-------------------------------------~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      ++|..+++|+|+ |+.+                                     ++|. ....++. + |||+|      
T Consensus       121 ~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  200 (304)
T 2jam_A          121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYIL  200 (304)
T ss_dssp             HHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHH
Confidence            999999999885 5421                                     1111 3455888 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRM---PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~---~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            |.+.+..++...+.++...   +.+..+|+++.+|+.+||+.||++|||+.++++
T Consensus       201 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          201 LCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                  6666777787788766422   234678999999999999999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.50  E-value=1.4e-15  Score=116.34  Aligned_cols=144  Identities=9%  Similarity=-0.045  Sum_probs=98.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|++.++.     +..                 ++.....++..++..+..+.+.|+
T Consensus       104 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~~L  161 (349)
T 2w4o_A          104 RLSHPNIIKLKEIFETPTEISLVLELVTGGE-----LFD-----------------RIVEKGYYSERDAADAVKQILEAV  161 (349)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHTTCSSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCcceeeeEecCCeEEEEEEeCCCCC-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            3567777777666655555677777665421     111                 344344556677777888889999


Q ss_pred             eeeccCCcccccc-cccccc--------------------------------------cC-CCCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RIYLVH--------------------------------------GT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~l~~--------------------------------------~~-~~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+.+.-                                      |. ....++. + |||||    
T Consensus       162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  241 (349)
T 2w4o_A          162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITY  241 (349)
T ss_dssp             HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred             HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHH
Confidence            9999999999996 552111                                      11 3446888 9 99999    


Q ss_pred             --------CCCCCh-HHHHHHHHcCCCC---CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTN-AEVLHQVEHGYRM---PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~-~~~~~~v~~g~~~---~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+... ..+...+..+...   +....+|.++.+|+.+||+.||++|||+.++++
T Consensus       242 ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          242 ILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                    444443 3355566554322   223578999999999999999999999999886

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.50  E-value=6.3e-16  Score=114.66  Aligned_cols=144  Identities=10%  Similarity=0.031  Sum_probs=98.3

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+......++|+|+... +    ++..                 ++.....++...+..+..+.+.|+
T Consensus        70 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~~~qi~~~l  127 (284)
T 2vgo_A           70 HLRHPNILRMYNYFHDRKRIYLMLEFAPR-G----ELYK-----------------ELQKHGRFDEQRSATFMEELADAL  127 (284)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEECCCTT-E----EHHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEeeEEEEEEcCCEEEEEEEeCCC-C----cHHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            34566666655554444455566665543 1    1111                 233233455666777778888999


Q ss_pred             eeeccCCcccccc-cc---------------ccc-------------------ccC-CCCCccc-e-EEEec--------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV-------------------HGT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~-------------------~~~-~~~~~~~-s-VwsfG--------  118 (189)
                      .++|..+++|+|+ |+               +++                   +|. ....++. + |||||        
T Consensus       128 ~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  207 (284)
T 2vgo_A          128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV  207 (284)
T ss_dssp             HHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH
Confidence            9999999999986 54               111                   111 3455788 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                          |.+.+..+....+..+ ....|..++.++.+|+.+||+.||++|||+.++++.
T Consensus       208 g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          208 GMPPFDSPSHTETHRRIVNV-DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             SSCTTCCSSHHHHHHHHHTT-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             CCCCCCCCCHhHHHHHHhcc-ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence                6666666666666554 355778899999999999999999999999999873

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.50  E-value=1.2e-15  Score=115.26  Aligned_cols=143  Identities=10%  Similarity=-0.030  Sum_probs=101.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++........|||+|++.++.     +..                 ++.....++......+..+++.|+
T Consensus        62 ~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~-----L~~-----------------~l~~~~~~~~~~~~~~~~qi~~aL  119 (318)
T 1fot_A           62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGE-----LFS-----------------LLRKSQRFPNPVAKFYAAEVCLAL  119 (318)
T ss_dssp             SCCBTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHHTSSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCceEeEEEEeCCEEEEEEeCCCCCC-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            4566777776665555555667777666521     111                 333334455556666778888999


Q ss_pred             eeeccCCcccccc-cc---------------cccc------------------cC-CCCCccc-e-EEEec---------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH------------------GT-NLSGVVV-S-AVDFG---------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~------------------~~-~~~~~~~-s-VwsfG---------  118 (189)
                      .++|..+++|+|+ |+               |++.                  |. ....|+. + |||+|         
T Consensus       120 ~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  199 (318)
T 1fot_A          120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG  199 (318)
T ss_dssp             HHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             HHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhC
Confidence            9999999999996 55               2221                  11 3456888 9 99999         


Q ss_pred             ---CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 ---SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 ---~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                         |.+.+..++...+..+. +..|..+++++.+|+.+|+..||++||     ++.+|++
T Consensus       200 ~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          200 YTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             SCTTCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence               66667777777776653 556788999999999999999999999     8888875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.50  E-value=6.3e-16  Score=114.87  Aligned_cols=106  Identities=12%  Similarity=0.021  Sum_probs=80.4

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cccc--------------------------------------cccCC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL--------------------------------------VHGTN  106 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l--------------------------------------~~~~~  106 (189)
                      ..++..++..+..+.+.|+.++|..+++|+|+ |..+                                      ++|..
T Consensus       116 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  195 (287)
T 2wei_A          116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL  195 (287)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHh
Confidence            34556667777888889999999999999986 4411                                      11112


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC-CCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM-PCP--PGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~-~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      .+.++. + |||||            |.+.+..++...+..+... +.|  ..+|+++.+++.+||+.||++|||+.+++
T Consensus       196 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  275 (287)
T 2wei_A          196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL  275 (287)
T ss_dssp             TTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHh
Confidence            345788 9 99999            6777777888888766432 222  57899999999999999999999999998


Q ss_pred             HH
Q psy1684         170 WK  171 (189)
Q Consensus       170 ~~  171 (189)
                      +.
T Consensus       276 ~h  277 (287)
T 2wei_A          276 EH  277 (287)
T ss_dssp             HS
T ss_pred             cC
Confidence            73

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.50  E-value=5.6e-16  Score=115.81  Aligned_cols=143  Identities=11%  Similarity=0.011  Sum_probs=97.9

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCCc
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~gl   84 (189)
                      +.|+|++++++.+......++|+|++.. +    ++..                 ++.. ...++...+..+..+.+.|+
T Consensus        73 l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~----~l~~-----------------~~~~~~~~~~~~~~~~~~~~i~~~l  130 (302)
T 2j7t_A           73 CDHPYIVKLLGAYYHDGKLWIMIEFCPG-G----AVDA-----------------IMLELDRGLTEPQIQVVCRQMLEAL  130 (302)
T ss_dssp             CCCTTBCCEEEEEECC-CEEEEEECCTT-E----EHHH-----------------HHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEeeeeeeeeeCCeEEEEEEeCCC-C----cHHH-----------------HHHhhccCCCHHHHHHHHHHHHHHH
Confidence            4566666666655555556666666554 2    1111                 2211 23355667777788889999


Q ss_pred             eeeccCCcccccc-cc---------------c---------------------ccccC------CCCCccc-e-EEEec-
Q psy1684          85 CVNLRKPCVQVSC-RI---------------Y---------------------LVHGT------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~---------------------l~~~~------~~~~~~~-s-VwsfG-  118 (189)
                      .++|..+++|+|+ |+               +                     +++|.      ....++. + ||||| 
T Consensus       131 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~  210 (302)
T 2j7t_A          131 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI  210 (302)
T ss_dssp             HHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHH
T ss_pred             HHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHH
Confidence            9999999999986 54               1                     12221      2456888 9 99999 


Q ss_pred             -----------CCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRM--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                 |.+.+..+....+..+..+  ..|..+|.++.+|+.+||+.||++|||+.++++
T Consensus       211 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                       6666666666666555433  346678999999999999999999999999875

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.49  E-value=4.1e-16  Score=115.86  Aligned_cols=144  Identities=13%  Similarity=0.084  Sum_probs=98.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC----CCCCcCHhHHHHHhhhc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA----GRTTIHYPELVEHYSKD   80 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~----~~~~~~l~~li~~~~~~   80 (189)
                      .++|+|++++++.+......++|+|++..+.     +..                 ++.    ....+....+..+..+.
T Consensus        76 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~i~~qi  133 (285)
T 3is5_A           76 SLDHPNIIKIFEVFEDYHNMYIVMETCEGGE-----LLE-----------------RIVSAQARGKALSEGYVAELMKQM  133 (285)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEECCCSCCB-----HHH-----------------HHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             hCCCchHHhHHHheecCCeEEEEEEeCCCCc-----HHH-----------------HHHhhhhcccCCCHHHHHHHHHHH
Confidence            4567777777766655556677777766522     111                 111    12334466677777888


Q ss_pred             cCCceeeccCCcccccc-cccc--------------------------------------cccCCCCCccc-e-EEEec-
Q psy1684          81 ADGLCVNLRKPCVQVSC-RIYL--------------------------------------VHGTNLSGVVV-S-AVDFG-  118 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~~l--------------------------------------~~~~~~~~~~~-s-VwsfG-  118 (189)
                      +.|+.++|..+++|+|+ |+.+                                      ++|...+.++. + |||+| 
T Consensus       134 ~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~  213 (285)
T 3is5_A          134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGV  213 (285)
T ss_dssp             HHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHH
Confidence            89999999999999986 5411                                      11113355788 9 99999 


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                 |.+.+..++...+..+....  .....++++.+|+.+||+.||++|||+.|+++
T Consensus       214 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          214 VMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                       77777777776665443221  22347899999999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.49  E-value=3.8e-16  Score=115.65  Aligned_cols=142  Identities=11%  Similarity=0.094  Sum_probs=96.3

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC----CCcCHhHHHHHhhhccC
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR----TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~----~~~~l~~li~~~~~~a~   82 (189)
                      .|+|++++++.+...+..+||+|+++.+.     +..                 ++...    ..++...+..+..+.+.
T Consensus        69 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~i~~qi~~  126 (289)
T 1x8b_A           69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGS-----LAD-----------------AISENYRIMSYFKEAELKDLLLQVGR  126 (289)
T ss_dssp             SCTTBCCEEEEEEETTEEEEEEECCTTCB-----HHH-----------------HHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             CCCCeeeeeeeeecCCeEEEEEEecCCCc-----HHH-----------------HHHhhcccccCCCHHHHHHHHHHHHH
Confidence            56666666665544555566666655421     111                 22211    23456667778888899


Q ss_pred             CceeeccCCcccccc-cccccc---------------------------------------------------cC-CCC-
Q psy1684          83 GLCVNLRKPCVQVSC-RIYLVH---------------------------------------------------GT-NLS-  108 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~l~~---------------------------------------------------~~-~~~-  108 (189)
                      |+.++|..+++|+|+ |+.+.-                                                   |. ... 
T Consensus       127 al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~  206 (289)
T 1x8b_A          127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENY  206 (289)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCC
T ss_pred             HHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCC
Confidence            999999999999996 552211                                                   00 122 


Q ss_pred             Cccc-e-EEEec------CCC---CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------SGG---MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------~~~---~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||||      ..+   ....+....+..+..+..|..+|+++.+|+.+||+.||++|||+.++++
T Consensus       207 ~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          207 THLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            5667 8 99999      111   1123445567778778888999999999999999999999999999875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.49  E-value=7.5e-16  Score=113.68  Aligned_cols=104  Identities=11%  Similarity=0.034  Sum_probs=79.0

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c--------------------ccccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y--------------------LVHGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~--------------------l~~~~-~~~~  109 (189)
                      .+...++..+..+.+.|+.++|..+++|+|+ |.               +                    +++|. ....
T Consensus       107 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  186 (276)
T 2h6d_A          107 RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL  186 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCC
Confidence            4455666777788888999999999999986 44               1                    12222 2223


Q ss_pred             c-cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         110 V-VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       110 ~-~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      + +. + |||+|            |.+.+..++...+..+. ...|..++.++.+++.+||+.||++|||+.++++.
T Consensus       187 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc-ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            3 57 8 99999            66666777777776664 45678899999999999999999999999999873

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.49  E-value=9.2e-16  Score=114.35  Aligned_cols=117  Identities=14%  Similarity=0.061  Sum_probs=85.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cccc--------------------cc----------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL--------------------VH----------------------  103 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l--------------------~~----------------------  103 (189)
                      .++..++..+..+.+.|+.++|..+++|+|+ |+.+                    +.                      
T Consensus       102 ~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt  181 (298)
T 1csn_A          102 KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT  181 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCC
Confidence            4667778888899999999999999999996 5511                    11                      


Q ss_pred             ------cC-CCCCccc-e-EEEec------------CCCC---ChHHHHHHHHcC-CCCC---CCCCCCHHHHHHHHHhc
Q psy1684         104 ------GT-NLSGVVV-S-AVDFG------------SGGM---TNAEVLHQVEHG-YRMP---CPPGCPPRLYDIMLECW  155 (189)
Q Consensus       104 ------~~-~~~~~~~-s-VwsfG------------~~~~---~~~~~~~~v~~g-~~~~---~p~~~p~~~~~l~~~C~  155 (189)
                            |. ....++. + |||||            |.+.   ...+....+..+ ...+   .+..+|+++.+|+.+||
T Consensus       182 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  261 (298)
T 1csn_A          182 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYAR  261 (298)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             cccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHh
Confidence                  00 2345788 9 99999            4443   344444444322 1122   23578999999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         156 LKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       156 ~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      +.||++|||+++|++.|+++++......
T Consensus       262 ~~dp~~RP~~~~l~~~l~~~~~~~~~~~  289 (298)
T 1csn_A          262 NLAFDATPDYDYLQGLFSKVLERLNTTE  289 (298)
T ss_dssp             HCCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred             cCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999998755433

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.49  E-value=1.1e-15  Score=115.46  Aligned_cols=110  Identities=15%  Similarity=0.036  Sum_probs=81.5

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cccc-------------------c------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL-------------------V------------------  102 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l-------------------~------------------  102 (189)
                      ++.....++...+..+..+.+.|+.++|..+++|+|+ |+.+                   +                  
T Consensus       105 ~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y  184 (321)
T 2a2a_A          105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEF  184 (321)
T ss_dssp             HHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGG
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCc
Confidence            4443444556677777888889999999999999986 5511                   1                  


Q ss_pred             --ccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHhcccCCCCC
Q psy1684         103 --HGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       103 --~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~---~p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                        +|. ....++. + |||||            |.+.+..+....+..+....   .+..+|.++.+|+.+||+.||++|
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  264 (321)
T 2a2a_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKR  264 (321)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTS
T ss_pred             cCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhC
Confidence              110 3356888 9 99999            66667777777776653222   125789999999999999999999


Q ss_pred             CCHHHHHH
Q psy1684         163 PTFETLQW  170 (189)
Q Consensus       163 P~~~~i~~  170 (189)
                      ||+.++++
T Consensus       265 ps~~e~l~  272 (321)
T 2a2a_A          265 LTIQEALR  272 (321)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHhc
Confidence            99999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.49  E-value=1e-15  Score=118.11  Aligned_cols=145  Identities=8%  Similarity=0.016  Sum_probs=104.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||+|++.+ +    ++..                 ++.. ...+...+...+..+++.
T Consensus       141 ~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~-~----~L~~-----------------~l~~~~~~l~~~~~~~i~~qi~~  198 (373)
T 2x4f_A          141 NQLDHANLIQLYDAFESKNDIVLVMEYVDG-G----ELFD-----------------RIIDESYNLTELDTILFMKQICE  198 (373)
T ss_dssp             TTCCCTTBCCEEEEEECSSEEEEEEECCTT-C----EEHH-----------------HHHHTGGGCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEEECCEEEEEEeCCCC-C----cHHH-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            467888998888877766778888888876 3    2222                 1111 123445566667788889


Q ss_pred             CceeeccCCcccccc-cccc-----------------cc--------------------cC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RIYL-----------------VH--------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~l-----------------~~--------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |+.+                 +.                    |. ....++. + |||||   
T Consensus       199 aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  278 (373)
T 2x4f_A          199 GIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA  278 (373)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHH
Confidence            999999999999996 5521                 11                    10 3355788 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCC-CC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYR-MP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~-~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..+.+..+..+.. ++  ....+++++.+|+.+||+.||.+|||+.++++
T Consensus       279 ~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          279 YMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                     677777777777755432 22  12578999999999999999999999999987

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.49  E-value=2.1e-16  Score=122.35  Aligned_cols=145  Identities=13%  Similarity=0.070  Sum_probs=92.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+......+||+|++..+.     +..                 ++..  ...+....+..+..+.+.
T Consensus        82 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~qi~~  139 (389)
T 3gni_B           82 LFNHPNIVPYRATFIADNELWVVTSFMAYGS-----AKD-----------------LICTHFMDGMNELAIAYILQGVLK  139 (389)
T ss_dssp             HCCCTTBCCEEEEEEETTEEEEEEECCTTCB-----HHH-----------------HHHHTCTTCCCHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcEeEEEEECCEEEEEEEccCCCC-----HHH-----------------HHhhhcccCCCHHHHHHHHHHHHH
Confidence            4567777777776665566777777776522     111                 2211  123456667777888899


Q ss_pred             CceeeccCCcccccc-cc---------------c----------------------------ccccC-CC--CCccc-e-
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y----------------------------LVHGT-NL--SGVVV-S-  113 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~----------------------------l~~~~-~~--~~~~~-s-  113 (189)
                      |+.++|..+++|+|+ |+               +                            +|+|. ..  ..|+. + 
T Consensus       140 ~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D  219 (389)
T 3gni_B          140 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSD  219 (389)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHH
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhH
Confidence            999999999999996 55               1                            12222 22  46889 9 


Q ss_pred             EEEec------------CCCCChHHHHHHHHcCC---------------------------------------------C
Q psy1684         114 AVDFG------------SGGMTNAEVLHQVEHGY---------------------------------------------R  136 (189)
Q Consensus       114 VwsfG------------~~~~~~~~~~~~v~~g~---------------------------------------------~  136 (189)
                      |||+|            |.+.+..+.+..+..+.                                             .
T Consensus       220 iwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (389)
T 3gni_B          220 IYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPS  299 (389)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCC
Confidence            99999            55544433332222111                                             1


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         137 MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       137 ~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+.+..+++++.+|+.+||+.||++|||+.|+++.
T Consensus       300 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          300 HPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            12345688999999999999999999999999854

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.49  E-value=5.4e-16  Score=115.77  Aligned_cols=110  Identities=18%  Similarity=0.170  Sum_probs=76.3

Q ss_pred             CCcCHhHHHHHhhhccCCceeec--------cCCcccccc-cc---------------ccc-------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNL--------RKPCVQVSC-RI---------------YLV-------------------  102 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~--------~~~~~~~~~-p~---------------~l~-------------------  102 (189)
                      ..+.......+..+.+.|+.++|        ..+++|+|+ |+               |++                   
T Consensus       100 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  179 (301)
T 3q4u_A          100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG  179 (301)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCC
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccc
Confidence            34556677778888999999999        889999996 55               222                   


Q ss_pred             ------ccC-CCC------Cccc-e-EEEec------CCC---------------------CChHHHHHHH-HcCCCCCC
Q psy1684         103 ------HGT-NLS------GVVV-S-AVDFG------SGG---------------------MTNAEVLHQV-EHGYRMPC  139 (189)
Q Consensus       103 ------~~~-~~~------~~~~-s-VwsfG------~~~---------------------~~~~~~~~~v-~~g~~~~~  139 (189)
                            +|. ...      .++. + |||||      ..+                     .....+...+ ..+.++..
T Consensus       180 t~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (301)
T 3q4u_A          180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNI  259 (301)
T ss_dssp             CGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             ccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCC
Confidence                  111 111      4568 8 99999      211                     1112333333 33444544


Q ss_pred             CC-----CCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q psy1684         140 PP-----GCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF  175 (189)
Q Consensus       140 p~-----~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~  175 (189)
                      |.     .+++++.+||.+||+.||++|||+++|++.|+.+
T Consensus       260 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          260 PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            43     3667899999999999999999999999999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.48  E-value=1.5e-15  Score=115.16  Aligned_cols=142  Identities=12%  Similarity=0.017  Sum_probs=97.0

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      +.|+|++++++.+......|||+|++.+ +    ++..                 ++.....+....+..+..+.+.|+.
T Consensus        78 l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~~~qi~~al~  135 (327)
T 3a62_A           78 VKHPFIVDLIYAFQTGGKLYLILEYLSG-G----ELFM-----------------QLEREGIFMEDTACFYLAEISMALG  135 (327)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCTT-E----EHHH-----------------HHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccceeEEEEcCCEEEEEEeCCCC-C----cHHH-----------------HHHhCCCCCHHHHHHHHHHHHHHHH
Confidence            4556666655555444455666665554 2    1111                 2322334445556667778888999


Q ss_pred             eeccCCcccccc-cc---------------ccccc---------------------C-CCCCccc-e-EEEec-------
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHG---------------------T-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~---------------------~-~~~~~~~-s-VwsfG-------  118 (189)
                      ++|..+++|+|+ |+               |++..                     . ....++. + |||+|       
T Consensus       136 ~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (327)
T 3a62_A          136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML  215 (327)
T ss_dssp             HHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH
Confidence            999999999996 55               22221                     1 3455788 9 99999       


Q ss_pred             -----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 -----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 -----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                           |.+.+..++...+.++ .+..|..+++++.+|+.+||..||++||     ++.++++
T Consensus       216 ~g~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          216 TGAPPFTGENRKKTIDKILKC-KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHT-CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HCCCCCCCCCHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                 7777777777777665 3556788999999999999999999999     6777765

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.48  E-value=3.5e-16  Score=117.74  Aligned_cols=113  Identities=15%  Similarity=0.089  Sum_probs=81.1

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c-----------------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y-----------------------------  100 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~-----------------------------  100 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |+               +                             
T Consensus       129 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  208 (317)
T 2buj_A          129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS  208 (317)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcc
Confidence            34556777778888999999999999999986 54               1                             


Q ss_pred             -ccccCCC----CCccc-e-EEEec------CCCCCh--------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCC
Q psy1684         101 -LVHGTNL----SGVVV-S-AVDFG------SGGMTN--------AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDP  159 (189)
Q Consensus       101 -l~~~~~~----~~~~~-s-VwsfG------~~~~~~--------~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p  159 (189)
                       +++|...    ..++. + |||||      +.+..+        ..+...+....+.+.+..+|.++.+|+.+||+.||
T Consensus       209 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  288 (317)
T 2buj_A          209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDP  288 (317)
T ss_dssp             GCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcCh
Confidence             1222211    12688 8 99999      112111        12333445555666677899999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHhh
Q psy1684         160 VKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       160 ~~RP~~~~i~~~l~~~~~~  178 (189)
                      ++|||+.++++.|+.+...
T Consensus       289 ~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          289 HQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             GGSCCHHHHHHHHHHTCCC
T ss_pred             hhCCCHHHHHHHhhhcCCC
Confidence            9999999999999887653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.48  E-value=5.2e-16  Score=115.66  Aligned_cols=144  Identities=14%  Similarity=0.095  Sum_probs=99.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+...+..++|+|++..+.     +..                 ++.....++..++..+..+.+.|+
T Consensus        71 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~~~~~~~~~i~~qi~~~l  128 (294)
T 2rku_A           71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRS-----LLE-----------------LHKRRKALTEPEARYYLRQIVLGC  128 (294)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEEECCTTCB-----HHH-----------------HHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeeeeeeccCCEEEEEEecCCCCC-----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            4566777776666555555666666665421     111                 222223455666777778888999


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               +++.                     |. ....++. + |||+|      
T Consensus       129 ~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  208 (294)
T 2rku_A          129 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL  208 (294)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHH
Confidence            9999999999986 44               1111                     11 2345788 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            |.+.+..+....+..+ ..+.|..+++++.+|+.+||+.||++|||+.++++.
T Consensus       209 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          209 LVGKPPFETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTT-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HhCCCCCCCCCHHHHHHHHhhc-cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                  6666666666666554 355678899999999999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.48  E-value=5.9e-16  Score=118.41  Aligned_cols=147  Identities=11%  Similarity=0.009  Sum_probs=96.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......|||+|++.+ +++.-.+..            .     ......+.......+..+++.|+
T Consensus        82 ~l~hpnIv~~~~~~~~~~~~~lv~e~~~g-~~L~~~l~~------------~-----~~~~~~~~~~~~~~i~~qi~~al  143 (351)
T 3c0i_A           82 MLKHPHIVELLETYSSDGMLYMVFEFMDG-ADLCFEIVK------------R-----ADAGFVYSEAVASHYMRQILEAL  143 (351)
T ss_dssp             HCCCTTBCCEEEEEEETTEEEEEEECCSS-CBHHHHHHH------------H-----HHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcEEEEEEeCCEEEEEEeCCCC-CCHHHHHHH------------h-----cccCCCCCHHHHHHHHHHHHHHH
Confidence            35677777777666555566777777765 211000000            0     00112344556667778888999


Q ss_pred             eeeccCCcccccc-cccc------------------cc---------------------cC-CCCCccc-e-EEEec---
Q psy1684          85 CVNLRKPCVQVSC-RIYL------------------VH---------------------GT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~~l------------------~~---------------------~~-~~~~~~~-s-VwsfG---  118 (189)
                      .++|..+++|+|+ |+.+                  +.                     |. ....|+. + |||+|   
T Consensus       144 ~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  223 (351)
T 3c0i_A          144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL  223 (351)
T ss_dssp             HHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             HHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHH
Confidence            9999999999996 5511                  11                     11 3456888 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+ ...++...+..+.....|   ..+++++.+|+.+||+.||++|||+.++++
T Consensus       224 ~~ll~g~~pf~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          224 FILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHSSCSSCS-SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCCCCC-cHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                     444 345666666665433222   578999999999999999999999999986

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.48  E-value=6.9e-17  Score=122.98  Aligned_cols=144  Identities=10%  Similarity=0.022  Sum_probs=97.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+......+||+|++.  |    ++..                 ++.....++..+...+..+.+.|
T Consensus        64 ~~l~hpnIv~l~~~~~~~~~~~lv~E~~~--g----~l~~-----------------~l~~~~~l~~~~~~~i~~qi~~a  120 (336)
T 3h4j_B           64 KLLRHPHIIKLYDVITTPTDIVMVIEYAG--G----ELFD-----------------YIVEKKRMTEDEGRRFFQQIICA  120 (336)
T ss_dssp             TTCCCTTBCCEEEEEECSSEEEEEECCCC--E----EHHH-----------------HHHHHCSCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEEeCCEEEEEEECCC--C----cHHH-----------------HHHHcCCCCHHHHHHHHHHHHHH
Confidence            45667777777776665666677777762  2    1111                 33333445566777788888999


Q ss_pred             ceeeccCCcccccc-cc---------------cc--------------------cccC-CCCCc-cc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL--------------------VHGT-NLSGV-VV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l--------------------~~~~-~~~~~-~~-s-VwsfG-----  118 (189)
                      +.++|..+++|+|+ |+               |+                    |+|. ....+ +. + |||+|     
T Consensus       121 L~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~  200 (336)
T 3h4j_B          121 IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYV  200 (336)
T ss_dssp             HHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHH
Confidence            99999999999996 55               22                    2222 22334 57 8 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             |.+....++...+..+ ....|..+++++.+|+.+||+.||.+|||++||++.
T Consensus       201 ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          201 MLVGRLPFDDEFIPNLFKKVNSC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHHSSCSSBCSSSTTCBCCCCSS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHhCCCCCCCccHHHHHHHHHcC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                   4443333333333333 345678899999999999999999999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.47  E-value=2.2e-15  Score=113.98  Aligned_cols=144  Identities=8%  Similarity=-0.015  Sum_probs=95.9

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      ++|+|++++++.+......|||+|++.+ +    ++..                 ++.....++..++..+..+.+.|+.
T Consensus        62 l~hpnIv~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~i~~qi~~aL~  119 (323)
T 3tki_A           62 LNHENVVKFYGHRREGNIQYLFLEYCSG-G----ELFD-----------------RIEPDIGMPEPDAQRFFHQLMAGVV  119 (323)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTT-E----EGGG-----------------GSBTTTBCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEecCCeEEEEEEcCCC-C----cHHH-----------------HHhhcCCCCHHHHHHHHHHHHHHHH
Confidence            5566777766665555556666666654 2    1111                 4444445667777888889999999


Q ss_pred             eeccCCcccccc-cc---------------cccc-----------------------cC-CCCC-ccc-e-EEEec----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSG-VVV-S-AVDFG----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~-~~~-s-VwsfG----  118 (189)
                      ++|..+++|+|+ |+               |++.                       |. .... ++. + |||+|    
T Consensus       120 ~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  199 (323)
T 3tki_A          120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT  199 (323)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred             HHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH
Confidence            999999999996 55               2221                       11 1233 377 8 99999    


Q ss_pred             --------CCCCCh--HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMTN--AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~~--~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+.+.  .............+....++.++.+|+.+||+.||++|||+.|+++.
T Consensus       200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                    444333  22222223333344446789999999999999999999999999763

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=8.4e-16  Score=116.46  Aligned_cols=114  Identities=17%  Similarity=0.278  Sum_probs=78.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccC--------Ccccccc-cc---------------cccc-------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRK--------PCVQVSC-RI---------------YLVH-------------------  103 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~--------~~~~~~~-p~---------------~l~~-------------------  103 (189)
                      .+....+..+..+.+.|+.++|..        +++|+|+ |+               |++.                   
T Consensus       130 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  209 (337)
T 3mdy_A          130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT  209 (337)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccC
Confidence            345666777778888999999988        8999996 54               2221                   


Q ss_pred             ------cC-C----CC--Cccc-e-EEEec------CCC----------------C-----ChHHHHHHH-HcCCCCCCC
Q psy1684         104 ------GT-N----LS--GVVV-S-AVDFG------SGG----------------M-----TNAEVLHQV-EHGYRMPCP  140 (189)
Q Consensus       104 ------~~-~----~~--~~~~-s-VwsfG------~~~----------------~-----~~~~~~~~v-~~g~~~~~p  140 (189)
                            |. .    ..  .++. + |||||      ..+                .     ...++...+ ..+.++..|
T Consensus       210 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (337)
T 3mdy_A          210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP  289 (337)
T ss_dssp             GGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             cceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccc
Confidence                  11 0    11  1235 8 99999      111                1     122333333 334455555


Q ss_pred             C-----CCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         141 P-----GCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       141 ~-----~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                      .     .|++++.+||.+||+.||++|||+.+|++.|+.+.++.+
T Consensus       290 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          290 NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            3     677889999999999999999999999999999988643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.47  E-value=6.5e-16  Score=118.01  Aligned_cols=103  Identities=14%  Similarity=0.067  Sum_probs=82.2

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC----------------------CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT----------------------NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~----------------------~~  107 (189)
                      ..++......+..+.+.|+.++|..+++|||+ |+               |+++..                      ..
T Consensus       113 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  192 (345)
T 1xjd_A          113 HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG  192 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcC
Confidence            44556667777888889999999999999996 55               333321                      34


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-HHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE-TLQ  169 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~-~i~  169 (189)
                      ..|+. + |||+|            |.+.+..++...+..+. +..|..+++++.+|+.+||..||++||++. +|+
T Consensus       193 ~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC-CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            56889 9 99999            77777788888887663 556788999999999999999999999997 665

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.47  E-value=3.7e-16  Score=117.60  Aligned_cols=104  Identities=15%  Similarity=0.134  Sum_probs=76.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------------------------cccccCCCCCc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------------------------YLVHGTNLSGV  110 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------------------------~l~~~~~~~~~  110 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+                                   ++|+|...+.+
T Consensus       153 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  232 (311)
T 3p1a_A          153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSY  232 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcCCC
Confidence            3556777778888999999999999999996 44                                   23344344578


Q ss_pred             cc-e-EEEec------C---CCCChHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------S---GGMTNAEVLHQVEHGYRM-PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       111 ~~-s-VwsfG------~---~~~~~~~~~~~v~~g~~~-~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +. + |||||      .   .-....+....+..+..+ ..+..+++++.+|+.+||+.||++|||++++++
T Consensus       233 ~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             STHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            89 9 99999      1   111223344455555332 345789999999999999999999999999885

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.47  E-value=1.1e-15  Score=118.52  Aligned_cols=111  Identities=14%  Similarity=0.105  Sum_probs=79.8

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------ccccc---------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------YLVHG---------------------  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------~l~~~---------------------  104 (189)
                      ++.....+...+...+..+++.|+.++|..+++|||+ |+              |++..                     
T Consensus       145 ~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a  224 (390)
T 2zmd_A          145 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP  224 (390)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCCCGGGCC
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCcCCCccC
Confidence            4444445555667777888899999999999999996 55              22221                     


Q ss_pred             --CC------------CCCccc-e-EEEec------------CCCCC-hHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHh
Q psy1684         105 --TN------------LSGVVV-S-AVDFG------------SGGMT-NAEVLHQVE-HGYRMPCPPGCPPRLYDIMLEC  154 (189)
Q Consensus       105 --~~------------~~~~~~-s-VwsfG------------~~~~~-~~~~~~~v~-~g~~~~~p~~~p~~~~~l~~~C  154 (189)
                        ..            ...|+. + |||||            |.+.. ....+..+. .....+.|..++.++.+|+.+|
T Consensus       225 PE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  304 (390)
T 2zmd_A          225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCC  304 (390)
T ss_dssp             HHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHH
T ss_pred             hHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHH
Confidence              11            135888 9 99999            44433 233444443 3456677888899999999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q psy1684         155 WLKDPVKRPTFETLQWK  171 (189)
Q Consensus       155 ~~~~p~~RP~~~~i~~~  171 (189)
                      |+.||++|||+.++++.
T Consensus       305 L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          305 LKRDPKQRISIPELLAH  321 (390)
T ss_dssp             TCSSTTTSCCHHHHHTS
T ss_pred             cccChhhCCCHHHHhhC
Confidence            99999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.47  E-value=7.4e-16  Score=117.07  Aligned_cols=144  Identities=14%  Similarity=0.087  Sum_probs=100.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+...+..|||+|++..+.     +..                 ++.....+...++..+..+.+.|+
T Consensus        97 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~~~~~~~l~~~~~~~i~~qi~~aL  154 (335)
T 2owb_A           97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRS-----LLE-----------------LHKRRKALTEPEARYYLRQIVLGC  154 (335)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEECCCTTCB-----HHH-----------------HHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEecCCeEEEEEecCCCCC-----HHH-----------------HHhccCCCCHHHHHHHHHHHHHHH
Confidence            4567777777666555555667777665421     111                 222223455666777788888999


Q ss_pred             eeeccCCcccccc-cc---------------ccccc---------------------C-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVHG---------------------T-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~~---------------------~-~~~~~~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               +++..                     . ....++. + |||||      
T Consensus       155 ~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l  234 (335)
T 2owb_A          155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL  234 (335)
T ss_dssp             HHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            9999999999996 54               22111                     0 2344788 8 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            |.+....+....+..+. ...|..+++++.+|+.+||+.||++|||+.++++.
T Consensus       235 ~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          235 LVGKPPFETSCLKETYLRIKKNE-YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHCcCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  66666666666665543 45678899999999999999999999999999873

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.47  E-value=1.2e-15  Score=113.56  Aligned_cols=110  Identities=12%  Similarity=0.092  Sum_probs=80.0

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCC--cccccc-cc-----------------------------------ccc
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKP--CVQVSC-RI-----------------------------------YLV  102 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~--~~~~~~-p~-----------------------------------~l~  102 (189)
                      ++.....+....+..+..+.+.|+.++|...  ++|+|+ |+                                   +++
T Consensus       119 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~a  198 (290)
T 1t4h_A          119 YLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMA  198 (290)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCC
T ss_pred             HHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCC
Confidence            3433334556667777888889999999988  999986 54                                   122


Q ss_pred             ccCCCCCccc-e-EEEec------------CCCC-ChHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         103 HGTNLSGVVV-S-AVDFG------------SGGM-TNAEVLHQVEHGYRM-PCPPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       103 ~~~~~~~~~~-s-VwsfG------------~~~~-~~~~~~~~v~~g~~~-~~p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                      +|...+.++. + |||+|            |.+. +..++...+..+..+ ..+..+++++.+|+.+||+.||++|||+.
T Consensus       199 PE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  278 (290)
T 1t4h_A          199 PEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIK  278 (290)
T ss_dssp             GGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            2223456888 9 99999            5443 345566666666444 34567889999999999999999999999


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      ++++
T Consensus       279 ell~  282 (290)
T 1t4h_A          279 DLLN  282 (290)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9886

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.47  E-value=1.4e-15  Score=117.30  Aligned_cols=101  Identities=13%  Similarity=-0.048  Sum_probs=78.4

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC----------------------CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT----------------------NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~----------------------~~  107 (189)
                      ..+.......+..+++.|+.++|..+++|||+ |+               |+++..                      ..
T Consensus       134 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  213 (373)
T 2r5t_A          134 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK  213 (373)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCC
Confidence            34555555667778889999999999999996 55               333321                      34


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFET  167 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~  167 (189)
                      ..|+. + |||+|            |.+.+..++...+..+ .+..|..++.++.+|+.+||+.||++||++.+
T Consensus       214 ~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS-CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            56889 9 99999            6677777888887665 34567789999999999999999999999854

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.47  E-value=6.4e-16  Score=117.15  Aligned_cols=110  Identities=11%  Similarity=0.036  Sum_probs=77.0

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cccccc------------------------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVH------------------------------------  103 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~------------------------------------  103 (189)
                      ++.....+....+..+..+.+.|+.++|..+++|+|+ |+.+.-                                    
T Consensus       122 ~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  201 (329)
T 3gbz_A          122 YMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITL  201 (329)
T ss_dssp             HHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CC
T ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCc
Confidence            4443445566777778888899999999999999996 552111                                    


Q ss_pred             -----cC-CC-CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCC----------------------
Q psy1684         104 -----GT-NL-SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCP----------------------  140 (189)
Q Consensus       104 -----~~-~~-~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p----------------------  140 (189)
                           |. .. ..++. + |||+|            |.+.+..+.+..+......+.+                      
T Consensus       202 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (329)
T 3gbz_A          202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGK  281 (329)
T ss_dssp             TTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC
T ss_pred             cccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccc
Confidence                 11 22 34788 9 99999            6666666655555322111111                      


Q ss_pred             -------CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         141 -------PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       141 -------~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             ..+++++.+|+.+||+.||++|||++|+++
T Consensus       282 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          282 TLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                   116789999999999999999999999876

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.47  E-value=1.2e-15  Score=114.24  Aligned_cols=104  Identities=15%  Similarity=0.116  Sum_probs=80.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc-----------------------ccC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~  106 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               +++                       +|. .
T Consensus       105 ~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (305)
T 2wtk_C          105 RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN  184 (305)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHT
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhcc
Confidence            4556677778888899999999999999996 54               111                       111 1


Q ss_pred             C--CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         107 L--SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       107 ~--~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .  ..++. + |||+|            |.+.+..++...+..+. .+.|..+++++.+|+.+||+.||++|||+.++++
T Consensus       185 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS-YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             CCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC-CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC-CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1  22467 8 99999            66767777777776663 4567899999999999999999999999999986


Q ss_pred             H
Q psy1684         171 K  171 (189)
Q Consensus       171 ~  171 (189)
                      .
T Consensus       264 ~  264 (305)
T 2wtk_C          264 H  264 (305)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.47  E-value=7.5e-17  Score=121.90  Aligned_cols=150  Identities=12%  Similarity=0.077  Sum_probs=97.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC----CCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA----GRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~----~~~~~~l~~li~~~~~   79 (189)
                      ..+.|+|++++++.+......+||+|++.++.     +..                 ++.    ....+.......+..+
T Consensus        82 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~~~~~i~~~  139 (326)
T 3uim_A           82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGS-----VAS-----------------CLRERPESQPPLDWPKRQRIALG  139 (326)
T ss_dssp             GTCCCTTBCCCCEEECCSSCCEEEEECCTTCB-----HHH-----------------HHHCCSTTCCCCCHHHHHHHHHH
T ss_pred             HhccCCCccceEEEEecCCceEEEEEeccCCC-----HHH-----------------HHHhccccCCCCCHHHHHHHHHH
Confidence            45778999998888877777889998887632     111                 111    1223446667777888


Q ss_pred             ccCCceeeccC---Ccccccc-cc---------------cccc----------------------cC-CCCCccc-e-EE
Q psy1684          80 DADGLCVNLRK---PCVQVSC-RI---------------YLVH----------------------GT-NLSGVVV-S-AV  115 (189)
Q Consensus        80 ~a~gl~~~~~~---~~~~~~~-p~---------------~l~~----------------------~~-~~~~~~~-s-Vw  115 (189)
                      .+.|+.++|..   +++|+|+ |+               |++.                      |. ....++. + ||
T Consensus       140 i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  219 (326)
T 3uim_A          140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF  219 (326)
T ss_dssp             HHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred             HHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccch
Confidence            88999999999   9999996 54               2221                      11 2345788 8 99


Q ss_pred             Eec------CCCCCh-----------HHHHHHHH---cCC----------CCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         116 DFG------SGGMTN-----------AEVLHQVE---HGY----------RMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       116 sfG------~~~~~~-----------~~~~~~v~---~g~----------~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      |||      ..+..+           ..+...+.   ...          ....+..++.++.+++.+||+.||++|||+
T Consensus       220 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  299 (326)
T 3uim_A          220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM  299 (326)
T ss_dssp             HHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred             hHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence            999      111111           00111111   111          111222344789999999999999999999


Q ss_pred             HHHHHHHHHH
Q psy1684         166 ETLQWKLEDF  175 (189)
Q Consensus       166 ~~i~~~l~~~  175 (189)
                      ++|++.|+..
T Consensus       300 ~ell~~L~~~  309 (326)
T 3uim_A          300 SEVVRMLEGD  309 (326)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHhcCc
Confidence            9999999753

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.20  E-value=4.4e-15  Score=111.30  Aligned_cols=89  Identities=31%  Similarity=0.448  Sum_probs=76.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|...  .+|+||||++.+..|.|+||++.  .+.++||+|.+..+| |..+...|. +.+||+||.
T Consensus        14 Wyhg~isR~~Ae~lL~~~--~~G~FLvR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~F~sl~~Lv~~y~   89 (303)
T 2lqn_A           14 WYMGPVSRQEAQTRLQGQ--RHGMFLVRDSSTCPGDYVLSVSE--NSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYK   89 (303)
Confidence            999999999999999643  78999999998888999999999  899999999987777 666667888 999999999


Q ss_pred             hccCCceeeccCCccc
Q psy1684          79 KDADGLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~   94 (189)
                      .... ....+..||.+
T Consensus        90 ~~~~-~~~~L~~P~~r  104 (303)
T 2lqn_A           90 IHYL-DTTTLIEPAPR  104 (303)
Confidence            8776 35566666654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.46  E-value=6.4e-15  Score=112.20  Aligned_cols=150  Identities=10%  Similarity=-0.042  Sum_probs=103.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+...+..+||+|++.. +++.-.+..        ..       .+..  ...++...+..+..+.+
T Consensus        98 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~~~~--------~~-------~l~~~~~~~~~~~~~~~i~~qi~  161 (348)
T 2pml_X           98 TDIKNEYCLTCEGIITNYDEVYIIYEYMEN-DSILKFDEY--------FF-------VLDKNYTCFIPIQVIKCIIKSVL  161 (348)
T ss_dssp             TTCCCTTBCCCSEEEESSSEEEEEEECCTT-CBSSEESSS--------EE-------SSCSSSCCCCCHHHHHHHHHHHH
T ss_pred             HhCCCCCcceEEEEEeeCCeEEEEEeccCC-CcHHHHHHH--------hh-------hhhhccccCCCHHHHHHHHHHHH
Confidence            457788888888877777778899998876 321110000        00       0222  23445677777888889


Q ss_pred             CCceeecc-CCcccccc-cc----------------------------------cccccC-CCC-Cccc--e-EEEec--
Q psy1684          82 DGLCVNLR-KPCVQVSC-RI----------------------------------YLVHGT-NLS-GVVV--S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~-~~~~~~~~-p~----------------------------------~l~~~~-~~~-~~~~--s-VwsfG--  118 (189)
                      .|+.++|. .+++|+|+ |+                                  ++++|. ... .++.  + |||||  
T Consensus       162 ~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  241 (348)
T 2pml_X          162 NSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC  241 (348)
T ss_dssp             HHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHH
Confidence            99999998 99999996 54                                  122222 222 4554  7 99999  


Q ss_pred             ----------CCCCCh-HHHHHHHHcCCCCCCC-------------------CCCCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         119 ----------SGGMTN-AEVLHQVEHGYRMPCP-------------------PGCPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       119 ----------~~~~~~-~~~~~~v~~g~~~~~p-------------------~~~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                                |.+.+. .++...+..+. ++.|                   ..+|.++.+|+.+||+.||++|||+.++
T Consensus       242 l~~l~~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~  320 (348)
T 2pml_X          242 LYVMFYNVVPFSLKISLVELFNNIRTKN-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA  320 (348)
T ss_dssp             HHHHHHSSCSSCCSSCSHHHHHHHTSCC-CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHhccC-cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence                      555544 67777776553 3334                   6789999999999999999999999999


Q ss_pred             HH
Q psy1684         169 QW  170 (189)
Q Consensus       169 ~~  170 (189)
                      ++
T Consensus       321 l~  322 (348)
T 2pml_X          321 LK  322 (348)
T ss_dssp             HT
T ss_pred             hc
Confidence            86

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.46  E-value=1.9e-15  Score=113.58  Aligned_cols=118  Identities=14%  Similarity=0.080  Sum_probs=83.1

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------  103 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------  103 (189)
                      ++.....+...++..+..+.+.|+.++|..+++|+|+ |+               +++.                     
T Consensus       106 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  185 (311)
T 3ork_A          106 IVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY  185 (311)
T ss_dssp             HHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTT
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCccc
Confidence            3333344556777778888899999999999999996 55               2221                     


Q ss_pred             ---cC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHhcccCCCCC
Q psy1684         104 ---GT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       104 ---~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~---~p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                         |. ....++. + |||||            |.+.+..++......+...+   .+..+|.++.+|+.+||+.||.+|
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  265 (311)
T 3ork_A          186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR  265 (311)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhC
Confidence               11 2346788 9 99999            67777767666654443332   235799999999999999999999


Q ss_pred             CCHHHHH-HHHHHHHhh
Q psy1684         163 PTFETLQ-WKLEDFFTM  178 (189)
Q Consensus       163 P~~~~i~-~~l~~~~~~  178 (189)
                      |+..+++ ..|..+...
T Consensus       266 ~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          266 YQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             CSSHHHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHhcC
Confidence            9766554 456665543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.46  E-value=6e-16  Score=114.40  Aligned_cols=144  Identities=12%  Similarity=0.036  Sum_probs=88.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+......+||+|++.. +    ++..                 ++... ..++..++..+..+.+.
T Consensus        66 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~----~L~~-----------------~l~~~~~~~~~~~~~~~~~qi~~  123 (278)
T 3cok_A           66 CQLKHPSILELYNYFEDSNYVYLVLEMCHN-G----EMNR-----------------YLKNRVKPFSENEARHFMHQIIT  123 (278)
T ss_dssp             TTBCCTTBCCEEEEEECSSEEEEEEECCTT-E----EHHH-----------------HHHTCSSCCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCeEeEEEEEccCCeEEEEEecCCC-C----cHHH-----------------HHhhccCCCCHHHHHHHHHHHHH
Confidence            345666666666655555555666666554 2    1111                 33322 34556777778888899


Q ss_pred             CceeeccCCcccccc-cc---------------cc---------------------cccC-CCCCccc-e-EEEec----
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL---------------------VHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      |+.++|..+++|+|+ |+               ++                     ++|. ....++. + |||||    
T Consensus       124 ~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  203 (278)
T 3cok_A          124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFY  203 (278)
T ss_dssp             HHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHH
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHH
Confidence            999999999999996 54               11                     1111 2345778 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+.+..+....+... ....|..++.++.+|+.+||+.||++|||++++++
T Consensus       204 ~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          204 TLLIGRPPFDTDTVKNTLNKVVLA-DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHSSCSSCCCSCC-----CCSS-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHhCCCCCCChhHHHHHHHHhhc-ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                    4444433444333222 23467789999999999999999999999999886

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.46  E-value=2.3e-15  Score=111.97  Aligned_cols=144  Identities=11%  Similarity=0.009  Sum_probs=93.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.....+..+||+|++.. +     +..                 ++.. ...+.......+..+.+.
T Consensus        55 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~~~~~~~~~~~~~~~~~~~qi~~  111 (288)
T 1ob3_A           55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D-----LKK-----------------LLDVCEGGLESVTAKSFLLQLLN  111 (288)
T ss_dssp             GGCCCTTBCCEEEEEECSSCEEEEEECCSE-E-----HHH-----------------HHHTSTTCCCHHHHHHHHHHHHH
T ss_pred             HhcCCCCEeeeeeEEccCCeEEEEEEecCC-C-----HHH-----------------HHHhcccCCCHHHHHHHHHHHHH
Confidence            345677777776665555556666666542 1     111                 2221 223445566677788899


Q ss_pred             CceeeccCCcccccc-cc---------------c---------------------ccccC-C-CCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------Y---------------------LVHGT-N-LSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~---------------------l~~~~-~-~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|+|+ |+               |                     +|+|. . ...++. + |||+|   
T Consensus       112 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  191 (288)
T 1ob3_A          112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF  191 (288)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHH
Confidence            999999999999996 55               1                     11221 1 235888 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHc--CCCC--------------------------CCCCCCCHHHHHHHHHhcccCCCC
Q psy1684         119 ---------SGGMTNAEVLHQVEH--GYRM--------------------------PCPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~--g~~~--------------------------~~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                               |.+.+..+.+..+.+  +...                          ..+..+++++.+|+.+||+.||++
T Consensus       192 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  271 (288)
T 1ob3_A          192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ  271 (288)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTT
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCccc
Confidence                     666666555544422  1100                          012357899999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      |||++++++
T Consensus       272 Rpt~~e~l~  280 (288)
T 1ob3_A          272 RITAKQALE  280 (288)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHhc
Confidence            999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.45  E-value=1.4e-15  Score=112.70  Aligned_cols=116  Identities=15%  Similarity=0.055  Sum_probs=83.5

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cccc-------------------c------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL-------------------V------------------  102 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l-------------------~------------------  102 (189)
                      ++.....++..++..+..+.+.|+.++|..+++|+|+ |+.+                   +                  
T Consensus        98 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y  177 (283)
T 3bhy_A           98 FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF  177 (283)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGG
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCc
Confidence            3333344556677777888889999999999999986 5411                   1                  


Q ss_pred             --ccC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHhcccCCCCC
Q psy1684         103 --HGT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       103 --~~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~---~p~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                        +|. ....++. + |||||            |.+.+..+....+..+....   .+..+|.++.+|+.+||+.||++|
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  257 (283)
T 3bhy_A          178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR  257 (283)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             cCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHC
Confidence              110 3456888 9 99999            66666777777665543221   235789999999999999999999


Q ss_pred             CCHHHHHH--HHHHHH
Q psy1684         163 PTFETLQW--KLEDFF  176 (189)
Q Consensus       163 P~~~~i~~--~l~~~~  176 (189)
                      ||+.++++  .++.+.
T Consensus       258 ps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          258 MTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CCHHHHHHCHHHHHHH
T ss_pred             cCHHHHHhCHHHHHHH
Confidence            99999987  355543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.45  E-value=5.6e-16  Score=115.09  Aligned_cols=147  Identities=16%  Similarity=0.054  Sum_probs=93.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++.+......+||+|++.. +     +..    ...     .    .......++...+..+..+.+.|+
T Consensus        62 ~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~-----l~~----~l~-----~----~~~~~~~~~~~~~~~i~~qi~~~l  122 (290)
T 3fme_A           62 TVDCPFTVTFYGALFREGDVWICMELMDT-S-----LDK----FYK-----Q----VIDKGQTIPEDILGKIAVSIVKAL  122 (290)
T ss_dssp             TCCCTTBCCEEEEEECSSSEEEEEECCSE-E-----HHH----HHH-----H----HHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCeEEEEeeeeeccCCEEEEEehhcc-c-----hHH----HHH-----H----HHhcCCCCCHHHHHHHHHHHHHHH
Confidence            45666666666655555556666666542 1     111    000     0    111233455667777888889999


Q ss_pred             eeeccC-Ccccccc-cc---------------cc--------------------cccC-----CCCCccc-e-EEEec--
Q psy1684          85 CVNLRK-PCVQVSC-RI---------------YL--------------------VHGT-----NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        85 ~~~~~~-~~~~~~~-p~---------------~l--------------------~~~~-----~~~~~~~-s-VwsfG--  118 (189)
                      .++|.. +++|+|+ |+               ++                    ++|.     ....++. + |||+|  
T Consensus       123 ~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  202 (290)
T 3fme_A          123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT  202 (290)
T ss_dssp             HHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHH
T ss_pred             HHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHH
Confidence            999998 9999996 54               11                    2221     2345788 9 99999  


Q ss_pred             ----------CCCC-ChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ----------SGGM-TNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ----------~~~~-~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                |.+. ...+.+..+ ........+..+|+++.+|+.+||+.||++|||+.++++
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          203 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence                      4432 233333344 444333344679999999999999999999999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.45  E-value=9.3e-16  Score=116.50  Aligned_cols=151  Identities=17%  Similarity=0.186  Sum_probs=96.7

Q ss_pred             CChHHHHHHhcCCCCCC----CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhcc
Q psy1684           6 IKRIEAEKKLLLPENDH----GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~----g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a   81 (189)
                      +.|+|++++++.+....    ..+||+|++..+.     +..                 ++. ...+...++..+..+.+
T Consensus        93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~l~-~~~~~~~~~~~i~~~i~  149 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS-----LFD-----------------YLN-RYTVTVEGMIKLALSTA  149 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCB-----HHH-----------------HHH-HCCBCHHHHHHHHHHHH
T ss_pred             cCCCcEEEEEeeecccCCccceeEEEEeecCCCc-----HHH-----------------HHh-ccCccHHHHHHHHHHHH
Confidence            56666666665543333    3466666665421     111                 232 12345667777788888


Q ss_pred             CCceeec--------cCCcccccc-cc---------------ccc-------------------------ccC-CCC---
Q psy1684          82 DGLCVNL--------RKPCVQVSC-RI---------------YLV-------------------------HGT-NLS---  108 (189)
Q Consensus        82 ~gl~~~~--------~~~~~~~~~-p~---------------~l~-------------------------~~~-~~~---  108 (189)
                      .|+.++|        ..+++|+|+ |+               +++                         +|. ...   
T Consensus       150 ~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  229 (342)
T 1b6c_B          150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM  229 (342)
T ss_dssp             HHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCT
T ss_pred             HHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccc
Confidence            9999999        788999996 55               111                         111 111   


Q ss_pred             ---Cccc-e-EEEec------CCC----------------C-----ChHHHHHHH-HcCCCCCCCC-----CCCHHHHHH
Q psy1684         109 ---GVVV-S-AVDFG------SGG----------------M-----TNAEVLHQV-EHGYRMPCPP-----GCPPRLYDI  150 (189)
Q Consensus       109 ---~~~~-s-VwsfG------~~~----------------~-----~~~~~~~~v-~~g~~~~~p~-----~~p~~~~~l  150 (189)
                         .++. + |||||      ..+                .     ...++...+ ..+.++..|.     .++..+.+|
T Consensus       230 ~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  309 (342)
T 1b6c_B          230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI  309 (342)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHH
T ss_pred             cccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHH
Confidence               3447 8 99999      221                1     123444444 3445555553     455789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         151 MLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      |.+||+.||++|||+.+|++.|+.+.+..
T Consensus       310 i~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          310 MRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999998753

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.45  E-value=2.2e-15  Score=116.64  Aligned_cols=143  Identities=9%  Similarity=0.038  Sum_probs=97.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......|+|+|++.+ |    ++..                 ++.....+....+..+..+.+.|+
T Consensus        71 ~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g-g----~L~~-----------------~l~~~~~l~~~~~~~~~~qi~~aL  128 (384)
T 4fr4_A           71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLG-G----DLRY-----------------HLQQNVHFKEETVKLFICELVMAL  128 (384)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEECCCTT-E----EHHH-----------------HHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcEEEEEEeCCEEEEEEecCCC-C----cHHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45667777766655555566666666654 2    1111                 344344566666777778889999


Q ss_pred             eeeccCCcccccc-cc-----------------------------------cccccCC----CCCccc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI-----------------------------------YLVHGTN----LSGVVV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~-----------------------------------~l~~~~~----~~~~~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+                                   ++|+|..    ...|+. + |||+|    
T Consensus       129 ~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~  208 (384)
T 4fr4_A          129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY  208 (384)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHH
T ss_pred             HHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHH
Confidence            9999999999996 55                                   2223322    345888 9 99999    


Q ss_pred             --------CCC---CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHHH
Q psy1684         119 --------SGG---MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-FETLQW  170 (189)
Q Consensus       119 --------~~~---~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-~~~i~~  170 (189)
                              |.+   ....++...+... ..+.|..+++++.+|+.+||+.||++||+ +.+|.+
T Consensus       209 elltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          209 ELLRGRRPYHIRSSTSSKEIVHTFETT-VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHSSCSSCCCTTSCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHhCCCCCCCCCCccHHHHHHHHhhc-ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence                    432   2334555544443 45678899999999999999999999998 666654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.45  E-value=8.3e-16  Score=113.76  Aligned_cols=112  Identities=11%  Similarity=0.050  Sum_probs=79.2

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc--------------------cC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~  109 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               +++.                    |. ....
T Consensus       118 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  197 (284)
T 2a19_B          118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD  197 (284)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCC
Confidence            3445666777888899999999999999996 55               1111                    11 2345


Q ss_pred             ccc-e-EEEec------CCCCC----hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         110 VVV-S-AVDFG------SGGMT----NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       110 ~~~-s-VwsfG------~~~~~----~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                      ++. + |||||      +.+..    ..+....+..+   ..+..+|.++.+|+.+||+.||.+|||+.++++.|..+..
T Consensus       198 ~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          198 YGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG---IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             CCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTT---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             CcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcc---cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            788 9 99999      22222    22333334433   3457789999999999999999999999999999998877


Q ss_pred             hcCC
Q psy1684         178 MEGS  181 (189)
Q Consensus       178 ~~~~  181 (189)
                      ..+.
T Consensus       275 ~~~~  278 (284)
T 2a19_B          275 SPEK  278 (284)
T ss_dssp             ----
T ss_pred             CCCc
Confidence            6543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.45  E-value=3e-15  Score=114.92  Aligned_cols=145  Identities=8%  Similarity=0.046  Sum_probs=95.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|++.+ +.    +..                 ++.....++...+..+..+.+.|+
T Consensus        72 ~l~hpniv~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~i~~ql~~~L  129 (361)
T 3uc3_A           72 SLRHPNIVRFKEVILTPTHLAIIMEYASG-GE----LYE-----------------RICNAGRFSEDEARFFFQQLLSGV  129 (361)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEEECCCS-CB----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcEEEEEeeCCEEEEEEEeCCC-CC----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45677777777666555566777777665 21    111                 222233455667777888889999


Q ss_pred             eeeccCCcccccc-cc-----------------cccc--------------------cC-CCCCc-cc-e-EEEec----
Q psy1684          85 CVNLRKPCVQVSC-RI-----------------YLVH--------------------GT-NLSGV-VV-S-AVDFG----  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~-----------------~l~~--------------------~~-~~~~~-~~-s-VwsfG----  118 (189)
                      .++|..+++|+|+ |+                 |+++                    |. ....+ +. + |||+|    
T Consensus       130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  209 (361)
T 3uc3_A          130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLY  209 (361)
T ss_dssp             HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHH
Confidence            9999999999996 55                 1111                    11 23344 45 8 99999    


Q ss_pred             --------CCCCC----hHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGGMT----NAEVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~~~----~~~~~~~v~~-g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+.+    ..+++..+.. ....+.+..+++++.+|+.+||+.||++|||+.++++.
T Consensus       210 ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          210 VMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence                    44322    2344444433 33444445789999999999999999999999999874

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.45  E-value=1e-15  Score=117.26  Aligned_cols=105  Identities=8%  Similarity=-0.087  Sum_probs=82.8

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC----------------------C
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT----------------------N  106 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~----------------------~  106 (189)
                      ...++......+..+.+.|+.++|..+++|||+ |+               |+++..                      .
T Consensus       118 ~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  197 (353)
T 3txo_A          118 SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ  197 (353)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcC
Confidence            345666667777888889999999999999996 55               333321                      2


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH------H
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF------E  166 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~------~  166 (189)
                      ...|+. + |||+|            |.+.+..++...+..+. +..|..+++++.+|+.+|++.||++||++      .
T Consensus       198 ~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~  276 (353)
T 3txo_A          198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEH  276 (353)
T ss_dssp             HHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTH
T ss_pred             CCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHH
Confidence            234788 9 99999            77888888888887764 45678899999999999999999999998      6


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +|++
T Consensus       277 ~il~  280 (353)
T 3txo_A          277 AILR  280 (353)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            6654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.44  E-value=7.5e-16  Score=114.73  Aligned_cols=108  Identities=9%  Similarity=-0.062  Sum_probs=76.1

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cccccccC----------CCCCccc-e-EEEec------------CCCCCh
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVHGT----------NLSGVVV-S-AVDFG------------SGGMTN  124 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~~~----------~~~~~~~-s-VwsfG------------~~~~~~  124 (189)
                      ..+.+.+..+.+.|+.++|..+++|+|+ |+.+.-..          ....++. + |||||            |.+.+.
T Consensus       128 ~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~  207 (286)
T 3uqc_A          128 PVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPEAGV  207 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence            3456667788899999999999999996 66221111          3345788 9 99999            555443


Q ss_pred             HHHHH---HHHcCCCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         125 AEVLH---QVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       125 ~~~~~---~v~~g~~~~---~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      .+.+.   ....+...+   .+..+|+++.+|+.+||+.||++| |+.++++.|+.+...
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          208 RSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             CCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             chhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            22111   111121111   235799999999999999999999 999999999987764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.44  E-value=4.4e-15  Score=112.95  Aligned_cols=165  Identities=10%  Similarity=-0.057  Sum_probs=105.8

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCce---EEEEEecCCCeeeEEEEEeccC------------CccCC---CC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDY---SLSEYKRSSFCLKMTTGRSLFE------------TQKAG---RT   66 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~---~ls~~~~~~~~v~h~~i~~~~~------------gyl~~---~~   66 (189)
                      .++|+|++++++.+......+||+|++.+ +++   .-..... ..............            +.+..   ..
T Consensus        84 ~l~hpniv~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (345)
T 3hko_A           84 KLHHPNIARLYEVYEDEQYICLVMELCHG-GHLLDKLNVFIDD-STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESL  161 (345)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEEECCCS-CBHHHHEEEEEET-TTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEEC
T ss_pred             hCCCCCcceeehhhccCCeEEEEEeCCCC-CcHHHHHHHhhcc-cccccccccccccccccccccccccccccccccccc
Confidence            46799999999988777778999999987 432   1111110 11111111111000            00000   00


Q ss_pred             C--cCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------cccc-----------------------
Q psy1684          67 T--IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------YLVH-----------------------  103 (189)
Q Consensus        67 ~--~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------~l~~-----------------------  103 (189)
                      .  +....+..+..+.+.|+.++|..+++|+|+ |+                 +++.                       
T Consensus       162 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~  241 (345)
T 3hko_A          162 DFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFV  241 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGC
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCcccc
Confidence            1  113345567778889999999999999986 54                 1111                       


Q ss_pred             --cC---CCCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcccCCCC
Q psy1684         104 --GT---NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMPCP--PGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       104 --~~---~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~~p--~~~p~~~~~l~~~C~~~~p~~  161 (189)
                        |.   ....++. + |||||            |.+.+..+....+..+ ...+.|  ..+++++.+|+.+||+.||++
T Consensus       242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  321 (345)
T 3hko_A          242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE  321 (345)
T ss_dssp             CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred             CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence              11   1256888 9 99999            7777777777777544 333333  248999999999999999999


Q ss_pred             CCCHHHHHHH
Q psy1684         162 RPTFETLQWK  171 (189)
Q Consensus       162 RP~~~~i~~~  171 (189)
                      |||+.++++.
T Consensus       322 Rps~~~~l~h  331 (345)
T 3hko_A          322 RFDAMRALQH  331 (345)
T ss_dssp             SCCHHHHHHS
T ss_pred             CCCHHHHhcC
Confidence            9999999873

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.44  E-value=2.2e-13  Score=102.32  Aligned_cols=79  Identities=29%  Similarity=0.364  Sum_probs=67.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCe---eeEEEEEe-ccC------C-ccCCCCCcC
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC---LKMTTGRS-LFE------T-QKAGRTTIH   69 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~---v~h~~i~~-~~~------g-yl~~~~~~~   69 (189)
                      ||||.|+|.+|+++|......+|+||||++ +.+|.|+||++.  .+.   ++||+|.. ...      | |..+...|.
T Consensus        43 Wyhg~i~R~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~--~~~~~~v~H~~I~~~~~~~~g~~~g~~~~~~~~F~  119 (308)
T 3qwy_A           43 FYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVRE--ADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFP  119 (308)
T ss_dssp             GEETTCCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEEC--CSSSSCEEEEEEEECCCCTTTTCCCCEEETTEEES
T ss_pred             cccCCCCHHHHHHHHhccCCCCceEEEEcc-CCCCCEEEEEEe--CCCCCceEEEEEeeccCCCcCcccceEEEeCeeeC
Confidence            999999999999999764567899999999 888999999999  888   99999987 543      6 444457888


Q ss_pred             -HhHHHHHhhhccC
Q psy1684          70 -YPELVEHYSKDAD   82 (189)
Q Consensus        70 -l~~li~~~~~~a~   82 (189)
                       +.+|+.++.....
T Consensus       120 Sl~eLv~~y~~~~~  133 (308)
T 3qwy_A          120 DIPALLNHFKMRVL  133 (308)
T ss_dssp             SHHHHHHHHHHSCS
T ss_pred             CHHHHHHHHhhccc
Confidence             9999999987765

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.44  E-value=1.7e-15  Score=115.44  Aligned_cols=111  Identities=14%  Similarity=0.121  Sum_probs=80.0

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------ccccc---------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------YLVHG---------------------  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------~l~~~---------------------  104 (189)
                      ++.....+...+...+..+.+.|+.++|..+++|+|+ |+              |++..                     
T Consensus        98 ~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a  177 (343)
T 3dbq_A           98 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP  177 (343)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CCCCSSCC
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcCCcCcCC
Confidence            4544455666677778888999999999999999996 55              22221                     


Q ss_pred             --CC------------CCCccc-e-EEEec------------CCCCC-hHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHh
Q psy1684         105 --TN------------LSGVVV-S-AVDFG------------SGGMT-NAEVLHQ-VEHGYRMPCPPGCPPRLYDIMLEC  154 (189)
Q Consensus       105 --~~------------~~~~~~-s-VwsfG------------~~~~~-~~~~~~~-v~~g~~~~~p~~~p~~~~~l~~~C  154 (189)
                        ..            ...++. + |||||            |.+.. ....+.. +........|..++.++.+|+.+|
T Consensus       178 PE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  257 (343)
T 3dbq_A          178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCC  257 (343)
T ss_dssp             HHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHH
T ss_pred             HHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHH
Confidence              10            156888 9 99999            44432 2233333 344556677888999999999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q psy1684         155 WLKDPVKRPTFETLQWK  171 (189)
Q Consensus       155 ~~~~p~~RP~~~~i~~~  171 (189)
                      |+.||.+|||+.++++.
T Consensus       258 L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          258 LKRDPKQRISIPELLAH  274 (343)
T ss_dssp             TCSSTTTSCCHHHHHTS
T ss_pred             cCCChhHCCCHHHHHhC
Confidence            99999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.44  E-value=2.5e-15  Score=114.25  Aligned_cols=145  Identities=12%  Similarity=-0.033  Sum_probs=91.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|+...+.+    +..                 ++.....+....+..+..+.+.|+
T Consensus        85 ~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~----l~~-----------------~~~~~~~l~~~~~~~i~~qi~~~L  143 (335)
T 3dls_A           85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLD----LFA-----------------FIDRHPRLDEPLASYIFRQLVSAV  143 (335)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEEECCTTSCB----HHH-----------------HHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEeeCCEEEEEEEeCCCCcc----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHH
Confidence            45666666666655544555666665544221    111                 343344556666777788889999


Q ss_pred             eeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCc-cc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGV-VV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~-~~-s-VwsfG------  118 (189)
                      .++|..+++|+|+ |+               +++                    +|. ....+ +. + |||||      
T Consensus       144 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  223 (335)
T 3dls_A          144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL  223 (335)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHH
Confidence            9999999999996 55               111                    111 33444 67 8 99999      


Q ss_pred             CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ..+..+..-.... .......|..+++++.+|+.+||+.||++|||+.++++.
T Consensus       224 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          224 VFEENPFCELEET-VEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHSSCSCSSGGGG-TTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HhCCCchhhHHHH-HhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1111100000011 112344567899999999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.43  E-value=9.5e-16  Score=114.65  Aligned_cols=105  Identities=8%  Similarity=-0.034  Sum_probs=73.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc------------------cccccCCCCCccc-e-EEEec-------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI------------------YLVHGTNLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~------------------~l~~~~~~~~~~~-s-VwsfG-------  118 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+                  |++.......++. + |||+|       
T Consensus       113 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~DiwslG~il~el~  192 (299)
T 3m2w_A          113 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILL  192 (299)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCGGGGHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccccCCchhhHHHHHHHHHHHH
Confidence            3556777888889999999999999999996 55                  2233325567899 9 99999       


Q ss_pred             -----CCCCChHHHHHHHHcC---CCCCCC----CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 -----SGGMTNAEVLHQVEHG---YRMPCP----PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 -----~~~~~~~~~~~~v~~g---~~~~~p----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                           |.+.+..++...+...   ...+.|    ..+|+++.+|+.+||+.||++|||+.++++.
T Consensus       193 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          193 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             HSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                 4443333322211111   112223    5789999999999999999999999999873

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.43  E-value=1.6e-15  Score=114.81  Aligned_cols=141  Identities=12%  Similarity=0.066  Sum_probs=95.0

Q ss_pred             hHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCceee
Q psy1684           8 RIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVN   87 (189)
Q Consensus         8 ~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~~   87 (189)
                      |+|++++++.+......|||+|++.+ ++    +..                 ++.....++..++..+..+.+.|+.++
T Consensus        65 h~niv~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~~l~~L  122 (325)
T 3kn6_A           65 HPNIVKLHEVFHDQLHTFLVMELLNG-GE----LFE-----------------RIKKKKHFSETEASYIMRKLVSAVSHM  122 (325)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCS-CB----HHH-----------------HHHHCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEEEEEcCCEEEEEEEccCC-Cc----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            67777777666555566777777665 21    111                 333344556667777888888999999


Q ss_pred             ccCCcccccc-cc------------------ccc---------------------ccC-CCCCccc-e-EEEec------
Q psy1684          88 LRKPCVQVSC-RI------------------YLV---------------------HGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        88 ~~~~~~~~~~-p~------------------~l~---------------------~~~-~~~~~~~-s-VwsfG------  118 (189)
                      |..+++|+|+ |+                  |++                     +|. ....|+. + |||+|      
T Consensus       123 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~l  202 (325)
T 3kn6_A          123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM  202 (325)
T ss_dssp             HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence            9999999996 54                  111                     111 3455888 9 99999      


Q ss_pred             ------CCCC-------ChHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ------SGGM-------TNAEVLHQVEHGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ------~~~~-------~~~~~~~~v~~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            |.+.       ...+++..+..+.....+   ..+++++.+|+.+||+.||++|||++++++
T Consensus       203 l~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          203 LSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             HhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence                  3332       235667777666432222   368999999999999999999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.43  E-value=4.7e-15  Score=111.57  Aligned_cols=143  Identities=13%  Similarity=0.062  Sum_probs=94.7

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......+||+|++.. +     +..                 ++.. ...+....+..+..+.+.|
T Consensus        75 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~~~~~~~~~~~~~~~~~~~qi~~~  131 (311)
T 3niz_A           75 ELHHPNIVSLIDVIHSERCLTLVFEFMEK-D-----LKK-----------------VLDENKTGLQDSQIKIYLYQLLRG  131 (311)
T ss_dssp             HCCCTTBCCEEEEECCSSCEEEEEECCSE-E-----HHH-----------------HHHTCTTCCCHHHHHHHHHHHHHH
T ss_pred             HcCCCCEeeeeeEEccCCEEEEEEcCCCC-C-----HHH-----------------HHHhccCCCCHHHHHHHHHHHHHH
Confidence            45677777777766656666777777653 1     111                 1221 2235566667777888899


Q ss_pred             ceeeccCCcccccc-cc---------------ccc---------------------ccC-C-CCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-N-LSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~-~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               |++                     +|. . ...++. + |||+|    
T Consensus       132 l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  211 (311)
T 3niz_A          132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA  211 (311)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHH
Confidence            99999999999996 55               222                     111 2 245888 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--CCCCC---------------------------CCCCCCHHHHHHHHHhcccCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEH--GYRMP---------------------------CPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--g~~~~---------------------------~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                              |.+.+..+.+..+..  |...+                           .++.+++++.+|+.+||+.||++
T Consensus       212 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  291 (311)
T 3niz_A          212 EMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK  291 (311)
T ss_dssp             HHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTT
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhH
Confidence                    666555444444422  11100                           12346789999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      |||++|+++
T Consensus       292 Rpt~~ell~  300 (311)
T 3niz_A          292 RISARDAMN  300 (311)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHhc
Confidence            999999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.43  E-value=6.1e-15  Score=108.72  Aligned_cols=110  Identities=6%  Similarity=-0.022  Sum_probs=75.4

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc-----------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL-----------------------  101 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l-----------------------  101 (189)
                      ++.....++..++..+..+.+.|+.++|..+++|+|+ |+               ++                       
T Consensus        95 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~  174 (276)
T 2yex_A           95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV  174 (276)
T ss_dssp             GSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGC
T ss_pred             HHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCcc
Confidence            4444445666777778888899999999999999986 44               11                       


Q ss_pred             cccC-CCCCc-cc-e-EEEec------------CCCCChH-HHHHHHHc-CCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         102 VHGT-NLSGV-VV-S-AVDFG------------SGGMTNA-EVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       102 ~~~~-~~~~~-~~-s-VwsfG------------~~~~~~~-~~~~~v~~-g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                      ++|. ....+ +. + |||||            |.+.+.. .....+.. ....+.+..+|+++.+|+.+||+.||++||
T Consensus       175 aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (276)
T 2yex_A          175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI  254 (276)
T ss_dssp             CGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             ChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCC
Confidence            1221 22343 67 8 99999            4443321 22333332 233333457899999999999999999999


Q ss_pred             CHHHHHH
Q psy1684         164 TFETLQW  170 (189)
Q Consensus       164 ~~~~i~~  170 (189)
                      |+++|++
T Consensus       255 s~~~il~  261 (276)
T 2yex_A          255 TIPDIKK  261 (276)
T ss_dssp             CHHHHTT
T ss_pred             CHHHHhc
Confidence            9999876

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.43  E-value=2.4e-15  Score=114.72  Aligned_cols=143  Identities=9%  Similarity=-0.011  Sum_probs=96.8

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++........|||+|++.++.     +..                 ++.....++..+...+..+++.|+.+
T Consensus        74 ~hp~iv~~~~~~~~~~~~~lv~E~~~gg~-----L~~-----------------~i~~~~~~~~~~~~~~~~qi~~al~~  131 (342)
T 2qr7_A           74 QHPNIITLKDVYDDGKYVYVVTELMKGGE-----LLD-----------------KILRQKFFSEREASAVLFTITKTVEY  131 (342)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEeCCCCCc-----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            45666665555544444566666655411     111                 33334456667777788888999999


Q ss_pred             eccCCcccccc-ccccc-------------------ccC----------------------CCCCccc-e-EEEec----
Q psy1684          87 NLRKPCVQVSC-RIYLV-------------------HGT----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~~l~-------------------~~~----------------------~~~~~~~-s-VwsfG----  118 (189)
                      +|..+++|+|+ |+.+.                   ...                      ....|+. + |||+|    
T Consensus       132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  211 (342)
T 2qr7_A          132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLY  211 (342)
T ss_dssp             HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHH
Confidence            99999999996 55221                   100                      1123778 8 99999    


Q ss_pred             --------CCC---CChHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 --------SGG---MTNAEVLHQVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 --------~~~---~~~~~~~~~v~~g~~~~---~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                              |.+   .+..++...+..+....   .+..+++++.+|+.+||..||++|||+.++++.
T Consensus       212 ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          212 TMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                    433   35677888887764332   235789999999999999999999999999863

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.43  E-value=2.9e-15  Score=112.57  Aligned_cols=104  Identities=13%  Similarity=0.107  Sum_probs=77.4

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLS  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~  108 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |.               +++                     +|. ...
T Consensus       121 ~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  200 (314)
T 3com_A          121 TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  200 (314)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCC
Confidence            4556667777888889999999999999986 54               111                     111 344


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||||            |.+.+..+....+..+..  ...|..+|.++.+|+.+||+.||.+|||+.++++
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            5788 9 99999            666666665555544432  2345678999999999999999999999999976

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=1e-14  Score=111.28  Aligned_cols=144  Identities=13%  Similarity=-0.018  Sum_probs=94.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......+||+|++.. +     +..                 ++.. ...++..++..+..+.+.|
T Consensus        68 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~~~~~~~~~~~~~~~~~~~qi~~~  124 (346)
T 1ua2_A           68 ELSHPNIIGLLDAFGHKSNISLVFDFMET-D-----LEV-----------------IIKDNSLVLTPSHIKAYMLMTLQG  124 (346)
T ss_dssp             HCCCTTBCCEEEEECCTTCCEEEEECCSE-E-----HHH-----------------HHTTCCSSCCSSHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEeeCCceEEEEEcCCC-C-----HHH-----------------HHHhcCcCCCHHHHHHHHHHHHHH
Confidence            35677777777666555666777776653 1     111                 2222 2234455666777788889


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-CC-CCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NL-SGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~-~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               |++.                     |. .. ..++. + |||+|    
T Consensus       125 l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  204 (346)
T 1ua2_A          125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA  204 (346)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHH
Confidence            99999999999996 55               2222                     11 12 34788 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--CCC--------------------CCCC-----CCCCHHHHHHHHHhcccCCCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEH--GYR--------------------MPCP-----PGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--g~~--------------------~~~p-----~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                              |.+.+..+.+..+..  |..                    +..|     ..++.++.+|+.+||+.||++||
T Consensus       205 ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  284 (346)
T 1ua2_A          205 ELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI  284 (346)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCC
Confidence                    666666665555532  110                    0011     45678999999999999999999


Q ss_pred             CHHHHHHH
Q psy1684         164 TFETLQWK  171 (189)
Q Consensus       164 ~~~~i~~~  171 (189)
                      |++|+++.
T Consensus       285 t~~ell~h  292 (346)
T 1ua2_A          285 TATQALKM  292 (346)
T ss_dssp             CHHHHHTS
T ss_pred             CHHHHhcC
Confidence            99999864

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.43  E-value=3.5e-13  Score=108.36  Aligned_cols=90  Identities=27%  Similarity=0.369  Sum_probs=76.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-c-cCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-Q-KAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-y-l~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|.. .+| | +.+...|. +.+|++||
T Consensus         4 Wyhg~i~r~~Ae~lL~~~~-~~G~FLvR~S~~~~g~~~Lsv~~--~~~v~H~~I~~-~~~~~~~~~~~~F~sl~~Lv~~y   79 (532)
T 2b3o_A            4 WFHRDLSGLDAETLLKGRG-VHGSFLARPSRKNQGDFSLSVRV--GDQVTHIRIQN-SGDFYDLYGGEKFATLTELVEYY   79 (532)
T ss_dssp             TBCSSCCHHHHHHHHHHHC-CTTEEEEEECSSSSSEEEEEEEE--TTEEEEEEEEC-SSSCEEETTSCEESCHHHHHHHH
T ss_pred             ceeCCCCHHHHHHHHHhcC-CCCCEEEecCCCCCCceEEEEEE--CCEEEEEEEEe-cCCEEEECCCcccCCHHHHHHHH
Confidence            9999999999999996443 67999999999888999999999  99999999986 444 4 76677888 99999999


Q ss_pred             hhcc------CCceeeccCCccc
Q psy1684          78 SKDA------DGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a------~gl~~~~~~~~~~   94 (189)
                      ....      +|+...+..|+..
T Consensus        80 ~~~~~~l~~~~g~~~~L~~P~~~  102 (532)
T 2b3o_A           80 TQQQGVLQDRDGTIIHLKYPLNC  102 (532)
T ss_dssp             HTTCSCBCCSSSCCBCCCEECCC
T ss_pred             HhcccccccccCchhhccccccc
Confidence            9876      6777777776654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.42  E-value=2.2e-15  Score=113.05  Aligned_cols=107  Identities=14%  Similarity=0.180  Sum_probs=75.5

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC--
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT--  105 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~--  105 (189)
                      ...++...+..+..+.+.|+.++|..+++|+|+ |+               |++                     +|.  
T Consensus        96 ~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (311)
T 4agu_A           96 QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV  175 (311)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHh
Confidence            334556666777778889999999999999996 54               221                     111  


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--------------------CCCCCCC----------C
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--------------------GYRMPCP----------P  141 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--------------------g~~~~~p----------~  141 (189)
                      ....++. + |||+|            |.+.+..+....+.+                    +...+.|          +
T Consensus       176 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (311)
T 4agu_A          176 GDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFP  255 (311)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCT
T ss_pred             cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcc
Confidence            1355788 9 99999            666665555444321                    1222222          3


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++.++.+|+.+||+.||++|||++++++.
T Consensus       256 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          256 NISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            678899999999999999999999999863

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.42  E-value=6.9e-15  Score=112.66  Aligned_cols=109  Identities=15%  Similarity=0.036  Sum_probs=84.0

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------  105 (189)
                      ++.....+.......+..+++.|+.++|..+++|||+ |+               |+++..                   
T Consensus       111 ~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  190 (353)
T 2i0e_A          111 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAP  190 (353)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCH
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccCh
Confidence            3433345666667778888899999999999999996 55               333321                   


Q ss_pred             ---CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH---
Q psy1684         106 ---NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF---  165 (189)
Q Consensus       106 ---~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~---  165 (189)
                         ....|+. + |||+|            |.+.+..++...+..+. +..|..+++++.+|+.+||..||++||++   
T Consensus       191 E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~  269 (353)
T 2i0e_A          191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE  269 (353)
T ss_dssp             HHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTT
T ss_pred             hhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence               3456889 9 99999            77777888888886653 55778999999999999999999999964   


Q ss_pred             --HHHHH
Q psy1684         166 --ETLQW  170 (189)
Q Consensus       166 --~~i~~  170 (189)
                        .+|++
T Consensus       270 ~~~~i~~  276 (353)
T 2i0e_A          270 GERDIKE  276 (353)
T ss_dssp             HHHHHHT
T ss_pred             CHHHHhc
Confidence              66654

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.42  E-value=6.8e-13  Score=107.89  Aligned_cols=90  Identities=27%  Similarity=0.376  Sum_probs=75.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+|++||.
T Consensus         4 Wy~g~isr~~Ae~lL~~~~-~~G~FLvR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv~~y~   80 (595)
T 3ps5_A            4 WFHRDLSGLDAETLLKGRG-VHGSFLARPSRKNQGDFSLSVRV--GDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYT   80 (595)
T ss_dssp             CCCSSCCHHHHHHHHHHHC-CTTCEEEEECSSSTTSEEEEEEE--TTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhCC-CCCEEEEeecCCCCCceEEEEEE--CCEEEEEEEEeCCCcEEEecCccccchhhhhhhhc
Confidence            9999999999999996443 58999999999999999999999  999999999876555 688888899 999999999


Q ss_pred             hcc------CCceeeccCCcc
Q psy1684          79 KDA------DGLCVNLRKPCV   93 (189)
Q Consensus        79 ~~a------~gl~~~~~~~~~   93 (189)
                      ...      +|+...+..|+.
T Consensus        81 ~~~~~l~~~~g~~i~L~~P~~  101 (595)
T 3ps5_A           81 QQQGVLQDRDGTIIHLKYPLN  101 (595)
T ss_dssp             TTSSCCBCSSCCBCCCCCBCC
T ss_pred             cCccccccccccccccccccc
Confidence            863      355555555543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.42  E-value=3.5e-15  Score=114.32  Aligned_cols=145  Identities=12%  Similarity=-0.006  Sum_probs=94.2

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++.+......+||+|++.+ ++    +..                 ++.....++...+..+..+.+.|+
T Consensus        87 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~----L~~-----------------~l~~~~~~~~~~~~~i~~~i~~~l  144 (360)
T 3eqc_A           87 ECNSPYIVGFYGAFYSDGEISICMEHMDG-GS----LDQ-----------------VLKKAGRIPEQILGKVSIAVIKGL  144 (360)
T ss_dssp             GCCCTTBCCEEEEEEETTEEEEEECCCTT-CB----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             HCCCCCEEEEeEEEEECCEEEEEEECCCC-CC----HHH-----------------HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            45677777766655555556677776654 21    111                 222223444556666777888899


Q ss_pred             eeeccC-Ccccccc-cc---------------ccc-------------------ccC-CCCCccc-e-EEEec-------
Q psy1684          85 CVNLRK-PCVQVSC-RI---------------YLV-------------------HGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        85 ~~~~~~-~~~~~~~-p~---------------~l~-------------------~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      .++|.. +++|+|+ |+               +++                   +|. ....++. + |||||       
T Consensus       145 ~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  224 (360)
T 3eqc_A          145 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA  224 (360)
T ss_dssp             HHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence            999986 8999996 54               111                   111 3456889 9 99999       


Q ss_pred             -----CCCCChHH------------------------------------------HHHHHHcCCCCCCC-CCCCHHHHHH
Q psy1684         119 -----SGGMTNAE------------------------------------------VLHQVEHGYRMPCP-PGCPPRLYDI  150 (189)
Q Consensus       119 -----~~~~~~~~------------------------------------------~~~~v~~g~~~~~p-~~~p~~~~~l  150 (189)
                           |.+.+..+                                          +...+..+..+..| ..++.++.+|
T Consensus       225 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (360)
T 3eqc_A          225 VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF  304 (360)
T ss_dssp             HTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHH
Confidence                 44433332                                          23333344334333 3578999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+||+.||++|||++++++.
T Consensus       305 i~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          305 VNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHhhcChhhCCCHHHHhhC
Confidence            999999999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.42  E-value=1e-14  Score=114.08  Aligned_cols=142  Identities=11%  Similarity=0.053  Sum_probs=94.2

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      ++|+|++++++.+. .+..|||+|++.++.     +..                 ++.....+.......+..+.+.|+.
T Consensus       197 l~hpniv~l~~~~~-~~~~~lv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~~l~  253 (419)
T 3i6u_A          197 LNHPCIIKIKNFFD-AEDYYIVLELMEGGE-----LFD-----------------KVVGNKRLKEATCKLYFYQMLLAVQ  253 (419)
T ss_dssp             CCCTTBCCCCEEEE-SSEEEEEEECCTTCB-----GGG-----------------GTSSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEeeEEEEEe-cCceEEEEEcCCCCc-----HHH-----------------HHhccCCCCHHHHHHHHHHHHHHHH
Confidence            45666666555432 233566666665421     111                 3444455666777777888899999


Q ss_pred             eeccCCcccccc-cc--------------------------------------cccccCC----CCCccc-e-EEEec--
Q psy1684          86 VNLRKPCVQVSC-RI--------------------------------------YLVHGTN----LSGVVV-S-AVDFG--  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~--------------------------------------~l~~~~~----~~~~~~-s-VwsfG--  118 (189)
                      ++|..+++|+|+ |+                                      ++|+|..    ...|+. + |||||  
T Consensus       254 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i  333 (419)
T 3i6u_A          254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI  333 (419)
T ss_dssp             HHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHH
T ss_pred             HHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHH
Confidence            999999999996 55                                      1122221    356888 9 99999  


Q ss_pred             ----------CCCCCh-HHHHHHHHcCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ----------SGGMTN-AEVLHQVEHGYRMPCP---PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ----------~~~~~~-~~~~~~v~~g~~~~~p---~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                |.+... ..+...+..+.....|   ..+++++.+|+.+||+.||++|||++++++
T Consensus       334 l~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          334 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                      444322 2344555555433333   578999999999999999999999999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.42  E-value=2.5e-15  Score=113.66  Aligned_cols=143  Identities=13%  Similarity=0.018  Sum_probs=94.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++.+......+||+|++.. +     +..                 ++.. ...+....+..+..+.+.|
T Consensus        56 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~~~~~~~~~~~~~~~~~~~qi~~a  112 (324)
T 3mtl_A           56 DLKHANIVTLHDIIHTEKSLTLVFEYLDK-D-----LKQ-----------------YLDDCGNIINMHNVKLFLFQLLRG  112 (324)
T ss_dssp             CCCCTTBCCEEEEEECSSCEEEEEECCSE-E-----HHH-----------------HHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCeeeeEEeeCCEEEEEeccccc-C-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            45666666666655555555666666542 1     111                 2222 2234466677777888899


Q ss_pred             ceeeccCCcccccc-cc---------------ccc---------------------ccC-C-CCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-N-LSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~-~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               |++                     +|. . ...++. + |||+|    
T Consensus       113 L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  192 (324)
T 3mtl_A          113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY  192 (324)
T ss_dssp             HHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHH
Confidence            99999999999996 55               211                     111 2 245888 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCCC-----------------------------CCCCCCHHHHHHHHHhcccCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRMP-----------------------------CPPGCPPRLYDIMLECWLKDPVK  161 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~~-----------------------------~p~~~p~~~~~l~~~C~~~~p~~  161 (189)
                              |.+.+..+.+..+.+....+                             .++.+++++.+|+.+|++.||++
T Consensus       193 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  272 (324)
T 3mtl_A          193 EMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRN  272 (324)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCccc
Confidence                    77777766665553321111                             11356789999999999999999


Q ss_pred             CCCHHHHHH
Q psy1684         162 RPTFETLQW  170 (189)
Q Consensus       162 RP~~~~i~~  170 (189)
                      |||++|+++
T Consensus       273 R~t~~e~l~  281 (324)
T 3mtl_A          273 RISAEDAMK  281 (324)
T ss_dssp             SCCHHHHTT
T ss_pred             CCCHHHHhc
Confidence            999999987

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.42  E-value=1e-14  Score=110.37  Aligned_cols=112  Identities=8%  Similarity=0.047  Sum_probs=78.7

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCC--cccccc-cc---------------ccc-------------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKP--CVQVSC-RI---------------YLV-------------------------  102 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~--~~~~~~-p~---------------~l~-------------------------  102 (189)
                      ..+....+..+..+.+.|+.++|...  ++|+|+ |+               +++                         
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (337)
T 3ll6_A          131 GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR  210 (337)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccc
Confidence            34557777788889999999999988  999996 54               222                         


Q ss_pred             --------ccC----CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcc
Q psy1684         103 --------HGT----NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       103 --------~~~----~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~  156 (189)
                              +|.    ....++. + |||||            |.+...   ...+......+.+..++..+.+|+.+||+
T Consensus       211 ~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~  287 (337)
T 3ll6_A          211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK---LRIVNGKYSIPPHDTQYTVFHSLIRAMLQ  287 (337)
T ss_dssp             -------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------CCCCTTCCSSGGGHHHHHHHSC
T ss_pred             cCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH---HHhhcCcccCCcccccchHHHHHHHHHcc
Confidence                    111    2334788 8 99999            333222   22233444556667889999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         157 KDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                      .||++|||+.++++.|+.+.....
T Consensus       288 ~~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          288 VNPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             CChhhCcCHHHHHHHHHHHHhccC
Confidence            999999999999999999887543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.41  E-value=7.1e-15  Score=109.72  Aligned_cols=153  Identities=12%  Similarity=0.037  Sum_probs=94.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.+...+..++|+|+..++.     +..    .+.+    .... -......++...+..+..+.+.|
T Consensus        68 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~----~l~~----~~~~-~~~~~~~~~~~~~~~i~~qi~~~  133 (303)
T 2vwi_A           68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS-----VLD----IIKH----IVAK-GEHKSGVLDESTIATILREVLEG  133 (303)
T ss_dssp             CCCCCTTBCCEEEEEESSSCEEEEEECCTTCB-----HHH----HHHH----HHHT-TTTTTCSSCHHHHHHHHHHHHHH
T ss_pred             hhcCCCCEeeEEEEEeecCCcEEEehhccCCc-----hHH----HHHH----Hhhc-cccccCCCCHHHHHHHHHHHHHH
Confidence            45566666666665555555666666665421     111    0000    0000 00012335566777788888999


Q ss_pred             ceeeccCCcccccc-cc---------------ccc--------------------------ccCC-C-CCccc-e-EEEe
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV--------------------------HGTN-L-SGVVV-S-AVDF  117 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~--------------------------~~~~-~-~~~~~-s-Vwsf  117 (189)
                      +.++|..+++|+|+ |+               +++                          +|.. . ..++. + ||||
T Consensus       134 l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  213 (303)
T 2vwi_A          134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF  213 (303)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHH
T ss_pred             HHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHH
Confidence            99999999999996 54               111                          1100 1 34788 8 9999


Q ss_pred             c------------CCCCChHHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         118 G------------SGGMTNAEVLHQVEHGYRM---------PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v~~g~~~---------~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |            |.+.+..+.......+..+         ..+..+|.++.+|+.+||+.||++|||+.++++
T Consensus       214 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          214 GITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            9            5555554444443333222         123568899999999999999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.41  E-value=1e-14  Score=113.24  Aligned_cols=136  Identities=7%  Similarity=-0.061  Sum_probs=90.9

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++........|||+|++.+ |++    ..                 ++.....+.......+..+++.|+.+
T Consensus       111 ~hp~Iv~l~~~~~~~~~~~lV~E~~~g-g~L----~~-----------------~l~~~~~l~~~~~~~~~~qi~~aL~~  168 (396)
T 4dc2_A          111 NHPFLVGLHSCFQTESRLFFVIEYVNG-GDL----MF-----------------HMQRQRKLPEEHARFYSAEISLALNY  168 (396)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTT-CBH----HH-----------------HHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCeeEEEEEECCEEEEEEEcCCC-CcH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            456666655554444555666666654 211    11                 23323445566667777888899999


Q ss_pred             eccCCcccccc-cc---------------cccccC----------------------CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVHGT----------------------NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~~~----------------------~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+++|||+ |+               |+++..                      ....|+. + |||+|        
T Consensus       169 LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~  248 (396)
T 4dc2_A          169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  248 (396)
T ss_dssp             HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence            99999999996 55               333321                      4456889 9 99999        


Q ss_pred             ----CCCC---------ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         119 ----SGGM---------TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       119 ----~~~~---------~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                          |.+.         ....+...+..+ .+..|..+++++.+|+.+||+.||++||++
T Consensus       249 G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          249 GRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             SSCSSTTTTC------CCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCCCCcccccccccchhhHHHHHHHHhcc-ccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence                4321         122344444443 466788999999999999999999999995

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.41  E-value=2.6e-15  Score=113.23  Aligned_cols=150  Identities=11%  Similarity=-0.015  Sum_probs=99.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..+||+|++.+ +     +...    +     ....  .......+....+..+..+.+.|
T Consensus        58 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~-----L~~~----l-----~~~~--~~~~~~~~~~~~~~~~~~qi~~a  120 (317)
T 2pmi_A           58 KELKHENIVRLYDVIHTENKLTLVFEFMDN-D-----LKKY----M-----DSRT--VGNTPRGLELNLVKYFQWQLLQG  120 (317)
T ss_dssp             TTCCBTTBCCEEEEECCTTEEEEEEECCCC-B-----HHHH----H-----HHHH--SSSCCCCCCHHHHHHHHHHHHHH
T ss_pred             HhcCCCCcceEEEEEEECCeEEEEEEecCC-C-----HHHH----H-----Hhcc--ccccccCCCHHHHHHHHHHHHHH
Confidence            467888888888877766777888888763 2     1110    0     0000  00111234456666677788899


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-C-CCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-N-LSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~-~~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|+|+ |+               |++.                     |. . ...++. + |||+|    
T Consensus       121 L~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  200 (317)
T 2pmi_A          121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILA  200 (317)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHH
Confidence            99999999999996 55               2221                     11 1 235888 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--CCC-------------------------------CCCCCCCCHHHHHHHHHhccc
Q psy1684         119 --------SGGMTNAEVLHQVEH--GYR-------------------------------MPCPPGCPPRLYDIMLECWLK  157 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--g~~-------------------------------~~~p~~~p~~~~~l~~~C~~~  157 (189)
                              |.+.+..+.+..+.+  |..                               +..+..++.++.+|+.+||+.
T Consensus       201 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  280 (317)
T 2pmi_A          201 EMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQL  280 (317)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCS
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCC
Confidence                    777776666555522  110                               011235788999999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy1684         158 DPVKRPTFETLQW  170 (189)
Q Consensus       158 ~p~~RP~~~~i~~  170 (189)
                      ||++|||++++++
T Consensus       281 dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          281 NPDMRLSAKQALH  293 (317)
T ss_dssp             SGGGSCCHHHHTT
T ss_pred             CcccCCCHHHHhC
Confidence            9999999999976

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.41  E-value=7.1e-15  Score=110.23  Aligned_cols=103  Identities=16%  Similarity=0.039  Sum_probs=76.1

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc--------------------cC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~  110 (189)
                      ++...+..+..+.+.|+.++|...++|+|+ |+               +++.                    |. ....+
T Consensus       117 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  196 (308)
T 3g33_A          117 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTY  196 (308)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCC
Confidence            557777788889999999999999999996 55               2221                    11 35568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCC--------------------------CCCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP--------------------------CPPGCPPRLYDI  150 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~--------------------------~p~~~p~~~~~l  150 (189)
                      +. + |||+|            |.+.+..+.+..+.+....+                          .++.+++++.+|
T Consensus       197 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  276 (308)
T 3g33_A          197 ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQL  276 (308)
T ss_dssp             CSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHH
Confidence            88 9 99999            66666666665553211111                          113578899999


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.+||+.||++|||+.++++
T Consensus       277 i~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          277 LLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHhcCCCccCCCHHHHhc
Confidence            99999999999999999886

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.40  E-value=1.5e-14  Score=119.24  Aligned_cols=109  Identities=15%  Similarity=0.036  Sum_probs=86.2

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------  105 (189)
                      ++.....+.......+..+++.|+.++|..+++|||+ |+               |+++..                   
T Consensus       432 ~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~AP  511 (674)
T 3pfq_A          432 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAP  511 (674)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCH
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCH
Confidence            3333345666667778888999999999999999996 55               333321                   


Q ss_pred             ---CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH---
Q psy1684         106 ---NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF---  165 (189)
Q Consensus       106 ---~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~---  165 (189)
                         ....|+. + |||||            |.+.+..++...+..+. +..|..+++++.+|+.+||+.||++||++   
T Consensus       512 E~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~  590 (674)
T 3pfq_A          512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE  590 (674)
T ss_dssp             HHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC-CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTT
T ss_pred             hhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHccCCHHHCCCCCCC
Confidence               4567899 9 99999            78888888888887653 56788999999999999999999999998   


Q ss_pred             --HHHHH
Q psy1684         166 --ETLQW  170 (189)
Q Consensus       166 --~~i~~  170 (189)
                        ++|++
T Consensus       591 ~~~ei~~  597 (674)
T 3pfq_A          591 GERDIKE  597 (674)
T ss_dssp             HHHHHHS
T ss_pred             cHHHHhc
Confidence              66654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.40  E-value=8e-15  Score=110.21  Aligned_cols=111  Identities=14%  Similarity=0.114  Sum_probs=79.7

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------ccc-----------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------YLV-----------------------  102 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------~l~-----------------------  102 (189)
                      ++.....+...+...+..+.+.|+.++|..+++|+|+ |+              +++                       
T Consensus       117 ~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a  196 (313)
T 3cek_A          117 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP  196 (313)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------CCGGGCC
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCCCCCcCC
Confidence            4444445556667777888899999999999999996 54              222                       


Q ss_pred             ccCC------------CCCccc-e-EEEec------------CCCCC-hHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHh
Q psy1684         103 HGTN------------LSGVVV-S-AVDFG------------SGGMT-NAEVLHQ-VEHGYRMPCPPGCPPRLYDIMLEC  154 (189)
Q Consensus       103 ~~~~------------~~~~~~-s-VwsfG------------~~~~~-~~~~~~~-v~~g~~~~~p~~~p~~~~~l~~~C  154 (189)
                      +|..            ...++. + |||||            |.+.. ....... +..+.+.+.|..++.++.+|+.+|
T Consensus       197 PE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  276 (313)
T 3cek_A          197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCC  276 (313)
T ss_dssp             HHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHH
T ss_pred             HHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHH
Confidence            1111            136888 9 99999            44432 2233333 344556677888999999999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q psy1684         155 WLKDPVKRPTFETLQWK  171 (189)
Q Consensus       155 ~~~~p~~RP~~~~i~~~  171 (189)
                      |+.||++|||+.++++.
T Consensus       277 l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          277 LKRDPKQRISIPELLAH  293 (313)
T ss_dssp             TCSSTTTSCCHHHHHTS
T ss_pred             ccCCcccCcCHHHHhcC
Confidence            99999999999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.40  E-value=3.9e-15  Score=110.97  Aligned_cols=110  Identities=15%  Similarity=0.057  Sum_probs=80.0

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc--------------------c
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH--------------------G  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~  104 (189)
                      ++.....++...+..+..+.+.|+.++|..+++|+|+ |.               +++.                    |
T Consensus       114 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  193 (298)
T 1phk_A          114 YLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE  193 (298)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHH
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHH
Confidence            3333334556667777888889999999999999986 44               1111                    1


Q ss_pred             C-------CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHhcccCCC
Q psy1684         105 T-------NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGY-RMPCP--PGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       105 ~-------~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~-~~~~p--~~~p~~~~~l~~~C~~~~p~  160 (189)
                      .       ....++. + |||||            |.+.+..++...+..+. ..+.|  ..+|.++.+|+.+||+.||+
T Consensus       194 ~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  273 (298)
T 1phk_A          194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ  273 (298)
T ss_dssp             HHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGG
T ss_pred             HhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcc
Confidence            1       1345788 9 99999            66666677777776553 23323  46899999999999999999


Q ss_pred             CCCCHHHHHH
Q psy1684         161 KRPTFETLQW  170 (189)
Q Consensus       161 ~RP~~~~i~~  170 (189)
                      +|||+.++++
T Consensus       274 ~Rps~~~ll~  283 (298)
T 1phk_A          274 KRYTAEEALA  283 (298)
T ss_dssp             GSCCHHHHTT
T ss_pred             cCCCHHHHHh
Confidence            9999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.40  E-value=1.7e-14  Score=110.73  Aligned_cols=68  Identities=6%  Similarity=-0.113  Sum_probs=45.8

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      +|+|+++++.+....+..|||+|+++++.     +..                 ++   ..++..+...+..+...|+.|
T Consensus        78 ~h~nIv~l~~~~~~~~~~~lvmE~~~g~~-----L~~-----------------~~---~~l~~~~~~~~~~qll~al~y  132 (361)
T 4f9c_A           78 GQDNVMGVKYCFRKNDHVVIAMPYLEHES-----FLD-----------------IL---NSLSFQEVREYMLNLFKALKR  132 (361)
T ss_dssp             SBTTBCCCSEEEEETTEEEEEEECCCCCC-----HHH-----------------HH---TTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCceEEEEEEECCEEEEEEeCCCccc-----HHH-----------------HH---cCCCHHHHHHHHHHHHHHHHH
Confidence            46677766655545555677777766522     111                 22   134566677778888999999


Q ss_pred             eccCCcccccc-cc
Q psy1684          87 NLRKPCVQVSC-RI   99 (189)
Q Consensus        87 ~~~~~~~~~~~-p~   99 (189)
                      +|..+++|||+ |+
T Consensus       133 lH~~gIiHRDiKPe  146 (361)
T 4f9c_A          133 IHQFGIVHRDVKPS  146 (361)
T ss_dssp             HHHTTEECSCCSGG
T ss_pred             HHHCCeEeCcCCHH
Confidence            99999999996 66

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.40  E-value=8.9e-16  Score=115.95  Aligned_cols=99  Identities=10%  Similarity=0.001  Sum_probs=70.7

Q ss_pred             HHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------------------
Q psy1684          72 ELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------------  105 (189)
Q Consensus        72 ~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------------  105 (189)
                      .+..+..+.+.|+.++|..+++|+|+ |+               |++...                              
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            45677788899999999999999996 55               222110                              


Q ss_pred             ----CCCCccc-e-EEEec------CCCCC----hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         106 ----NLSGVVV-S-AVDFG------SGGMT----NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       106 ----~~~~~~~-s-VwsfG------~~~~~----~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                          ....++. + |||+|      ..+..    ..++...+..+..+..+...++++.+|+.+||+.||++|||+++++
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  324 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII  324 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHh
Confidence                2346788 9 99999      22222    2233344445544434456778899999999999999999999988


Q ss_pred             H
Q psy1684         170 W  170 (189)
Q Consensus       170 ~  170 (189)
                      +
T Consensus       325 ~  325 (332)
T 3qd2_B          325 E  325 (332)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.40  E-value=2.8e-15  Score=111.68  Aligned_cols=105  Identities=11%  Similarity=-0.006  Sum_probs=74.1

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc---------------------cC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~  107 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |+               |++.                     |. ..
T Consensus        96 ~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  175 (292)
T 3o0g_A           96 GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG  175 (292)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcC
Confidence            34556667777888899999999999999996 55               2221                     11 23


Q ss_pred             CC-ccc-e-EEEec-------------CCCCChHHHHHHHHcCCC----------------------------CCCCCCC
Q psy1684         108 SG-VVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYR----------------------------MPCPPGC  143 (189)
Q Consensus       108 ~~-~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~----------------------------~~~p~~~  143 (189)
                      .. ++. + |||+|             |.+.+..+.+..+.+...                            ...++.+
T Consensus       176 ~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (292)
T 3o0g_A          176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKL  255 (292)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTC
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhccccc
Confidence            33 788 9 99999             445555555555422100                            0112357


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++++.+|+.+|++.||++|||++|+++
T Consensus       256 ~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          256 NATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            889999999999999999999999886

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.40  E-value=9.5e-15  Score=112.29  Aligned_cols=105  Identities=12%  Similarity=-0.002  Sum_probs=78.8

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc--------------------cC----
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH--------------------GT----  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~~----  105 (189)
                      ..+....+..+..+++.|+.++|..+++|+|+ |.               |++.                    |.    
T Consensus       195 ~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  274 (365)
T 2y7j_A          195 VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCS  274 (365)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhcccc
Confidence            34556667778888899999999999999996 55               2221                    11    


Q ss_pred             ---CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC-CCC--CCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         106 ---NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM-PCP--PGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       106 ---~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~-~~p--~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                         ....++. + |||||            |.+.+..++...+..+... +.|  ..+|.++.+|+.+||+.||++|||+
T Consensus       275 ~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~  354 (365)
T 2y7j_A          275 MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA  354 (365)
T ss_dssp             TCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             ccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCH
Confidence               1235888 9 99999            6666667777777665432 222  5789999999999999999999999


Q ss_pred             HHHHH
Q psy1684         166 ETLQW  170 (189)
Q Consensus       166 ~~i~~  170 (189)
                      .++++
T Consensus       355 ~ell~  359 (365)
T 2y7j_A          355 EQALQ  359 (365)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99986

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.40  E-value=7.1e-13  Score=106.40  Aligned_cols=91  Identities=26%  Similarity=0.361  Sum_probs=74.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|..|+++|.... .+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+|++||.
T Consensus         6 Wyhg~i~r~~Ae~lL~~~~-~~G~FLvR~S~~~~g~~~Lsv~~--~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLv~~y~   82 (525)
T 2shp_A            6 WFHPNITGVEAENLLLTRG-VDGSFLARPSKSNPGDLTLSVRR--NGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYM   82 (525)
T ss_dssp             TBCSSCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHhCC-CCCcEEeeccCCCCCcEEEEEEE--CCEEEEEEEEecCCeEEECCCCeECCHHHHHHHHH
Confidence            9999999999999996443 67999999999888999999999  999999999865444 577778898 999999998


Q ss_pred             hcc------CCceeeccCCccc
Q psy1684          79 KDA------DGLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a------~gl~~~~~~~~~~   94 (189)
                      ...      +|....+..|+..
T Consensus        83 ~~~~~l~~~~g~~i~L~~Pv~~  104 (525)
T 2shp_A           83 EHHGQLKEKNGDVIELKYPLNC  104 (525)
T ss_dssp             TCTTCSBSSSSCBCCCCEECCC
T ss_pred             hCCccccccccccccccccccc
Confidence            775      3545555555543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.39  E-value=7.5e-15  Score=111.22  Aligned_cols=113  Identities=12%  Similarity=0.045  Sum_probs=81.4

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------------cccccC-------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------YLVHGT-------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------~l~~~~-------------------  105 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |+                    |++...                   
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~g  179 (330)
T 2izr_A          100 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG  179 (330)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCC
Confidence            45667778888889999999999999999996 55                    111100                   


Q ss_pred             ----------CCCCccc-e-EEEec------------CCCCC---hHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHh
Q psy1684         106 ----------NLSGVVV-S-AVDFG------------SGGMT---NAEVLHQVEHGYRMPC----PPGCPPRLYDIMLEC  154 (189)
Q Consensus       106 ----------~~~~~~~-s-VwsfG------------~~~~~---~~~~~~~v~~g~~~~~----p~~~p~~~~~l~~~C  154 (189)
                                ....++. + |||||            |.+.+   ..+.+..+..+.....    ...+| ++.+|+..|
T Consensus       180 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~  258 (330)
T 2izr_A          180 TARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYV  258 (330)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHH
T ss_pred             CccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHH
Confidence                      2345788 9 99999            55543   3344444433322111    23466 999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         155 WLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       155 ~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      |+.||.+||++.+|.+.|+.+++..
T Consensus       259 l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          259 RRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            9999999999999999999988754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.39  E-value=2.7e-14  Score=108.07  Aligned_cols=105  Identities=14%  Similarity=0.140  Sum_probs=79.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cccc------------------c--------------------ccC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL------------------V--------------------HGT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l------------------~--------------------~~~-~  106 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |+.+                  +                    +|. .
T Consensus       127 ~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  206 (327)
T 3lm5_A          127 MVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN  206 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeec
Confidence            4556777788888999999999999999996 5511                  1                    111 3


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGY---RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~---~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      ...++. + |||+|            |.+.+..+....+....   ..+.+..+++++.+|+.+||+.||++|||+++++
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll  286 (327)
T 3lm5_A          207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL  286 (327)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            456888 9 99999            66777777666664432   2334467999999999999999999999999997


Q ss_pred             HH
Q psy1684         170 WK  171 (189)
Q Consensus       170 ~~  171 (189)
                      +.
T Consensus       287 ~h  288 (327)
T 3lm5_A          287 SH  288 (327)
T ss_dssp             TC
T ss_pred             CC
Confidence            63

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.39  E-value=9.5e-15  Score=110.25  Aligned_cols=110  Identities=10%  Similarity=0.008  Sum_probs=77.9

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cccc--------------------------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL--------------------------------------  101 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l--------------------------------------  101 (189)
                      ++.....+.......+..+.+.|+.++|..+++|+|+ |+.+                                      
T Consensus       104 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~  183 (322)
T 2ycf_A          104 KVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL  183 (322)
T ss_dssp             HHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTC
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCcc
Confidence            3444455666667777788899999999999999996 5411                                      


Q ss_pred             cccC----CCCCccc-e-EEEec------------CCCCCh-HHHHHHHHcCCCCCC---CCCCCHHHHHHHHHhcccCC
Q psy1684         102 VHGT----NLSGVVV-S-AVDFG------------SGGMTN-AEVLHQVEHGYRMPC---PPGCPPRLYDIMLECWLKDP  159 (189)
Q Consensus       102 ~~~~----~~~~~~~-s-VwsfG------------~~~~~~-~~~~~~v~~g~~~~~---p~~~p~~~~~l~~~C~~~~p  159 (189)
                      ++|.    ....++. + |||||            |.+... ..+...+..+.....   +..++.++.+|+.+||+.||
T Consensus       184 aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  263 (322)
T 2ycf_A          184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP  263 (322)
T ss_dssp             CHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             CchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCH
Confidence            1111    1456888 9 99999            433322 234455555543332   25789999999999999999


Q ss_pred             CCCCCHHHHHH
Q psy1684         160 VKRPTFETLQW  170 (189)
Q Consensus       160 ~~RP~~~~i~~  170 (189)
                      ++|||+.++++
T Consensus       264 ~~Rps~~~~l~  274 (322)
T 2ycf_A          264 KARFTTEEALR  274 (322)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hhCCCHHHHhh
Confidence            99999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.39  E-value=1.3e-14  Score=110.81  Aligned_cols=136  Identities=7%  Similarity=-0.061  Sum_probs=90.6

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++........|||+|++.+ |++    ..                 ++.....++......+..+++.|+.+
T Consensus        68 ~hp~iv~l~~~~~~~~~~~lv~e~~~g-g~L----~~-----------------~l~~~~~l~~~~~~~~~~qi~~aL~~  125 (345)
T 3a8x_A           68 NHPFLVGLHSCFQTESRLFFVIEYVNG-GDL----MF-----------------HMQRQRKLPEEHARFYSAEISLALNY  125 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCS-CBH----HH-----------------HHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCeEEEEEEeCCEEEEEEeCCCC-CcH----HH-----------------HHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            456666655555444555666666554 211    11                 23323345566667777888899999


Q ss_pred             eccCCcccccc-cc---------------cccccC----------------------CCCCccc-e-EEEec--------
Q psy1684          87 NLRKPCVQVSC-RI---------------YLVHGT----------------------NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~l~~~~----------------------~~~~~~~-s-VwsfG--------  118 (189)
                      +|..+++|||+ |+               |+++..                      ....|+. + |||+|        
T Consensus       126 LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  205 (345)
T 3a8x_A          126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  205 (345)
T ss_dssp             HHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHh
Confidence            99999999996 55               333321                      3456888 9 99999        


Q ss_pred             ----CCCC---------ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         119 ----SGGM---------TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       119 ----~~~~---------~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                          |.+.         ....+...+..+ .+..|..++.++.+|+.+||+.||++||++
T Consensus       206 g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          206 GRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             SSCTTTTTTC-------CHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCcCCcccccccccccHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                4321         223344445444 456788999999999999999999999995

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.39  E-value=2.6e-13  Score=100.84  Aligned_cols=118  Identities=10%  Similarity=0.108  Sum_probs=84.4

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cccccc----cC-----------------------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVH----GT-----------------------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~----~~-----------------------------------  105 (189)
                      ..++..++..+..+.+.|+.++|..+++|+|+ |+.+.-    +.                                   
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~  179 (296)
T 4hgt_A          100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA  179 (296)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCc
Confidence            34567778888889999999999999999996 552111    00                                   


Q ss_pred             --------CCCCccc-e-EEEec------------CCCCCh---HHHHHHHHcC-CCCC---CCCCCCHHHHHHHHHhcc
Q psy1684         106 --------NLSGVVV-S-AVDFG------------SGGMTN---AEVLHQVEHG-YRMP---CPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       106 --------~~~~~~~-s-VwsfG------------~~~~~~---~~~~~~v~~g-~~~~---~p~~~p~~~~~l~~~C~~  156 (189)
                              ....++. + |||||            |.+.+.   .+.+..+..+ ...+   .+..+|+++.+|+.+||+
T Consensus       180 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  259 (296)
T 4hgt_A          180 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRS  259 (296)
T ss_dssp             GGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHT
T ss_pred             cccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHh
Confidence                    3345788 9 99999            444322   1222222211 1111   226789999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         157 KDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      .||++|||+++|++.|+.+++..+..+
T Consensus       260 ~~p~~Rpt~~~l~~~l~~~~~~~~~~~  286 (296)
T 4hgt_A          260 LRFDDKPDYSYLRQLFRNLFHRQGFSY  286 (296)
T ss_dssp             SCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence            999999999999999999999766544

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.39  E-value=3.8e-15  Score=112.00  Aligned_cols=142  Identities=11%  Similarity=0.029  Sum_probs=90.9

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|++++++.....+..|||+|++.++.     +..                 ++.....++..++..+..+.+.|+.+
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-----L~~-----------------~l~~~~~~~~~~~~~i~~qi~~~l~~  126 (316)
T 2ac3_A           69 GHRNVLELIEFFEEEDRFYLVFEKMRGGS-----ILS-----------------HIHKRRHFNELEASVVVQDVASALDF  126 (316)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCB-----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEEcCCCCc-----HHH-----------------HHhccCCCCHHHHHHHHHHHHHHHHH
Confidence            45555555554444444555555555411     111                 33333345566666777888899999


Q ss_pred             eccCCcccccc-cccc------------------ccc----------------------------CC------CCCccc-
Q psy1684          87 NLRKPCVQVSC-RIYL------------------VHG----------------------------TN------LSGVVV-  112 (189)
Q Consensus        87 ~~~~~~~~~~~-p~~l------------------~~~----------------------------~~------~~~~~~-  112 (189)
                      +|..+++|+|+ |+.+                  +..                            ..      ...++. 
T Consensus       127 lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  206 (316)
T 2ac3_A          127 LHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR  206 (316)
T ss_dssp             HHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTT
T ss_pred             HHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcc
Confidence            99999999996 5511                  110                            00      033678 


Q ss_pred             e-EEEec------------CCCCC---------------hHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHhcccCCC
Q psy1684         113 S-AVDFG------------SGGMT---------------NAEVLHQVEHGYRMPCP----PGCPPRLYDIMLECWLKDPV  160 (189)
Q Consensus       113 s-VwsfG------------~~~~~---------------~~~~~~~v~~g~~~~~p----~~~p~~~~~l~~~C~~~~p~  160 (189)
                      + |||+|            |.+.+               ...+...+..+.. ..|    ..+|+++.+|+.+||+.||+
T Consensus       207 ~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~  285 (316)
T 2ac3_A          207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-EFPDKDWAHISCAAKDLISKLLVRDAK  285 (316)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-CCCHHHHTTSCHHHHHHHHHHSCSSTT
T ss_pred             cccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc-ccCchhcccCCHHHHHHHHHHhhCChh
Confidence            8 99999            43332               2345556655532 233    46899999999999999999


Q ss_pred             CCCCHHHHHHH
Q psy1684         161 KRPTFETLQWK  171 (189)
Q Consensus       161 ~RP~~~~i~~~  171 (189)
                      +|||+.++++.
T Consensus       286 ~Rps~~e~l~h  296 (316)
T 2ac3_A          286 QRLSAAQVLQH  296 (316)
T ss_dssp             TSCCHHHHHHS
T ss_pred             hCCCHHHHhcC
Confidence            99999999873

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.38  E-value=5.8e-15  Score=114.84  Aligned_cols=105  Identities=10%  Similarity=0.056  Sum_probs=75.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-ccc------------------c--------------------cccC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIY------------------L--------------------VHGT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~------------------l--------------------~~~~-~  106 (189)
                      .+....+..+..+++.|+.++|..+++|+|+ |+.                  +                    ++|. .
T Consensus       157 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  236 (400)
T 1nxk_A          157 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG  236 (400)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcC
Confidence            3556777788889999999999999999996 541                  1                    1111 3


Q ss_pred             CCCccc-e-EEEec------------CCCCChH----HHHHHHHcC-CCCCCC--CCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNA----EVLHQVEHG-YRMPCP--PGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~----~~~~~v~~g-~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      ...|+. + |||||            |.+.+..    .+...+..+ ...+.|  ..++.++.+||.+||+.||++|||+
T Consensus       237 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~  316 (400)
T 1nxk_A          237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  316 (400)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCH
Confidence            456899 9 99999            4333211    234445444 233332  4689999999999999999999999


Q ss_pred             HHHHHH
Q psy1684         166 ETLQWK  171 (189)
Q Consensus       166 ~~i~~~  171 (189)
                      .+|++.
T Consensus       317 ~eil~h  322 (400)
T 1nxk_A          317 TEFMNH  322 (400)
T ss_dssp             HHHHHS
T ss_pred             HHHhcC
Confidence            999874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.38  E-value=5.9e-15  Score=110.94  Aligned_cols=104  Identities=18%  Similarity=0.135  Sum_probs=74.8

Q ss_pred             CcCHhHHHHHhhhccCCceeeccC-Ccccccc-cc---------------ccc--------------------ccC----
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRK-PCVQVSC-RI---------------YLV--------------------HGT----  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~-~~~~~~~-p~---------------~l~--------------------~~~----  105 (189)
                      .++...+..+..+.+.|+.++|.. +++|+|+ |+               +++                    +|.    
T Consensus       120 ~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (318)
T 2dyl_A          120 PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPP  199 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccc
Confidence            344566677778888999999985 8999986 54               111                    111    


Q ss_pred             --CCCCccc-e-EEEec------------CCC-CChHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         106 --NLSGVVV-S-AVDFG------------SGG-MTNAEVLHQVEHGYRMPCP--PGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       106 --~~~~~~~-s-VwsfG------------~~~-~~~~~~~~~v~~g~~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                        ....++. + |||||            |.+ .+..+++..+..+..+..|  ..+|+++.+|+.+||+.||.+|||+.
T Consensus       200 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  279 (318)
T 2dyl_A          200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN  279 (318)
T ss_dssp             ------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             cccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHH
Confidence              1345788 9 99999            444 2345666666666554444  46899999999999999999999999


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +|++
T Consensus       280 ~ll~  283 (318)
T 2dyl_A          280 KLLE  283 (318)
T ss_dssp             HHTT
T ss_pred             HHhh
Confidence            9986

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.38  E-value=1.4e-14  Score=111.66  Aligned_cols=95  Identities=6%  Similarity=-0.193  Sum_probs=66.7

Q ss_pred             hHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC------------------CCC--------
Q psy1684          71 PELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------NLS--------  108 (189)
Q Consensus        71 ~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------~~~--------  108 (189)
                      ..+..+..+++.|+.++|..+++|+|+ |+               |++...                  ...        
T Consensus       206 ~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~  285 (377)
T 3byv_A          206 HARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRD  285 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhccccccccccc
Confidence            445567889999999999999999996 55               332211                  112        


Q ss_pred             ---Cccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 ---GVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ---~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                         .|+. + |||||            |.+.+..+....+.     ..+..+|+++.+||.+||+.||++|||+.++++
T Consensus       286 ~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          286 RRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF-----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             CEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG-----SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             ccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh-----hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence               6888 9 99999            33322222222221     224678999999999999999999999999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.38  E-value=5.4e-15  Score=114.27  Aligned_cols=106  Identities=11%  Similarity=-0.043  Sum_probs=76.9

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccc--------------------cC-C
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVH--------------------GT-N  106 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~--------------------~~-~  106 (189)
                      +..++...+..+..+.+.|+.++|..+++|+|+ |+                |++.                    |. .
T Consensus       135 ~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~  214 (383)
T 3eb0_A          135 GRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELML  214 (383)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhc
Confidence            345556667777888899999999999999996 55                2221                    11 2


Q ss_pred             C-CCccc-e-EEEec------------CCCCChHHHHHHHHc--CCC--------------------------CCCCCCC
Q psy1684         107 L-SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR--------------------------MPCPPGC  143 (189)
Q Consensus       107 ~-~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~--------------------------~~~p~~~  143 (189)
                      . ..++. + |||+|            |.+.+..+.+..+.+  |..                          ...|..+
T Consensus       215 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (383)
T 3eb0_A          215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT  294 (383)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTC
T ss_pred             CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCC
Confidence            2 34888 9 99999            777666555544421  110                          0135678


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |+++.+|+.+||+.||++|||+.|+++
T Consensus       295 ~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          295 PSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            999999999999999999999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.38  E-value=3.2e-13  Score=100.41  Aligned_cols=118  Identities=10%  Similarity=0.111  Sum_probs=84.0

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cccccc----cC-----------------------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVH----GT-----------------------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~----~~-----------------------------------  105 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |+.+.-    ..                                   
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  179 (296)
T 3uzp_A          100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA  179 (296)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccccccc
Confidence            34557777788889999999999999999996 552111    00                                   


Q ss_pred             --------CCCCccc-e-EEEec------------CCCCC---hHHHHHHHHcC-CCCC---CCCCCCHHHHHHHHHhcc
Q psy1684         106 --------NLSGVVV-S-AVDFG------------SGGMT---NAEVLHQVEHG-YRMP---CPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       106 --------~~~~~~~-s-VwsfG------------~~~~~---~~~~~~~v~~g-~~~~---~p~~~p~~~~~l~~~C~~  156 (189)
                              ....++. + |||||            |.+.+   ..+.+..+..+ ...+   .+..+|+++.+|+.+||+
T Consensus       180 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  259 (296)
T 3uzp_A          180 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRS  259 (296)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHT
T ss_pred             ccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHh
Confidence                    2345788 9 99999            44432   12233333221 1111   236789999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         157 KDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      .||++|||+.+|++.|+.++.......
T Consensus       260 ~dp~~Rps~~~l~~~l~~~~~~~~~~~  286 (296)
T 3uzp_A          260 LRFDDKPDYSYLRQLFRNLFHRQGFSY  286 (296)
T ss_dssp             SCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred             cCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence            999999999999999999998765543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.37  E-value=5.8e-15  Score=114.62  Aligned_cols=152  Identities=14%  Similarity=0.076  Sum_probs=99.7

Q ss_pred             CCChHHHHHHhcCCCCCC--CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC---CcCHhHHHHHhhh
Q psy1684           5 KIKRIEAEKKLLLPENDH--GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT---TIHYPELVEHYSK   79 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~--g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~---~~~l~~li~~~~~   79 (189)
                      .++|+|++++++.+....  ..+||+|++.+ +    ++..                 ++....   .++...+..+..+
T Consensus        63 ~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~-----------------~l~~~~~~~~l~~~~~~~i~~q  120 (396)
T 4eut_A           63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPC-G----SLYT-----------------VLEEPSNAYGLPESEFLIVLRD  120 (396)
T ss_dssp             HCCCTTBCCEEEEEECTTTCCEEEEECCCTT-E----EHHH-----------------HTTSGGGTTCCCHHHHHHHHHH
T ss_pred             hcCCCCCCeEEEeeccCCCCeeEEEEecCCC-C----CHHH-----------------HHHhhhcccCCCHHHHHHHHHH
Confidence            356777777766543332  34677777665 2    1211                 232211   2557777888889


Q ss_pred             ccCCceeeccCCcccccc-cccc-------------------cccC---------------------C--------CCCc
Q psy1684          80 DADGLCVNLRKPCVQVSC-RIYL-------------------VHGT---------------------N--------LSGV  110 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~~l-------------------~~~~---------------------~--------~~~~  110 (189)
                      .+.|+.++|..+++|+|+ |+.+                   +...                     .        ...+
T Consensus       121 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  200 (396)
T 4eut_A          121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKY  200 (396)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHH
T ss_pred             HHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCC
Confidence            999999999999999996 5522                   1110                     0        1356


Q ss_pred             cc-e-EEEec------------CCC----CChHHHHHHHHcCCCC--------------------CCC----CCCCHHHH
Q psy1684         111 VV-S-AVDFG------------SGG----MTNAEVLHQVEHGYRM--------------------PCP----PGCPPRLY  148 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~----~~~~~~~~~v~~g~~~--------------------~~p----~~~p~~~~  148 (189)
                      +. + |||||            |.+    ....+++..+..+...                    +.+    ..++..+.
T Consensus       201 ~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~  280 (396)
T 4eut_A          201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT  280 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhch
Confidence            78 8 99999            322    2345666666555322                    111    22446788


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         149 DIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       149 ~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      +++.+||+.||++||++.++++.++.+++.
T Consensus       281 ~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          281 PVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             HHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            999999999999999999999999998874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.37  E-value=4.5e-15  Score=112.19  Aligned_cols=143  Identities=15%  Similarity=0.047  Sum_probs=87.5

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-----CCCCcCHhHHHHHhhh
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-----GRTTIHYPELVEHYSK   79 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-----~~~~~~l~~li~~~~~   79 (189)
                      .+.|+|++++++.+...+..+||+|++.. +     +..                 ++.     ....+....+..+..+
T Consensus        77 ~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~-----l~~-----------------~~~~~~~~~~~~~~~~~~~~i~~~  133 (327)
T 3aln_A           77 SSDCPYIVQFYGALFREGDCWICMELMST-S-----FDK-----------------FYKYVYSVLDDVIPEEILGKITLA  133 (327)
T ss_dssp             SCCCTTBCCEEEEEECSSEEEEEECCCSE-E-----HHH-----------------HHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred             cCCCCcEeeeeeEEEeCCceEEEEeecCC-C-----hHH-----------------HHHHHHhhhcccCcHHHHHHHHHH
Confidence            45677777777665555556677766653 1     111                 111     1233445556667778


Q ss_pred             ccCCceeeccC-Ccccccc-cc-----------------------------------cccccCC-----CCCccc-e-EE
Q psy1684          80 DADGLCVNLRK-PCVQVSC-RI-----------------------------------YLVHGTN-----LSGVVV-S-AV  115 (189)
Q Consensus        80 ~a~gl~~~~~~-~~~~~~~-p~-----------------------------------~l~~~~~-----~~~~~~-s-Vw  115 (189)
                      .+.|+.++|.. +++|+|+ |.                                   ++++|..     ...++. + ||
T Consensus       134 i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~  213 (327)
T 3aln_A          134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW  213 (327)
T ss_dssp             HHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------------------------------CCSHHHHH
T ss_pred             HHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHH
Confidence            88899999998 9999986 44                                   1222221     344788 9 99


Q ss_pred             Eec------------CCCCCh-HHHHHHHHcCCCCCCC----CCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         116 DFG------------SGGMTN-AEVLHQVEHGYRMPCP----PGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       116 sfG------------~~~~~~-~~~~~~v~~g~~~~~p----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |||            |.+.+. .+.+..+..+..+..+    ..+++++.+|+.+||+.||++|||+.+|++
T Consensus       214 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          214 SLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            999            444332 2222233344433333    468999999999999999999999999976

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.36  E-value=2.5e-15  Score=113.94  Aligned_cols=105  Identities=16%  Similarity=0.157  Sum_probs=74.1

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~  107 (189)
                      ..+....+..+..+.+.|+.++|..+++|+|+ |+               +++                     +|. ..
T Consensus       119 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  198 (331)
T 4aaa_A          119 NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG  198 (331)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccC
Confidence            34556777778888899999999999999996 55               221                     111 22


Q ss_pred             -CCccc-e-EEEec------------CCCCChHHHHHHHHc--------------------CCCCCC----------CCC
Q psy1684         108 -SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--------------------GYRMPC----------PPG  142 (189)
Q Consensus       108 -~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--------------------g~~~~~----------p~~  142 (189)
                       ..++. + |||+|            |.+.+..+.+..+..                    +.+.+.          .+.
T Consensus       199 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (331)
T 4aaa_A          199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPK  278 (331)
T ss_dssp             CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTT
T ss_pred             CCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccc
Confidence             35788 9 99999            666655544433311                    111111          136


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +++++.+|+.+||+.||++|||++|+++
T Consensus       279 ~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          279 LSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            7899999999999999999999999986

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.36  E-value=8.4e-15  Score=108.96  Aligned_cols=101  Identities=13%  Similarity=0.035  Sum_probs=71.6

Q ss_pred             HhHHHHHhhhccCCceeeccCCcccccc-cc----------------ccccc---------------------C-CC--C
Q psy1684          70 YPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVHG---------------------T-NL--S  108 (189)
Q Consensus        70 l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~~---------------------~-~~--~  108 (189)
                      ...+..+..+.+.|+.++|..+++|+|+ |.                +++..                     . ..  .
T Consensus       121 ~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  200 (295)
T 2clq_A          121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR  200 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCC
Confidence            4555566778888999999999999986 44                11110                     0 01  2


Q ss_pred             Cccc-e-EEEec------------CCCCC-hHHHH-HHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         109 GVVV-S-AVDFG------------SGGMT-NAEVL-HQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~-~~~~~-~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .++. + |||||            |.+.. ..... ........+..|..+|+++.+|+.+||+.||++|||+.++++
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            2778 8 99999            33322 22222 222345667788899999999999999999999999999975

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.36  E-value=1.1e-12  Score=106.68  Aligned_cols=90  Identities=30%  Similarity=0.410  Sum_probs=76.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCC---------eeeEEEEEeccCC-ccCCCCCcC-
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF---------CLKMTTGRSLFET-QKAGRTTIH-   69 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~---------~v~h~~i~~~~~g-yl~~~~~~~-   69 (189)
                      ||||.++|.+|+++|.... .+|+||||+|.+.+|.|+||++.  .+         .++|++|....++ ++.+...|. 
T Consensus       110 Wy~g~~~r~eAe~lL~~~~-~~G~FLVR~S~~~~g~y~LSv~~--~~~~~~~~~~~~v~H~~I~~~~~~~~~~~~~~F~s  186 (595)
T 3ps5_A          110 WYHGHMSGGQAETLLQAKG-EPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDS  186 (595)
T ss_dssp             TEEESCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--EEESSSTTSCEEEEEEEEBCGGGCBBSSSSCCBSS
T ss_pred             cccccCCHHHHHHHHhccC-CCceEEEEecCCCCCcEEEEEEE--CCccccccCCCceEEEEEEEeCCEEEEcCCcCCCC
Confidence            9999999999999985443 67999999999999999999999  66         8999999876555 787777899 


Q ss_pred             HhHHHHHhhhc----cCCceeeccCCcc
Q psy1684          70 YPELVEHYSKD----ADGLCVNLRKPCV   93 (189)
Q Consensus        70 l~~li~~~~~~----a~gl~~~~~~~~~   93 (189)
                      +.+||+||...    ..|+...+..|+.
T Consensus       187 l~~LV~~y~~~~l~~~~g~~~~L~~p~~  214 (595)
T 3ps5_A          187 LTDLVEHFKKTGIEEASGAFVYLRQPYY  214 (595)
T ss_dssp             HHHHHHHHHHSCBCCTTSCCBCCCEECC
T ss_pred             HHHHHHHHhcCCccccCCcEEEeecccc
Confidence            99999999873    5677777777764

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.4e-12  Score=84.96  Aligned_cols=70  Identities=20%  Similarity=0.183  Sum_probs=57.5

Q ss_pred             CCCcEEEecCCCCCCceEEEEEecCC--CeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhhhccCC--ceeeccCCcc
Q psy1684          21 DHGAFLIRDSESRKNDYSLSEYKRSS--FCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYSKDADG--LCVNLRKPCV   93 (189)
Q Consensus        21 ~~g~fLvre~~~~~~~~~ls~~~~~~--~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~~~a~g--l~~~~~~~~~   93 (189)
                      .+|+||||++. .+|.|+||++.  .  +.++||+|....++ |+.+...|. +.+||+||+..+..  ....+..|+-
T Consensus        43 ~dG~FLVR~S~-~~g~y~LSv~~--~~~~~vkH~rI~~~~~~~~i~~~~~F~sL~eLV~hY~~~~l~~~~~~~L~~P~~  118 (126)
T 2cr4_A           43 QDGLYCIRNSS-TKSGKVLVVWD--ETSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYG  118 (126)
T ss_dssp             CTTCEEEEECS-STTCEEEEEEE--TTTTEECCEECEEETTEEESSSSCEESSHHHHHHHHTTSCCSSSSSCCCCSBSS
T ss_pred             CCCeEEEEecC-CCCCEEEEEEe--CCCCCEEEEEEEECCCeEEEcCCccCCCHHHHHHHHhhCCcCCCCCEEeCCcCC
Confidence            35999999999 77999999999  8  89999999987777 888778899 99999999987653  2334445543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.36  E-value=2.9e-13  Score=107.66  Aligned_cols=118  Identities=10%  Similarity=0.093  Sum_probs=85.8

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cccccc------------------cC---------------------
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVH------------------GT---------------------  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~------------------~~---------------------  105 (189)
                      ..+....+..+..+++.|+.++|..+++|+|+ |+.+.-                  ..                     
T Consensus        98 ~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~  177 (483)
T 3sv0_A           98 RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA  177 (483)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCc
Confidence            34667778888889999999999999999996 552211                  00                     


Q ss_pred             --------CCCCccc-e-EEEec------------CCCCCh---HHHHHHHHc----CCCCCCCCCCCHHHHHHHHHhcc
Q psy1684         106 --------NLSGVVV-S-AVDFG------------SGGMTN---AEVLHQVEH----GYRMPCPPGCPPRLYDIMLECWL  156 (189)
Q Consensus       106 --------~~~~~~~-s-VwsfG------------~~~~~~---~~~~~~v~~----g~~~~~p~~~p~~~~~l~~~C~~  156 (189)
                              ....++. + |||||            |.+...   .+.+..+..    ......+..+|.++.+||..||+
T Consensus       178 ~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~  257 (483)
T 3sv0_A          178 RYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRS  257 (483)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHT
T ss_pred             cccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhc
Confidence                    3345788 9 99999            555432   333333321    11112336889999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         157 KDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       157 ~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      .||++||++.+|++.|+.++...+..+
T Consensus       258 ~dP~~RPs~~el~~~L~~l~~~~~~~~  284 (483)
T 3sv0_A          258 LRFDDKPDYSYLKRLFRDLFIREGFQF  284 (483)
T ss_dssp             CCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CChhhCcCHHHHHHHHHHHHHHcCCCc
Confidence            999999999999999999988655443

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.35  E-value=2.5e-14  Score=107.90  Aligned_cols=103  Identities=14%  Similarity=0.064  Sum_probs=75.5

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc--------------------cC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~  110 (189)
                      ++...+..+..+.+.|+.++|..+++|+|+ |+               +++.                    |. ....+
T Consensus       117 ~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  196 (326)
T 1blx_A          117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY  196 (326)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCC
Confidence            556677778888899999999999999996 54               2211                    11 34568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCC--------------------------CCCCCCCHHHHHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM--------------------------PCPPGCPPRLYDI  150 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~--------------------------~~p~~~p~~~~~l  150 (189)
                      +. + |||||            |.+.+..+.+..+......                          ..+..+|.++.+|
T Consensus       197 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  276 (326)
T 1blx_A          197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL  276 (326)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHH
Confidence            88 9 99999            6666665555554321100                          1235688999999


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q psy1684         151 MLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       151 ~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +.+||+.||++|||+.++++
T Consensus       277 i~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          277 LLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHcCCCcccCCCHHHHhc
Confidence            99999999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.35  E-value=1.7e-14  Score=108.82  Aligned_cols=104  Identities=13%  Similarity=0.056  Sum_probs=75.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc---------------------ccC-C--
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-N--  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~--  106 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |.               +++                     +|. .  
T Consensus       125 ~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  204 (326)
T 2x7f_A          125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD  204 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccc
Confidence            3445556677788889999999999999986 44               111                     111 1  


Q ss_pred             ---CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q psy1684         107 ---LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRM-PCPPGCPPRLYDIMLECWLKDPVKRPTFETL  168 (189)
Q Consensus       107 ---~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~-~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i  168 (189)
                         ...++. + |||||            |.+.+..+....+..+..+ ..+..+|.++.+|+.+||..||++|||+.++
T Consensus       205 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  284 (326)
T 2x7f_A          205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL  284 (326)
T ss_dssp             ------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHH
Confidence               355888 9 99999            6666666666666444333 3456789999999999999999999999999


Q ss_pred             HH
Q psy1684         169 QW  170 (189)
Q Consensus       169 ~~  170 (189)
                      ++
T Consensus       285 l~  286 (326)
T 2x7f_A          285 MK  286 (326)
T ss_dssp             HT
T ss_pred             hh
Confidence            87

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.34  E-value=2e-14  Score=113.80  Aligned_cols=104  Identities=13%  Similarity=0.078  Sum_probs=72.6

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccccc--------------------C-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHG--------------------T-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~--------------------~-~~~~~  110 (189)
                      +....+..+..+.+.|+.++|..+++|||+ |+               |+++.                    . ....|
T Consensus       161 l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  240 (464)
T 3ttj_A          161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  240 (464)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCC
Confidence            445566667788889999999999999996 55               22221                    1 44568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCC--------------------------CC--------
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCP--------------------------PG--------  142 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p--------------------------~~--------  142 (189)
                      +. + |||+|            |.+.+..+.+..+.+....+.|                          ..        
T Consensus       241 ~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (464)
T 3ttj_A          241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA  320 (464)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCC
T ss_pred             CHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccc
Confidence            99 9 99999            7777765555554321111100                          00        


Q ss_pred             -------CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 -------CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 -------~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                             .++++.+|+.+|+..||++|||++|+++.
T Consensus       321 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             SSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                   04578999999999999999999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.34  E-value=1.2e-14  Score=109.57  Aligned_cols=109  Identities=14%  Similarity=0.086  Sum_probs=76.3

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cccccc----cC-------------------------------------
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVH----GT-------------------------------------  105 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~----~~-------------------------------------  105 (189)
                      ++...+..+..+.+.|+.++|..+++|+|+ |+.+.-    +.                                     
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhh
Confidence            556777788888999999999999999996 552211    00                                     


Q ss_pred             -------CCCCccc-e-EEEec------------CCCC----ChHHHHHHHHcCCCC--------------------CCC
Q psy1684         106 -------NLSGVVV-S-AVDFG------------SGGM----TNAEVLHQVEHGYRM--------------------PCP  140 (189)
Q Consensus       106 -------~~~~~~~-s-VwsfG------------~~~~----~~~~~~~~v~~g~~~--------------------~~p  140 (189)
                             ....++. + |||||            |.+.    ...+++..+..+...                    +.+
T Consensus       189 ~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  268 (319)
T 4euu_A          189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVS  268 (319)
T ss_dssp             HHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTT
T ss_pred             hccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcc
Confidence                   0366888 9 99999            3322    234555555444321                    111


Q ss_pred             ----CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         141 ----PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       141 ----~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                          ..++..+.+|+.+||+.||++|||++|+++..++..
T Consensus       269 ~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          269 CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             cccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence                234457889999999999999999999999887543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.33  E-value=9.4e-15  Score=114.63  Aligned_cols=103  Identities=14%  Similarity=0.029  Sum_probs=74.2

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------cc------------------cccC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------YL------------------VHGT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------~l------------------~~~~-~~~~~  110 (189)
                      +....+..+..+++.|+.++|..+++|+|+ |+                 |+                  |+|. ....|
T Consensus       197 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~  276 (429)
T 3kvw_A          197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARY  276 (429)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCC
Confidence            556777778889999999999999999996 55                 11                  1111 34458


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCC--------------------------------------
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP--------------------------------------  138 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~--------------------------------------  138 (189)
                      +. + |||||            |.+.+..+.+..+.....++                                      
T Consensus       277 ~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (429)
T 3kvw_A          277 GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNG  356 (429)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECC
T ss_pred             CchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccc
Confidence            89 9 99999            66666655554442211000                                      


Q ss_pred             --------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         139 --------------------CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       139 --------------------~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                          .+...++++.+|+.+||+.||++|||++|+++
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          357 GRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             EECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                                11234788999999999999999999999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.33  E-value=6e-14  Score=108.00  Aligned_cols=104  Identities=14%  Similarity=-0.031  Sum_probs=75.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c------------------ccccC-CC-CCcc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y------------------LVHGT-NL-SGVV  111 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~------------------l~~~~-~~-~~~~  111 (189)
                      ++...+..+..+.+.|+.++|..+++|+|+ |+               |                  +|+|. .. ..++
T Consensus       141 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  220 (371)
T 4exu_A          141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN  220 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCC
Confidence            556667777888899999999999999996 55               1                  12221 22 5688


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHc--CCC----------------------C------CCCCCCCHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEH--GYR----------------------M------PCPPGCPPRL  147 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~----------------------~------~~p~~~p~~~  147 (189)
                      . + |||+|            |.+.+..+.+..+..  |..                      .      ..++.+++++
T Consensus       221 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (371)
T 4exu_A          221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQA  300 (371)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHH
T ss_pred             cHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHH
Confidence            8 9 99999            666665555544422  110                      0      0124678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         148 YDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       148 ~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+|+.+||+.||++|||++++++.
T Consensus       301 ~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          301 ADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHCCCChhhcCCHHHHhcC
Confidence            999999999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.32  E-value=3.2e-14  Score=108.91  Aligned_cols=143  Identities=16%  Similarity=0.015  Sum_probs=93.1

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a~   82 (189)
                      .+.|+|++++++.+...+..+||+|++ . +.    +..                 ++...  ..++..++..+..+.+.
T Consensus        92 ~~~h~~iv~~~~~~~~~~~~~lv~e~~-~-~~----L~~-----------------~~~~~~~~~~~~~~~~~i~~qi~~  148 (360)
T 3llt_A           92 DINNNNIVKYHGKFMYYDHMCLIFEPL-G-PS----LYE-----------------IITRNNYNGFHIEDIKLYCIEILK  148 (360)
T ss_dssp             STTGGGBCCEEEEEEETTEEEEEECCC-C-CB----HHH-----------------HHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             CCCCCCeecccceeeECCeeEEEEcCC-C-CC----HHH-----------------HHHhcCCCCCCHHHHHHHHHHHHH
Confidence            345777777776655555566777766 2 21    111                 22211  23556777778888999


Q ss_pred             CceeeccCCcccccc-cccccc---------------------------cC-----------------------------
Q psy1684          83 GLCVNLRKPCVQVSC-RIYLVH---------------------------GT-----------------------------  105 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~~l~~---------------------------~~-----------------------------  105 (189)
                      |+.++|..+++|+|+ |+.+.-                           ..                             
T Consensus       149 aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aP  228 (360)
T 3llt_A          149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAP  228 (360)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCH
T ss_pred             HHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCc
Confidence            999999999999996 552211                           11                             


Q ss_pred             ---CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC-------------------------CCC--
Q psy1684         106 ---NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP-------------------------CPP--  141 (189)
Q Consensus       106 ---~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~-------------------------~p~--  141 (189)
                         ....++. + |||+|            |.+.+..+.+..+.....+.                         .|.  
T Consensus       229 E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  308 (360)
T 3llt_A          229 EVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENA  308 (360)
T ss_dssp             HHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTC
T ss_pred             HHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccc
Confidence               4556889 9 99999            66666656555543321111                         111  


Q ss_pred             ------------------CCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         142 ------------------GCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       142 ------------------~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                        ..++++.+|+.+||+.||++|||++|+++
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          309 SSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             SCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                              12367889999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=3.4e-14  Score=108.79  Aligned_cols=105  Identities=15%  Similarity=0.041  Sum_probs=75.0

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccccc----------------------C-C
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHG----------------------T-N  106 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~----------------------~-~  106 (189)
                      ..+....+..+..+++.|+.++|..+++|+|+ |+               |++..                      . .
T Consensus       154 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          154 ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR  233 (355)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhc
Confidence            34556667777788899999999999999996 55               22221                      1 1


Q ss_pred             --CCCccc-e-EEEec------------CCC----CChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---
Q psy1684         107 --LSGVVV-S-AVDFG------------SGG----MTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP---  163 (189)
Q Consensus       107 --~~~~~~-s-VwsfG------------~~~----~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP---  163 (189)
                        ...++. + |||||            |..    ....++...+..+ .++.|..++..+.+|+.+||..||++||   
T Consensus       234 ~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~  312 (355)
T 1vzo_A          234 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCG  312 (355)
T ss_dssp             TCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSS
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc-CCCCCcccCHHHHHHHHHHhhhCHHHhcCCC
Confidence              234778 9 99999            322    1234455444443 4567888999999999999999999999   


Q ss_pred             --CHHHHHHH
Q psy1684         164 --TFETLQWK  171 (189)
Q Consensus       164 --~~~~i~~~  171 (189)
                        +++++++.
T Consensus       313 ~~s~~ell~h  322 (355)
T 1vzo_A          313 PRDADEIKEH  322 (355)
T ss_dssp             TTTHHHHHTS
T ss_pred             CCCHHHHHcC
Confidence              88988764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.31  E-value=5e-13  Score=102.08  Aligned_cols=104  Identities=16%  Similarity=0.001  Sum_probs=74.7

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------cccC-CC-CCcc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NL-SGVV  111 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~-~~~~  111 (189)
                      ++...+..+..+.+.|+.++|..+++|+|+ |+               |+                  ++|. .. ..++
T Consensus       123 ~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  202 (353)
T 3coi_A          123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN  202 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCC
Confidence            556777778888899999999999999996 55               11                  1111 22 4688


Q ss_pred             c-e-EEEec------------CCCCChHHHHHHHHc--C-------------------------CC---CCCCCCCCHHH
Q psy1684         112 V-S-AVDFG------------SGGMTNAEVLHQVEH--G-------------------------YR---MPCPPGCPPRL  147 (189)
Q Consensus       112 ~-s-VwsfG------------~~~~~~~~~~~~v~~--g-------------------------~~---~~~p~~~p~~~  147 (189)
                      . + |||+|            |.+.+..+.+..+.+  |                         .+   ...++.+++++
T Consensus       203 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (353)
T 3coi_A          203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQA  282 (353)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHH
Confidence            8 9 99999            666555544444321  1                         01   11234688999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         148 YDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       148 ~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+|+.+||+.||++|||++++++.
T Consensus       283 ~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          283 ADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHcCCCcccCCCHHHHhcC
Confidence            999999999999999999999863

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.30  E-value=4.9e-14  Score=108.50  Aligned_cols=104  Identities=13%  Similarity=0.061  Sum_probs=73.9

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc--------------------ccC-CCCCc
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV--------------------HGT-NLSGV  110 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~--------------------~~~-~~~~~  110 (189)
                      +....+..+..+.+.|+.++|..+++|+|+ |+               |++                    +|. ....|
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  203 (371)
T 2xrw_A          124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  203 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCC
Confidence            445666677788889999999999999996 55               222                    111 34568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCC-----------------------------------C
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCP-----------------------------------P  141 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p-----------------------------------~  141 (189)
                      +. + |||+|            |.+.+..+.+..+.+....+.|                                   .
T Consensus       204 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (371)
T 2xrw_A          204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA  283 (371)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCC
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcc
Confidence            89 9 99999            7777766666665443222211                                   0


Q ss_pred             ------CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 ------GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ------~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            ..+.++.+|+.+||..||++|||++++++.
T Consensus       284 ~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          284 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             SSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                  014678999999999999999999999874

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.30  E-value=1.2e-11  Score=99.33  Aligned_cols=91  Identities=31%  Similarity=0.477  Sum_probs=76.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCC----------eeeEEEEEeccCC-ccCCCCCcC
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF----------CLKMTTGRSLFET-QKAGRTTIH   69 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~----------~v~h~~i~~~~~g-yl~~~~~~~   69 (189)
                      ||||.+++.+|+++|.... .+|+||||+|.+.+|.|+||++.  .+          .++|++|....++ ++.....|.
T Consensus       112 w~~g~~~r~~Ae~lL~~~~-~~G~FLVR~S~~~~g~y~LSv~~--~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~~~~F~  188 (525)
T 2shp_A          112 WFHGHLSGKEAEKLLTEKG-KHGSFLVRESQSHPGDFVLSVRT--GDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFD  188 (525)
T ss_dssp             TBCCSCCHHHHHHHHHHTC-CTTEEEEEECSSSTTCEEEEEEE--CC-----CCCCCEEEEEEEEEETTEEESSSSCCBS
T ss_pred             eecccCCHHHHHHHHhccC-CCceEEEEecCCCCCCEEEEEEE--CCccccccccccceEEEEEEecCCeEEECCCceeC
Confidence            9999999999999996443 67999999999888999999999  66          8999999887555 677677888


Q ss_pred             -HhHHHHHhhhcc----CCceeeccCCccc
Q psy1684          70 -YPELVEHYSKDA----DGLCVNLRKPCVQ   94 (189)
Q Consensus        70 -l~~li~~~~~~a----~gl~~~~~~~~~~   94 (189)
                       +.+|++||....    .|+...+..|+..
T Consensus       189 sL~eLV~~y~~~~l~~~~g~~~~L~~P~~~  218 (525)
T 2shp_A          189 SLTDLVEHYKKNPMVETLGTVLQLKQPLNT  218 (525)
T ss_dssp             SHHHHHHHHHHSCCBCTTSCBCCCCEECCC
T ss_pred             cHHHHHHhhhccCccccCCeEEEeeccccc
Confidence             999999998875    4666667766544

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.28  E-value=1.4e-13  Score=110.82  Aligned_cols=137  Identities=15%  Similarity=0.030  Sum_probs=92.9

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC----CCCcCHhHHHHHhhhcc
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG----RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~----~~~~~l~~li~~~~~~a   81 (189)
                      +.|+|+++++.........|||+|++.+ |++    ..                 ++..    ...+.......+..+++
T Consensus       242 l~hp~Iv~l~~~~~~~~~l~lVmE~~~g-g~L----~~-----------------~l~~~~~~~~~l~e~~~~~~~~qi~  299 (543)
T 3c4z_A          242 VHSRFIVSLAYAFETKTDLCLVMTIMNG-GDI----RY-----------------HIYNVDEDNPGFQEPRAIFYTAQIV  299 (543)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTT-CBH----HH-----------------HHHTSSTTSCSCCHHHHHHHHHHHH
T ss_pred             cCCCCEeeEEEEEeeCCEEEEEEEeccC-CCH----HH-----------------HHHHhhcccccccHHHHHHHHHHHH
Confidence            4566666655554444556666666655 211    11                 1211    22355666677788889


Q ss_pred             CCceeeccCCcccccc-cc---------------ccccc---------------------C-CCCCccc-e-EEEec---
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHG---------------------T-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~---------------------~-~~~~~~~-s-VwsfG---  118 (189)
                      .|+.++|..+++|||+ |+               |++..                     . ....|+. + |||+|   
T Consensus       300 ~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvil  379 (543)
T 3c4z_A          300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL  379 (543)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHH
Confidence            9999999999999996 55               22221                     1 3456899 9 99999   


Q ss_pred             ---------CCCC----ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         119 ---------SGGM----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       119 ---------~~~~----~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                               |.+.    ...++...+..+ ....|..+++++.+|+.+||+.||++||++
T Consensus       380 yelltG~~PF~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          380 YEMIAARGPFRARGEKVENKELKQRVLEQ-AVTYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHSSCSSCCTTCCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             HHHHhCCCCCCCCccchhHHHHHHHHhhc-ccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence                     4443    345666666554 355678999999999999999999999976

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.28  E-value=1.4e-13  Score=103.32  Aligned_cols=105  Identities=12%  Similarity=-0.002  Sum_probs=75.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccccC------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVHGT------------------------  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~~~------------------------  105 (189)
                      .+....+..+..+.+.|+.++|..+++|+|+ |+                +++...                        
T Consensus       116 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (320)
T 2i6l_A          116 PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL  195 (320)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHH
Confidence            4556666777888899999999999999996 55                211110                        


Q ss_pred             --CCCCccc-e-EEEec------------CCCCChHHHHHHHHcCCC------------------------CC-----CC
Q psy1684         106 --NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR------------------------MP-----CP  140 (189)
Q Consensus       106 --~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~------------------------~~-----~p  140 (189)
                        ....++. + |||||            |.+.+..+.+..+..+..                        +.     .+
T Consensus       196 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (320)
T 2i6l_A          196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLL  275 (320)
T ss_dssp             HHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHS
T ss_pred             hcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhc
Confidence              2256888 9 99999            666665555544432211                        11     12


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+|.++.+|+.+||+.||++|||++++++.
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          276 PGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             chhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            4689999999999999999999999999863

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.28  E-value=8.8e-14  Score=112.42  Aligned_cols=142  Identities=13%  Similarity=-0.030  Sum_probs=96.6

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccCC
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~g   83 (189)
                      ++|+|++++++.....+..|||+|++.+ |++    ..                 ++..  ...+.......+..+++.|
T Consensus       241 l~hp~Iv~l~~~~~~~~~l~lVmEy~~g-g~L----~~-----------------~l~~~~~~~l~e~~~~~i~~qIl~a  298 (576)
T 2acx_A          241 VNSRFVVSLAYAYETKDALCLVLTLMNG-GDL----KF-----------------HIYHMGQAGFPEARAVFYAAEICCG  298 (576)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCS-CBH----HH-----------------HHHSSSSCCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCEeeEEEEEeeCCEEEEEEEcCCC-CcH----HH-----------------HHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            4566666666555555556667766655 211    11                 2221  1235566677778888999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc--------------------cC-CCCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH--------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~--------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|||+ |+               |++.                    |. ....|+. + |||+|      
T Consensus       299 L~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeL  378 (576)
T 2acx_A          299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM  378 (576)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence            99999999999996 55               2222                    11 3456889 9 99999      


Q ss_pred             ------CCCC----ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 ------SGGM----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 ------~~~~----~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                            |.+.    ...++...+... ....|..+++++.+|+.+||+.||++||     +++||++
T Consensus       379 ltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          379 IAGQSPFQQRKKKIKREEVERLVKEV-PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHSSCSSSCSSSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HhCCCCCcccccchhHHHHHHHhhcc-cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                  4443    234555555544 3556788999999999999999999999     6788875

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.28  E-value=9.3e-12  Score=100.07  Aligned_cols=91  Identities=30%  Similarity=0.404  Sum_probs=75.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCC---------eeeEEEEEeccCC-ccCCCCCcC-
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF---------CLKMTTGRSLFET-QKAGRTTIH-   69 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~---------~v~h~~i~~~~~g-yl~~~~~~~-   69 (189)
                      ||||.|++.+|+++|.... .+|+||||++.+.+|.|+||++.  .+         .++|++|....++ ++.....|. 
T Consensus       110 w~~g~i~r~~Ae~lL~~~~-~~G~FLVR~S~~~~g~y~Lsv~~--~~~~~~~~~~~~v~h~~I~~~~g~~~l~~~~~F~s  186 (532)
T 2b3o_A          110 WYHGHMSGGQAETLLQAKG-EPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDS  186 (532)
T ss_dssp             TBCTTCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--EEEC----CCEEEEEEEEBCCTTSBBSSSSCCBSS
T ss_pred             ccccccchHHHHHHHhcCC-CCceEEEecCCCCCCceEEEEEe--cCccccccCCCceEEEEEEEcCCceeeCCCcccCc
Confidence            9999999999999986433 56999999999888999999998  66         8999999887555 676677888 


Q ss_pred             HhHHHHHhhhc----cCCceeeccCCccc
Q psy1684          70 YPELVEHYSKD----ADGLCVNLRKPCVQ   94 (189)
Q Consensus        70 l~~li~~~~~~----a~gl~~~~~~~~~~   94 (189)
                      +.+|++||...    ..|+...+..|+..
T Consensus       187 l~eLV~~y~~~~l~~~~g~~~~L~~P~~~  215 (532)
T 2b3o_A          187 LTDLVEHFKKTGIEEASGAFVYLRQPYYA  215 (532)
T ss_dssp             HHHHHHHHHHHCEECSSSCEECCCEECCC
T ss_pred             HHHHHhhccccCccccCCeeEeccccccc
Confidence            99999999876    46777777766643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.28  E-value=3e-14  Score=108.29  Aligned_cols=104  Identities=12%  Similarity=0.023  Sum_probs=67.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cccc-------------------------------------cccC-CC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL-------------------------------------VHGT-NL  107 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l-------------------------------------~~~~-~~  107 (189)
                      .++..++..+..+.+.|+.++|..+++|+|+ |+.+                                     ++|. ..
T Consensus       124 ~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~  203 (336)
T 3fhr_A          124 AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP  203 (336)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCC
Confidence            4557777888889999999999999999996 5511                                     1111 24


Q ss_pred             CCccc-e-EEEec------------CCCCChHHH----HHHHHcC-CC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEV----LHQVEHG-YR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~----~~~v~~g-~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                      ..++. + |||||            |.+.+...+    ...+..+ ..  .+....+++++.+|+.+||+.||++|||+.
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  283 (336)
T 3fhr_A          204 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTIT  283 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHH
Confidence            45788 8 99999            333332222    2222222 11  222357899999999999999999999999


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      ++++
T Consensus       284 ell~  287 (336)
T 3fhr_A          284 QFMN  287 (336)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            9997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.27  E-value=3.8e-14  Score=110.02  Aligned_cols=106  Identities=12%  Similarity=0.002  Sum_probs=75.3

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccc--------------------cC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVH--------------------GT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~--------------------~~-~~  107 (189)
                      ..++...+..+..+.+.|+.++|..+++|+|+ |+                |+++                    |. ..
T Consensus       136 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~  215 (394)
T 4e7w_A          136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFG  215 (394)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcC
Confidence            34555666677788899999999999999996 55                2221                    11 22


Q ss_pred             -CCccc-e-EEEec------------CCCCChHHHHHHHHc--CC----------------CC----------CCCCCCC
Q psy1684         108 -SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GY----------------RM----------PCPPGCP  144 (189)
Q Consensus       108 -~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~----------------~~----------~~p~~~p  144 (189)
                       ..|+. + |||+|            |.+.+..+.+..+.+  |.                ..          ..+..++
T Consensus       216 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (394)
T 4e7w_A          216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTP  295 (394)
T ss_dssp             CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCC
Confidence             34888 9 99999            777665554444322  10                00          0234588


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +++.+|+.+||+.||++|||+.++++.
T Consensus       296 ~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          296 PDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            999999999999999999999999863

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.27  E-value=9.9e-14  Score=104.12  Aligned_cols=105  Identities=10%  Similarity=0.167  Sum_probs=72.1

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-ccccccc---C-------------------------------
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVHG---T-------------------------------  105 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~~---~-------------------------------  105 (189)
                      ++.....+....+..+..+.+.|+.++|..+++|+|+ |+.+.-.   .                               
T Consensus       129 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE  208 (312)
T 2iwi_A          129 YITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPE  208 (312)
T ss_dssp             HHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHH
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCce
Confidence            3333334556667778888899999999999999996 5411111   0                               


Q ss_pred             --CCCCc-cc-e-EEEec------CCCC----ChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         106 --NLSGV-VV-S-AVDFG------SGGM----TNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       106 --~~~~~-~~-s-VwsfG------~~~~----~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                        ....+ +. + |||+|      +.+.    ...++    ..+ ....|..++.++.+|+.+||+.||++|||+.++++
T Consensus       209 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI----LEA-ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----HHT-CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             eeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH----hhh-ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              12233 55 8 99999      1111    12222    222 34567889999999999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.27  E-value=6.6e-14  Score=104.30  Aligned_cols=103  Identities=15%  Similarity=0.058  Sum_probs=72.4

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccccc---------------------------
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHG---------------------------  104 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~---------------------------  104 (189)
                      +...++..+..+.+.|+.++|..+++|+|+ |+               +++..                           
T Consensus       113 ~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (303)
T 1zy4_A          113 QQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG  192 (303)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------------------------
T ss_pred             cchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCC
Confidence            335666777788899999999999999986 54               22211                           


Q ss_pred             --------C-C-CCCccc-e-EEEec-------CC---CCChHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHhcccCC
Q psy1684         105 --------T-N-LSGVVV-S-AVDFG-------SG---GMTNAEVLHQVEHGY---RMPCPPGCPPRLYDIMLECWLKDP  159 (189)
Q Consensus       105 --------~-~-~~~~~~-s-VwsfG-------~~---~~~~~~~~~~v~~g~---~~~~p~~~p~~~~~l~~~C~~~~p  159 (189)
                              . . .+.++. + |||||       .+   +.+..++...+..+.   ....+..+|..+.+|+.+||+.||
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  272 (303)
T 1zy4_A          193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDP  272 (303)
T ss_dssp             -CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSG
T ss_pred             cccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCc
Confidence                    0 1 235888 9 99999       21   222344555554432   222445678889999999999999


Q ss_pred             CCCCCHHHHHH
Q psy1684         160 VKRPTFETLQW  170 (189)
Q Consensus       160 ~~RP~~~~i~~  170 (189)
                      ++|||+.++++
T Consensus       273 ~~Rps~~~ll~  283 (303)
T 1zy4_A          273 NKRPGARTLLN  283 (303)
T ss_dssp             GGSCCHHHHHH
T ss_pred             ccCcCHHHHhC
Confidence            99999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.27  E-value=2.2e-13  Score=104.30  Aligned_cols=105  Identities=17%  Similarity=0.093  Sum_probs=75.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc--------------------cccC-CC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL--------------------VHGT-NL-S  108 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l--------------------~~~~-~~-~  108 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               ++                    ++|. .. .
T Consensus       130 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  209 (362)
T 3pg1_A          130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFK  209 (362)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCC
Confidence            4556777788889999999999999999996 55               22                    2221 22 5


Q ss_pred             Cccc-e-EEEec------------CCCCChHHHHHHHHc--CC----------------------C-C------CCCCCC
Q psy1684         109 GVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GY----------------------R-M------PCPPGC  143 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~----------------------~-~------~~p~~~  143 (189)
                      .++. + |||+|            |.+.+..+.+..+..  |.                      . .      ..++.+
T Consensus       210 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (362)
T 3pg1_A          210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA  289 (362)
T ss_dssp             TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTS
T ss_pred             CCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCC
Confidence            6888 9 99999            666555555444421  10                      0 0      012467


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ++++.+|+.+||+.||++|||+.++++.
T Consensus       290 ~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          290 DPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            8899999999999999999999999863

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.26  E-value=2.6e-13  Score=104.33  Aligned_cols=105  Identities=11%  Similarity=0.012  Sum_probs=74.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc------------------ccC--CCCCc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV------------------HGT--NLSGV  110 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~------------------~~~--~~~~~  110 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               |++                  +|.  ....+
T Consensus       124 ~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  203 (367)
T 1cm8_A          124 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY  203 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCC
Confidence            3445556667778889999999999999996 55               222                  221  22568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHc--CCC----------------------------CCCCCCCCHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR----------------------------MPCPPGCPPR  146 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~----------------------------~~~p~~~p~~  146 (189)
                      +. + |||+|            |.+.+..+.+..+.+  |..                            ...++.++++
T Consensus       204 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (367)
T 1cm8_A          204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL  283 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHH
T ss_pred             ChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence            88 9 99999            666665554444321  110                            0123467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         147 LYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       147 ~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+|+.+|+..||++|||+.++++.
T Consensus       284 ~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          284 AVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHccCChhHCCCHHHHhcC
Confidence            9999999999999999999999873

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.26  E-value=1.7e-11  Score=96.95  Aligned_cols=68  Identities=21%  Similarity=0.226  Sum_probs=59.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVE   75 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~   75 (189)
                      ||||.|+|.+|+++|.   ..+|+||||+|.+.+|.|+||++.  .+.++||+|.. +++ |+. ...|. +.+|++
T Consensus        53 w~hg~i~r~~ae~lL~---~~~G~FLvR~S~~~~g~~~Lsv~~--~~~v~H~~I~~-~g~~~~~-~~~F~sl~~Lv~  122 (463)
T 3cxl_A           53 EFHGMISREAADQLLI---VAEGSYLIRESQRQPGTYTLALRF--GSQTRNFRLYY-DGKHFVG-EKRFESIHDLVT  122 (463)
T ss_dssp             TBCCSCCHHHHHHHHT---TSTTEEEEEECSSSTTCEEEEEEC--SSSEEEEECEE-SSSEESS-SCCBSCHHHHHH
T ss_pred             ccccCCCHHHHHHHHc---CCCCeEEEeccCCCCCCEEEEEEE--CCEEEEEEEec-CCeEEEC-CCccCCHHHHHH
Confidence            6799999999999994   257999999999998999999999  99999999987 333 554 57888 999998

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.26  E-value=1.3e-13  Score=107.54  Aligned_cols=143  Identities=6%  Similarity=-0.094  Sum_probs=98.9

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      +.|+|++++++.+......|||+|++++ |+    +..                 ++. ...+.......+..+++.|+.
T Consensus       126 l~hp~Iv~l~~~~~~~~~~~lV~E~~~g-g~----L~~-----------------~l~-~~~~~e~~~~~~~~qi~~aL~  182 (410)
T 3v8s_A          126 ANSPWVVQLFYAFQDDRYLYMVMEYMPG-GD----LVN-----------------LMS-NYDVPEKWARFYTAEVVLALD  182 (410)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTT-EE----HHH-----------------HHH-HCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEeCCCC-Cc----HHH-----------------HHH-cCCCCHHHHHHHHHHHHHHHH
Confidence            5677777777666655666777777765 31    111                 222 123445555666778888999


Q ss_pred             eeccCCcccccc-cc---------------ccccc----------------------C-CC----CCccc-e-EEEec--
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHG----------------------T-NL----SGVVV-S-AVDFG--  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~----------------------~-~~----~~~~~-s-VwsfG--  118 (189)
                      ++|..+++|||+ |+               |+++.                      . ..    ..|+. + |||||  
T Consensus       183 ~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi  262 (410)
T 3v8s_A          183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  262 (410)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred             HHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence            999999999996 55               33221                      1 11    12788 9 99999  


Q ss_pred             ----------CCCCChHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVK--RPTFETLQWK  171 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g---~~~~~p~~~p~~~~~l~~~C~~~~p~~--RP~~~~i~~~  171 (189)
                                |.+.+..++...+..+   ...|.+..+++++.+|+.+|+..+|.+  ||+++||++.
T Consensus       263 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          263 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             HHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence                      6677777777777543   234444579999999999999988888  9999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.26  E-value=4.7e-13  Score=102.98  Aligned_cols=105  Identities=13%  Similarity=-0.022  Sum_probs=74.4

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------cccC-CC-CCc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NL-SGV  110 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~-~~~  110 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               |+                  |+|. .. ..+
T Consensus       128 ~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  207 (367)
T 2fst_X          128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHY  207 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCC
Confidence            3556666777788899999999999999996 55               22                  2221 22 568


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHc--CCC-----------------------CC-----CCCCCCHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR-----------------------MP-----CPPGCPPR  146 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~-----------------------~~-----~p~~~p~~  146 (189)
                      +. + |||+|            |++.+..+.+..+.+  |..                       +.     ....++++
T Consensus       208 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (367)
T 2fst_X          208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL  287 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHH
Confidence            88 9 99999            777666554444422  110                       00     01357889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         147 LYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       147 ~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+|+.+||..||++|||+.++++.
T Consensus       288 ~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          288 AVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHhCCCCcccCcCHHHHhcC
Confidence            9999999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.25  E-value=7.1e-14  Score=108.14  Aligned_cols=30  Identities=17%  Similarity=0.192  Sum_probs=28.2

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 ~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .+++++.+|+.+||..||++|||++|+++.
T Consensus       300 ~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          300 DCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence            788999999999999999999999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.25  E-value=2.6e-13  Score=103.42  Aligned_cols=104  Identities=14%  Similarity=0.052  Sum_probs=73.0

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------ccc----------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV----------------------------  102 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~----------------------------  102 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               |++                            
T Consensus       108 ~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~  187 (353)
T 2b9h_A          108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW  187 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhcccccc
Confidence            3456667777888889999999999999986 44               222                            


Q ss_pred             ---ccC--CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCC-----------------------CC
Q psy1684         103 ---HGT--NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR-----------------------MP  138 (189)
Q Consensus       103 ---~~~--~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~-----------------------~~  138 (189)
                         +|.  ....++. + |||||            |.+.+..+.+..+..  |..                       .+
T Consensus       188 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T 2b9h_A          188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYP  267 (353)
T ss_dssp             GCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCC
T ss_pred             ccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCC
Confidence               111  2356888 9 99999            666654443333211  100                       00


Q ss_pred             ------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         139 ------CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       139 ------~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                            .++.+|+++.+|+.+||+.||++|||++++++
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          268 AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                  12468899999999999999999999999987

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.25  E-value=2.5e-13  Score=103.66  Aligned_cols=106  Identities=14%  Similarity=0.054  Sum_probs=75.4

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccc-------------------------c
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVH-------------------------G  104 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~-------------------------~  104 (189)
                      ..++..++..+..+.+.|+.++|..+++|+|+ |+               |++.                         |
T Consensus       119 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  198 (351)
T 3mi9_A          119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE  198 (351)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCch
Confidence            34567777888889999999999999999996 55               2221                         1


Q ss_pred             C-C-CCCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCC---C-----------------------
Q psy1684         105 T-N-LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPP---G-----------------------  142 (189)
Q Consensus       105 ~-~-~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~---~-----------------------  142 (189)
                      . . ...++. + |||||            |.+.+..+....+........+.   .                       
T Consensus       199 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (351)
T 3mi9_A          199 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR  278 (351)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHH
T ss_pred             hhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHH
Confidence            1 1 244788 9 99999            66666666655553321111111   1                       


Q ss_pred             -----CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 -----CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 -----~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                           .++++.+|+.+||+.||++|||++|+++.
T Consensus       279 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          279 LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             HHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence                 26779999999999999999999999873

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.24  E-value=1.1e-13  Score=108.72  Aligned_cols=144  Identities=7%  Similarity=-0.090  Sum_probs=99.8

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCCc
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~gl   84 (189)
                      +.|+|++++++.+......|||+|++.++.     +..                 ++.. ...++......+..+.+.|+
T Consensus       131 ~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~-----L~~-----------------~l~~~~~~l~e~~~~~~~~qi~~aL  188 (437)
T 4aw2_A          131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGD-----LLT-----------------LLSKFEDRLPEEMARFYLAEMVIAI  188 (437)
T ss_dssp             SCTTTBCCEEEEEECSSEEEEEECCCTTCB-----HHH-----------------HHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEEEeeCCEEEEEEecCCCCc-----HHH-----------------HHHHccCCCCHHHHHHHHHHHHHHH
Confidence            456777776666655566677777776522     111                 3332 23455666667778888999


Q ss_pred             eeeccCCcccccc-cc---------------cccccC-----------------------C-----CCCccc-e-EEEec
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVHGT-----------------------N-----LSGVVV-S-AVDFG  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~-----~~~~~~-s-VwsfG  118 (189)
                      .++|..+++|||+ |+               |+++..                       .     .+.|+. + |||||
T Consensus       189 ~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlG  268 (437)
T 4aw2_A          189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG  268 (437)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHH
T ss_pred             HHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHH
Confidence            9999999999996 55               333211                       1     345889 9 99999


Q ss_pred             ------------CCCCChHHHHHHHHcC-CCCCCC---CCCCHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQVEHG-YRMPCP---PGCPPRLYDIMLECWLKDPVK--RPTFETLQWK  171 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g-~~~~~p---~~~p~~~~~l~~~C~~~~p~~--RP~~~~i~~~  171 (189)
                                  |.+.+..++...+..+ .+++.|   ..+++++.+||.+|+..+|+.  ||+++||++.
T Consensus       269 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          269 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             HHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence                        7777777777777432 233333   458999999999999888877  9999998763

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.24  E-value=1.8e-14  Score=108.74  Aligned_cols=109  Identities=12%  Similarity=0.053  Sum_probs=72.5

Q ss_pred             ccCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cccc----------------cc-------------------c
Q psy1684          61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL----------------VH-------------------G  104 (189)
Q Consensus        61 yl~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l----------------~~-------------------~  104 (189)
                      ++.....+....+..+..+.+.|+.++|..+++|+|+ |+.+                +.                   |
T Consensus       139 ~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE  218 (320)
T 3a99_A          139 FITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE  218 (320)
T ss_dssp             HHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHH
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChH
Confidence            3433344556666777788899999999999999996 5511                11                   1


Q ss_pred             C-CCCCc-cc-e-EEEec------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         105 T-NLSGV-VV-S-AVDFG------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       105 ~-~~~~~-~~-s-VwsfG------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      . ....+ +. + |||||      +.+..+.+-...+..+ ....+..+|+++.+||.+||+.||++|||+++|++
T Consensus       219 ~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC-CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc-cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0 12233 67 8 99999      1111110001122223 23456789999999999999999999999999986

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.24  E-value=3.8e-14  Score=109.04  Aligned_cols=96  Identities=10%  Similarity=-0.145  Sum_probs=65.8

Q ss_pred             HHhhhccCCceeeccCCcccccc-cc---------------cc------------------cccC-CC--CCccc-e-EE
Q psy1684          75 EHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NL--SGVVV-S-AV  115 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~--~~~~~-s-Vw  115 (189)
                      .+..+++.|+.++|..+++|||+ |+               |+                  |||. ..  ..|+. + ||
T Consensus       198 ~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~Diw  277 (371)
T 3q60_A          198 ILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAW  277 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHH
Confidence            44478889999999999999996 55               22                  2222 22  45888 9 99


Q ss_pred             Eec------------CCCCChHH--HHHH---H---HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         116 DFG------------SGGMTNAE--VLHQ---V---EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       116 sfG------------~~~~~~~~--~~~~---v---~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |||            |.+.....  ....   .   ......+.+..+|+++.+||.+||+.||++|||+.++++
T Consensus       278 SlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          278 QLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999            33332110  0000   0   112223344689999999999999999999999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.23  E-value=2.4e-13  Score=104.35  Aligned_cols=105  Identities=14%  Similarity=0.077  Sum_probs=73.7

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------------cccC-
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------------VHGT-  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------------~~~~-  105 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+               |+                        ++|. 
T Consensus       124 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  203 (364)
T 3qyz_A          124 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  203 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHh
Confidence            3556667777888889999999999999996 54               11                        1111 


Q ss_pred             -CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--CC-----------------------CCC-----CC
Q psy1684         106 -NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GY-----------------------RMP-----CP  140 (189)
Q Consensus       106 -~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~-----------------------~~~-----~p  140 (189)
                       ....++. + |||+|            |.+.+..+.+..+..  |.                       ...     .+
T Consensus       204 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (364)
T 3qyz_A          204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF  283 (364)
T ss_dssp             HTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred             cCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhC
Confidence             2344788 9 99999            666655444444321  10                       000     12


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+++++.+|+.+||+.||++|||+.++++.
T Consensus       284 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          284 PNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            4678999999999999999999999999863

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.23  E-value=8.2e-14  Score=109.39  Aligned_cols=98  Identities=10%  Similarity=-0.020  Sum_probs=61.5

Q ss_pred             HHHHhhhccCCceeeccCCcccccc-cccc--------------------------------------------cccCC-
Q psy1684          73 LVEHYSKDADGLCVNLRKPCVQVSC-RIYL--------------------------------------------VHGTN-  106 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~~~~~-p~~l--------------------------------------------~~~~~-  106 (189)
                      ...+..+++.|+.++|..+++|||+ |+.+                                            |+|.. 
T Consensus       120 ~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~  199 (432)
T 3p23_A          120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS  199 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTS
T ss_pred             HHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhh
Confidence            3455667788899999999999985 4411                                            22211 


Q ss_pred             ---CCCccc-e-EEEec-------------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q psy1684         107 ---LSGVVV-S-AVDFG-------------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFE  166 (189)
Q Consensus       107 ---~~~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~  166 (189)
                         ...++. + |||||             |.+....+....+.....  ...+...+..+.+|+.+||+.||++|||+.
T Consensus       200 ~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~  279 (432)
T 3p23_A          200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAK  279 (432)
T ss_dssp             CC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             cccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHH
Confidence               345778 8 99999             222222232222221111  111223456688999999999999999999


Q ss_pred             HHHH
Q psy1684         167 TLQW  170 (189)
Q Consensus       167 ~i~~  170 (189)
                      +|++
T Consensus       280 evl~  283 (432)
T 3p23_A          280 HVLK  283 (432)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            9984

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.23  E-value=9.1e-14  Score=108.49  Aligned_cols=142  Identities=10%  Similarity=-0.073  Sum_probs=92.8

Q ss_pred             CChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccCCc
Q psy1684           6 IKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         6 l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~gl   84 (189)
                      +.|+|++++++.+...+..|||+|++.++.     +..                 ++.. ...+.......+..+++.|+
T Consensus       118 ~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~-----L~~-----------------~l~~~~~~l~~~~~~~~~~qi~~aL  175 (412)
T 2vd5_A          118 GDRRWITQLHFAFQDENYLYLVMEYYVGGD-----LLT-----------------LLSKFGERIPAEMARFYLAEIVMAI  175 (412)
T ss_dssp             SCTTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeeeEEEEEeeCCEEEEEEcCCCCCc-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            456666666555544455666666665521     111                 2222 12455555666777888899


Q ss_pred             eeeccCCcccccc-cc---------------cccccC-----------------------C-------CCCccc-e-EEE
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVHGT-----------------------N-------LSGVVV-S-AVD  116 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~-------~~~~~~-s-Vws  116 (189)
                      .++|..+++|||+ |+               |+++..                       .       ...|+. + |||
T Consensus       176 ~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwS  255 (412)
T 2vd5_A          176 DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA  255 (412)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHH
T ss_pred             HHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhH
Confidence            9999999999996 55               222211                       1       245888 9 999


Q ss_pred             ec------------CCCCChHHHHHHHHcC---CC-CCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHHH
Q psy1684         117 FG------------SGGMTNAEVLHQVEHG---YR-MPCPPGCPPRLYDIMLECWLKDPVKR---PTFETLQW  170 (189)
Q Consensus       117 fG------------~~~~~~~~~~~~v~~g---~~-~~~p~~~p~~~~~l~~~C~~~~p~~R---P~~~~i~~  170 (189)
                      ||            |.+.+..++...+..+   .. +..+..+|+++.+||.+||. +|.+|   |++++|++
T Consensus       256 lGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             HhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            99            6777777777776432   12 22346899999999999999 99998   68888865

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.22  E-value=1.1e-13  Score=105.77  Aligned_cols=106  Identities=8%  Similarity=-0.120  Sum_probs=72.7

Q ss_pred             CCcCHhHHHHHhhhccCCceeec--cCCcccccc-cc----------------cccc--------------------cC-
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNL--RKPCVQVSC-RI----------------YLVH--------------------GT-  105 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~--~~~~~~~~~-p~----------------~l~~--------------------~~-  105 (189)
                      ..+....+..+..+.+.|+.++|  ..+++|+|+ |+                |++.                    |. 
T Consensus       124 ~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  203 (360)
T 3e3p_A          124 VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELI  203 (360)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHH
Confidence            34445555666777888899999  899999996 55                2221                    11 


Q ss_pred             CC-CCccc-e-EEEec------------CCCCChHHHHHHHHcCCC-------------------------------CCC
Q psy1684         106 NL-SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYR-------------------------------MPC  139 (189)
Q Consensus       106 ~~-~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~-------------------------------~~~  139 (189)
                      .. ..++. + |||||            |.+.+..+.+..+.+...                               ...
T Consensus       204 ~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (360)
T 3e3p_A          204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDH  283 (360)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTC
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchh
Confidence            12 33788 9 99999            666666555555432100                               112


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         140 PPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       140 p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +..+++++.+|+.+||+.||.+|||+.|+++.
T Consensus       284 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          284 SLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             CCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             hccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            23367899999999999999999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.22  E-value=1.1e-12  Score=102.88  Aligned_cols=31  Identities=16%  Similarity=0.122  Sum_probs=28.3

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+++++.+|+.+||..||++|||++|+++.
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            4688999999999999999999999999873

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.21  E-value=1.1e-13  Score=106.89  Aligned_cols=26  Identities=19%  Similarity=0.078  Sum_probs=23.9

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +++.+|+.+||+.||++|||++|+++
T Consensus       347 ~~~~dli~~mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          347 LKFKDLILRMLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHhcCCChhhCCCHHHHhc
Confidence            37889999999999999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.21  E-value=1.3e-12  Score=103.24  Aligned_cols=31  Identities=16%  Similarity=0.206  Sum_probs=28.1

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+++++.+|+.+||..||++|||++|+++.
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            3568999999999999999999999999874

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.18  E-value=1.6e-10  Score=82.58  Aligned_cols=80  Identities=31%  Similarity=0.330  Sum_probs=68.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|++..++++|. ....+|.||||++.+.+|.|+||++.  .+.++|++|....+| |......|. +.+|++++.
T Consensus        60 w~~g~isr~~ae~lL~-~~~~~G~fLvR~S~~~~g~~~LSv~~--~~~v~h~~I~~~~~g~~~~~~~~f~sl~eLv~~~~  136 (217)
T 1gri_A           60 WFFGKIPRAKAEEMLS-KQRHDGAFLIRESESAPGDFSLSVKF--GNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHR  136 (217)
T ss_dssp             SBCTTCCHHHHHHHHH-TCSSTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECSSSCEESSSCEESSHHHHHHHHH
T ss_pred             hhcccCCHHHHHHHHh-ccCCCceEEEEccCCCCCCEEEEEEE--CCEEEEEEEEEcCCCCEEEeeeEcCCHHHHHHhhh
Confidence            9999999999999884 34578999999999989999999999  999999999988888 433366788 999999998


Q ss_pred             hccCC
Q psy1684          79 KDADG   83 (189)
Q Consensus        79 ~~a~g   83 (189)
                      ....+
T Consensus       137 ~~~~~  141 (217)
T 1gri_A          137 STSVS  141 (217)
T ss_dssp             HSCSS
T ss_pred             ccccc
Confidence            76543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.15  E-value=1.3e-12  Score=101.65  Aligned_cols=28  Identities=21%  Similarity=0.318  Sum_probs=25.7

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.++.+|+.+||..||++|||++|+++.
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            6788999999999999999999999873

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.12  E-value=2.3e-12  Score=97.32  Aligned_cols=103  Identities=11%  Similarity=-0.091  Sum_probs=69.0

Q ss_pred             cCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccc--------------------cC-CC-C
Q psy1684          68 IHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVH--------------------GT-NL-S  108 (189)
Q Consensus        68 ~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~--------------------~~-~~-~  108 (189)
                      +...++..+..+.+.|+.++|..+++|+|+ |+                |++.                    |. .. .
T Consensus       127 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~  206 (330)
T 3nsz_A          127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ  206 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCC
Confidence            445566677788889999999999999996 55                2221                    11 22 5


Q ss_pred             Cccc-e-EEEec------------C-CCCChHHHHHH-------------HHcCC-----------------------CC
Q psy1684         109 GVVV-S-AVDFG------------S-GGMTNAEVLHQ-------------VEHGY-----------------------RM  137 (189)
Q Consensus       109 ~~~~-s-VwsfG------------~-~~~~~~~~~~~-------------v~~g~-----------------------~~  137 (189)
                      .++. + |||+|            | .+.+..+.+..             +....                       ..
T Consensus       207 ~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (330)
T 3nsz_A          207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS  286 (330)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCT
T ss_pred             cCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccc
Confidence            5888 9 99999            2 33333222221             11110                       01


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         138 PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       138 ~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+..+++++.+|+.+||+.||++|||++|+++
T Consensus       287 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          287 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             TTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            112237899999999999999999999999986

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.10  E-value=7.8e-12  Score=95.37  Aligned_cols=67  Identities=24%  Similarity=0.246  Sum_probs=0.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~   72 (189)
                      ||||.|+|..|+++|.  ...+|+||||+| +.+|.|+||++.  .+.++||+|....+|  ++.....|. +.+
T Consensus       303 WyhG~isR~~AE~LL~--~~~~G~FLVR~S-s~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~SL~e  372 (373)
T 3hhm_B          303 WNVGSSNRNKAENLLR--GKRDGTFLVRES-SKQGCYACSVVV--DGEVKHCVINKTATGYGFAEPYNLYSSLKE  372 (373)
T ss_dssp             ---------------------------------------------------------------------------
T ss_pred             CcCCCCCHHHHHHHhc--cCCCCcEEEEec-CCCCCEEEEEEE--CCeEEEEEEEEcCCCcEEeCCCCCCCChhh
Confidence            9999999999999884  337899999999 888999999999  999999999988888  444446676 554

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.10  E-value=1.9e-13  Score=112.95  Aligned_cols=149  Identities=11%  Similarity=0.022  Sum_probs=89.8

Q ss_pred             CCCCChHHHHHHhcCCCCCCC-----cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHh
Q psy1684           3 FGKIKRIEAEKKLLLPENDHG-----AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHY   77 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g-----~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~   77 (189)
                      ...++|+|++++++.+...+.     .|||+|++.+ +    ++..                 ++.  ..++..+.+.+.
T Consensus       133 l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g-~----~L~~-----------------~~~--~~l~~~~~~~~~  188 (681)
T 2pzi_A          133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG-Q----SLKR-----------------SKG--QKLPVAEAIAYL  188 (681)
T ss_dssp             GGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCC-E----ECC-----------------------CCCCHHHHHHHH
T ss_pred             HHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCC-C----cHHH-----------------HHh--CCCCHHHHHHHH
Confidence            346778888888776543332     4788887765 2    1111                 111  135577788888


Q ss_pred             hhccCCceeeccCCcccccc-cc--------------c-----------------ccccCCCCCccc-e-EEEec-----
Q psy1684          78 SKDADGLCVNLRKPCVQVSC-RI--------------Y-----------------LVHGTNLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~~~-p~--------------~-----------------l~~~~~~~~~~~-s-VwsfG-----  118 (189)
                      .+++.|+.++|..+++|+|+ |+              |                 +++|...+.++. + |||||     
T Consensus       189 ~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~  268 (681)
T 2pzi_A          189 LEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAA  268 (681)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHH
Confidence            89999999999999999996 55              1                 222222223477 8 99999     


Q ss_pred             -CCCCChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHHHh
Q psy1684         119 -SGGMTNAEVLHQVEHGYRMPC-PPGCPPRLYDIMLECWLKDPVKRPT-FETLQWKLEDFFT  177 (189)
Q Consensus       119 -~~~~~~~~~~~~v~~g~~~~~-p~~~p~~~~~l~~~C~~~~p~~RP~-~~~i~~~l~~~~~  177 (189)
                       ..+..+..-  ....+..... ...+++.+.+|+.+||+.||++||+ ++++...|..++.
T Consensus       269 l~~g~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          269 LTLDLPTRNG--RYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             HHSCCCEETT--EECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             HHhCCCCCcc--cccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence             111111000  0000100000 0124578999999999999999995 6666666766553

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.05  E-value=1.1e-10  Score=91.38  Aligned_cols=106  Identities=12%  Similarity=0.002  Sum_probs=75.0

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccc--------------------cC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVH--------------------GT-NL  107 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~--------------------~~-~~  107 (189)
                      ..+....+..+..+++.|+.++|..+++|||+ |+                |+++                    |. ..
T Consensus       151 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~  230 (420)
T 1j1b_A          151 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG  230 (420)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcC
Confidence            34455666777788899999999999999996 55                2222                    11 22


Q ss_pred             -CCccc-e-EEEec------------CCCCChHHHHHHHHc--C----------------CCCC----------CCCCCC
Q psy1684         108 -SGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--G----------------YRMP----------CPPGCP  144 (189)
Q Consensus       108 -~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g----------------~~~~----------~p~~~p  144 (189)
                       ..|+. + |||||            |.+.+..+.+..+.+  |                ...+          .+..+|
T Consensus       231 ~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  310 (420)
T 1j1b_A          231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTP  310 (420)
T ss_dssp             CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSC
T ss_pred             CCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCC
Confidence             35888 9 99999            777665444433321  1                0111          234678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         145 PRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       145 ~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +++.+|+.+||..||++|||+.|+++.
T Consensus       311 ~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          311 PEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            999999999999999999999999863

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.04  E-value=8.2e-12  Score=98.07  Aligned_cols=28  Identities=25%  Similarity=0.281  Sum_probs=25.7

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +++++.+|+.+||+.||++|||+.+|++
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            4578999999999999999999999975

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.03  E-value=3.3e-12  Score=104.69  Aligned_cols=151  Identities=13%  Similarity=0.020  Sum_probs=88.4

Q ss_pred             CCChHHHHHHhcCCCC------CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC---CCCcCHhHHHH
Q psy1684           5 KIKRIEAEKKLLLPEN------DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG---RTTIHYPELVE   75 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~------~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~---~~~~~l~~li~   75 (189)
                      .++|+|++++++.+..      ....+||+|++.++.     +..                 ++..   ...++...+..
T Consensus        68 ~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggs-----L~~-----------------~L~~~~~~~~lse~~i~~  125 (676)
T 3qa8_A           68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGD-----LRK-----------------YLNQFENCCGLKEGPIRT  125 (676)
T ss_dssp             HCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCB-----HHH-----------------HHHSSSCTTCCCSSHHHH
T ss_pred             hCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCC-----HHH-----------------HHHhcccCCCCCHHHHHH
Confidence            4578888877765433      445677888776522     111                 1211   11244555666


Q ss_pred             HhhhccCCceeeccCCcccccc-cc--------------------------------------cccccC-CCCCccc-e-
Q psy1684          76 HYSKDADGLCVNLRKPCVQVSC-RI--------------------------------------YLVHGT-NLSGVVV-S-  113 (189)
Q Consensus        76 ~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------------~l~~~~-~~~~~~~-s-  113 (189)
                      +..+.+.|+.++|..+++|+|+ |+                                      ++++|. ....++. + 
T Consensus       126 I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksD  205 (676)
T 3qa8_A          126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVD  205 (676)
T ss_dssp             HHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHH
T ss_pred             HHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhH
Confidence            7778888999999999999986 44                                      122222 3456888 9 


Q ss_pred             EEEec------------CCCCC-hHHHH--------HH-H----HcC-----CCCCCCC----CCCHHHHHHHHHhcccC
Q psy1684         114 AVDFG------------SGGMT-NAEVL--------HQ-V----EHG-----YRMPCPP----GCPPRLYDIMLECWLKD  158 (189)
Q Consensus       114 VwsfG------------~~~~~-~~~~~--------~~-v----~~g-----~~~~~p~----~~p~~~~~l~~~C~~~~  158 (189)
                      |||||            |.+.. +.+..        .. .    ..|     ..++.|.    .+|+++.+|+.+||..|
T Consensus       206 IwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D  285 (676)
T 3qa8_A          206 YWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH  285 (676)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCC
Confidence            99999            22211 11100        00 0    011     1122232    35678999999999999


Q ss_pred             CCCCCCHHH-----HHHHHHHHHh
Q psy1684         159 PVKRPTFET-----LQWKLEDFFT  177 (189)
Q Consensus       159 p~~RP~~~~-----i~~~l~~~~~  177 (189)
                      |++|||+++     ..+.++.+++
T Consensus       286 P~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          286 QRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             CC---CCTTCCCCTTHHHHHHHHC
T ss_pred             HhhCcCHHHHhcCHHHHHHHHHHh
Confidence            999999988     4566666665

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.01  E-value=5.5e-11  Score=89.75  Aligned_cols=105  Identities=14%  Similarity=0.077  Sum_probs=73.7

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-ccccc--c----------------------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLV--H----------------------------------------  103 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~--~----------------------------------------  103 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+.+.  .                                        
T Consensus       114 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  193 (339)
T 1z57_A          114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST  193 (339)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCS
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccccc
Confidence            3456777788889999999999999999996 55221  1                                        


Q ss_pred             ----------cC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCC--------------------
Q psy1684         104 ----------GT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR--------------------  136 (189)
Q Consensus       104 ----------~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~--------------------  136 (189)
                                |. ....++. + |||||            |.+.+..+....+..  +..                    
T Consensus       194 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  273 (339)
T 1z57_A          194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLD  273 (339)
T ss_dssp             SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEEC
T ss_pred             ccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccc
Confidence                      00 3456889 9 99999            666665554444322  110                    


Q ss_pred             ---------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         137 ---------------------MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       137 ---------------------~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                                           ...+..+++++.+|+.+||+.||++|||++|+++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          274 WDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             CCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence                                 01122346789999999999999999999999753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.01  E-value=6.3e-11  Score=90.04  Aligned_cols=104  Identities=15%  Similarity=0.048  Sum_probs=72.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cccccc------------------------------------------
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLVH------------------------------------------  103 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~~------------------------------------------  103 (189)
                      .++...+..+..+.+.|+.++|..+++|+|+ |+.+.-                                          
T Consensus       119 ~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  198 (355)
T 2eu9_A          119 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT  198 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccC
Confidence            4557777888889999999999999999996 552211                                          


Q ss_pred             ----------cC-CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCCC-------------------
Q psy1684         104 ----------GT-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYRM-------------------  137 (189)
Q Consensus       104 ----------~~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~~-------------------  137 (189)
                                |. ....++. + |||+|            |.+.+..+.+..+..  +..+                   
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  278 (355)
T 2eu9_A          199 IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLV  278 (355)
T ss_dssp             SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEEC
T ss_pred             CcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccc
Confidence                      00 3556889 9 99999            666555554444322  1100                   


Q ss_pred             ----------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         138 ----------------------PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       138 ----------------------~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                            ..+...+.++.+|+.+||+.||++|||+.++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          279 WDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             CCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                                  001122458889999999999999999999975

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.96  E-value=3.8e-11  Score=93.71  Aligned_cols=93  Identities=6%  Similarity=-0.141  Sum_probs=64.0

Q ss_pred             HHHHHhhhccCCceeeccCCcccccc-cc---------------ccc-----------------ccCC----------C-
Q psy1684          72 ELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLV-----------------HGTN----------L-  107 (189)
Q Consensus        72 ~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~-----------------~~~~----------~-  107 (189)
                      ..+.+..+++.|+.++|..+++|||+ |+               |++                 +|..          . 
T Consensus       212 ~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~  291 (413)
T 3dzo_A          212 ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHP  291 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccC
Confidence            34445578889999999999999996 55               222                 2211          2 


Q ss_pred             CCccc-e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q psy1684         108 SGVVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ  169 (189)
Q Consensus       108 ~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~  169 (189)
                      ..|+. + |||||            |.+.+..++...+..     ....+|+++.+||.+||+.||++|||+.+++
T Consensus       292 ~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             cCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh-----hcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            23788 8 99999            444333322222211     2246889999999999999999999976663

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.94  E-value=4.6e-11  Score=91.55  Aligned_cols=31  Identities=19%  Similarity=0.128  Sum_probs=27.6

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         140 PPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       140 p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |..++.++.+|+.+||+.||++|||++++++
T Consensus       303 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          303 SKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             CHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             CcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence            4456678999999999999999999999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.85  E-value=6.1e-10  Score=85.33  Aligned_cols=144  Identities=8%  Similarity=-0.091  Sum_probs=95.7

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-----CCCCcCHhHHHHHhhhcc
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-----GRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-----~~~~~~l~~li~~~~~~a   81 (189)
                      .|+|++.+++.+...+..+||+|++.++.     +..                 ++.     ....++...+..+..+++
T Consensus       125 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~l~~~~~~~i~~qi~  182 (365)
T 3e7e_A          125 MQHMFMKFYSAHLFQNGSVLVGELYSYGT-----LLN-----------------AINLYKNTPEKVMPQGLVISFAMRML  182 (365)
T ss_dssp             GGGGBCCEEEEEECSSCEEEEECCCCSCB-----HHH-----------------HHHHHHTSTTCSCCHHHHHHHHHHHH
T ss_pred             hhhhhhhhheeeecCCCcEEEEeccCCCc-----HHH-----------------HHHHhhcccccCCCHHHHHHHHHHHH
Confidence            36777777776666677788888877622     111                 121     133455777888888999


Q ss_pred             CCceeeccCCcccccc-cccc--cc-----------cC-------------------------------------CCCCc
Q psy1684          82 DGLCVNLRKPCVQVSC-RIYL--VH-----------GT-------------------------------------NLSGV  110 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~~l--~~-----------~~-------------------------------------~~~~~  110 (189)
                      .|+.++|..+++|||+ |+.+  ..           ..                                     ....|
T Consensus       183 ~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  262 (365)
T 3e7e_A          183 YMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPW  262 (365)
T ss_dssp             HHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCB
T ss_pred             HHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCC
Confidence            9999999999999996 5511  11           01                                     44558


Q ss_pred             cc-e-EEEecCCCCChHHHHHHHHcCCCC--------------CCCCCCCHHHHHHHHHhcccCCCCC-CCHHHHHHHHH
Q psy1684         111 VV-S-AVDFGSGGMTNAEVLHQVEHGYRM--------------PCPPGCPPRLYDIMLECWLKDPVKR-PTFETLQWKLE  173 (189)
Q Consensus       111 ~~-s-VwsfG~~~~~~~~~~~~v~~g~~~--------------~~p~~~p~~~~~l~~~C~~~~p~~R-P~~~~i~~~l~  173 (189)
                      +. + |||||       -++..+..|..|              -.....++.+.+++..|++.+|.+| |+++++.+.|+
T Consensus       263 ~~~~DiwslG-------~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~  335 (365)
T 3e7e_A          263 NYQIDYFGVA-------ATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK  335 (365)
T ss_dssp             STHHHHHHHH-------HHHHHHHHSSCCCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred             CccccHHHHH-------HHHHHHHhCCCccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence            88 8 99998       011111111111              0111345788899999999999998 68899999999


Q ss_pred             HHHhhc
Q psy1684         174 DFFTME  179 (189)
Q Consensus       174 ~~~~~~  179 (189)
                      .++...
T Consensus       336 ~~l~~~  341 (365)
T 3e7e_A          336 KVFQQH  341 (365)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888754

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.82  E-value=5.6e-10  Score=86.07  Aligned_cols=33  Identities=12%  Similarity=0.049  Sum_probs=27.5

Q ss_pred             CcCHhHHHHHhhhccCCceeeccC-Ccccccc-cc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRK-PCVQVSC-RI   99 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~-~~~~~~~-p~   99 (189)
                      .++...+..+..+.+.|+.++|.. +++|+|+ |+
T Consensus       142 ~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~  176 (397)
T 1wak_A          142 GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPE  176 (397)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence            355677778888999999999998 9999996 55

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.53  E-value=1.9e-08  Score=76.06  Aligned_cols=134  Identities=7%  Similarity=-0.118  Sum_probs=85.7

Q ss_pred             hHHHHHHhcCCCC-------------CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHH
Q psy1684           8 RIEAEKKLLLPEN-------------DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELV   74 (189)
Q Consensus         8 ~~n~~~lL~~~~~-------------~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li   74 (189)
                      |+|++++++....             ....|||+|++..+.     ...                 .+. +..++...+.
T Consensus       108 hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~-----ll~-----------------~~~-~~~~~~~~~~  164 (336)
T 2vuw_A          108 PPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGI-----DLE-----------------QMR-TKLSSLATAK  164 (336)
T ss_dssp             CHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCE-----ETG-----------------GGT-TTCCCHHHHH
T ss_pred             cHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCc-----cHH-----------------HHH-hcCCCHHHHH
Confidence            8999998875432             456788888877632     111                 121 1234567777


Q ss_pred             HHhhhccCCceeec-cCCcccccc-cc-------c--------------------------------------------c
Q psy1684          75 EHYSKDADGLCVNL-RKPCVQVSC-RI-------Y--------------------------------------------L  101 (189)
Q Consensus        75 ~~~~~~a~gl~~~~-~~~~~~~~~-p~-------~--------------------------------------------l  101 (189)
                      .+..+++.|+.++| ..+++|||+ |+       +                                            +
T Consensus       165 ~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~  244 (336)
T 2vuw_A          165 SILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSM  244 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTT
T ss_pred             HHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeeccc
Confidence            88889999999999 899999996 55       1                                            1


Q ss_pred             cccCCCCCccc-e-EEEec-------CCCCChHH-------HHHHHHcCCCCC------CCCCCCHHHHHHHHHhcccCC
Q psy1684         102 VHGTNLSGVVV-S-AVDFG-------SGGMTNAE-------VLHQVEHGYRMP------CPPGCPPRLYDIMLECWLKDP  159 (189)
Q Consensus       102 ~~~~~~~~~~~-s-VwsfG-------~~~~~~~~-------~~~~v~~g~~~~------~p~~~p~~~~~l~~~C~~~~p  159 (189)
                      |+|...+..+. + |||+|       +.+..+..       +...+......+      .+..+++++.+|+.+||+.| 
T Consensus       245 aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-  323 (336)
T 2vuw_A          245 DEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-  323 (336)
T ss_dssp             CSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-
T ss_pred             ChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-
Confidence            12212334477 8 99987       44554432       223333221111      12357789999999999976 


Q ss_pred             CCCCCHHHHH
Q psy1684         160 VKRPTFETLQ  169 (189)
Q Consensus       160 ~~RP~~~~i~  169 (189)
                          |++|++
T Consensus       324 ----sa~e~l  329 (336)
T 2vuw_A          324 ----SATDLL  329 (336)
T ss_dssp             ----SHHHHH
T ss_pred             ----CHHHHH
Confidence                888877

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=98.38  E-value=9.8e-07  Score=60.46  Aligned_cols=72  Identities=17%  Similarity=0.125  Sum_probs=57.5

Q ss_pred             CCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           2 YFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         2 ~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      |+ +++..+|+++|..   .+|.||||+|.. ++.++++++.. ++.++|++|.....-|+-++..|. |.+++..+.+
T Consensus        17 F~-n~s~~qAe~~L~~---~~G~~liRPSsk-~~~ltit~Kv~-d~~~~Hi~I~E~~k~l~ig~~~fedLDElI~~yv~   89 (178)
T 2xp1_A           17 FK-NFNVTESENYLRS---STDDFLIRKGSR-HGYCVLVIKFA-SDVFVHMKIEEHSEHYTCSNKHFEDIDEVISVYVR   89 (178)
T ss_dssp             EE-CCCHHHHHHHHHH---SSCCEEEEECSS-TTEEEEEEEEE-TTEEEEEEEEECSSCEEETTEEESSHHHHHHHTHH
T ss_pred             cC-CCCHHHHHHHHhc---CCCCEEEeecCC-CCcEEEEEEEC-CCcEEEEEEEECCCEEEECCcEECCHHHHHHHHHH
Confidence            44 7999999999975   359999999987 68899999942 778999999764433555566898 9999988765

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.72  E-value=4.5e-07  Score=73.54  Aligned_cols=68  Identities=12%  Similarity=0.013  Sum_probs=44.2

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      .|+|+++++.....+...|||+|++++ +    ++..                 +|.....+...+   +..+++.|+.+
T Consensus       300 ~~~~i~~~~~~~ed~~~~yLVMEyv~G-~----~L~d-----------------~i~~~~~l~~~~---I~~QIl~AL~y  354 (569)
T 4azs_A          300 AGFDAPAVLAHGENAQSGWLVMEKLPG-R----LLSD-----------------MLAAGEEIDREK---ILGSLLRSLAA  354 (569)
T ss_dssp             TTCCCCCEEEEEECSSEEEEEEECCCS-E----EHHH-----------------HHHTTCCCCHHH---HHHHHHHHHHH
T ss_pred             CCCCeeEEEEEEEECCEEEEEEecCCC-C----cHHH-----------------HHHhCCCCCHHH---HHHHHHHHHHH
Confidence            456666666655555567777777765 3    2222                 333344444333   34688899999


Q ss_pred             eccCCcccccc-cc
Q psy1684          87 NLRKPCVQVSC-RI   99 (189)
Q Consensus        87 ~~~~~~~~~~~-p~   99 (189)
                      +|..+|+|||+ |+
T Consensus       355 lH~~GIIHRDIKPe  368 (569)
T 4azs_A          355 LEKQGFWHDDVRPW  368 (569)
T ss_dssp             HHHTTCEESCCCGG
T ss_pred             HHHCCceeccCchH
Confidence            99999999996 66

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=97.32  E-value=0.00048  Score=53.73  Aligned_cols=54  Identities=22%  Similarity=0.279  Sum_probs=45.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEe
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRS   56 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~   56 (189)
                      |+||.|++.+++.+|..  ...|+||+|-|.+..|.+++++... ..+.++|+.+..
T Consensus       353 ~I~GFIsk~ea~~lL~~--~~~GTFLLRFSeS~~GgitIsyV~~d~~~~~kh~~v~p  407 (473)
T 1uur_A          353 IIYGYMGRQEVNDALQN--QDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQP  407 (473)
T ss_dssp             SSCBSCCHHHHHHTTSS--CCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCG
T ss_pred             cEEEEecHHHHHHHhhC--CCCCeEEEEeccCCCceEEEEEEeecCCCceeEEEecC
Confidence            89999999999999954  5789999999999889999999873 236888887764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=96.66  E-value=2.1e-05  Score=60.40  Aligned_cols=74  Identities=7%  Similarity=0.046  Sum_probs=56.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+...+..+||+|+++++.     +..                 ++.. ...+....+..+..+++.
T Consensus       167 ~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~~~~qi~~  224 (377)
T 3cbl_A          167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD-----FLT-----------------FLRTEGARLRVKTLLQMVGDAAA  224 (377)
T ss_dssp             TTCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHH-----------------HHHHHGGGCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            46789999999998887778899999988632     211                 2221 123457778888889999


Q ss_pred             CceeeccCCcccccc-cc
Q psy1684          83 GLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~   99 (189)
                      |+.++|..+++|+|+ |+
T Consensus       225 ~l~~LH~~~ivHrDlkp~  242 (377)
T 3cbl_A          225 GMEYLESKCCIHRDLAAR  242 (377)
T ss_dssp             HHHHHHHTTEECSCCSGG
T ss_pred             HHHHHHHCCcCCcccCHH
Confidence            999999999999996 55

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.54  E-value=6e-05  Score=60.01  Aligned_cols=72  Identities=11%  Similarity=0.026  Sum_probs=54.6

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+......+||+|++.++.     +..                 ++..  ...+....++.+..+++.
T Consensus       272 ~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~~i~~qi~~  329 (495)
T 1opk_A          272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGN-----LLD-----------------YLRECNRQEVSAVVLLYMATQISS  329 (495)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHH-----------------HHHHSCTTTSCHHHHHHHHHHHHH
T ss_pred             hcCCCCEeeEEEEEecCCcEEEEEEccCCCC-----HHH-----------------HHHhcCcCCCCHHHHHHHHHHHHH
Confidence            5789999999998888888899999988632     222                 2221  223456777788889999


Q ss_pred             CceeeccCCccccccc
Q psy1684          83 GLCVNLRKPCVQVSCR   98 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p   98 (189)
                      |+.++|..+++|+|+.
T Consensus       330 ~L~~LH~~~ivHrDlk  345 (495)
T 1opk_A          330 AMEYLEKKNFIHRNLA  345 (495)
T ss_dssp             HHHHHHHTTEECSCCS
T ss_pred             HHHHHHhCCcccCCCC
Confidence            9999999999999963

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=96.29  E-value=5.9e-05  Score=59.33  Aligned_cols=73  Identities=8%  Similarity=0.124  Sum_probs=53.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+. .+..+||+|++.++.     +..                 ++...  ..+....++.+..+++
T Consensus       238 ~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~qi~  294 (454)
T 1qcf_A          238 KTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS-----LLD-----------------FLKSDEGSKQPLPKLIDFSAQIA  294 (454)
T ss_dssp             TTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB-----HHH-----------------HHHSHHHHTCCHHHHHHHHHHHH
T ss_pred             hhCCCCCEeeEEEEEe-CCccEEEEeecCCCc-----HHH-----------------HHHhccCCCCCHHHHHHHHHHHH
Confidence            4678999999888775 566889999888732     222                 22211  1344677888889999


Q ss_pred             CCceeeccCCcccccc-cc
Q psy1684          82 DGLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~   99 (189)
                      .|+.++|..+++|+|+ |+
T Consensus       295 ~~l~~LH~~~ivHrDlkp~  313 (454)
T 1qcf_A          295 EGMAFIEQRNYIHRDLRAA  313 (454)
T ss_dssp             HHHHHHHHTTCCCSSCSGG
T ss_pred             HHHHHHHhCCccCCCCCHH
Confidence            9999999999999996 44

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.18  E-value=7.8e-05  Score=58.61  Aligned_cols=72  Identities=7%  Similarity=0.053  Sum_probs=50.9

Q ss_pred             CCCChHHHHHHhcCCCCCC-CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhc
Q psy1684           4 GKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKD   80 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~-g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~   80 (189)
                      ..++|+|++++++.+...+ ..+||+|++.++.     +..                 ++..  ...+....++.+..++
T Consensus       241 ~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~~~~~qi  298 (450)
T 1k9a_A          241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS-----LVD-----------------YLRSRGRSVLGGDCLLKFSLDV  298 (450)
T ss_dssp             HTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB-----HHH-----------------HHHHHCTTTCCHHHHHHHHHHH
T ss_pred             HhccCCCEEEEEEEEEcCCCceEEEEEecCCCc-----HHH-----------------HHHhcCCCCCCHHHHHHHHHHH
Confidence            3578999999888765444 5789999888632     222                 2221  1124466777888888


Q ss_pred             cCCceeeccCCcccccc
Q psy1684          81 ADGLCVNLRKPCVQVSC   97 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~   97 (189)
                      +.|+.++|..+++|+|+
T Consensus       299 ~~~l~~LH~~~ivHrDl  315 (450)
T 1k9a_A          299 CEAMEYLEGNNFVHRDL  315 (450)
T ss_dssp             HHHHHHHHHTTEECSCC
T ss_pred             HHHHHHHHhCCeeCCCC
Confidence            99999999999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=95.90  E-value=0.0002  Score=56.31  Aligned_cols=72  Identities=14%  Similarity=0.185  Sum_probs=52.4

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+.. ...+||+|++.++.     +..                 ++..  ...+...+++.+..+++.
T Consensus       235 ~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gs-----L~~-----------------~l~~~~~~~~~~~~~~~i~~qi~~  291 (452)
T 1fmk_A          235 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS-----LLD-----------------FLKGETGKYLRLPQLVDMAAQIAS  291 (452)
T ss_dssp             HCCCTTBCCEEEEECS-SSCEEEECCCTTCB-----HHH-----------------HHSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEcC-CceEEEehhhcCCC-----HHH-----------------HHHhcCCCCCCHHHHHHHHHHHHH
Confidence            4678899988887754 66889999887632     222                 2221  123457778888899999


Q ss_pred             CceeeccCCcccccc-cc
Q psy1684          83 GLCVNLRKPCVQVSC-RI   99 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~   99 (189)
                      |+.++|..+++|+|+ |+
T Consensus       292 ~l~~LH~~~ivHrDlkp~  309 (452)
T 1fmk_A          292 GMAYVERMNYVHRDLRAA  309 (452)
T ss_dssp             HHHHHHHTTCCCSCCSGG
T ss_pred             HHHHHHhCCeeCCCCChh
Confidence            999999999999996 44

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=95.89  E-value=0.00021  Score=57.51  Aligned_cols=71  Identities=17%  Similarity=0.229  Sum_probs=51.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhccC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a~   82 (189)
                      .++|+|++++++.+.. ...+||+|++.+ |    ++..                 ++..  ...+...+++.+..+++.
T Consensus       318 ~l~hpniv~~~~~~~~-~~~~lv~e~~~~-g----sL~~-----------------~l~~~~~~~l~~~~~~~i~~qi~~  374 (535)
T 2h8h_A          318 KLRHEKLVQLYAVVSE-EPIYIVTEYMSK-G----SLLD-----------------FLKGETGKYLRLPQLVDMAAQIAS  374 (535)
T ss_dssp             HCCCTTBCCEEEEECS-SSCEEEECCCTT-E----EHHH-----------------HHSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             hCCCCCEeeEEEEEee-ccceEeeehhcC-C----cHHH-----------------HHhhcCCCCCCHHHHHHHHHHHHH
Confidence            4678888888887754 567888888876 3    2222                 2321  123457778888899999


Q ss_pred             CceeeccCCccccccc
Q psy1684          83 GLCVNLRKPCVQVSCR   98 (189)
Q Consensus        83 gl~~~~~~~~~~~~~p   98 (189)
                      |+.++|..+++|+|+.
T Consensus       375 ~L~~LH~~~ivHrDlk  390 (535)
T 2h8h_A          375 GMAYVERMNYVHRDLR  390 (535)
T ss_dssp             HHHHHHHTTCCCSCCS
T ss_pred             HHHHHHhCCeeCCCCC
Confidence            9999999999999963

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=95.79  E-value=0.023  Score=41.88  Aligned_cols=49  Identities=14%  Similarity=0.170  Sum_probs=41.8

Q ss_pred             CCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeE
Q psy1684           2 YFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKM   51 (189)
Q Consensus         2 ~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h   51 (189)
                      |++.++-.||.++|..+.+..|+||+|-|++..|.+.++.... ++.+.|
T Consensus       246 y~aFlTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~-~~~I~q  294 (329)
T 3bux_B          246 YMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTA-DGNILQ  294 (329)
T ss_dssp             BCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECT-TSCEEE
T ss_pred             hhheeeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECC-CCceee
Confidence            6778999999999987778999999999999999999988773 455544

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=95.78  E-value=0.035  Score=37.90  Aligned_cols=73  Identities=12%  Similarity=0.033  Sum_probs=51.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      ||++  +.++++++|.......-.|.++++...+|.|.+++..   +.+.|.-|... .||--.+..|. +.+|++++.+
T Consensus       103 kf~~--s~~~~e~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~~---~~~~~e~i~V~-~g~~~~~~~f~sl~~L~~~fK~  176 (178)
T 2xp1_A          103 KYFN--SPEDAEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYNN---GSILEEYIGVS-DMLTYNNSTFKDIDSFVAYRKR  176 (178)
T ss_dssp             TBCS--CTTTSHHHHHTCCSSSCEEEEEECSSSTTEEEEEEES---SSEEEEEEEES-SSEEETTEEESSHHHHHHHHHC
T ss_pred             ccCC--CHHHHHHHHHHhCCCCceEEEEecCCCCCeEEEEEcC---CCCceeeEEEc-cCCEEcCcCCcCHHHHHHHHhh
Confidence            6776  7788999886441111238888998899999998854   35666556555 45222677888 9999999875

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=95.43  E-value=0.027  Score=41.25  Aligned_cols=49  Identities=14%  Similarity=0.261  Sum_probs=41.8

Q ss_pred             CCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeE
Q psy1684           2 YFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKM   51 (189)
Q Consensus         2 ~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h   51 (189)
                      |+|.|+-.||.+.|..+.+..|+||+|-|++..|.+.++.... ++.+.+
T Consensus       231 y~aFlTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s-~g~I~q  279 (323)
T 3op0_A          231 YMAFLTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSS-DGSILQ  279 (323)
T ss_dssp             BCTTCCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECT-TSCEEE
T ss_pred             eeeeeeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcC-CCceee
Confidence            6789999999999987788999999999999999999988873 444444

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=93.76  E-value=0.14  Score=42.02  Aligned_cols=42  Identities=29%  Similarity=0.404  Sum_probs=35.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCC-CCCceEEEEEec
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSES-RKNDYSLSEYKR   44 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~-~~~~~~ls~~~~   44 (189)
                      |.+|.|++..++.+|.  ...+|+||+|-|.+ ..|.+++++...
T Consensus       577 ~I~GFIsK~~a~~lL~--~~~~GTFLLRFSdS~~~Ggitia~V~~  619 (683)
T 1yvl_A          577 CIMGFISKERERALLK--DQQPGTFLLRFSESSREGAITFTWVER  619 (683)
T ss_dssp             CCCBCCCHHHHHHHHS--SSCSSCEEEEECSSCSSCEEEEEEEEC
T ss_pred             ceEEeecHHHHHHHHh--CCCCCeEEEecCCCCCCCceEEEEEec
Confidence            5689999999999995  45889999999988 889888888763

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=93.35  E-value=0.083  Score=42.69  Aligned_cols=41  Identities=22%  Similarity=0.286  Sum_probs=36.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEe
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYK   43 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~   43 (189)
                      |.+|.|++..++.+|..  ...|+||+|-|.+..|.+++++..
T Consensus       466 ~I~Gfisk~~a~~~L~~--~~~GtFLlRFSds~~G~~tisyv~  506 (585)
T 1y1u_A          466 AILGFVNKQQAHDLLIN--KPDGTFLLRFSDSEIGGITIAWKF  506 (585)
T ss_dssp             CCCBSCCHHHHHHHHHT--SCTTCEEEEEETTSTTEEEEEECC
T ss_pred             ceEEeccHHHHHHHHhC--CCCCceEEEeccCCcCcEEEEEEe
Confidence            57899999999999964  578999999999888989998877

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=91.49  E-value=0.24  Score=39.82  Aligned_cols=41  Identities=27%  Similarity=0.375  Sum_probs=34.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCC-CCCceEEEEEe
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSES-RKNDYSLSEYK   43 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~-~~~~~~ls~~~   43 (189)
                      |.+|.|++..++.+|.  ....|+||+|-|.+ ..|.+++++..
T Consensus       442 ~I~GFIsK~~a~~lL~--~~~~GTFLLRFSdS~~~GgITia~V~  483 (575)
T 1bf5_A          442 CIMGFISKERERALLK--DQQPGTFLLRFSESSREGAITFTWVE  483 (575)
T ss_dssp             CCCCCCCHHHHHHHTT--TCCSCCCCEEECSSCSSCCEEEEECC
T ss_pred             ceEEeecHHHHHHHHh--CCCCCeEEEecCCCCCCCcEEEEEEe
Confidence            5689999999999884  45789999999888 88888888866

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=91.22  E-value=0.035  Score=44.75  Aligned_cols=41  Identities=24%  Similarity=0.366  Sum_probs=34.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCC-CCCceEEEEEe
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSES-RKNDYSLSEYK   43 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~-~~~~~~ls~~~   43 (189)
                      |.+|.|++..++.+|.  ....|+||+|-|.+ ..|.+++++..
T Consensus       458 ~I~Gfisk~~a~~lL~--~~~~GTFLlRFSes~~~Ggitis~v~  499 (596)
T 1bg1_A          458 YIMGFISKERERAILS--TKPPGTFLLRFSESSKEGGVTFTWVE  499 (596)
T ss_dssp             CCCBCCCTTGGGTTTT--TSCTTCBCEEECSSCSSCCEEECCCC
T ss_pred             CeEEEecHHHHHHHHh--CCCCCeeEEeecCCCCCCcEEEEEEe
Confidence            5689999999999885  45789999999888 77888887766

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=89.18  E-value=0.0057  Score=49.25  Aligned_cols=27  Identities=4%  Similarity=-0.118  Sum_probs=21.5

Q ss_pred             HHhhhccCCceeeccCCcccccc-cccc
Q psy1684          75 EHYSKDADGLCVNLRKPCVQVSC-RIYL  101 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~~~~-p~~l  101 (189)
                      .+..+.+.|+.++|...++|||+ |+.+
T Consensus       435 ~i~~qi~~aL~~LH~~gIiHrDiKp~NI  462 (540)
T 3en9_A          435 DIAYKIGEIVGKLHKNDVIHNDLTTSNF  462 (540)
T ss_dssp             HHHHHHHHHHHHHHHTTEECTTCCTTSE
T ss_pred             HHHHHHHHHHHHHHHCcCccCCCCHHHE
Confidence            44566778999999999999996 6644

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=86.10  E-value=0.14  Score=44.97  Aligned_cols=72  Identities=14%  Similarity=0.142  Sum_probs=0.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccC------C--ccCCCCCcC-HhHHH
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFE------T--QKAGRTTIH-YPELV   74 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~------g--yl~~~~~~~-l~~li   74 (189)
                      .+++...|+++|.  ....|.++||.|..+.+.++++++.. .+...|+.|.....      |  +.-++..|. |.+++
T Consensus      1028 ~n~~~~qAe~~L~--~~~~Gd~vIRPSSkG~dhLtvTwKv~-d~vyqHidV~E~~K~n~~slG~~L~I~~~~y~DLDEli 1104 (1219)
T 3psi_A         1028 FPFNGRQAEDYLR--SKERGEFVIRQSSRGDDHLVITWKLD-KDLFQHIDIQELEKENPLALGKVLIVDNQKYNDLDQII 1104 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCHHHHHHHHh--cCCCCCEEEeecCCCCCceEEEEEEc-CCcEEEEEEEecCCccccccCceEEECCceECCHHHHH
Confidence            4677788999994  45679999999988777788888875 67889998875332      2  333445787 88887


Q ss_pred             HHhh
Q psy1684          75 EHYS   78 (189)
Q Consensus        75 ~~~~   78 (189)
                      .-|.
T Consensus      1105 ~r~V 1108 (1219)
T 3psi_A         1105 VEYL 1108 (1219)
T ss_dssp             ----
T ss_pred             HHHH
Confidence            5443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	189
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	1e-22
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	4e-22
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	8e-22
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	8e-22
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	2e-21
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	2e-21
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	3e-21
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	4e-21
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	1e-20
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	2e-20
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	3e-20
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	6e-20
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	1e-19
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	2e-19
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	2e-19
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	3e-18
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	7e-18
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	9e-18
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	2e-17
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-17
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-16
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	1e-15
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-15
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	9e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-14
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	4e-14
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	4e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-13
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-13
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-13
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	3e-13
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	4e-13
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	8e-13
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-12
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	2e-12
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	4e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-12
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-12
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-11
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	1e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-11
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-11
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-11
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	4e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-10
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-10
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	2e-09
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	2e-09
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-08
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	2e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-05
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.003
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.004

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 1e-22
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS------FCLKMTTG 54
           W+F  + R +AE++LL P N HG+FLIR+SES    +SLS               K+   
Sbjct: 6   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65

Query: 55  RSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
            +         T     ELV HY+  +DGLC  L +PC
Sbjct: 66  DNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC 103

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.4 bits (208), Expect = 4e-22
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 9/103 (8%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-------EYKRSSFCLKMTT 53
           W+F  I R +AE++LL P N  G+FLIR+SES K  +SLS             + ++   
Sbjct: 14  WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 54  GRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS 96
               + + +    T+    LV+HYSK  DGLC  L  PCV ++
Sbjct: 74  NGGYYISPRITFPTLQ--ALVQHYSKKGDGLCQKLTLPCVNLA 114

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 8e-22
 Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           W+F  I R +AE++LL P N  G+F+IRDSE+ K  YSLS  +        T       T
Sbjct: 3   WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLS-VRDYDPRQGDTVKHYKIRT 61

Query: 61  QKAGRTTI-------HYPELVEHYSKDADGLCVNLRKPCVQ 94
              G   I          ELV+HY K  DGLC  L  PC+ 
Sbjct: 62  LDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMS 102

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 8e-22
 Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           WYFGKI R E+E+ LL  EN  G FL+R+SE+ K  Y LS     +          + + 
Sbjct: 7   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 66

Query: 61  QKAGRTTIHY------PELVEHYSKDADGLCVNLRKPC 92
              G             +LV +YSK ADGLC  L   C
Sbjct: 67  DSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVC 104

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (203), Expect = 2e-21
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 5/99 (5%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-----EYKRSSFCLKMTTGR 55
           W+ G+I R E+ + +       G FL+RDS+S    + L+     + K          G+
Sbjct: 7   WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66

Query: 56  SLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
           + F             +LV+ Y  +   L   L+  C++
Sbjct: 67  TFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLKHHCIR 105

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 2e-21
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          ++FG I R EAE  L+      G +L+R S +    ++LS                    
Sbjct: 7  FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 66

Query: 61 QKAGRTTIH-YPELVEHYSKDADGLCVNLRKPC 92
            AG  T     +L  ++S+++DGL   L+KP 
Sbjct: 67 AIAGGRTHASPADLCHYHSQESDGLVCLLKKPF 99

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 3e-21
 Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRSLFE 59
           +++G I R EAE+ L L     G FL+R        Y LS  +        +    +   
Sbjct: 8   FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 67

Query: 60  TQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
               G+      EL E YS+D DGL  NLRKPC +
Sbjct: 68  AIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNR 102

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 4e-21
 Identities = 27/95 (28%), Positives = 47/95 (49%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           W+ GKI R E+E+ +L+    +G FLIR  ++  +      ++      ++   ++   +
Sbjct: 31  WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 90

Query: 61  QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQV 95
              G+      +LVEHYS  ADGL   L  PC ++
Sbjct: 91  IPEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQKI 125

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 1e-20
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
          W+FG I R EA ++L    N  GAFLIR SE    DY LS         + +    G  L
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRL 63

Query: 58 FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
             +     ++  PELV ++   +    + L  PC +
Sbjct: 64 HLNEAVSFLSL--PELVNYHRAQSLSHGLRLAAPCRK 98

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 2e-20
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSF-----CLKMTTGR 55
           W+ G+I R E+++ +       G FL+R+S+     + LS                  GR
Sbjct: 12  WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 71

Query: 56  SLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVS 96
             F             +LVE +  +   L   LR  C +V+
Sbjct: 72  LYFSMDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCTRVA 112

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 3e-20
 Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC------LKMTTG 54
           WYFGK+ R +AE++LL   N  G FLIR+SE+ K  YSLS               K+   
Sbjct: 8   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 67

Query: 55  RSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKP 91
            +               +LV+HYS+ A GL   L  P
Sbjct: 68  DNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVP 104

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.2 bits (192), Expect = 6e-20
 Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
           +Y G + + E E  LLL     G FLIRDSES      L    +         +   G  
Sbjct: 5   YYHGCLTKRECEA-LLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYY 63

Query: 57  LFETQKAGRTTIH--YPELVEHYSKDADGLCVNLRKPC 92
             ET      TI     ELV  Y K   GL V+L  P 
Sbjct: 64  RIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLSNPI 101

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.4 bits (190), Expect = 1e-19
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRSLFE 59
          WY G + R  AE   LL    +G+FL+R+SES     S+S  Y+   +  ++ T      
Sbjct: 7  WYHGPVSRNAAEY--LLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 64

Query: 60 TQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
             +        ELV H+S  ADGL   L  P  +
Sbjct: 65 YVSSESRFNTLAELVHHHSTVADGLITTLHYPAPK 99

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 2e-19
 Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRS 56
            Y GKI R   EK LLL     G++L+RDSES    Y L              +  TG  
Sbjct: 6   VYHGKISRETGEK-LLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSW 64

Query: 57  LFETQKA--GRTTIHYPELVEHYSKDADGLCVNLRKPC 92
             ET      R       L+  + K   G+ + L+ P 
Sbjct: 65  SAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPV 102

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (190), Expect = 2e-19
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           WY   + R EAE+KL       G FL+R  + +   Y+LS     +   + +        
Sbjct: 31  WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQ-GTYALSLIYGKTVYHYLISQDKAGKY 89

Query: 58  FETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
              +     T+   +LVE+    ADGL   L++ C
Sbjct: 90  CIPEGTKFDTL--WQLVEYLKLKADGLIYCLKEAC 122

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 3e-18
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+ GKI R +AE+ L  PE   G FL+R+S +   DY+L                +   +
Sbjct: 6  WFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLS 63

Query: 61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
                  +  +LVEHY+ DADGLC  L KP V 
Sbjct: 64 IDEEVYFENLMQLVEHYTTDADGLCTRLIKPKVM 97

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 7e-18
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
          W+ GKI   EA ++L  PE+  G FL+R+S     DY L               R    T
Sbjct: 6  WFHGKISGQEAVQQLQPPED--GLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLT 63

Query: 61 QKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                  +  ++VEHYSKD   +C  L +P 
Sbjct: 64 IDEAVFFCNLMDMVEHYSKDKGAICTKLVRPK 95

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.8 bits (178), Expect = 9e-18
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 11/101 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
           WY   I R +AEK LLL     GAF++RDS +    Y++S       S    +       
Sbjct: 8   WYNKSISRDKAEK-LLLDTGKEGAFMVRDSRTP-GTYTVSVFTKAIISENPCIKHYHIKE 65

Query: 59  ETQKAGRTTI-------HYPELVEHYSKDADGLCVNLRKPC 92
                 R  +         P L++++  +  GL   LR P 
Sbjct: 66  TNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVTRLRYPV 106

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 2e-17
 Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 11/100 (11%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
           W+   I  +EAE  LLL     G+FL R S+S   D +LS       +      TG    
Sbjct: 5   WFHPNITGVEAEN-LLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYD 63

Query: 59  ETQKAGRTTIHYPELVEHYS------KDADGLCVNLRKPC 92
                   T+   ELV++Y       K+ +G  + L+ P 
Sbjct: 64  LYGGEKFATL--AELVQYYMEHHGQLKEKNGDVIELKYPL 101

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 4e-17
 Identities = 39/64 (60%), Positives = 46/64 (71%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
           GM N EVL QVE GYRMPCPP CP  L+D+M +CW K+P +RPTFE LQ  LED+FT   
Sbjct: 217 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276

Query: 181 SDYK 184
             Y+
Sbjct: 277 PQYQ 280

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 2e-16
 Identities = 31/58 (53%), Positives = 37/58 (63%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT 177
            GMTN EV+  +E GYRM  P  CP  LY +M  CW + P  RPTF+ L+  LEDFFT
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 1e-15
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 15/106 (14%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--------EYKRSSFCLKMT 52
           W+ G +   EAEK LL  +  HG+FL+R+S+S   D+ LS        E       +   
Sbjct: 2   WFHGHLSGKEAEK-LLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHV 60

Query: 53  TGRSLFETQKAGRTTIHY--PELVEHYSKD----ADGLCVNLRKPC 92
             R        G         +LVEHY K+      G  + L++P 
Sbjct: 61  MIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPL 106

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 2e-15
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
           GM  +EV   +E G RM CP GCP  +YD+M  CW  D   RP F  ++ +L +++
Sbjct: 213 GMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 3e-15
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
            M   EV+  +E G RM CPP CPP LY +M +CW+     RP F T++ ++   +
Sbjct: 215 KMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.7 bits (157), Expect = 9e-15
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 3/94 (3%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
           WY   + R +AE  +L+     GAFL+R      +       +      ++         
Sbjct: 11  WYHASLTRAQAEH-MLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVML 69

Query: 61  QKAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQ 94
             +   ++   +L+ +Y K      + LR P  +
Sbjct: 70  GNSEFDSL--VDLISYYEKHPLYRKMKLRYPINE 101

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
             +   +V+ +VE GY+M  P GCPP +Y++M  CW  D   RP+F  L+ +LE   T E
Sbjct: 202 PRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 261

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 4e-14
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTT---GRSL 57
           W+ G I R +AE   LL     G+FLIR S S        + + S     +     G  +
Sbjct: 11  WFHGAISREDAEN--LLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFM 68

Query: 58  FETQKAGRTTIHYPELVEHYSKDA-DGLCVNLRKPCVQ 94
              +K   T++    LV  + +   +     L +PC Q
Sbjct: 69  IPGEKVAHTSL--DALVTFHQQKPIEPRRELLTQPCRQ 104

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 4e-14
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRSLFE 59
           W+ GK+ R EAE  L      +G FL+R+S +    Y L+         L +     +  
Sbjct: 9   WFHGKLSRREAEALL----QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVR 64

Query: 60  TQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPC 92
           T+     ++    L+ ++  +       G  + L++P 
Sbjct: 65  TKDHRFESV--SHLISYHMDNHLPIISAGSELCLQQPV 100

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 2e-13
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
           G+  +E+   +E G R+P PP C   +Y IM++CW+ D   RP F  L  +    
Sbjct: 216 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 2e-13
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
             TN+E    +  G R+  P     ++Y IM  CW +   +RPTF+ L   + D
Sbjct: 204 RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 257

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.0 bits (155), Expect = 3e-13
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF 176
            G+  ++V   +E  YRM  P GCP ++Y++M  CW  +P  RP+F  +    E  F
Sbjct: 218 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 274

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (146), Expect = 3e-13
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
          W+FGKI R +AE+ +L  +   GAFLIR+SES   D+SLS            +  G   +
Sbjct: 5  WFFGKIPRAKAEE-MLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKY 63

Query: 59 ETQKAGRTTIHYPELVEHYSK 79
                  ++   ELV+++  
Sbjct: 64 FLWVVKFNSL--NELVDYHRS 82

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.4 bits (146), Expect = 4e-13
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 12/100 (12%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESR-KNDYSLSEYKRSSFC--LKMTTGRSL 57
           WY+G I R E  +   L +   G FL+RD+ ++   DY+L+  K  +             
Sbjct: 13  WYWGDISREEVNE--KLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKY 70

Query: 58  FETQKAGRTTIHYPELVEHYSKDA-----DGLCVNLRKPC 92
             +      ++   EL+ HY  ++       L V L  P 
Sbjct: 71  GFSDPLTFNSV--VELINHYRNESLAQYNPKLDVKLLYPV 108

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 8e-13
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS---EYKRSSFCLKMTTGRSL 57
            Y+G + +  AE   LL     G FL+RDS      +S+S     +     ++       
Sbjct: 13  CYWGVMDKYAAEA--LLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFS 70

Query: 58  FETQKAGRTTIH-YPELVEHYSKDADGLCVN--LRKPCVQ 94
           F+              L+EHY   +  +     L  P ++
Sbjct: 71  FDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIR 110

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.9 bits (152), Expect = 8e-13
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           GM + EV++ V  G  + CP  CP  LY++M  CW K P  RP+F ++   L+
Sbjct: 245 GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.5 bits (151), Expect = 1e-12
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            MTN +V++ +E  YR+P P  CP  L+ +ML+CW KD   RP F  +   L+  
Sbjct: 236 DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 1e-12
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME 179
           G+ N +V+ ++E+G R+P PP CPP LY +M +CW  DP +RP F  L+ +L      E
Sbjct: 212 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 270

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 1e-12
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF-TM 178
             +   ++   +  G R+  P  CP  LY++ML+CW      RP+F  L  ++   F T 
Sbjct: 236 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295

Query: 179 EGSDY 183
            G  Y
Sbjct: 296 IGEHY 300

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 2e-12
 Identities = 27/109 (24%), Positives = 37/109 (33%), Gaps = 20/109 (18%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-----------------EYK 43
           WY+G++ R EA    LL    HG FL+RDS +   DY LS                    
Sbjct: 2   WYWGRLSRQEAVA--LLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPP 59

Query: 44  RSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
                 +   G S    +   +     P L+E Y          L +P 
Sbjct: 60  VPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIH-YLDTTTLIEPV 107

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.6 bits (139), Expect = 4e-12
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 6/81 (7%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSLF 58
          W+   + R +AE   LL   D G F+IR S+S   D+S+S            M   +  +
Sbjct: 8  WFHEGLSRHQAEN--LLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNY 65

Query: 59 ETQKAGRTTIHYPELVEHYSK 79
                  ++   +LV++Y  
Sbjct: 66 FLWTEKFPSL--NKLVDYYRT 84

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 6e-12
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM 178
           G+   E+   ++ G+RM  P  C   LY +M +CW   P +RPTF+ L   L+    +
Sbjct: 240 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 6e-12
 Identities = 17/56 (30%), Positives = 32/56 (57%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
             ++N EV+  +  G+R+P P  CP  +Y +M++CW ++  +RP F  +   L+  
Sbjct: 215 WELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           GMT AE+  ++  GYR+  P  C   +YD+M +CW + P +RP+F  +   L 
Sbjct: 229 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.6 bits (136), Expect = 1e-11
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS-EYKRSSFCLKMTTGRSLFE 59
           W  G   R +AE   LL     G FL+R+S S++  Y+ S           +    + + 
Sbjct: 11  WNVGSSNRNKAEN--LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYG 67

Query: 60  TQKAGRTTIHYPELVEHYSK-----DADGLCVNLRKPC 92
             +         ELV HY         D L V L  P 
Sbjct: 68  FAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPV 105

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 121 GMTNAEVLHQVEH-GYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
           G+  +++LH+++  G R+P P  CP  +Y++M++CW   P  RPTF  L+  L +
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 120 GGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED 174
              +N+EV+  +  G+R+  P      +Y IM  CW + P  RP F  L  +L +
Sbjct: 204 ENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 2e-11
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTF----ETLQWKLEDFF 176
           G++N +VL  V  G  +  P  CP  L+++M  CW  +P  RP+F     +++ ++E  F
Sbjct: 238 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

Query: 177 TMEGSDYKE 185
                 Y E
Sbjct: 298 REVSFYYSE 306

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.0 bits (132), Expect = 4e-11
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 1  WYFGKIKRIEAEKKLLL-PENDHGAFLIRDSESRKNDYSLS--EYKRSSFCLKMTTGRSL 57
          W+ G + R++A + +L      HG F+IR SE+R  +  L+     ++        G   
Sbjct: 7  WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQ 66

Query: 58 FETQKAGRTTIHYPELVEHY 77
             Q     ++   +++ H+
Sbjct: 67 CHVQHLWFQSV--FDMLRHF 84

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 1e-10
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDF 175
            G   + E   +++ G RM  P    P +Y  ML+CW  +P +RPTF  L   L + 
Sbjct: 238 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 4e-10
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G   +A     +++G++M  P      +Y IM  CW  D  KRP+F  L   L 
Sbjct: 268 PGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 8e-10
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 119 SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            G   +++    ++ G+RM  P   P  +YDIM  CW  DP+KRPTF+ +   +E
Sbjct: 249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLS 40
            +G + R E      L   D G F+IR SE     + ++
Sbjct: 11 IIYGYMGRQEVND--ALQNQDPGTFIIRFSERNPGQFGIA 48

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 2e-09
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSS---FCLKMTTGRSL 57
           WY+G +   EA++   L E   G FLIRDS       ++S    +      ++   G+  
Sbjct: 17  WYWGSMTVNEAKE--KLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFR 74

Query: 58  FETQKAGRTTIHY----PELVEHYSK 79
            ++    ++ +        L+++Y +
Sbjct: 75  LDSIICVKSKLKQFDSVVHLIDYYVQ 100

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 11/92 (11%)

Query: 1   WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET 60
            + G I R +A++ L       GA+++R+S+ +   Y+L+        L+       +  
Sbjct: 37  EFHGIISREQADELL---GGVEGAYILRESQRQPGCYTLA--------LRFGNQTLNYRL 85

Query: 61  QKAGRTTIHYPELVEHYSKDADGLCVNLRKPC 92
              G+  +        +    DGL     +  
Sbjct: 86  FHDGKHFVGEKRFESIHDLVTDGLITLYIETK 117

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 7e-09
 Identities = 8/48 (16%), Positives = 16/48 (33%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
             +  E+  ++  G     P      L +I+          RP+ E +
Sbjct: 216 AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 263

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (121), Expect = 1e-08
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 121 GMTNAEVLHQ-VEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
            + N + +   V  GY  P        CP  +  +M EC  K   +RP F  +   +E
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 6/94 (6%)

Query: 1  WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKN-DYSLSEYKRSSFCLKMTTGRSLFE 59
          +  G I +       +L     G FL+R SES K    + +  ++             + 
Sbjct: 9  YIMGFISKERERA--ILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYT 66

Query: 60 TQKAGRTTIHYPELVEHYSKDADGLCVNLRKPCV 93
           Q+     + + E++  Y K  D   + +     
Sbjct: 67 KQQ--LNNMSFAEIIMGY-KIMDATNILVSPLVY 97

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.5 bits (117), Expect = 4e-08
 Identities = 8/46 (17%), Positives = 14/46 (30%)

Query: 138 PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDY 183
               G P      +  C       +P +  L+    + F  +G  Y
Sbjct: 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 284

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 46.7 bits (110), Expect = 4e-07
 Identities = 11/72 (15%), Positives = 18/72 (25%), Gaps = 4/72 (5%)

Query: 118 GSGGMTNAEVLHQVEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE 173
           G    TN +   ++    +         G P   Y  M           P ++ LQ    
Sbjct: 215 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274

Query: 174 DFFTMEGSDYKE 185
                  +   E
Sbjct: 275 KVLERLNTTEDE 286

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 9e-07
 Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 5/55 (9%)

Query: 131 VEHGYRMPCP-----PGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEG 180
            E   R   P           +  IM ECW  +   R T   ++  L      EG
Sbjct: 246 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 6/64 (9%)

Query: 121 GMTNAEVLHQVEHG--YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED-FFT 177
            +    VL ++       +  P        D + +C  K+   R T   L   L+  F T
Sbjct: 217 ELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL---LQHPFVT 273

Query: 178 MEGS 181
           ++ +
Sbjct: 274 VDSN 277

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 1/49 (2%)

Query: 121 GMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
            M     L+ + ++               + +  C  K P  RPT E L
Sbjct: 216 NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 4e-06
 Identities = 8/50 (16%), Positives = 14/50 (28%), Gaps = 2/50 (4%)

Query: 121 GMTNAEVLHQVEHG--YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
                  L+ +       +  P        D +  C   D  KR + + L
Sbjct: 218 NENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (101), Expect = 5e-06
 Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 1/48 (2%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
             T  E   ++        P        D++      +P +RP    +
Sbjct: 206 ANTYQETYKRISRV-EFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 252

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 119 SGGMTNAEVLHQVEHGYRMP-CPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           S     A++  +V  G +         P + +I+  C  ++  +R + + L
Sbjct: 213 SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 263

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE 166
           G    E+ H +        P        D++++ ++++P KR    
Sbjct: 205 GQDEEELFHSIRMD-NPFYPRWLEKEAKDLLVKLFVREPEKRLGVR 249

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 3/51 (5%)

Query: 121 GMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G  + E L  V+     +         P   D +     K+P KR T    
Sbjct: 230 GEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 41.2 bits (96), Expect = 3e-05
 Identities = 12/52 (23%), Positives = 16/52 (30%), Gaps = 3/52 (5%)

Query: 120 GGMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           GG  + E L  V+            G      D + +  L DP  R T    
Sbjct: 226 GGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 277

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 4e-05
 Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 3/51 (5%)

Query: 121 GMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           G T  E L  V      +             D +    +KDP KR T +  
Sbjct: 218 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 3/51 (5%)

Query: 121 GMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
              +A++  Q+      +  P          D +     KDP KR T E  
Sbjct: 211 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 6/51 (11%), Positives = 15/51 (29%), Gaps = 3/51 (5%)

Query: 121 GMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
             TN +++  + +    +             D +    +K+   R T    
Sbjct: 205 AETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 7e-05
 Identities = 5/52 (9%), Positives = 15/52 (28%)

Query: 117 FGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           +     +  E     E    +            ++ +  +++P  R T   +
Sbjct: 206 WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 257

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 9e-05
 Identities = 7/49 (14%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQ 169
                 +  ++        P    P+  D++ +  + D  KR   E ++
Sbjct: 212 AGNEYLIFQKIIKL-EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 259

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 3/47 (6%)

Query: 121 GMTNAEVLHQVEHGYRMP---CPPGCPPRLYDIMLECWLKDPVKRPT 164
           G +   V +Q      +P      G    L  ++L+   K+P  R  
Sbjct: 216 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ 262

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 3/51 (5%)

Query: 121 GMTNAEVLHQVEHG---YRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
                 +L  +  G   +  P        + D++    +  P KR T E  
Sbjct: 217 HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 5/44 (11%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
                +   ++ +   +  PP     + D++     +D  +R  
Sbjct: 203 DSNTMKTYEKILNA-ELRFPPFFNEDVKDLLSRLITRDLSQRLG 245

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 6/44 (13%), Positives = 13/44 (29%), Gaps = 1/44 (2%)

Query: 121 GMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
              +  +   +     +  P    P    ++     KDP +R  
Sbjct: 207 NQDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.4 bits (86), Expect = 6e-04
 Identities = 6/48 (12%), Positives = 15/48 (31%)

Query: 117 FGSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
           F      +   + ++     +  P    P L  ++     +D  +R  
Sbjct: 206 FRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLG 253

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 8e-04
 Identities = 7/33 (21%), Positives = 12/33 (36%)

Query: 136 RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           ++            ++  C    P  RPTFE +
Sbjct: 220 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 4/31 (12%), Positives = 9/31 (29%)

Query: 138 PCPPGCPPRLYDIMLECWLKDPVKRPTFETL 168
           P        +  ++      +P +R T    
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.004
 Identities = 9/47 (19%), Positives = 15/47 (31%)

Query: 118 GSGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT 164
             G   +   + +       P P        D++    +KDP KR  
Sbjct: 234 VDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 280

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.93
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.92
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.91
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.91
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.91
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.91
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.9
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.9
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.9
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.9
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.9
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.89
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.89
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.88
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.87
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.86
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.85
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.83
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.83
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.82
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.82
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.82
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.82
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.82
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.82
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.81
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.8
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.8
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.8
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.8
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.8
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.79
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.79
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.78
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.78
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.78
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.78
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.77
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.77
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.76
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.75
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.75
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.74
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.74
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.73
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.73
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.73
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.72
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.72
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.72
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.71
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.71
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.7
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.7
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.69
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.69
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.69
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.69
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.68
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.67
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.67
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.66
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.66
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.66
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.65
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.65
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.64
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.62
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.62
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.61
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.58
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.56
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.55
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.54
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.54
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.54
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.45
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.44
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.43
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.43
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.42
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.37
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.32
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.31
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.27
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.22
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.11
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.09
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	98.86
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.71
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	95.32
d3buxb3	88	Cbl {Human (Homo sapiens) [TaxId: 9606]}	81.19

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=5.9e-28  Score=179.54  Aligned_cols=155  Identities=21%  Similarity=0.288  Sum_probs=127.3

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a   81 (189)
                      +..++|+|++++++.+...+..+||+|++++ |    ++..                 ++.. ...++..++..+..+++
T Consensus        81 l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~-g----~L~~-----------------~~~~~~~~l~~~~~~~i~~qia  138 (299)
T d1jpaa_          81 MGQFDHPNVIHLEGVVTKSTPVMIITEFMEN-G----SLDS-----------------FLRQNDGQFTVIQLVGMLRGIA  138 (299)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTT-E----EHHH-----------------HHHTTTTCSCHHHHHHHHHHHH
T ss_pred             HHhCCCCCCccEEEEEeeCCEEEEEEEecCC-C----ccee-----------------eeccccCCCCHHHHHHHHHHHH
Confidence            4578999999999999888889999999987 3    1211                 2222 23456777888899999


Q ss_pred             CCceeeccCCcccccc-cc---------------ccccc--------------------------C-CCCCccc-e-EEE
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHG--------------------------T-NLSGVVV-S-AVD  116 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~--------------------------~-~~~~~~~-s-Vws  116 (189)
                      .|+.|+|..+++|||+ |+               |+++.                          . ..+.|+. + |||
T Consensus       139 ~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS  218 (299)
T d1jpaa_         139 AGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS  218 (299)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHH
T ss_pred             HHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCccccccc
Confidence            9999999999999996 55               33321                          1 4567899 9 999


Q ss_pred             ec-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         117 FG-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       117 fG-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                      ||             |.+.+..+++..+.++.+++.|..||+++.+||.+||+.||++||||++|++.|+.+++.+
T Consensus       219 ~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p  294 (299)
T d1jpaa_         219 YGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP  294 (299)
T ss_dssp             HHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             chHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence            99             6777888999999999999999999999999999999999999999999999999998753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.5e-28  Score=175.44  Aligned_cols=153  Identities=17%  Similarity=0.208  Sum_probs=125.8

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+..++..+||+|+++++.     +..                 ++.. ...+....++.+..+++.
T Consensus        55 ~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~i~~qia~  112 (263)
T d1sm2a_          55 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC-----LSD-----------------YLRTQRGLFAAETLLGMCLDVCE  112 (263)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHH-----------------HHHTTTTCCCHHHHHHHHHHHHH
T ss_pred             HhcCCCCcccccceeccCCceEEEEEecCCCc-----HHH-----------------HhhccccCCCHHHHHHHHHHHHH
Confidence            46789999999999988888999999998732     222                 2222 233446777888999999


Q ss_pred             CceeeccCCcccccc-cc---------------ccc----------------------ccC-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLV----------------------HGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~----------------------~~~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|||+ |+               |++                      ||. ..+.|+. + |||||   
T Consensus       113 gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil  192 (263)
T d1sm2a_         113 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM  192 (263)
T ss_dssp             HHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             HHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHH
Confidence            999999999999996 55               222                      222 5577999 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                |.+.+..++...+.+|.+++.|..||+++.+||.+||+.||++||||++|++.|+++.++
T Consensus       193 ~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         193 WEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence                      566677889999999999999999999999999999999999999999999999998764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-27  Score=176.21  Aligned_cols=151  Identities=23%  Similarity=0.364  Sum_probs=124.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+. .++.+||+|++++ |    ++..                 ++.....++...++.+..+++.|
T Consensus        63 ~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~-g----~L~~-----------------~l~~~~~l~~~~~~~i~~qi~~g  119 (277)
T d1xbba_          63 QQLDNPYIVRMIGICE-AESWMLVMEMAEL-G----PLNK-----------------YLQQNRHVKDKNIIELVHQVSMG  119 (277)
T ss_dssp             HTCCCTTBCCEEEEEE-SSSEEEEEECCTT-E----EHHH-----------------HHHHCTTCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCceEEEEec-cCCEEEEEEcCCC-C----cHHH-----------------HHhhccCCCHHHHHHHHHHHHHH
Confidence            4688999999999874 4567999999887 3    1222                 33334456677888899999999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc------------------------cC-CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH------------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~------------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      +.++|..+++|||+ |+               |+++                        |. ..+.|+. + |||||  
T Consensus       120 l~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~  199 (277)
T d1xbba_         120 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL  199 (277)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             HhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhh
Confidence            99999999999996 55               3333                        21 4566899 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                 |.+.+..++...+.+|.+++.|..||+++++||.+||+.||++||||++|.+.|+.++.
T Consensus       200 l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         200 MWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             hhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence                       77888889999999999999999999999999999999999999999999999987764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.7e-27  Score=172.98  Aligned_cols=152  Identities=23%  Similarity=0.378  Sum_probs=123.5

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++++. .++.|||+|++++ |    ++..                 ++.. +..++...+..+..+++.
T Consensus        64 ~~l~HpnIv~l~g~~~-~~~~~lvmE~~~~-g----~L~~-----------------~l~~~~~~l~~~~~~~i~~qi~~  120 (285)
T d1u59a_          64 HQLDNPYIVRLIGVCQ-AEALMLVMEMAGG-G----PLHK-----------------FLVGKREEIPVSNVAELLHQVSM  120 (285)
T ss_dssp             HHCCCTTBCCEEEEEE-SSSEEEEEECCTT-E----EHHH-----------------HHTTCTTTSCHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeeEeeeec-cCeEEEEEEeCCC-C----cHHH-----------------HhhccccCCCHHHHHHHHHHHHH
Confidence            3578999999999875 4578999999987 3    1222                 2222 334667778888999999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC-------------------------CCCCccc-e-EEEec-
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~~~~~~~-s-VwsfG-  118 (189)
                      |+.++|..+++|||+ |+               |+++..                         ..+.|+. + ||||| 
T Consensus       121 gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv  200 (285)
T d1u59a_         121 GMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV  200 (285)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHH
T ss_pred             HHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchH
Confidence            999999999999996 55               333221                         3466899 9 99999 


Q ss_pred             ------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                  |.+.+..++...+.+|.+++.|+.||+++++||.+||+.||++||||.+|.+.|+.++.+
T Consensus       201 ~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                        777788899999999999999999999999999999999999999999999999877653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.4e-27  Score=171.79  Aligned_cols=155  Identities=19%  Similarity=0.328  Sum_probs=125.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+...+..++|.|++..+.     +..     .           .......+...+++.+..+++.|
T Consensus        64 ~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~-----l~~-----~-----------~~~~~~~~~~~~~~~i~~~i~~g  122 (283)
T d1mqba_          64 GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-----LDK-----F-----------LREKDGEFSVLQLVGMLRGIAAG  122 (283)
T ss_dssp             HTCCCTTBCCEEEEECSSSSEEEEEECCTTEE-----HHH-----H-----------HHHTTTCSCHHHHHHHHHHHHHH
T ss_pred             HhcCCCCEeeeeEEEecCCceEEEEEecccCc-----chh-----h-----------hhcccccccHHHHHHHHHHHHHh
Confidence            46789999999998887788899999887622     111     0           11123345577888899999999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc------------------------cC-CCCCccc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH------------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~------------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      +.++|..+++|||+ |+               |+++                        |. ..+.|+. + |||||  
T Consensus       123 l~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvi  202 (283)
T d1mqba_         123 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV  202 (283)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             hhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHH
Confidence            99999999999996 55               3332                        21 4567899 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                 +.+.+..++...+..|.+++.|..+|.++.+||.+||+.||++||||.+|++.|+.+++.+
T Consensus       203 l~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         203 MWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence                       5666788899999999999999999999999999999999999999999999999998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-26  Score=170.14  Aligned_cols=153  Identities=26%  Similarity=0.448  Sum_probs=123.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+. +++.+||+|+++++.     +..                 ++..  ...++..+++.+..+++
T Consensus        63 ~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~-----L~~-----------------~~~~~~~~~l~~~~~~~i~~qi~  119 (272)
T d1qpca_          63 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGS-----LVD-----------------FLKTPSGIKLTINKLLDMAAQIA  119 (272)
T ss_dssp             HHCCCTTBCCEEEEEC-SSSCEEEEECCTTCB-----HHH-----------------HTTSHHHHTCCHHHHHHHHHHHH
T ss_pred             HhCCCCCEeEEEeeec-cCCeEEEEEeCCCCc-----HHH-----------------HHhhcCCCCCCHHHHHHHHHHHH
Confidence            4578999999999775 466899999998733     111                 1111  12345777888899999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..+++|||+ |+               |+|+..                       ..+.|+. + |||||  
T Consensus       120 ~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvv  199 (272)
T d1qpca_         120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL  199 (272)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHH
T ss_pred             HHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHH
Confidence            9999999999999996 55               333211                       4467899 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                 +.+.+..+++..+..|.+++.|..+|+++.+||.+||+.||++||||++|++.|+.+++++
T Consensus       200 l~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ftst  271 (272)
T d1qpca_         200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (272)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhcC
Confidence                       5666778899999999999999999999999999999999999999999999999999865

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.8e-27  Score=171.10  Aligned_cols=150  Identities=19%  Similarity=0.233  Sum_probs=121.7

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a   81 (189)
                      +..++|+|++++++.+..+.+.++|+|++.++.     +..                 ++. ....+....+..+..+.+
T Consensus        53 ~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~-----l~~-----------------~~~~~~~~~~~~~~~~i~~qi~  110 (258)
T d1k2pa_          53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC-----LLN-----------------YLREMRHRFQTQQLLEMCKDVC  110 (258)
T ss_dssp             HHTCCCTTBCCEEEEECCSSSEEEEEECCTTEE-----HHH-----------------HHHSGGGCCCHHHHHHHHHHHH
T ss_pred             HHhcCCCceeeEEEEEeeCCceEEEEEccCCCc-----HHH-----------------hhhccccCCcHHHHHHHHHHHH
Confidence            356899999999999888888999999998732     111                 111 122344666777888999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccc----------------------cC-CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVH----------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~----------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..+++|+|+ |.               |+++                      |. ....|+. + |||||  
T Consensus       111 ~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~  190 (258)
T d1k2pa_         111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL  190 (258)
T ss_dssp             HHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchh
Confidence            9999999999999996 44               3332                      22 4567899 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                                 |.+.+..++...+.+|.+++.|..+|+++.+||.+||+.||++||||++|++.|.+
T Consensus       191 l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         191 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             hHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence                       77888899999999999999999999999999999999999999999999998854

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=6.2e-26  Score=167.62  Aligned_cols=153  Identities=21%  Similarity=0.349  Sum_probs=124.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+...+..+||+|+++++.     +..                 ++..  ...++...++.+..+++
T Consensus        68 ~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~-----l~~-----------------~l~~~~~~~~~~~~~~~i~~qi~  125 (287)
T d1opja_          68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGN-----LLD-----------------YLRECNRQEVSAVVLLYMATQIS  125 (287)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTCB-----HHH-----------------HHHHSCTTTSCHHHHHHHHHHHH
T ss_pred             HhCCCCCEecCCccEeeCCeeEEEeecccCcc-----hHH-----------------HhhhccccchHHHHHHHHHHHHH
Confidence            45789999999999888888999999998733     111                 1211  22344667788888999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccc----------------------cC-CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVH----------------------GT-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~----------------------~~-~~~~~~~-s-VwsfG--  118 (189)
                      .|+.|+|..+++|||+ |+               |+|+                      |. ..+.|+. + |||||  
T Consensus       126 ~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~  205 (287)
T d1opja_         126 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL  205 (287)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHH
Confidence            9999999999999996 55               3332                      21 5677999 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                 +.+.+..++...+..+.+++.|..+|+++.+||.+||+.||++||||++|++.|+.+++.
T Consensus       206 l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         206 LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             HHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                       566777888888889999999999999999999999999999999999999999988753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5e-26  Score=169.81  Aligned_cols=166  Identities=23%  Similarity=0.330  Sum_probs=126.6

Q ss_pred             CCC-ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC---ccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKI-KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET---QKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l-~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g---yl~~~~~~~l~~li~~~~~   79 (189)
                      ..+ +|+|++++++.+...+..+||+|++++++...+ +..  ....      .....   .......++......+..+
T Consensus        65 ~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~-l~~--~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~q  135 (309)
T d1fvra_          65 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF-LRK--SRVL------ETDPAFAIANSTASTLSSQQLLHFAAD  135 (309)
T ss_dssp             TTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHH-HHT--TCHH------HHCHHHHHHTTBSCSSCHHHHHHHHHH
T ss_pred             HhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHH-Hhh--cccc------ccchhhhccccccCCCCHHHHHHHHHH
Confidence            355 699999999998888889999999987431111 111  0000      00000   0111234556778888999


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccccC---------------------CCCCccc-e-EEEec--
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVHGT---------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~---------------------~~~~~~~-s-VwsfG--  118 (189)
                      ++.|+.++|..+++|||+ |+               |+++..                     ..+.|+. + |||||  
T Consensus       136 ia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvi  215 (309)
T d1fvra_         136 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  215 (309)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             HHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHH
Confidence            999999999999999996 55               333211                     4567899 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                                 |.+.+..++...+.+|.+++.|..+|+++.+||.+||+.||++||||++|++.|+.+++.
T Consensus       216 l~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         216 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                       677788899999999999999999999999999999999999999999999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-25  Score=165.95  Aligned_cols=162  Identities=33%  Similarity=0.554  Sum_probs=132.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC--CCCcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG--RTTIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~--~~~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+. ++..|||+|++.++. +    ..                 ++..  ...++..+++.+..+++
T Consensus        67 ~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~-l----~~-----------------~~~~~~~~~l~~~~~~~i~~~i~  123 (285)
T d1fmka3          67 KKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS-L----LD-----------------FLKGETGKYLRLPQLVDMAAQIA  123 (285)
T ss_dssp             HHCCCTTBCCEEEEEC-SSSCEEEECCCTTCB-H----HH-----------------HHSHHHHTTCCHHHHHHHHHHHH
T ss_pred             HhcccCCEeEEEEEEe-cCCeEEEEEecCCCc-h----hh-----------------hhhhcccccchHHHHHHHHHHHH
Confidence            3578999999999874 567899999998732 1    11                 1111  22355778888999999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..+++|+|+ |+               |+++..                       ..+.++. + |||||  
T Consensus       124 ~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Gii  203 (285)
T d1fmka3         124 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  203 (285)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHH
Confidence            9999999999999996 55               333321                       4567899 9 99999  


Q ss_pred             -----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCC
Q psy1684         119 -----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSDYKEAS  187 (189)
Q Consensus       119 -----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~~  187 (189)
                                 +.+.+..+++..+.++.+++.|..||+++.+||.+||+.||++||||++|++.|+.+++...|.|.+.+
T Consensus       204 l~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p~~  283 (285)
T d1fmka3         204 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE  283 (285)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCSC
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCCCC
Confidence                       556677888999999999999999999999999999999999999999999999999999999999877


Q ss_pred             C
Q psy1684         188 G  188 (189)
Q Consensus       188 ~  188 (189)
                      +
T Consensus       284 ~  284 (285)
T d1fmka3         284 N  284 (285)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-26  Score=167.73  Aligned_cols=153  Identities=24%  Similarity=0.384  Sum_probs=122.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCcc-CCCCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQK-AGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl-~~~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+. ++..|||+|+++.+.     +..                 ++ .....++..++..+..+++.
T Consensus        63 ~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~-----l~~-----------------~~~~~~~~l~~~~~~~~~~qi~~  119 (273)
T d1mp8a_          63 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGE-----LRS-----------------FLQVRKYSLDLASLILYAYQLST  119 (273)
T ss_dssp             HTCCCTTBCCEEEEEC-SSSCEEEEECCTTEE-----HHH-----------------HHHHTTTTSCHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeeEEEEEe-cCeEEEEEEeccCCc-----HHh-----------------hhhccCCCCCHHHHHHHHHHHHH
Confidence            4688999999999875 466899999988632     111                 11 11234557788888999999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|||+ |+               |+|+..                       ..+.|+. + |||||   
T Consensus       120 gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil  199 (273)
T d1mp8a_         120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM  199 (273)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred             HhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHH
Confidence            999999999999996 55               333221                       4567899 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                                |.+.+..++...+.+|.+++.|+.+|+++.+||.+||+.||++||||.+|++.|+.+++..
T Consensus       200 ~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         200 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             HHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence                      6667788899999999999999999999999999999999999999999999999998753

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.9e-26  Score=167.30  Aligned_cols=154  Identities=21%  Similarity=0.345  Sum_probs=122.5

Q ss_pred             CCCCChHHHHHHhcCCCCC-CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC--CCcCHhHHHHHhhh
Q psy1684           3 FGKIKRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR--TTIHYPELVEHYSK   79 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~-~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~--~~~~l~~li~~~~~   79 (189)
                      +..++|+|++++++.+... +..+||+|+++++.     +..                 |+...  ..++...++.+..+
T Consensus        54 l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~-----L~~-----------------~l~~~~~~~l~~~~~~~i~~~  111 (262)
T d1byga_          54 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS-----LVD-----------------YLRSRGRSVLGGDCLLKFSLD  111 (262)
T ss_dssp             HTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE-----HHH-----------------HHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCC-----HHH-----------------HHHhcCCCCCCHHHHHHHHHH
Confidence            4678999999999977543 45789999998832     222                 22211  12446667788889


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cc------------------cccC-CCCCccc-e-EEEec----
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YL------------------VHGT-NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l------------------~~~~-~~~~~~~-s-VwsfG----  118 (189)
                      ++.|+.|+|+.+++|+|+ |.               ++                  |||. ..+.||. + |||||    
T Consensus       112 i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~  191 (262)
T d1byga_         112 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW  191 (262)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHH
Confidence            999999999999999996 54               22                  2221 4567999 9 99999    


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                               |.+.+..++...+.+|.+++.|..+|+++++|+.+||+.||++||||++|++.|+++.+.
T Consensus       192 el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         192 EIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             HHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence                     566677889999999999999999999999999999999999999999999999988653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=4.5e-26  Score=169.49  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=124.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCe----eeEEEEEeccCCccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFC----LKMTTGRSLFETQKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~----v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+......++|+|++.+++...+ +... ...    ..+................++..+.+.+..+
T Consensus        71 ~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~-l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  148 (301)
T d1lufa_          71 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF-LRSM-SPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ  148 (301)
T ss_dssp             HTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH-HHHT-CC----------------------CCCCHHHHHHHHHH
T ss_pred             HhcCCCCcccceeeeccCCceEEEEEecCCCcHHHH-HHhc-CccccccccccccchhhhccccCCCCCCHHHHHHHHHH
Confidence            467899999999999888899999999988432111 1110 000    0000000000001111233557778888999


Q ss_pred             ccCCceeeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEe
Q psy1684          80 DADGLCVNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDF  117 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-Vwsf  117 (189)
                      .+.|+.|+|..+++|||+ |+               |+|+                       |. ....||. + ||||
T Consensus       149 i~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~  228 (301)
T d1lufa_         149 VAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY  228 (301)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccc
Confidence            999999999999999996 55               3332                       11 4557899 9 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFF  176 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~  176 (189)
                      |             |.+.+..+++..+.+|.+++.|..+|+++++||.+||+.||++||||.||++.|++|+
T Consensus       229 Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         229 GVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9             6777888999999999999999999999999999999999999999999999999876

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9e-26  Score=167.71  Aligned_cols=167  Identities=21%  Similarity=0.243  Sum_probs=125.8

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCcee
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCV   86 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~   86 (189)
                      +|+|++++++.+..+...|+|+|++.++. +.-.++.. ...........    .-.....++...+..+..+.+.|+.|
T Consensus        77 ~HpnIv~~~~~~~~~~~~~~v~e~~~~g~-l~~~i~~~-~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~qi~~al~y  150 (299)
T d1fgka_          77 KHKNIINLLGACTQDGPLYVIVEYASKGN-LREYLQAR-RPPGLEYSYNP----SHNPEEQLSSKDLVSCAYQVARGMEY  150 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCB-HHHHHHTT-SCC----------------CCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEecccccccCCeEEEEEEccCCCc-HHHHHHhh-cCCcccccccc----ccCccccCCHHHHHHHHHHHHHHHHH
Confidence            69999999999988888999999999843 21111110 00000000000    01113345677788899999999999


Q ss_pred             eccCCcccccc-cc---------------c-----------------------ccccC-CCCCccc-e-EEEec------
Q psy1684          87 NLRKPCVQVSC-RI---------------Y-----------------------LVHGT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        87 ~~~~~~~~~~~-p~---------------~-----------------------l~~~~-~~~~~~~-s-VwsfG------  118 (189)
                      +|..+++|||+ |+               +                       +|+|. ..+.|+. + |||||      
T Consensus       151 lH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~el  230 (299)
T d1fgka_         151 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI  230 (299)
T ss_dssp             HHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHh
Confidence            99999999996 55               1                       11111 4578999 9 99999      


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                             |.+.+..++...+..|.+++.|..+|+++.+||.+||+.||++||||.||++.|+++++.+
T Consensus       231 l~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~~  298 (299)
T d1fgka_         231 FTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  298 (299)
T ss_dssp             HTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhcC
Confidence                   6778888898889999999999999999999999999999999999999999999998753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.5e-25  Score=167.32  Aligned_cols=157  Identities=17%  Similarity=0.230  Sum_probs=118.6

Q ss_pred             CCCChHHHHHHhcCCCCCC-CcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCC-CcCHhHHHHHhhhcc
Q psy1684           4 GKIKRIEAEKKLLLPENDH-GAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRT-TIHYPELVEHYSKDA   81 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~-g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~-~~~l~~li~~~~~~a   81 (189)
                      ..++|+|++++++.+...+ ..++|+|++.++.     +..                 ++.... ......++.+..+.+
T Consensus        83 ~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~-----l~~-----------------~~~~~~~~~~~~~~~~i~~qia  140 (311)
T d1r0pa_          83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD-----LRN-----------------FIRNETHNPTVKDLIGFGLQVA  140 (311)
T ss_dssp             HTCCCTTBCCCCEEEEETTTEEEEEEECCTTCB-----HHH-----------------HHHCTTCCCBHHHHHHHHHHHH
T ss_pred             HhCCCCCEeEEeEEEEecCCceEEEEEEeecCc-----hhh-----------------hhccccccchHHHHHHHHHHHH
Confidence            4688999999998875444 4688999988732     111                 222222 223667788889999


Q ss_pred             CCceeeccCCcccccc-cc---------------cccccC--------------------------CCCCccc-e-EEEe
Q psy1684          82 DGLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------------NLSGVVV-S-AVDF  117 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------------~~~~~~~-s-Vwsf  117 (189)
                      .|+.++|..+++|||+ |+               |+++..                          ..+.++. + ||||
T Consensus       141 ~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~Sf  220 (311)
T d1r0pa_         141 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF  220 (311)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred             HhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhh
Confidence            9999999999999996 54               443322                          4567899 9 9999


Q ss_pred             c-------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q psy1684         118 G-------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTMEGSD  182 (189)
Q Consensus       118 G-------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~~~  182 (189)
                      |             +.+.+..++...+.+|.+++.|..||+++++||.+||+.||++||||.||++.|++++++-..+
T Consensus       221 Givl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~  298 (311)
T d1r0pa_         221 GVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  298 (311)
T ss_dssp             HHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence            9             3344556777888899999999999999999999999999999999999999999999864443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.3e-26  Score=170.12  Aligned_cols=161  Identities=17%  Similarity=0.246  Sum_probs=125.1

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcCHhHHHHHhhhc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIHYPELVEHYSKD   80 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~l~~li~~~~~~   80 (189)
                      +..+.|+|++++++.+..+++.+||+|++.++....+....              ..+  ............++.+..+.
T Consensus        77 l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~i~~~i  142 (308)
T d1p4oa_          77 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--------------RPAMANNPVLAPPSLSKMIQMAGEI  142 (308)
T ss_dssp             GGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHH--------------HHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred             HHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhc--------------ccccccccccCCCCHHHHHHHHHHH
Confidence            34688999999999998888999999999984311110000              000  01111123367778888899


Q ss_pred             cCCceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec
Q psy1684          81 ADGLCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG  118 (189)
Q Consensus        81 a~gl~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG  118 (189)
                      +.|+.++|..+++|||+ |.               |+|+..                        ..+.++. + |||||
T Consensus       143 a~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G  222 (308)
T d1p4oa_         143 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  222 (308)
T ss_dssp             HHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHH
Confidence            99999999999999996 44               443322                        4567888 9 99999


Q ss_pred             -------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 -------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 -------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                   |.+.+..+++..+.+|.+++.|..||+++++||.+||+.||++||||++|++.|+..++
T Consensus       223 ~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         223 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                         78888999999999999999999999999999999999999999999999999876654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.6e-25  Score=162.02  Aligned_cols=152  Identities=18%  Similarity=0.231  Sum_probs=116.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+. ++..+||+|++++ |    ++..                 ++.. +..++...++.+..+++.
T Consensus        59 ~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~-g----~L~~-----------------~l~~~~~~~~~~~~~~i~~qi~~  115 (276)
T d1uwha_          59 RKTRHVNILLFMGYST-APQLAIVTQWCEG-S----SLYH-----------------HLHIIETKFEMIKLIDIARQTAQ  115 (276)
T ss_dssp             TTCCCTTBCCEEEEEC-SSSCEEEEECCCE-E----EHHH-----------------HHHTSCCCCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeeeeEEEe-ccEEEEEEecCCC-C----CHHH-----------------HHhhccCCCCHHHHHHHHHHHHH
Confidence            5688999999998775 3457899999886 3    1222                 3322 234667788889999999


Q ss_pred             CceeeccCCcccccc-cc---------------cc-----------------------cccC----CCCCccc-e-EEEe
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL-----------------------VHGT----NLSGVVV-S-AVDF  117 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~----~~~~~~~-s-Vwsf  117 (189)
                      |+.|+|+.+++|||+ |+               |+                       |||.    ..+.|+. + ||||
T Consensus       116 gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~  195 (276)
T d1uwha_         116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF  195 (276)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHH
T ss_pred             HHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhh
Confidence            999999999999996 55               33                       2322    2345899 9 9999


Q ss_pred             c------------CCCCChH-HHHHHHHcCCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         118 G------------SGGMTNA-EVLHQVEHGYRMP----CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       118 G------------~~~~~~~-~~~~~v~~g~~~~----~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                      |            |.+.+.. .+...+.++...|    .+..||+++.+||.+||+.||++||||++|++.|+.+.++
T Consensus       196 Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         196 GIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            9            7776654 4455556676544    4678999999999999999999999999999999988764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-25  Score=168.44  Aligned_cols=165  Identities=17%  Similarity=0.162  Sum_probs=115.8

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC---ccCCCCCcCHhHHHHHhhhccCC
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET---QKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g---yl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      +|+|++++++.+...+..|||+|+++++. +.-.++.. ...............   .......++..++..+..+++.|
T Consensus        99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~-L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~g  176 (325)
T d1rjba_          99 SHENIVNLLGACTLSGPIYLIFEYCCYGD-LLNYLRSK-REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKG  176 (325)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCB-HHHHHHTT-TTCC---------------------CCHHHHHHHHHHHHHH
T ss_pred             CCCcEeEEEEEEeeCCeEEEEEEcCCCCc-HHHHHHhc-cCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHH
Confidence            79999999999888888999999999843 21111110 111100000000000   01112234467788899999999


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|||+ |+               |+|+..                        ..+.|+. + |||||   
T Consensus       177 l~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil  256 (325)
T d1rjba_         177 MEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL  256 (325)
T ss_dssp             HHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHH
Confidence            99999999999996 55               333222                        4577899 9 99999   


Q ss_pred             ----------CCCCChH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q psy1684         119 ----------SGGMTNA-EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLE  173 (189)
Q Consensus       119 ----------~~~~~~~-~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~  173 (189)
                                |.+.+.. .+...+..+.+++.|..||+++.+||.+||+.||++||||+||++.|.
T Consensus       257 ~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         257 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence                      5555544 444556788999999999999999999999999999999999999985

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.1e-25  Score=166.95  Aligned_cols=152  Identities=20%  Similarity=0.250  Sum_probs=118.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.+.. +..++|.+.+..++     +..        +        .......++...+..+..+++.|
T Consensus        66 ~~l~HpnIv~l~g~~~~-~~~~~v~e~~~~~~-----l~~--------~--------~~~~~~~~~~~~~~~i~~qi~~g  123 (317)
T d1xkka_          66 ASVDNPHVCRLLGICLT-STVQLITQLMPFGC-----LLD--------Y--------VREHKDNIGSQYLLNWCVQIAKG  123 (317)
T ss_dssp             HHCCCTTBCCEEEEEES-SSEEEEEECCTTCB-----HHH--------H--------HHHTSSSCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeeEEEEEec-CCeeEEEEeccCCc-----ccc--------c--------ccccccCCCHHHHHHHHHHHHHH
Confidence            35788999998887754 44566667666532     111        0        11113345567788888999999


Q ss_pred             ceeeccCCcccccc-cc---------------cc-----------------------cccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YL-----------------------VHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l-----------------------~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.|+|..+++|||+ |+               |+                       |+|. ..+.|+. + |||||   
T Consensus       124 l~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil  203 (317)
T d1xkka_         124 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV  203 (317)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHH
Confidence            99999999999996 55               22                       2222 4567899 9 99999   


Q ss_pred             ----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFT  177 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~  177 (189)
                                |.+.+..++...+.+|.+++.|+.||+++++||.+||+.||++||||++|+..|+.+.+
T Consensus       204 ~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         204 WELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence                      67777888888899999999999999999999999999999999999999999988765

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.3e-24  Score=159.37  Aligned_cols=148  Identities=19%  Similarity=0.305  Sum_probs=116.7

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+.+ +..+||+|++..++     +..                 ++. ....+....++.+..+.+.
T Consensus        66 ~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~-----l~~-----------------~~~~~~~~l~~~~~~~~~~qi~~  122 (273)
T d1u46a_          66 HSLDHRNLIRLYGVVLT-PPMKMVTELAPLGS-----LLD-----------------RLRKHQGHFLLGTLSRYAVQVAE  122 (273)
T ss_dssp             HHCCCTTBCCEEEEECS-SSCEEEEECCTTCB-----HHH-----------------HHHHHGGGSCHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEEEEEEee-cchheeeeeecCcc-----hhh-----------------hhhcccCCCCHHHHHHHHHHHHH
Confidence            35789999999998854 56889999988733     111                 111 1234557788889999999


Q ss_pred             CceeeccCCcccccc-cc---------------cccccC-------------------------CCCCccc-e-EEEec-
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YLVHGT-------------------------NLSGVVV-S-AVDFG-  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l~~~~-------------------------~~~~~~~-s-VwsfG-  118 (189)
                      |+.|+|..+++|||+ |+               |+++..                         ....++. + ||||| 
T Consensus       123 gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gv  202 (273)
T d1u46a_         123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGV  202 (273)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHH
T ss_pred             HHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHH
Confidence            999999999999996 55               222211                         3456888 9 99999 


Q ss_pred             ------------CCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q psy1684         119 ------------SGGMTNAEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLED  174 (189)
Q Consensus       119 ------------~~~~~~~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~  174 (189)
                                  |.+.+..++...+ ..+.+++.|+.+|+++.+||.+||+.||++||||++|.+.|++
T Consensus       203 il~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         203 TLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence                        6778888888887 5678899999999999999999999999999999999988865

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.3e-24  Score=160.03  Aligned_cols=167  Identities=19%  Similarity=0.288  Sum_probs=119.6

Q ss_pred             ChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      +|+|++++++.+...+..+||+|++++ |++.-.++.. .........   ..+ .......++..++..+..+++.|+.
T Consensus        85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~-g~l~~~l~~~-~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~qi~~gl~  159 (311)
T d1t46a_          85 NHMNIVNLLGACTIGGPTLVITEYCCY-GDLLNFLRRK-RDSFICSKT---SPAIMEDDELALDLEDLLSFSYQVAKGMA  159 (311)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTT-EEHHHHHHHT-TTTC-----------------CCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEEcCCC-CCHHHHHHhc-ccccccccc---ccccccccccCCCHHHHHHHHHHHHHHHH
Confidence            699999999999888889999999997 4221111110 000000000   000 1122334557788889999999999


Q ss_pred             eeccCCcccccc-cc---------------cccc-----------------------cC-CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVH-----------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~-----------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      ++|..+++|||+ |+               |+++                       |. ..+.++. + |||||     
T Consensus       160 ~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~e  239 (311)
T d1t46a_         160 FLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE  239 (311)
T ss_dssp             HHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHH
Confidence            999999999996 65               2222                       11 4567899 9 99999     


Q ss_pred             --------CCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 --------SGGMTN-AEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 --------~~~~~~-~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                              +.+.+. ..+...+..|.++..|..+|+++.+||.+||+.||++||||++|++.|+++++.
T Consensus       240 llt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         240 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence                    444444 345555688999999999999999999999999999999999999999988775

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=9.7e-24  Score=156.64  Aligned_cols=166  Identities=19%  Similarity=0.242  Sum_probs=113.1

Q ss_pred             ChHHHHHHhcCCCCC-CCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCce
Q psy1684           7 KRIEAEKKLLLPEND-HGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLC   85 (189)
Q Consensus         7 ~~~n~~~lL~~~~~~-~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~   85 (189)
                      .|+|++.+++.+... ...++|+|+++++. +.-.+... ...........    .......++..++..+..+++.|+.
T Consensus        75 ~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~-L~~~l~~~-~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~qi~~gl~  148 (299)
T d1ywna1          75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGN-LSTYLRSK-RNEFVPYKVAP----EDLYKDFLTLEHLICYSFQVAKGME  148 (299)
T ss_dssp             CCTTBCCEEEEECSTTSCCEEEEECCTTCB-HHHHHHHT-GGGBCC---------------CBCHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEeeeeeccCCCeEEEEEEecCCCc-HHHHHHhc-cccccccccch----hhhhcccCCHHHHHHHHHHHHHHHH
Confidence            467777777655443 34688888888733 21111110 00000000000    0001223457778889999999999


Q ss_pred             eeccCCcccccc-cc---------------cccccC------------------------CCCCccc-e-EEEec-----
Q psy1684          86 VNLRKPCVQVSC-RI---------------YLVHGT------------------------NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        86 ~~~~~~~~~~~~-p~---------------~l~~~~------------------------~~~~~~~-s-VwsfG-----  118 (189)
                      |+|..+++|||+ |+               |+|+..                        ..+.|+. + |||||     
T Consensus       149 ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~e  228 (299)
T d1ywna1         149 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  228 (299)
T ss_dssp             HHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHH
Confidence            999999999996 55               444321                        4566899 9 99999     


Q ss_pred             --------CCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q psy1684         119 --------SGGMT-NAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTM  178 (189)
Q Consensus       119 --------~~~~~-~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~  178 (189)
                              |.+.+ ..++...+..|.+++.|..+|+++.+||.+||+.||++||||+||++.|++++++
T Consensus       229 llt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         229 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence                    55554 3556667789999999999999999999999999999999999999999999875

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.3e-21  Score=117.74  Aligned_cols=92  Identities=30%  Similarity=0.413  Sum_probs=83.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|......+|+||||++.+.+|.|+||++.  .+.++|++|.+..+|  ++.+...|. +.+||+||
T Consensus         4 Wy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y   81 (100)
T d1rjaa_           4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRD--TQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYH   81 (100)
T ss_dssp             CBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECT--TSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEc--CCCceEEEEEECCCCCEEecCCCccCCHHHHHHHH
Confidence            9999999999999997777789999999999888999999999  999999999988777  677777899 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      .....|+...+..||.+
T Consensus        82 ~~~~~~~~~~L~~Pc~~   98 (100)
T d1rjaa_          82 RAQSLSHGLRLAAPCRK   98 (100)
T ss_dssp             HHCCTTSSSCCCSBCCC
T ss_pred             hhCCCCCccCcCeecCC
Confidence            99999999888888854

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.8e-20  Score=114.88  Aligned_cols=89  Identities=28%  Similarity=0.400  Sum_probs=80.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+||+||.
T Consensus         6 Wy~g~isR~eAe~~L~--~~~~G~FLVR~S~~~~g~~vLSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LI~~y~   81 (97)
T d1jwoa_           6 WFHGKISGQEAVQQLQ--PPEDGLFLVRESARHPGDYVLCVSF--GRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYS   81 (97)
T ss_dssp             TEEESCCHHHHHHHTC--SCCTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEESSSEESSTTSCCBSCHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHhc--CCCCCeEEEEecCCCCccEEEEEEe--cCceEEEEEEEcCCcEEecCCcccCCHHHHHHHHh
Confidence            9999999999999994  3468999999999888999999999  999999999887766 888778898 999999999


Q ss_pred             hccCCceeeccCCcc
Q psy1684          79 KDADGLCVNLRKPCV   93 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~   93 (189)
                      +..+|+.+.+..||.
T Consensus        82 ~~~~~L~~~L~~P~~   96 (97)
T d1jwoa_          82 KDKGAICTKLVRPKR   96 (97)
T ss_dssp             HCCTTSSSCCCCBCC
T ss_pred             hCCCCCCccCCccCc
Confidence            999999988888874

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4e-20  Score=115.69  Aligned_cols=94  Identities=43%  Similarity=0.683  Sum_probs=83.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+|+++..   .++.+.|+.|....+|  |+.+...|. +.+||
T Consensus         3 Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~LV   82 (103)
T d1qcfa2           3 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV   82 (103)
T ss_dssp             TEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHHHH
Confidence            99999999999999876767899999999999989999999752   2568999999988777  777777899 99999


Q ss_pred             HHhhhccCCceeeccCCccc
Q psy1684          75 EHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~~   94 (189)
                      +||.+.++|+.+.+..||+.
T Consensus        83 ~~y~~~~~gL~~~L~~PC~~  102 (103)
T d1qcfa2          83 DHYKKGNDGLCQKLSVPCMS  102 (103)
T ss_dssp             HHHTSSCTTSSSCCCSBCCC
T ss_pred             HHHhhCCCCCCccCCccCCC
Confidence            99999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.6e-22  Score=147.36  Aligned_cols=144  Identities=10%  Similarity=0.035  Sum_probs=114.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++....++..|||+|++++ |+    +..                 ++.....+...+...+..+.+.|
T Consensus        61 ~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~-g~----L~~-----------------~l~~~~~l~e~~~~~i~~qi~~a  118 (263)
T d2j4za1          61 SHLRHPNILRLYGYFHDATRVYLILEYAPL-GT----VYR-----------------ELQKLSKFDEQRTATYITELANA  118 (263)
T ss_dssp             HTCCCTTBCCEEEEEECSSEEEEEEECCTT-CB----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             HhcCCCCCCeEEEEEEECCEEEEEEeecCC-Cc----HHH-----------------HHhhcCCCCHHHHHHHHHHHHHH
Confidence            367899999999887777778899999886 31    111                 23323345567777888899999


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-------------------ccC-CCCCccc-e-EEEec-------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-------------------HGT-NLSGVVV-S-AVDFG-------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-------------------~~~-~~~~~~~-s-VwsfG-------  118 (189)
                      +.++|..+++|||+ |+               |+|                   ||. .+..|+. + |||||       
T Consensus       119 l~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell  198 (263)
T d2j4za1         119 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL  198 (263)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHh
Confidence            99999999999996 66               222                   222 5566899 9 99999       


Q ss_pred             -----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                           |.+.+..++...+.++. ++.|+.+|+++.+|+.+||+.||++|||++|+++
T Consensus       199 ~G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         199 VGKPPFEANTYQETYKRISRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HSSCTTCCSSHHHHHHHHHTTC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCCCCCCCCHHHHHHHHHcCC-CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence                 77888888888887664 5678899999999999999999999999999986

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.7e-20  Score=114.65  Aligned_cols=90  Identities=34%  Similarity=0.499  Sum_probs=81.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|..  .++|+||||++.+.+|.|+||++.  .+.++|++|....++ ++.+...|. +.+||+||+
T Consensus         6 Wy~g~isR~~Ae~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~   81 (101)
T d1k9aa2           6 WFHGKITREQAERLLYP--PETGLFLVRESTNYPGDYTLCVSC--EGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT   81 (101)
T ss_dssp             TBCTTCCHHHHHHHTCS--CCTTEEEEEECSSSTTSEEEEEEC--SSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHcC--CCCCCEEEeccCCCCCCEEEEEEe--CCccEEEEEEEcCCCceecCCcccCCHHHHHHHHh
Confidence            99999999999999853  468999999998888999999999  999999999988777 887777899 999999999


Q ss_pred             hccCCceeeccCCccc
Q psy1684          79 KDADGLCVNLRKPCVQ   94 (189)
Q Consensus        79 ~~a~gl~~~~~~~~~~   94 (189)
                      +..+|+.+.+..||..
T Consensus        82 ~~~~gl~~~L~~P~~~   97 (101)
T d1k9aa2          82 TDADGLCTRLIKPKVM   97 (101)
T ss_dssp             HCCTTSSSCCCEECCC
T ss_pred             hCCCCCceeCCccccC
Confidence            9999999999888754

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.1e-20  Score=119.40  Aligned_cols=92  Identities=28%  Similarity=0.357  Sum_probs=83.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|......+|+||||+|.+..|.|+||++.  .+.++|++|.+..+|  ++.....|. +.+||+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~~Y   84 (129)
T d1a81a1           7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAH--GRKAHHYTIERELNGTYAIAGGRTHASPADLCHYH   84 (129)
T ss_dssp             TBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeee--cccceEEEEEEcCCCCeeecCCcccCCHHHHHHHH
Confidence            9999999999999997666688999999999988999999999  999999999988887  677677899 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ++..+|+.+.+..||..
T Consensus        85 ~~~~~gl~~~L~~P~~~  101 (129)
T d1a81a1          85 SQESDGLVCLLKKPFNR  101 (129)
T ss_dssp             TTCCTTSSSCCCEECCC
T ss_pred             hhCCCCCcccCCCCCCC
Confidence            99999999999988743

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=8e-20  Score=117.50  Aligned_cols=90  Identities=28%  Similarity=0.347  Sum_probs=81.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|..+...+|+||||.+.. .+.|+||++.  .+.++|++|.+..+|  ++.....|. +.+||+||
T Consensus        31 Wyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~-~g~yvLSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y  107 (124)
T d2oq1a2          31 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIY--GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL  107 (124)
T ss_dssp             TBCSSCCHHHHHHHHHSSCCCTTEEEEEECSS-TTEEEEEEEE--TTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHH
T ss_pred             CccCCCCHHHHHHHHhhcCCCCceEEeEecCC-CCCEEEEeec--CCceEEEEEEECCCCCEEeCCCcccCCHHHHHHHH
Confidence            99999999999999987777899999999966 5889999999  999999999988777  666667888 99999999


Q ss_pred             hhccCCceeeccCCcc
Q psy1684          78 SKDADGLCVNLRKPCV   93 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~   93 (189)
                      ++..+|+.+.+..||+
T Consensus       108 ~~~~~gL~~~L~~PcP  123 (124)
T d2oq1a2         108 KLKADGLIYCLKEACP  123 (124)
T ss_dssp             HHCCTTSSSCCCSBCC
T ss_pred             hhCCCCCcccCCCcCc
Confidence            9999999999998875

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.9e-20  Score=119.00  Aligned_cols=92  Identities=35%  Similarity=0.514  Sum_probs=84.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|......+|+||||+|.+..|.|+||++.  .+.++||+|....+|  ++.+...|. +.+||+||
T Consensus         8 Wy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~--~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~~Y   85 (130)
T d2oq1a1           8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH--DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFY   85 (130)
T ss_dssp             TBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHH
T ss_pred             CccCCCCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEee--CCceEEEEEEEcCCCceeccCCCCcCCHHHHHHHH
Confidence            9999999999999997666788999999999998999999999  999999999988777  676667799 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      +...+|+.+.+..||..
T Consensus        86 ~~~~~gL~~~L~~P~~r  102 (130)
T d2oq1a1          86 SRDPDGLPCNLRKPCNR  102 (130)
T ss_dssp             HHCCTTSSSCCCSBCCC
T ss_pred             hhCCCCCCccCCccCCC
Confidence            99999999999999865

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6.1e-23  Score=150.05  Aligned_cols=146  Identities=12%  Similarity=0.080  Sum_probs=107.0

Q ss_pred             CCCCChHHHHHHhcCCCC--CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC----CCCCcCHhHHHHH
Q psy1684           3 FGKIKRIEAEKKLLLPEN--DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA----GRTTIHYPELVEH   76 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~--~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~----~~~~~~l~~li~~   76 (189)
                      +..++|+|++++++.+..  ....|||+|++++ |+    +..                 ++.    .+..++...+..+
T Consensus        57 l~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~-g~----L~~-----------------~i~~~~~~~~~l~e~~~~~i  114 (269)
T d2java1          57 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG-GD----LAS-----------------VITKGTKERQYLDEEFVLRV  114 (269)
T ss_dssp             TTSCCCTTBCCEEEEEEC----CEEEEEECCTT-EE----HHH-----------------HHHHHHHHTCCCCHHHHHHH
T ss_pred             HHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCC-Cc----HHH-----------------HHHhccccCCCCCHHHHHHH
Confidence            457889999998876533  2346889998876 31    221                 111    1234556677778


Q ss_pred             hhhccCCceeeccCC-----cccccc-cc------------------------------------cccccC-CCCCccc-
Q psy1684          77 YSKDADGLCVNLRKP-----CVQVSC-RI------------------------------------YLVHGT-NLSGVVV-  112 (189)
Q Consensus        77 ~~~~a~gl~~~~~~~-----~~~~~~-p~------------------------------------~l~~~~-~~~~~~~-  112 (189)
                      ..+.+.|+.|+|..+     ++|||+ |+                                    ++|||. ....|+. 
T Consensus       115 ~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~  194 (269)
T d2java1         115 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK  194 (269)
T ss_dssp             HHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChH
Confidence            889999999999864     999996 65                                    223332 5667999 


Q ss_pred             e-EEEec------------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         113 S-AVDFG------------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       113 s-VwsfG------------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      + |||||            |.+.+..++...+.++..++.|..+|+++.+||.+||+.||++|||++||++
T Consensus       195 ~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         195 SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            9 99999            7888889999999888888889999999999999999999999999999875

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=6.3e-20  Score=114.30  Aligned_cols=91  Identities=30%  Similarity=0.342  Sum_probs=81.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|..+  .+|+||||++.+.+|.|+||++.  .+.+.|++|....+|  ++.+...|. +.+||+||
T Consensus         7 Wy~g~isR~eAe~lL~~~--~~G~FLVR~S~~~~~~~~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~y   82 (101)
T d1opka2           7 WYHGPVSRNAAEYLLSSG--INGSFLVRESESSPGQRSISLRY--EGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH   82 (101)
T ss_dssp             TEEEECCHHHHHHHGGGC--CTTEEEEEECSSSTTCEEEEEEE--TTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHhcCC--CCCeEEEEecCCCCCCEEEEEEc--CcceEEEEeEECCCCCEEeCCCcccCCHHHHHHHH
Confidence            999999999999999643  68999999999888999999999  999999999988888  566677788 99999999


Q ss_pred             hhccCCceeeccCCcccc
Q psy1684          78 SKDADGLCVNLRKPCVQV   95 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~~   95 (189)
                      ....+|+.+.+..||..+
T Consensus        83 ~~~~~~l~~~L~~P~pr~  100 (101)
T d1opka2          83 STVADGLITTLHYPAPKR  100 (101)
T ss_dssp             TTCCTTSSSCCCEECCCC
T ss_pred             hhCCCCCceECCCccCCC
Confidence            999999999888888654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=1.3e-22  Score=151.03  Aligned_cols=146  Identities=12%  Similarity=0.073  Sum_probs=112.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+|++++++.+...+..|||+|++.+ |.+.    .                 ++..+..++..++..+..+++.
T Consensus        69 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~-g~l~----~-----------------~~~~~~~l~e~~~~~i~~qi~~  126 (309)
T d1u5ra_          69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASD----L-----------------LEVHKKPLQEVEIAAVTHGALQ  126 (309)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHH----H-----------------HHHHTSCCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCEeeEEEEEEECCEEEEEEEecCC-CchH----H-----------------HHHhCCCCCHHHHHHHHHHHHH
Confidence            3578899999999887767778899998875 3110    0                 1222344566777888899999


Q ss_pred             CceeeccCCcccccc-cc--------------------------------cccccC----CCCCccc-e-EEEec-----
Q psy1684          83 GLCVNLRKPCVQVSC-RI--------------------------------YLVHGT----NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~--------------------------------~l~~~~----~~~~~~~-s-VwsfG-----  118 (189)
                      |+.|+|..+++|||+ |+                                ++|||.    ..+.|+. + |||||     
T Consensus       127 aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilye  206 (309)
T d1u5ra_         127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  206 (309)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHH
Confidence            999999999999996 65                                334443    2456999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMP-CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~-~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |.+.+..+.+..+..+..++ .+..+|+++.+||.+||+.||++|||++|+++
T Consensus       207 l~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence                   77777778887876665544 45678999999999999999999999999975

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.8e-19  Score=112.16  Aligned_cols=93  Identities=41%  Similarity=0.692  Sum_probs=81.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||.+.+.+|.|+||++..   ....+.|+.|....+|  ++.+...|. +.+||
T Consensus         6 Wy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~~LV   85 (105)
T d1lkka_           6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV   85 (105)
T ss_dssp             TBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecCCcccCCHHHHH
Confidence            99999999999999977777899999999998889999999863   2235899999887777  777777799 99999


Q ss_pred             HHhhhccCCceeeccCCcc
Q psy1684          75 EHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~   93 (189)
                      +||+.+++|+.+.+..||.
T Consensus        86 ~~y~~~~~gL~~~L~~Pcp  104 (105)
T d1lkka_          86 RHYTNASDGLCTRLSRPCQ  104 (105)
T ss_dssp             HHHHHCCTTSSSCCCSBCC
T ss_pred             HHHhhCCCCCCccCCCcCC
Confidence            9999999999999988874

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.8e-19  Score=113.18  Aligned_cols=93  Identities=43%  Similarity=0.649  Sum_probs=81.2

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|.....++|+||||++.+..|.|+||++..   ....+.|+.+....+|  ++.+...|. +.+||
T Consensus         7 Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~~~~F~sl~eLV   86 (106)
T d1o48a_           7 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV   86 (106)
T ss_dssp             TEEESCCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcCCeeECCHHHHH
Confidence            99999999999999977777899999999998889999999863   2346889999887777  777777899 99999


Q ss_pred             HHhhhccCCceeeccCCcc
Q psy1684          75 EHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~~~   93 (189)
                      +||.++++|+.+.+..||+
T Consensus        87 ~~y~~~~~gL~~~L~~pcP  105 (106)
T d1o48a_          87 AYYSKHADGLCHRLTTVCP  105 (106)
T ss_dssp             HHHTTCCTTSSSCCCSBCC
T ss_pred             HHHhhCCCCCCccCCCcCC
Confidence            9999999999999888874

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.2e-19  Score=115.48  Aligned_cols=94  Identities=45%  Similarity=0.684  Sum_probs=83.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec--CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR--SSFCLKMTTGRSLFET--QKAGRTTIH-YPELVE   75 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~--~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~   75 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+|+++..  ..+.++|++|....+|  ++.+...|. +.+||+
T Consensus        14 Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~eLV~   93 (114)
T d1blja_          14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQ   93 (114)
T ss_dssp             SBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeeccCCCEEEEEEEEEcCCCCEEecCCceECCHHHHHH
Confidence            99999999999998877667899999999998889999999853  2456899999988777  777677799 999999


Q ss_pred             HhhhccCCceeeccCCccc
Q psy1684          76 HYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        76 ~~~~~a~gl~~~~~~~~~~   94 (189)
                      ||.++++|+...+..||+.
T Consensus        94 ~y~~~~~gL~~~L~~PC~~  112 (114)
T d1blja_          94 HYSKKGDGLCQKLTLPCVN  112 (114)
T ss_dssp             HHHHCCSSSSSCCCCCSCC
T ss_pred             HHhhCCCCCCccCCccCcC
Confidence            9999999999999999875

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3e-19  Score=115.03  Aligned_cols=91  Identities=31%  Similarity=0.449  Sum_probs=81.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|......+|+||||++.. .+.|+||++.  .+.++|++|....+|  ++.+...|. +.+||+||
T Consensus        31 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~-~~~yvLSv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~~y  107 (125)
T d1a81a2          31 WFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLH--EGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY  107 (125)
T ss_dssp             TEEEECCHHHHHHHHHSSCCCTTCEEEEECSS-SSCEEEEEEE--TTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCceEEEEecCC-CCCEEEEeec--cccceeEeeeEcCCCcEeccCCcccCCHHHHHHHH
Confidence            99999999999999977777889999999865 4889999999  999999999988887  566666788 99999999


Q ss_pred             hhccCCceeeccCCccc
Q psy1684          78 SKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        78 ~~~a~gl~~~~~~~~~~   94 (189)
                      ....+|+.+.+..||.+
T Consensus       108 ~~~~~gL~~~L~~P~~k  124 (125)
T d1a81a2         108 SYKADGLLRVLTVPCQK  124 (125)
T ss_dssp             TTCCTTSSSCCCCBCCC
T ss_pred             hhCCCCCCccCCeeCCC
Confidence            99999999999998854

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.1e-19  Score=111.34  Aligned_cols=91  Identities=23%  Similarity=0.365  Sum_probs=77.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-----ccCC-CCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-----QKAG-RTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-----yl~~-~~~~~-l~~l   73 (189)
                      ||||.|+|..|+++|.....++|+||||++.+.+|.|+||++.  .+.+.|++|....++     ++.+ ...|. +.+|
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~L   84 (105)
T d1nrva_           7 WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCH--HQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQL   84 (105)
T ss_dssp             TBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEE--TTEEEEEEEEEC-----CCEESSTTSSCBSSHHHH
T ss_pred             ccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEE--CCceeEEEEEEecCCCeEEEEECCCCcccCCHHHH
Confidence            9999999999999997666688999999999988999999999  999999999876543     2333 34688 9999


Q ss_pred             HHHhhhccCCceeeccCCcc
Q psy1684          74 VEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~   93 (189)
                      |+||....+|+.+.+..||+
T Consensus        85 V~~y~~~~~~L~~~L~~Pc~  104 (105)
T d1nrva_          85 VDFYQLNKGVLPCKLKHHCI  104 (105)
T ss_dssp             HHHHTTCCTTSSSCCCEECC
T ss_pred             HHHhccCcCCCCccCCcCCC
Confidence            99999999999998888875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=3.6e-21  Score=143.06  Aligned_cols=145  Identities=15%  Similarity=0.007  Sum_probs=111.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++........|||+|++++ |+    +..                 ++.....++..+...+..+.+.|
T Consensus        62 ~~l~HpnIv~l~~~~~~~~~~~lvmE~~~g-g~----L~~-----------------~l~~~~~l~e~~~~~~~~qi~~a  119 (307)
T d1a06a_          62 HKIKHPNIVALDDIYESGGHLYLIMQLVSG-GE----LFD-----------------RIVEKGFYTERDASRLIFQVLDA  119 (307)
T ss_dssp             HTCCCTTBCCEEEEEECSSEEEEEECCCCS-CB----HHH-----------------HHHTCSCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEEECCEEEEEEeccCC-Cc----HHH-----------------hhhcccCCCHHHHHHHHHHHHHH
Confidence            357888888888877666677888888876 31    222                 34444556677778888899999


Q ss_pred             ceeeccCCcccccc-cc------------------cc--------------------cccC-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI------------------YL--------------------VHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~------------------~l--------------------~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|||+ |+                  |+                    |||. ..+.|+. + |||+|   
T Consensus       120 l~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvil  199 (307)
T d1a06a_         120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA  199 (307)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHH
Confidence            99999999999996 55                  11                    2221 5567999 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCC-C--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYR-M--PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~-~--~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..++...+.++.. +  +.++.+|+++.+|+.+||+.||++|||++|+++
T Consensus       200 yell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         200 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                     777778888888866543 2  234679999999999999999999999999987

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.7e-22  Score=146.20  Aligned_cols=145  Identities=10%  Similarity=0.015  Sum_probs=111.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCC-CCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAG-RTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~-~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++.+..++..+||+|++++ |+    +..                 ++.. ...++..+...+..+.+.
T Consensus        64 ~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~-g~----L~~-----------------~~~~~~~~l~e~~~~~i~~qi~~  121 (288)
T d2jfla1          64 ASCDHPNIVKLLDAFYYENNLWILIEFCAG-GA----VDA-----------------VMLELERPLTESQIQVVCKQTLD  121 (288)
T ss_dssp             HHCCCTTBCCEEEEEEETTEEEEEEECCTT-EE----HHH-----------------HHHHHTSCCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEeeCCeEEEEEecCCC-Cc----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHH
Confidence            357899999999887777788999999887 31    111                 2211 234556677778889999


Q ss_pred             CceeeccCCcccccc-cc---------------cc---------------------cccC------CCCCccc-e-EEEe
Q psy1684          83 GLCVNLRKPCVQVSC-RI---------------YL---------------------VHGT------NLSGVVV-S-AVDF  117 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~---------------~l---------------------~~~~------~~~~~~~-s-Vwsf  117 (189)
                      |+.|+|..+++|||+ |+               |+                     |||.      ....|+. + ||||
T Consensus       122 gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSl  201 (288)
T d2jfla1         122 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL  201 (288)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHH
T ss_pred             HHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHH
Confidence            999999999999996 65               22                     2222      2455899 9 9999


Q ss_pred             c------------CCCCChHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         118 G------------SGGMTNAEVLHQVEHGYR--MPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       118 G------------~~~~~~~~~~~~v~~g~~--~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |            |.+.+..+++..+.++..  ++.|..+|+++.+||.+||+.||++|||++|+++
T Consensus       202 Gvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         202 GITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9            777788888888876653  3456789999999999999999999999999976

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.2e-21  Score=143.22  Aligned_cols=145  Identities=10%  Similarity=0.048  Sum_probs=106.1

Q ss_pred             CCCChHHHHHHhcCCCC----CCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPEN----DHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~----~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+..    ....|||+|+++++.     +..                 ++.....++...+..+..+
T Consensus        63 ~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~-----L~~-----------------~l~~~~~~~~~~~~~~~~q  120 (270)
T d1t4ha_          63 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGT-----LKT-----------------YLKRFKVMKIKVLRSWCRQ  120 (270)
T ss_dssp             TTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCB-----HHH-----------------HHHHHSSCCHHHHHHHHHH
T ss_pred             HhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCc-----HHH-----------------HHhccccccHHHHHHHHHH
Confidence            46788888888765321    223577888777622     111                 3333345556777788889


Q ss_pred             ccCCceeeccCC--cccccc-cc-----------------------------------cccccCCCCCccc-e-EEEec-
Q psy1684          80 DADGLCVNLRKP--CVQVSC-RI-----------------------------------YLVHGTNLSGVVV-S-AVDFG-  118 (189)
Q Consensus        80 ~a~gl~~~~~~~--~~~~~~-p~-----------------------------------~l~~~~~~~~~~~-s-VwsfG-  118 (189)
                      ++.|+.|+|...  ++|||+ |+                                   ++|||...+.|+. + ||||| 
T Consensus       121 i~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGv  200 (270)
T d1t4ha_         121 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGM  200 (270)
T ss_dssp             HHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCCCCCCcCchhhHHH
Confidence            999999999987  999996 55                                   3444445667999 9 99999 


Q ss_pred             -----------CCCCC-hHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -----------SGGMT-NAEVLHQVEHGYRMP-CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -----------~~~~~-~~~~~~~v~~g~~~~-~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                 |.+.+ ..++...+..+.+++ .+..+++++.+||.+||+.||++|||++||++
T Consensus       201 ilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         201 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                       55544 456667777776543 46678999999999999999999999999875

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.6e-19  Score=109.50  Aligned_cols=91  Identities=41%  Similarity=0.578  Sum_probs=79.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec---CCCeeeEEEEEeccCC--ccCCCCCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR---SSFCLKMTTGRSLFET--QKAGRTTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~---~~~~v~h~~i~~~~~g--yl~~~~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|......+|+||||++.+.+|.|+||++..   ..+.+.|++|....+|  ++.+...|. +.+||
T Consensus         8 Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~LV   87 (104)
T d1g83a2           8 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV   87 (104)
T ss_dssp             SBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETTTEEESSHHHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecCCcccCCHHHHH
Confidence            99999999999999987777899999999999889999999863   2467999999987777  677777788 99999


Q ss_pred             HHhhhccCCceeeccCC
Q psy1684          75 EHYSKDADGLCVNLRKP   91 (189)
Q Consensus        75 ~~~~~~a~gl~~~~~~~   91 (189)
                      +||.++..|+.+.+..|
T Consensus        88 ~~y~~~~~gL~~~L~~P  104 (104)
T d1g83a2          88 QHYSERAAGLSSRLVVP  104 (104)
T ss_dssp             HHHHHCCTTSSSCCCCC
T ss_pred             HHHhhCCCCCceeCCCC
Confidence            99999999988776654

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=5.2e-19  Score=110.36  Aligned_cols=90  Identities=31%  Similarity=0.345  Sum_probs=77.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-----CCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-----RTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-----~~~~~-l~~   72 (189)
                      ||||.|+|..|+++|... ..+|+||||+|.+.+|.|+||++.  .+.+.|++|.+..+|  ++..     ...|. +.+
T Consensus         5 Wy~g~isR~~AE~lL~~~-~~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~   81 (103)
T d1i3za_           5 YYHGCLTKRECEALLLKG-GVDGNFLIRDSESVPGALCLCVSF--KKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQE   81 (103)
T ss_dssp             TEESSCCHHHHHHHHHTT-CSTTEEEEEECSSSTTCEEEEEEC--SSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHH
T ss_pred             cccCCCCHHHHHHHHHhC-CCCCeEEEEecCCCCCCEEEEEEe--CCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHH
Confidence            999999999999988544 368999999999988999999999  999999999887777  4432     23577 999


Q ss_pred             HHHHhhhccCCceeeccCCcc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~   93 (189)
                      ||+||.+..+|+.+.+..||.
T Consensus        82 LV~~y~~~~~gl~~~L~~P~~  102 (103)
T d1i3za_          82 LVSKYGKPGQGLVVHLSNPIM  102 (103)
T ss_dssp             HHHHTTSSSSSSSSCCCEECC
T ss_pred             HHHHhhhCCCCCeEeCCcccc
Confidence            999999999999888877764

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.5e-19  Score=111.70  Aligned_cols=92  Identities=24%  Similarity=0.286  Sum_probs=79.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-----ccCC-CCCcC-HhHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-----QKAG-RTTIH-YPEL   73 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-----yl~~-~~~~~-l~~l   73 (189)
                      ||||.|+|.+|+++|.....++|+||||++.+.+|.|+||++.  .+.+.|++|....++     .+.+ ...|. +.+|
T Consensus        12 Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~L   89 (113)
T d2qmsa1          12 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCH--LQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQL   89 (113)
T ss_dssp             TEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEE--TTEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHH
T ss_pred             ccCCCCCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEe--CCeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHH
Confidence            9999999999999997666688999999999888999999999  999999999865443     2333 34588 9999


Q ss_pred             HHHhhhccCCceeeccCCccc
Q psy1684          74 VEHYSKDADGLCVNLRKPCVQ   94 (189)
Q Consensus        74 i~~~~~~a~gl~~~~~~~~~~   94 (189)
                      |+||++..+|+.+.+..||.+
T Consensus        90 I~~y~~~~~~L~~~L~~pc~r  110 (113)
T d2qmsa1          90 VEFHQLNRGILPCLLRHCCTR  110 (113)
T ss_dssp             HHHHTTCCTTSSSCCCEECCS
T ss_pred             HHHhccCCCCCccccCCCCcC
Confidence            999999999999999988865

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.4e-18  Score=107.79  Aligned_cols=90  Identities=26%  Similarity=0.312  Sum_probs=77.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-c-c-----CCCCCcC-HhH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-Q-K-----AGRTTIH-YPE   72 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-y-l-----~~~~~~~-l~~   72 (189)
                      ||||.|+|.+|+++|..+. .+|+||||++.+.+|.|+||++.  .+.+.|++|.+..+| + +     .....|. +.+
T Consensus         6 wyhG~isR~eAe~lL~~~~-~~G~FLVR~S~~~~g~~~Lsv~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~   82 (104)
T d1d4ta_           6 VYHGKISRETGEKLLLATG-LDGSYLLRDSESVPGVYCLCVLY--HGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKN   82 (104)
T ss_dssp             TBCCSCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHH
T ss_pred             ccccCCCHHHHHHHHhhCC-CCCeEEEEecCCCCCCEEEEEec--CCCceEEEEEEcCCCcEEEeeccCCCCcccCCHHH
Confidence            9999999999999996443 57999999999988999999999  999999999988777 3 2     2245688 999


Q ss_pred             HHHHhhhccCCceeeccCCcc
Q psy1684          73 LVEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        73 li~~~~~~a~gl~~~~~~~~~   93 (189)
                      |+++|.+...|+.+.+..||.
T Consensus        83 Li~~y~~~~~gl~~~L~~P~~  103 (104)
T d1d4ta_          83 LISAFQKPDQGIVIPLQYPVE  103 (104)
T ss_dssp             HHHHHTSSSSSSSSCCCEECC
T ss_pred             HHHHHhhCCCCCcEeCCcccc
Confidence            999999999999888877764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6e-21  Score=141.06  Aligned_cols=144  Identities=16%  Similarity=0.082  Sum_probs=110.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .++|+|++++++........|||+|++++ |+    +..                 ++.....+....+..+..+.+.|+
T Consensus        69 ~l~HpnIv~~~~~~~~~~~~~iv~E~~~g-g~----L~~-----------------~i~~~~~l~~~~~~~~~~qi~~al  126 (293)
T d1jksa_          69 EIQHPNVITLHEVYENKTDVILILELVAG-GE----LFD-----------------FLAEKESLTEEEATEFLKQILNGV  126 (293)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEEECCCS-CB----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcEEEEEEECCEEEEEEEcCCC-cc----ccc-----------------hhccccccchhHHHHHHHHHHHHH
Confidence            56889999988887777778899998876 31    111                 222233455666777888889999


Q ss_pred             eeeccCCcccccc-cc-------------------c--------------------ccccC-CCCCccc-e-EEEec---
Q psy1684          85 CVNLRKPCVQVSC-RI-------------------Y--------------------LVHGT-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~-------------------~--------------------l~~~~-~~~~~~~-s-VwsfG---  118 (189)
                      .++|..+++|||+ |+                   |                    +|||. ....|+. + |||||   
T Consensus       127 ~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvil  206 (293)
T d1jksa_         127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT  206 (293)
T ss_dssp             HHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             HhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHH
Confidence            9999999999996 55                   1                    11111 4567899 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCC-C--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRM-P--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~-~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..+++..+..+... +  .++.+|+++.+||.+||+.||++|||++|+++
T Consensus       207 yell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         207 YILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                     7788888888888766432 2  24689999999999999999999999999986

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.2e-21  Score=140.53  Aligned_cols=144  Identities=10%  Similarity=-0.037  Sum_probs=111.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.....+..|||+|++++ |+    +..                 ++.....+...+...+..+.+.|
T Consensus        63 ~~l~HpnIv~l~~~~~~~~~~~ivmEy~~g-g~----L~~-----------------~~~~~~~l~e~~~~~~~~qi~~a  120 (288)
T d1uu3a_          63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKN-GE----LLK-----------------YIRKIGSFDETCTRFYTAEIVSA  120 (288)
T ss_dssp             HHCCSTTBCCEEEEEECSSEEEEEECCCTT-EE----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             HHcCCCCeeEEEEEEEECCEEEEEEEccCC-CC----HHH-----------------hhhccCCCCHHHHHHHHHHHHHH
Confidence            357889999988877667778899998876 31    211                 22323455666677788888999


Q ss_pred             ceeeccCCcccccc-cc---------------ccccc-----------------------C-CCCCccc-e-EEEec---
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHG-----------------------T-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~-----------------------~-~~~~~~~-s-VwsfG---  118 (189)
                      +.++|..+++|||+ |+               |+|+.                       . .+..|+. + |||+|   
T Consensus       121 l~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvil  200 (288)
T d1uu3a_         121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII  200 (288)
T ss_dssp             HHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             HHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHH
Confidence            99999999999996 66               33321                       1 4566899 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                               |.+.+..++...+.++. +..|..+++++.+||.+||+.||++|||++|++.
T Consensus       201 yell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         201 YQLVAGLPPFRAGNEYLIFQKIIKLE-YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHTTC-CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHhhCCCCCCCcCHHHHHHHHHcCC-CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence                     77778888888887764 5678899999999999999999999999999754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.2e-20  Score=139.21  Aligned_cols=144  Identities=9%  Similarity=-0.026  Sum_probs=109.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++....++..|||+|++++ |++    ..                 ++. ...++..+...+..+.+.|
T Consensus        72 ~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g-g~L----~~-----------------~~~-~~~l~~~~~~~i~~qi~~a  128 (293)
T d1yhwa1          72 RENKNPNIVNYLDSYLVGDELWVVMEYLAG-GSL----TD-----------------VVT-ETCMDEGQIAAVCRECLQA  128 (293)
T ss_dssp             HHCCCTTBCCEEEEEEETTEEEEEEECCTT-CBH----HH-----------------HHH-HSCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeeEeEEEEECCEEEEEEEecCC-CcH----HH-----------------Hhh-ccCCCHHHHHHHHHHHHHH
Confidence            357899999999877777788999999887 421    11                 111 2235566777788899999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.|+|..+++|||+ |+               |+|+                     |. ..+.|+. + |||+|     
T Consensus       129 L~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilye  208 (293)
T d1yhwa1         129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE  208 (293)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHH
Confidence            99999999999996 66               3332                     22 5567999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGY--RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~--~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                             |.+.+..+.+..+..+.  .++.|..+++++.+||.+||+.||++|||++|+++
T Consensus       209 mltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   67777777666664332  34556789999999999999999999999999975

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.1e-20  Score=136.50  Aligned_cols=145  Identities=8%  Similarity=-0.014  Sum_probs=103.2

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++....+...|||+|++++ |    ++..                 ++.....++..+...+..+.+.|
T Consensus        58 ~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g-g----~L~~-----------------~l~~~~~l~e~~~~~i~~qi~~a  115 (271)
T d1nvra_          58 KMLNHENVVKFYGHRREGNIQYLFLEYCSG-G----ELFD-----------------RIEPDIGMPEPDAQRFFHQLMAG  115 (271)
T ss_dssp             HTCCCTTBCCEEEEEEETTEEEEEEECCTT-E----EGGG-----------------GSBTTTBCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCEeeEeeeeccCceeEEEEeccCC-C----cHHH-----------------HHhcCCCCCHHHHHHHHHHHHHH
Confidence            457888888888877666677888888776 3    1222                 45445566677778888999999


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-----------------------ccC-CCCCc-cc-e-EEEec--
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-----------------------HGT-NLSGV-VV-S-AVDFG--  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-----------------------~~~-~~~~~-~~-s-VwsfG--  118 (189)
                      +.++|..+++|||+ |+               |+|                       ||. ....+ +. + |||+|  
T Consensus       116 l~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvi  195 (271)
T d1nvra_         116 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV  195 (271)
T ss_dssp             HHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHH
Confidence            99999999999996 66               333                       222 34444 67 8 99999  


Q ss_pred             ----------CCCCCh-HHHHHHH-HcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ----------SGGMTN-AEVLHQV-EHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ----------~~~~~~-~~~~~~v-~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                |.+.+. ......+ ......+.+..+++++.+|+.+||+.||++|||++|+++
T Consensus       196 lyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         196 LTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                      433332 2222233 333334444678999999999999999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.74  E-value=2e-20  Score=137.17  Aligned_cols=112  Identities=17%  Similarity=0.149  Sum_probs=88.0

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------------------------------ccccc
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------------------------------YLVHG  104 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------------------------------~l~~~  104 (189)
                      ...+...+...+..+.+.|+.++|..+++|||+ |+                                       ++|||
T Consensus       105 ~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE  184 (277)
T d1o6ya_         105 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE  184 (277)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHH
Confidence            445567778888899999999999999999996 66                                       11222


Q ss_pred             C-CCCCccc-e-EEEec------------CCCCChHHHHHHHHcC-CCCC--CCCCCCHHHHHHHHHhcccCCCCCC-CH
Q psy1684         105 T-NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEHG-YRMP--CPPGCPPRLYDIMLECWLKDPVKRP-TF  165 (189)
Q Consensus       105 ~-~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~g-~~~~--~p~~~p~~~~~l~~~C~~~~p~~RP-~~  165 (189)
                      . ....|+. + |||+|            |.+.+..++...+.++ ..++  .++.+|+++.+|+.+||+.||++|| |+
T Consensus       185 ~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa  264 (277)
T d1o6ya_         185 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTA  264 (277)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred             HHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHH
Confidence            1 5567999 9 99999            7777777777766444 3332  3467999999999999999999999 89


Q ss_pred             HHHHHHHHHHH
Q psy1684         166 ETLQWKLEDFF  176 (189)
Q Consensus       166 ~~i~~~l~~~~  176 (189)
                      +++...|.++.
T Consensus       265 ~~l~~~l~r~~  275 (277)
T d1o6ya_         265 AEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999887764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.9e-20  Score=139.87  Aligned_cols=143  Identities=11%  Similarity=0.026  Sum_probs=112.0

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCc
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGL   84 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl   84 (189)
                      .+.|+|++++++........|||+|++++ |+    +..                 ++.....++..++..+..+++.|+
T Consensus        59 ~~~hp~Iv~~~~~~~~~~~~yivmEy~~~-g~----L~~-----------------~i~~~~~~~e~~~~~~~~qi~~al  116 (320)
T d1xjda_          59 AWEHPFLTHMFCTFQTKENLFFVMEYLNG-GD----LMY-----------------HIQSCHKFDLSRATFYAAEIILGL  116 (320)
T ss_dssp             HTTCTTBCCEEEEEECSSEEEEEEECCTT-CB----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCcEEEEEEEEccCCceeEEEeecCC-Cc----HHH-----------------HhhccCCCCHHHHHHHHHHHHHHH
Confidence            46788888888877777778888888876 31    111                 333334555667778888999999


Q ss_pred             eeeccCCcccccc-cc---------------cccc---------------------cC-CCCCccc-e-EEEec------
Q psy1684          85 CVNLRKPCVQVSC-RI---------------YLVH---------------------GT-NLSGVVV-S-AVDFG------  118 (189)
Q Consensus        85 ~~~~~~~~~~~~~-p~---------------~l~~---------------------~~-~~~~~~~-s-VwsfG------  118 (189)
                      .|+|...++|||+ |+               |+++                     |. ....|+. + |||+|      
T Consensus       117 ~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyem  196 (320)
T d1xjda_         117 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM  196 (320)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHH
Confidence            9999999999996 55               2222                     21 6667999 9 99999      


Q ss_pred             ------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-HHHH
Q psy1684         119 ------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFE-TLQW  170 (189)
Q Consensus       119 ------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~-~i~~  170 (189)
                            |.+.+..++...+..+. +..|..+|+++.+|+.+||..||++|||+. +|++
T Consensus       197 ltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         197 LIGQSPFHGQDEEELFHSIRMDN-PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HhCCCCCCCCCHHHHHHHHHcCC-CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                  88888889988887764 677889999999999999999999999995 6753

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-17  Score=102.73  Aligned_cols=79  Identities=32%  Similarity=0.319  Sum_probs=70.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|.+|+++|..+. ++|+||||++.+.+|.|+||++.  .+.++|++|.+..+| |..+...|. +.+||+||.
T Consensus         5 Wy~g~isR~~Ae~lL~~~~-~~G~FLvR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~   81 (96)
T d1jyra_           5 WFFGKIPRAKAEEMLSKQR-HDGAFLIRESESAPGDFSLSVKF--GNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHR   81 (96)
T ss_dssp             TBCCSCCHHHHHHHHHTCC-STTBEEEEECSSSTTCEEEEEEE--TTEEEEEECEECTTSCEESSSCEESSHHHHHHHTT
T ss_pred             ccCCCCCHHHHHHHHhhCC-CCCeEEEEecCCCCCCEEEEEEe--CCceEEEEEEECCCCeEEeCCccCCCHHHHHHHHh
Confidence            9999999999999995543 68999999999888999999999  999999999998888 777777899 999999998


Q ss_pred             hccC
Q psy1684          79 KDAD   82 (189)
Q Consensus        79 ~~a~   82 (189)
                      ++..
T Consensus        82 ~~~l   85 (96)
T d1jyra_          82 STSV   85 (96)
T ss_dssp             SSCS
T ss_pred             hCCC
Confidence            7754

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.73  E-value=5.6e-18  Score=105.68  Aligned_cols=90  Identities=26%  Similarity=0.356  Sum_probs=76.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      ||||.|+|.+|+++|..+. .+|+||||++. ..+.|+||++.  .+.++|++|.+..+.|+.+...|. +.+||+||.+
T Consensus        11 Wy~g~i~R~eAe~lL~~~~-~~G~FLVR~S~-~~~~yvLSv~~--~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~   86 (105)
T d2fcia1          11 WYHASLTRAQAEHMLMRVP-RDGAFLVRKRN-EPNSYAISFRA--EGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEK   86 (105)
T ss_dssp             CCCSSSCSHHHHHHHHHSS-SSCCEEEEECS-STTCEEEEEEE--TTEECCCEEBCCSSCEECSSSEESTTHHHHHHHHH
T ss_pred             CccCCCCHHHHHHHHHhCC-CCCeEEEEecC-CCCCEEEEEEe--ccccEEEEEEecCCeEecCCcccCCHHHHHHHHhh
Confidence            9999999999999996543 47999999994 56899999999  999999999765333666677898 9999999999


Q ss_pred             ccCCceeeccCCccc
Q psy1684          80 DADGLCVNLRKPCVQ   94 (189)
Q Consensus        80 ~a~gl~~~~~~~~~~   94 (189)
                      ...++...+..||..
T Consensus        87 ~~~~~~~~L~~P~~~  101 (105)
T d2fcia1          87 HPLYRKMKLRYPINE  101 (105)
T ss_dssp             SCCSTTCSSCCCCCC
T ss_pred             CCCCCccCCCCCCCC
Confidence            999988888888755

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.72  E-value=4.2e-20  Score=139.61  Aligned_cols=146  Identities=16%  Similarity=0.108  Sum_probs=112.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhcc
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDA   81 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a   81 (189)
                      +..++|+|++++++....++..|||+|+++++. +    ..                 ++. ....++..++..+..+++
T Consensus        80 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~-L----~~-----------------~~~~~~~~l~e~~~~~i~~qi~  137 (352)
T d1koba_          80 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE-L----FD-----------------RIAAEDYKMSEAEVINYMRQAC  137 (352)
T ss_dssp             HTTCCSTTBCCEEEEEECSSEEEEEEECCCCCB-H----HH-----------------HTTCTTCCBCHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCh-H----HH-----------------HHHhcCCCCCHHHHHHHHHHHH
Confidence            356889999999887777777889999888632 1    11                 122 133466777888889999


Q ss_pred             CCceeeccCCcccccc-cc-----------------ccccc--------------------C-CCCCccc-e-EEEec--
Q psy1684          82 DGLCVNLRKPCVQVSC-RI-----------------YLVHG--------------------T-NLSGVVV-S-AVDFG--  118 (189)
Q Consensus        82 ~gl~~~~~~~~~~~~~-p~-----------------~l~~~--------------------~-~~~~~~~-s-VwsfG--  118 (189)
                      .|+.++|..+++|||+ |+                 |+|..                    . ....|+. + |||+|  
T Consensus       138 ~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  217 (352)
T d1koba_         138 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVL  217 (352)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHH
Confidence            9999999999999996 66                 22211                    1 5567999 9 99999  


Q ss_pred             ----------CCCCChHHHHHHHHcCCCC-C--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 ----------SGGMTNAEVLHQVEHGYRM-P--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 ----------~~~~~~~~~~~~v~~g~~~-~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                                |.+.+..+++..+.++... +  .+..+|+++.+||.+||+.||++|||++|+++
T Consensus       218 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         218 GYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                      8888888888888766432 2  33578999999999999999999999999976

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.2e-20  Score=138.60  Aligned_cols=154  Identities=16%  Similarity=0.144  Sum_probs=102.9

Q ss_pred             CCCChHHHHHHhcCCCCCCC----cEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhh
Q psy1684           4 GKIKRIEAEKKLLLPENDHG----AFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSK   79 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g----~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~   79 (189)
                      ..++|+|++++++.+..+++    .|||+|+++. |+    +..                 ++.. ..+...+.+.+..+
T Consensus        52 ~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~-g~----L~~-----------------~l~~-~~l~~~~~~~~~~~  108 (303)
T d1vjya_          52 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH-GS----LFD-----------------YLNR-YTVTVEGMIKLALS  108 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT-CB----HHH-----------------HHHH-CCBCHHHHHHHHHH
T ss_pred             hhCCCCcCcceEEEEEeCCCcceEEEEEEecccC-CC----HHH-----------------HHhc-CCCCHHHHHHHHHH
Confidence            46789999999988764433    4788888887 42    212                 2321 23446666677777


Q ss_pred             ccCCceeecc--------CCcccccc-cc---------------ccc-------------------------ccCC----
Q psy1684          80 DADGLCVNLR--------KPCVQVSC-RI---------------YLV-------------------------HGTN----  106 (189)
Q Consensus        80 ~a~gl~~~~~--------~~~~~~~~-p~---------------~l~-------------------------~~~~----  106 (189)
                      .+.|+.++|.        .+++|||+ |+               |++                         ||..    
T Consensus       109 ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  188 (303)
T d1vjya_         109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI  188 (303)
T ss_dssp             HHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCS
T ss_pred             HHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccc
Confidence            7777777775        58999996 55               222                         2211    


Q ss_pred             ---CCCccc-e-EEEec----------------------CC-----CCChHHHHHHH-HcCCCCCCCCC-----CCHHHH
Q psy1684         107 ---LSGVVV-S-AVDFG----------------------SG-----GMTNAEVLHQV-EHGYRMPCPPG-----CPPRLY  148 (189)
Q Consensus       107 ---~~~~~~-s-VwsfG----------------------~~-----~~~~~~~~~~v-~~g~~~~~p~~-----~p~~~~  148 (189)
                         ...++. + |||||                      +.     ..+..++...+ ..+.++++|..     ++.++.
T Consensus       189 ~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~  268 (303)
T d1vjya_         189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA  268 (303)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHH
T ss_pred             cccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHH
Confidence               113688 8 99999                      11     11234444444 44566666543     345689


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q psy1684         149 DIMLECWLKDPVKRPTFETLQWKLEDFFTMEG  180 (189)
Q Consensus       149 ~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~~  180 (189)
                      +||.+||+.||++||||.||++.|+++.+..+
T Consensus       269 ~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~  300 (303)
T d1vjya_         269 KIMRECWYANGAARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             HHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999987654

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.3e-17  Score=104.97  Aligned_cols=90  Identities=27%  Similarity=0.366  Sum_probs=75.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|..|+++|.... .+|+||||++.+..|.|+||++.  .+.+.|++|....++ ++.+...|. +.+||+||.
T Consensus         5 Wy~g~isR~~Ae~lL~~~~-~~G~FLvR~S~~~~g~y~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~   81 (109)
T d2shpa2           5 WFHPNITGVEAENLLLTRG-VDGSFLARPSKSNPGDLTLSVRR--NGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYM   81 (109)
T ss_dssp             TBCSSCCHHHHHHHHHHHC-CTTEEEEEECSSSTTCEEEEEEE--TTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHhhCC-CCCeEEEEecCCCCCCEEEEEEe--CCcEEEEEEEEcCCeEEEcCCcccCCHHHHHHHHH
Confidence            9999999999999985443 47999999999888999999999  999999999987777 777778899 999999998


Q ss_pred             hccC------CceeeccCCcc
Q psy1684          79 KDAD------GLCVNLRKPCV   93 (189)
Q Consensus        79 ~~a~------gl~~~~~~~~~   93 (189)
                      +...      |+...+..|+.
T Consensus        82 ~~~~~~~~~~~~~~~L~~P~~  102 (109)
T d2shpa2          82 EHHGQLKEKNGDVIELKYPLN  102 (109)
T ss_dssp             TCTTCSBSSSSCBCCCCEECC
T ss_pred             HCCCCcccCCCCeeeccccCC
Confidence            7543      44455555654

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=1.4e-17  Score=104.61  Aligned_cols=91  Identities=30%  Similarity=0.493  Sum_probs=75.9

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec----CCCeeeEEEEEeccCC----ccCCCCCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR----SSFCLKMTTGRSLFET----QKAGRTTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~----~~~~v~h~~i~~~~~g----yl~~~~~~~-l~   71 (189)
                      ||||.|+|.+|+++|.... .+|+||||++.+ +|.|+||++..    ....++|++|....+|    ++.....|. +.
T Consensus         8 Wy~g~isR~eAe~lL~~~~-~~G~FLVR~S~~-~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl~   85 (108)
T d1luia_           8 WYNKSISRDKAEKLLLDTG-KEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIP   85 (108)
T ss_dssp             TBCTTCCHHHHHHHHHHHC-CTTEEEEEECCT-TTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSSSCCBSSHH
T ss_pred             CcCCCCCHHHHHHHHHhcC-CCCeEEEEecCC-CCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCCCcccCCHH
Confidence            9999999999999995332 579999999965 58999999863    3457899999887666    566677888 99


Q ss_pred             HHHHHhhhccCCceeeccCCcc
Q psy1684          72 ELVEHYSKDADGLCVNLRKPCV   93 (189)
Q Consensus        72 ~li~~~~~~a~gl~~~~~~~~~   93 (189)
                      +|++||++.++|+.+.+..||.
T Consensus        86 ~LV~~y~~~~~~L~~~L~~Pv~  107 (108)
T d1luia_          86 LLIQYHQYNGGGLVTRLRYPVC  107 (108)
T ss_dssp             HHHHHHHTTCCSSSSSSSEECC
T ss_pred             HHHHHHhhCCCCCccCCCCcCC
Confidence            9999999999999888887763

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=2.2e-17  Score=101.61  Aligned_cols=77  Identities=23%  Similarity=0.281  Sum_probs=69.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|+|..|+++|..  .++|+||||++...+|.|+||++.  .+.+.|++|....+| |+.+...|. +.+||+||+
T Consensus         8 Wy~g~isR~~Ae~lL~~--~~~G~FLVR~S~~~~g~~~LSv~~--~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~   83 (97)
T d1r1qa_           8 WFHEGLSRHQAENLLMG--KDIGFFIIRASQSSPGDFSISVRH--EDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYR   83 (97)
T ss_dssp             TBCTTCCHHHHHHHHHT--SCTTCEEEEECSSSTTCEEEEEEC--SSSEEEEECEECTTCCEESSSCCBSSHHHHHHHTT
T ss_pred             ccCCCCCHHHHHHHHhc--CCCCCEEEeecCCCCCCEEEEEEe--cCCeEEEEEEEcCCCeEEeCCCCcCCHHHHHHHHc
Confidence            99999999999999963  578999999998888999999999  999999999999888 666677898 999999998


Q ss_pred             hcc
Q psy1684          79 KDA   81 (189)
Q Consensus        79 ~~a   81 (189)
                      ++.
T Consensus        84 ~~~   86 (97)
T d1r1qa_          84 TTS   86 (97)
T ss_dssp             TSC
T ss_pred             cCC
Confidence            764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.70  E-value=2.1e-19  Score=135.67  Aligned_cols=146  Identities=19%  Similarity=0.145  Sum_probs=111.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccC-CCCCcCHhHHHHHhhhccC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKA-GRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~-~~~~~~l~~li~~~~~~a~   82 (189)
                      ..++|+|++++++....+...|||+|+++++.     +..                 ++. ....++..+...+..+++.
T Consensus        78 ~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~-----L~~-----------------~l~~~~~~l~e~~~~~i~~qi~~  135 (350)
T d1koaa2          78 SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE-----LFE-----------------KVADEHNKMSEDEAVEYMRQVCK  135 (350)
T ss_dssp             HHTCCTTBCCEEEEEEETTEEEEEECCCCSCB-----HHH-----------------HHTCTTSCBCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEEECCEEEEEEEcCCCCC-----HHH-----------------HHHhhcCCCCHHHHHHHHHHHHH
Confidence            35789999999988777778899999988732     111                 222 1334667777888899999


Q ss_pred             CceeeccCCcccccc-cc-----------------ccccc--------------------C-CCCCccc-e-EEEec---
Q psy1684          83 GLCVNLRKPCVQVSC-RI-----------------YLVHG--------------------T-NLSGVVV-S-AVDFG---  118 (189)
Q Consensus        83 gl~~~~~~~~~~~~~-p~-----------------~l~~~--------------------~-~~~~~~~-s-VwsfG---  118 (189)
                      |+.++|..+++|||+ |+                 |++..                    . .+..|+. + |||+|   
T Consensus       136 aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvil  215 (350)
T d1koaa2         136 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS  215 (350)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHH
Confidence            999999999999996 66                 22211                    1 4566899 9 99999   


Q ss_pred             ---------CCCCChHHHHHHHHcCCC-CC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         119 ---------SGGMTNAEVLHQVEHGYR-MP--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       119 ---------~~~~~~~~~~~~v~~g~~-~~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                               |.+.+..+++..+..+.. ++  .+..+++++.+|+.+||+.||++|||++|+++.
T Consensus       216 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         216 YILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                     778888888888866542 22  224689999999999999999999999999873

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.8e-19  Score=134.57  Aligned_cols=144  Identities=10%  Similarity=-0.040  Sum_probs=108.9

Q ss_pred             CCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCC-CCcCHhHHHHHhhhccCC
Q psy1684           5 KIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGR-TTIHYPELVEHYSKDADG   83 (189)
Q Consensus         5 ~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~-~~~~l~~li~~~~~~a~g   83 (189)
                      .++|+|++++++....+...|||+|+++++.     +..                 ++... ..++..++..+..+.+.|
T Consensus        57 ~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~-----L~~-----------------~i~~~~~~l~e~~~~~i~~qi~~a  114 (321)
T d1tkia_          57 IARHRNILHLHESFESMEELVMIFEFISGLD-----IFE-----------------RINTSAFELNEREIVSYVHQVCEA  114 (321)
T ss_dssp             HSCCTTBCCEEEEEEETTEEEEEECCCCCCB-----HHH-----------------HHTSSSCCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeEEEEEEECCEEEEEEecCCCCc-----HHH-----------------HHHhcCCCCCHHHHHHHHHHHHHH
Confidence            4678888888877666667888888887622     111                 23322 245677778888899999


Q ss_pred             ceeeccCCcccccc-ccc-----------------ccccC---------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RIY-----------------LVHGT---------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~-----------------l~~~~---------------------~~~~~~~-s-VwsfG----  118 (189)
                      +.|+|..+++|||+ |+.                 ++...                     ....|+. + |||+|    
T Consensus       115 l~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily  194 (321)
T d1tkia_         115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY  194 (321)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHH
Confidence            99999999999996 662                 11111                     5566899 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCCC-C--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGYRM-P--CPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~~-~--~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+.+..+++..+.++... +  .++.+++++.+|+.+|+..||++|||++|+++
T Consensus       195 ~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         195 VLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    7777888888888766422 2  12478999999999999999999999999986

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.1e-19  Score=132.83  Aligned_cols=144  Identities=7%  Similarity=-0.058  Sum_probs=109.1

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|+++++......+..|||+|++++ |++    ..                 ++.....++......+..+...|
T Consensus        60 ~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~g-g~L----~~-----------------~~~~~~~~~e~~~~~~~~qil~a  117 (337)
T d1o6la_          60 QNTRHPFLTALKYAFQTHDRLCFVMEYANG-GEL----FF-----------------HLSRERVFTEERARFYGAEIVSA  117 (337)
T ss_dssp             HSCCCTTBCCEEEEEECSSEEEEEEECCTT-CBH----HH-----------------HHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEEEeeeccccccccceeccCC-Cch----hh-----------------hhhcccCCcHHHHHHHHHHHhhh
Confidence            356788888888777667777888888876 321    11                 23323345555566677788899


Q ss_pred             ceeeccCCcccccc-cc---------------ccc---------------------ccC-CCCCccc-e-EEEec-----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV---------------------HGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~---------------------~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      +.|+|..+++|||+ |+               |+|                     +|. .+..|+. + |||+|     
T Consensus       118 l~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilye  197 (337)
T d1o6la_         118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  197 (337)
T ss_dssp             HHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHH
T ss_pred             hhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHH
Confidence            99999999999996 66               333                     332 5667999 9 99999     


Q ss_pred             -------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q psy1684         119 -------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQW  170 (189)
Q Consensus       119 -------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~  170 (189)
                             |.+.+..++...+..+. ++.|..+++++.+||.+||+.||++||+     +++|++
T Consensus       198 ml~G~~pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         198 MMCGRLPFYNQDHERLFELILMEE-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHCCCCCCCcCHHHHHHHHhcCC-CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence                   77778888888887764 6778899999999999999999999995     777765

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.69  E-value=2.1e-19  Score=131.56  Aligned_cols=141  Identities=13%  Similarity=0.020  Sum_probs=106.4

Q ss_pred             hHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCCceee
Q psy1684           8 RIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADGLCVN   87 (189)
Q Consensus         8 ~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~gl~~~   87 (189)
                      |+|++++++........|||+|++++ |+    +..                 ++.....++..+...+..++..|+.++
T Consensus        69 hpnIv~~~~~~~~~~~~~ivmE~~~~-g~----L~~-----------------~l~~~~~l~e~~~~~~~~qi~~al~~l  126 (277)
T d1phka_          69 HPNIIQLKDTYETNTFFFLVFDLMKK-GE----LFD-----------------YLTEKVTLSEKETRKIMRALLEVICAL  126 (277)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTT-CB----HHH-----------------HHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeecccCcceEEEEEcCCC-ch----HHH-----------------HHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            78888888877777777888888876 32    211                 233234455777778888999999999


Q ss_pred             ccCCcccccc-cc---------------cccccC---------------------------CCCCccc-e-EEEec----
Q psy1684          88 LRKPCVQVSC-RI---------------YLVHGT---------------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        88 ~~~~~~~~~~-p~---------------~l~~~~---------------------------~~~~~~~-s-VwsfG----  118 (189)
                      |..+++|||+ |+               |++...                           ....++. + |||+|    
T Consensus       127 H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvily  206 (277)
T d1phka_         127 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY  206 (277)
T ss_dssp             HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred             HHcCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhh
Confidence            9999999996 66               222111                           3445888 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCC-CCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         119 --------SGGMTNAEVLHQVEHGY-RMPC--PPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~-~~~~--p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                              |.+.+..++...+.++. .++.  +..+|+++.+|+.+||+.||++|||++||++
T Consensus       207 eml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         207 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                    78888888888886664 3333  3479999999999999999999999999865

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.4e-17  Score=101.05  Aligned_cols=78  Identities=23%  Similarity=0.294  Sum_probs=66.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYSK   79 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~~   79 (189)
                      ||||.|+|.+|+++|    ..+|+||||++.+.+|.|+||++.  .+.+.|++|....++|..+...|. +.+||+||.+
T Consensus         9 WyhG~i~R~~Ae~lL----~~~G~FLVR~S~~~~g~~vLSv~~--~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~   82 (104)
T d1mila_           9 WFHGKLSRREAEALL----QLNGDFLVRESTTTPGQYVLTGLQ--SGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMD   82 (104)
T ss_dssp             TBCSSCCHHHHHTTC----CSTTEEEEEECCSSCSSEEEEEEE--TTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHH----hcCCcEEEEecCCCCCCEEEEEEE--ccccceEEEEeCCCEEEeCCeeECCHHHHHHHHhh
Confidence            999999999999988    357999999999888999999999  999999999765444555567888 9999999988


Q ss_pred             ccCCc
Q psy1684          80 DADGL   84 (189)
Q Consensus        80 ~a~gl   84 (189)
                      ...++
T Consensus        83 ~~~~~   87 (104)
T d1mila_          83 NHLPI   87 (104)
T ss_dssp             HTCCE
T ss_pred             CCCCc
Confidence            65443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=6.3e-19  Score=131.33  Aligned_cols=144  Identities=10%  Similarity=0.010  Sum_probs=110.6

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.....+..|+|+|++.+ |.+    ..                 ++.....+.......+..+++.|
T Consensus        59 ~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g-g~l----~~-----------------~~~~~~~~~~~~~~~~~~qi~~a  116 (316)
T d1fota_          59 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEG-GEL----FS-----------------LLRKSQRFPNPVAKFYAAEVCLA  116 (316)
T ss_dssp             HSCCBTTBCCEEEEEECSSEEEEEECCCCS-CBH----HH-----------------HHHHTSSCCHHHHHHHHHHHHHH
T ss_pred             HhccCcChhheeeeEeeCCeeeeEeeecCC-ccc----cc-----------------cccccccccccHHHHHHHHHHHh
Confidence            457899999998887777788999998876 311    11                 12223334445555677788999


Q ss_pred             ceeeccCCcccccc-cc---------------------------------cccccC-CCCCccc-e-EEEec--------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------------------------YLVHGT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------------------------~l~~~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +.++|..+++|||+ |+                                 ++|||. .+..|+. + |||+|        
T Consensus       117 l~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemlt  196 (316)
T d1fota_         117 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA  196 (316)
T ss_dssp             HHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH
T ss_pred             hhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHh
Confidence            99999999999996 66                                 223333 5567999 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRP-----TFETLQW  170 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP-----~~~~i~~  170 (189)
                          |.+.+..++...+.++. .+.|+.+|+++.+++.+||..||.+|+     |+++|++
T Consensus       197 G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         197 GYTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             SSCTTCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCCCcCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence                78888888988887774 457788999999999999999999996     8888876

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.2e-19  Score=133.31  Aligned_cols=147  Identities=12%  Similarity=0.000  Sum_probs=101.4

Q ss_pred             CCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccC
Q psy1684           3 FGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDAD   82 (189)
Q Consensus         3 ~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~   82 (189)
                      +..++|+|++++++.+......+||+|++.+ |+    +..                 ++.....+....+..+..+.+.
T Consensus        58 l~~l~HpnIv~l~~~~~~~~~~~iVmEy~~g-g~----L~~-----------------~l~~~~~l~~~~~~~~~~qil~  115 (322)
T d1s9ja_          58 LHECNSPYIVGFYGAFYSDGEISICMEHMDG-GS----LDQ-----------------VLKKAGRIPEQILGKVSIAVIK  115 (322)
T ss_dssp             GGGCCCTTBCCEEEEEECSSEEEEEEECCTT-EE----HHH-----------------HHHHHSSCCHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCC-Cc----HHH-----------------HHhhcCCCCHHHHHHHHHHHHH
Confidence            4568899999999888777778999998876 31    222                 2322334556667778889999


Q ss_pred             CceeeccC-Ccccccc-cc---------------ccc-------------------ccC-CCCCccc-e-EEEec-----
Q psy1684          83 GLCVNLRK-PCVQVSC-RI---------------YLV-------------------HGT-NLSGVVV-S-AVDFG-----  118 (189)
Q Consensus        83 gl~~~~~~-~~~~~~~-p~---------------~l~-------------------~~~-~~~~~~~-s-VwsfG-----  118 (189)
                      |+.|+|.+ +++|||+ |+               |+|                   ||. .+..|+. + |||+|     
T Consensus       116 aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~e  195 (322)
T d1s9ja_         116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE  195 (322)
T ss_dssp             HHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHH
Confidence            99999975 8999996 66               222                   222 4567999 9 99999     


Q ss_pred             -------CCCCChHH------------------------------------------HHHHHHcCCCCCCCC-CCCHHHH
Q psy1684         119 -------SGGMTNAE------------------------------------------VLHQVEHGYRMPCPP-GCPPRLY  148 (189)
Q Consensus       119 -------~~~~~~~~------------------------------------------~~~~v~~g~~~~~p~-~~p~~~~  148 (189)
                             |.+.+..+                                          ....+.....+..|. ..+.++.
T Consensus       196 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  275 (322)
T d1s9ja_         196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ  275 (322)
T ss_dssp             HHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHH
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHH
Confidence                   43322111                                          111122222222332 3578999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q psy1684         149 DIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       149 ~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +|+.+||..||++|||++|+++.
T Consensus       276 dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         276 DFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHcCCChhHCcCHHHHhhC
Confidence            99999999999999999999873

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.67  E-value=1.4e-16  Score=99.89  Aligned_cols=87  Identities=28%  Similarity=0.332  Sum_probs=69.7

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-cc-CCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QK-AGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl-~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|.  ...+|+||||.+. ..+.|+||++.  .+.+.|++|....+| |+ .....|. +.+||+||
T Consensus        11 Wy~g~isR~eAe~lL~--~~~~G~FLVR~S~-~~~~y~Lsv~~--~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y   85 (107)
T d1qada_          11 WNVGSSNRNKAENLLR--GKRDGTFLVRESS-KQGCYACSVVV--DGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY   85 (107)
T ss_dssp             TEEEECCHHHHHHHHT--TCCTTEEEEEEC----CCEEEEEEE--TTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHc--CCCCCcEEEEecC-CCCCEEEEEEe--cCCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHH
Confidence            9999999999999994  4578999999995 46889999999  999999999998888 44 4456688 99999999


Q ss_pred             hhcc-----CCceeeccCCc
Q psy1684          78 SKDA-----DGLCVNLRKPC   92 (189)
Q Consensus        78 ~~~a-----~gl~~~~~~~~   92 (189)
                      .++.     .++...+..|+
T Consensus        86 ~~~~l~~~~~~l~~~L~~Pv  105 (107)
T d1qada_          86 QHTSLVQHNDSLNVTLAYPV  105 (107)
T ss_dssp             HHSCGGGTCTTCCCCCCEET
T ss_pred             HhCccccccCCCceEccccc
Confidence            8764     35555554443

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=9.2e-17  Score=101.51  Aligned_cols=89  Identities=21%  Similarity=0.239  Sum_probs=72.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCC----CCcC-HhHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGR----TTIH-YPELV   74 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~----~~~~-l~~li   74 (189)
                      ||||.|+|.+|+++|.  ...+|+||||++.+..+.|+||++.  .+.++|++|.+.+++ ++...    ..|. +.+||
T Consensus        13 Wy~g~isR~~Ae~lL~--~~~~GtFLVR~S~~~~~~~~LSv~~--~~~v~H~~I~~~~~~~~l~~~~~~~~~F~sl~~LV   88 (112)
T d2izva2          13 CYWGVMDKYAAEALLE--GKPEGTFLLRDSAQEDYLFSVSFRR--YSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLL   88 (112)
T ss_dssp             TEEEECCHHHHHHHHT--TCCTTEEEEEECSSTTCSEEEEEEE--TTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHH
T ss_pred             CcCCCCCHHHHHHHHc--cCCCCcEEEeecCCCCCCeEEEEEe--cCCceEEEEEEeCCeEEEeecccCcccCCCHHHHH
Confidence            9999999999999995  3468999999999888999999999  999999999987766 55432    2577 99999


Q ss_pred             HHhhhccCCc--eeeccCCcc
Q psy1684          75 EHYSKDADGL--CVNLRKPCV   93 (189)
Q Consensus        75 ~~~~~~a~gl--~~~~~~~~~   93 (189)
                      +||++...++  ..+++.||+
T Consensus        89 ~~Y~~~~~~~~~~~llt~P~~  109 (112)
T d2izva2          89 EHYKDPSACMFFEPLLSTPLI  109 (112)
T ss_dssp             HHTCCGGGCCTTSCCCCEECC
T ss_pred             HHHhcccccccCccccCCCCC
Confidence            9998876543  344566654

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.8e-16  Score=98.87  Aligned_cols=91  Identities=31%  Similarity=0.489  Sum_probs=73.4

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec--------CCCeeeEEEEEeccCC-ccCCCCCcC-H
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR--------SSFCLKMTTGRSLFET-QKAGRTTIH-Y   70 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~--------~~~~v~h~~i~~~~~g-yl~~~~~~~-l   70 (189)
                      ||||.|+|.+|+++|..+. .+|+||||++.+.+|.|+||++..        ..+.+.|+.|...+++ ++.+...|. +
T Consensus         2 WyhG~i~R~~Ae~lL~~~~-~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~F~sl   80 (108)
T d2shpa3           2 WFHGHLSGKEAEKLLTEKG-KHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSL   80 (108)
T ss_dssp             TBCCSCCHHHHHHHHHHTC-CTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSH
T ss_pred             CCcCCCCHHHHHHHHhhcC-CCCeEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCCCceEeCCCcccCCH
Confidence            9999999999999995432 579999999998889999999973        2356889999877777 787788899 9


Q ss_pred             hHHHHHhhhc----cCCceeeccCCc
Q psy1684          71 PELVEHYSKD----ADGLCVNLRKPC   92 (189)
Q Consensus        71 ~~li~~~~~~----a~gl~~~~~~~~   92 (189)
                      .+|++||+++    .+|+...+..||
T Consensus        81 ~~LV~~y~~~~l~~~~g~~~~L~~Pv  106 (108)
T d2shpa3          81 TDLVEHYKKNPMVETLGTVLQLKQPL  106 (108)
T ss_dssp             HHHHHHHHHSCCBCTTSCBCCCCEEC
T ss_pred             HHHHHHHhhCCCCCCCCceEEcCCCC
Confidence            9999999876    345555555443

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.66  E-value=1.9e-17  Score=99.81  Aligned_cols=76  Identities=21%  Similarity=0.296  Sum_probs=63.3

Q ss_pred             CCCCCCChHHHHHHhcCCC-CCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPE-NDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~-~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|..|+++|.... ..+|+||||++.+..|.|+||++.  .+.++|++|.+..+| ++.+...|. +.+||+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~--~~~v~h~~I~~~~~~~~~~~~~~F~sl~~LV~~y   84 (86)
T d1rpya_           7 WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNF--QGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHF   84 (86)
T ss_dssp             TBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEE--TTEEEEEEC----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEE--CCceEEEEEEEcCCceEEeCCCeeCCHHHHHHhh
Confidence            9999999999999996543 467999999998888999999999  999999999998888 655566788 99999988


Q ss_pred             h
Q psy1684          78 S   78 (189)
Q Consensus        78 ~   78 (189)
                      .
T Consensus        85 ~   85 (86)
T d1rpya_          85 H   85 (86)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.9e-16  Score=97.23  Aligned_cols=90  Identities=28%  Similarity=0.307  Sum_probs=75.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC--ccCC-CCCcC-HhHHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET--QKAG-RTTIH-YPELVEH   76 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g--yl~~-~~~~~-l~~li~~   76 (189)
                      ||||.|+|.+|+++|..  ..+|+||||.+....+ |+|+++.  .+.++|+.|....+|  ++.+ ...|. +.+||+|
T Consensus        11 Wy~g~isR~eAe~lL~~--~~~G~FLvR~S~~~~~-y~Lsv~~--~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~   85 (106)
T d2cs0a1          11 WFHGAISREDAENLLES--QPLGSFLIRVSHSHVG-YTLSYKA--QSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTF   85 (106)
T ss_dssp             SBCSSCCHHHHHHHHHT--SCTTCEEEEECSSSSS-EEEEECC--SSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHH
T ss_pred             CccCCCCHHHHHHHHcC--CCCCcEEEEecCCCCC-EEEEEEe--cCCceeEEEEEcCCCCEEEecCCccCCCHHHHHHH
Confidence            99999999999999964  4689999999987655 9999999  999999999988888  4543 34678 9999999


Q ss_pred             hhhccC-CceeeccCCcccc
Q psy1684          77 YSKDAD-GLCVNLRKPCVQV   95 (189)
Q Consensus        77 ~~~~a~-gl~~~~~~~~~~~   95 (189)
                      |++... ++...+..||...
T Consensus        86 y~~~~~~~~~~~L~~P~~~~  105 (106)
T d2cs0a1          86 HQQKPIEPRRELLTQPCRQK  105 (106)
T ss_dssp             HTTSCCSSCCCCCCSBCCCS
T ss_pred             HHHCCCCCccCcccCcCCCC
Confidence            998754 7777777787653

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.65  E-value=1.2e-18  Score=132.09  Aligned_cols=144  Identities=9%  Similarity=-0.088  Sum_probs=100.9

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..+.|+|++++++.....+..|||+|++.++.     +..                 ++.....+...+...+..+++.|
T Consensus        62 ~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~-----L~~-----------------~l~~~~~~~e~~~~~~~~qi~~a  119 (364)
T d1omwa3          62 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGD-----LHY-----------------HLSQHGVFSEADMRFYAAEIILG  119 (364)
T ss_dssp             SSSCCTTBCCEEEEEECSSEEEEEECCCCSCB-----HHH-----------------HHHHHCSCCHHHHHHHHHHHHHH
T ss_pred             hcCCCCcEEEEEEEEEECCEEEEEEEecCCCc-----HHH-----------------HHHhcccccHHHHHHHHHHHHHH
Confidence            34568888888777666667788888877632     111                 23223344456677788889999


Q ss_pred             ceeeccCCcccccc-cc---------------ccc-------------------ccC-C-CCCccc-e-EEEec------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLV-------------------HGT-N-LSGVVV-S-AVDFG------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~-------------------~~~-~-~~~~~~-s-VwsfG------  118 (189)
                      +.++|..+++|||+ |+               |+|                   ||. . ...|+. + |||+|      
T Consensus       120 L~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyem  199 (364)
T d1omwa3         120 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL  199 (364)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHH
Confidence            99999999999996 66               333                   222 3 345899 9 99999      


Q ss_pred             ------CCCCChH---HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q psy1684         119 ------SGGMTNA---EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-----FETLQW  170 (189)
Q Consensus       119 ------~~~~~~~---~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-----~~~i~~  170 (189)
                            |.+.+..   ++...+ ....++.|..+++++.+||.+||+.||++|||     +++|++
T Consensus       200 ltG~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         200 LRGHSPFRQHKTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHSSCSSCSSCSSCHHHHHHHS-SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HhCCCCCCCCCHHHHHHHHHhc-ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence                  5544332   232222 23345667889999999999999999999999     577765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=2.2e-18  Score=130.01  Aligned_cols=144  Identities=8%  Similarity=-0.035  Sum_probs=105.3

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++........++|++++.++. +    ..                 ++.....++...+..+..+.+.|
T Consensus        96 ~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~-l----~~-----------------~l~~~~~l~e~~~~~i~~qi~~a  153 (350)
T d1rdqe_          96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE-M----FS-----------------HLRRIGRFSEPHARFYAAQIVLT  153 (350)
T ss_dssp             TTCCCTTBCCEEEEEECSSEEEEEEECCTTCB-H----HH-----------------HHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHcCCCcEeecccccccccccccccccccccc-h----hh-----------------hHhhcCCCCHHHHHHHHHHHHHH
Confidence            34566666666655554555566666655422 0    01                 33333445566777788899999


Q ss_pred             ceeeccCCcccccc-cc---------------cccc------------------cC-CCCCccc-e-EEEec--------
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVH------------------GT-NLSGVVV-S-AVDFG--------  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~------------------~~-~~~~~~~-s-VwsfG--------  118 (189)
                      +.++|..+++|||+ |+               |+|+                  |. .+..|+. + |||+|        
T Consensus       154 L~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemlt  233 (350)
T d1rdqe_         154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA  233 (350)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHh
Confidence            99999999999996 66               3322                  22 5667999 9 99999        


Q ss_pred             ----CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCC-----CCHHHHHH
Q psy1684         119 ----SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKR-----PTFETLQW  170 (189)
Q Consensus       119 ----~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~R-----P~~~~i~~  170 (189)
                          |.+.+..+++..+..+. +..|..+++++.+|+.+||..||++|     ||+++|++
T Consensus       234 G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         234 GYPPFFADQPIQIYEKIVSGK-VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             SSCSSCCSSHHHHHHHHHHCC-CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCCCcCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence                77888888888887774 55678999999999999999999999     48999876

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.9e-18  Score=126.11  Aligned_cols=145  Identities=12%  Similarity=-0.034  Sum_probs=102.4

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++....++..+||+|++.. +.+    ..                 ....+..++..++..+..+++.|
T Consensus        55 ~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~-~~~----~~-----------------~~~~~~~l~~~~~~~~~~qil~a  112 (299)
T d1ua2a_          55 QELSHPNIIGLLDAFGHKSNISLVFDFMET-DLE----VI-----------------IKDNSLVLTPSHIKAYMLMTLQG  112 (299)
T ss_dssp             HHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHH----HH-----------------HTTCCSSCCSSHHHHHHHHHHHH
T ss_pred             HhCCCCCEeEEEeeeccCCceeehhhhhcc-hHH----hh-----------------hhhcccCCCHHHHHHHHHHHHHH
Confidence            356788999988888777788888888765 210    00                 12223345556667778888999


Q ss_pred             ceeeccCCcccccc-cc---------------cccccC-----------------------CCCCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------NLSGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------~~~~~~~-s-VwsfG----  118 (189)
                      +.++|...++|||+ |+               |++...                       ....|+. + |||+|    
T Consensus       113 L~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~  192 (299)
T d1ua2a_         113 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA  192 (299)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred             HHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHH
Confidence            99999999999996 66               333221                       2345788 9 99999    


Q ss_pred             --------CCCCChHHHHHHHHcCCC----------------------CCC-----CCCCCHHHHHHHHHhcccCCCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEHGYR----------------------MPC-----PPGCPPRLYDIMLECWLKDPVKRP  163 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~g~~----------------------~~~-----p~~~p~~~~~l~~~C~~~~p~~RP  163 (189)
                              |.+.+..+.+..+.+...                      +..     .+..++++.+|+.+|++.||++||
T Consensus       193 el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~  272 (299)
T d1ua2a_         193 ELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI  272 (299)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSC
T ss_pred             HHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCc
Confidence                    777777776666532110                      000     125678999999999999999999


Q ss_pred             CHHHHHH
Q psy1684         164 TFETLQW  170 (189)
Q Consensus       164 ~~~~i~~  170 (189)
                      |++|+++
T Consensus       273 sa~e~L~  279 (299)
T d1ua2a_         273 TATQALK  279 (299)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhC
Confidence            9999986

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.4e-15  Score=94.63  Aligned_cols=87  Identities=30%  Similarity=0.444  Sum_probs=69.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccC----------------
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKA----------------   63 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~----------------   63 (189)
                      ||||.|+|++|+++|.  ...+|+||||++....+.|+||++.  .+.+.|++|....++ ++.                
T Consensus         2 Wy~g~isR~~Ae~lL~--~~~~G~FLVR~S~~~~~~~~LS~~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (109)
T d2eyva1           2 WYWGRLSRQEAVALLQ--GQRHGVFLVRDSSTSPGDYVLSVSE--NSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLR   77 (109)
T ss_dssp             SCCBCCCHHHHHHHCS--SCSTTCEEEECCCSSSSCEEEEEEE--TTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEE
T ss_pred             CCCCCCCHHHHHHHhc--CCCCCeEEeeecCCCCCCEEEEEEE--CCEEEEEEEEEcCCcceeeccccccccccccceEE
Confidence            9999999999999884  3468999999998888999999999  999999999987766 221                


Q ss_pred             -CCCCcC-HhHHHHHhhhccCCceeeccCCc
Q psy1684          64 -GRTTIH-YPELVEHYSKDADGLCVNLRKPC   92 (189)
Q Consensus        64 -~~~~~~-l~~li~~~~~~a~gl~~~~~~~~   92 (189)
                       +...|. +.+||+||+.+..+. ..+..||
T Consensus        78 ~~~~~F~sl~~LV~~y~~~~l~~-~~L~~P~  107 (109)
T d2eyva1          78 IGDQEFDSLPALLEFYKIHYLDT-TTLIEPV  107 (109)
T ss_dssp             ETTEEESSHHHHHHHSSSSCSSS-SCCCSBC
T ss_pred             eCCeeeCCHHHHHHHHhhCcCCC-CccCCcC
Confidence             123577 999999998765432 2344454

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=3.9e-16  Score=98.58  Aligned_cols=89  Identities=30%  Similarity=0.427  Sum_probs=73.6

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCC-CCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHHHh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESR-KNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVEHY   77 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~-~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~~~   77 (189)
                      ||||.|+|.+|+++|..  ..+|+||||++.+. ++.|++++..  .+.+.|++|...+++ ++.+...|. +.+||++|
T Consensus        13 WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~~~~~~ls~~~--~~~~~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y   88 (111)
T d1fu6a_          13 WYWGDISREEVNEKLRD--TADGTFLVRDASTKMHGDYTLTLRK--GGNNKSIKIFHRDGKYGFSDPLTFNSVVELINHY   88 (111)
T ss_dssp             SCCSSCCSHHHHHHSSS--CSSCCCCCBSSCCSSSCCSBCEEEE--TTEEEECCCCCTTTCCCTTTTSCCCCTTHHHHHH
T ss_pred             CCCCCCCHHHHHHHhCc--CCCCEEEEEeccCCCCccEEEEEec--CCceEEEEEEEcCCeEEECCCcccCCHHHHHHHH
Confidence            99999999999999954  35899999998765 4679999999  999999999877666 777777888 99999999


Q ss_pred             hhcc-----CCceeeccCCcc
Q psy1684          78 SKDA-----DGLCVNLRKPCV   93 (189)
Q Consensus        78 ~~~a-----~gl~~~~~~~~~   93 (189)
                      .+..     .++...+..||.
T Consensus        89 ~~~~l~~~~~~l~~~L~~Pv~  109 (111)
T d1fu6a_          89 RNESLAQYNPKLDVKLLYPVS  109 (111)
T ss_dssp             HTTCSTTTCSSCCCCSCCCCC
T ss_pred             hhCcCCccCCCCccccCcccc
Confidence            8764     355666666664

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.4e-15  Score=93.61  Aligned_cols=77  Identities=25%  Similarity=0.290  Sum_probs=65.0

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-cc-------CCCCCcC-Hh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QK-------AGRTTIH-YP   71 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl-------~~~~~~~-l~   71 (189)
                      ||||.|+|..|+++|.  ..++|+||||++...++.|+||++.  .+.++|++|....++ .+       .....|. +.
T Consensus        17 Wy~g~i~R~~Ae~~L~--~~~~GtFLVR~S~~~~~~~~LSv~~--~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~   92 (103)
T d2c9wa2          17 WYWGSMTVNEAKEKLK--EAPEGTFLIRDSSHSDYLLTISVKT--SAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVV   92 (103)
T ss_dssp             CBCTTCCHHHHHHHHT--TSCTTCEEEEECCSTTCSEEEEEEE--TTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHH
T ss_pred             CcCCCCCHHHHHHHhc--CCCCCceEEeccCCCCCCEEEEEEE--CCEEEEEEEEEcCCeEeeCCccccccCCCccCCHH
Confidence            9999999999999995  4478999999999988999999999  999999999876654 22       2234688 99


Q ss_pred             HHHHHhhhcc
Q psy1684          72 ELVEHYSKDA   81 (189)
Q Consensus        72 ~li~~~~~~a   81 (189)
                      +||+||.+.+
T Consensus        93 ~LI~~y~~~s  102 (103)
T d2c9wa2          93 HLIDYYVQMC  102 (103)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHhhC
Confidence            9999998653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=3.5e-16  Score=115.43  Aligned_cols=119  Identities=13%  Similarity=0.108  Sum_probs=84.5

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-ccc------------------ccccC--------------------
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIY------------------LVHGT--------------------  105 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~------------------l~~~~--------------------  105 (189)
                      ...++...+..+..+.+.|+.++|...++|||+ |+.                  +|+..                    
T Consensus        97 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt  176 (299)
T d1ckia_          97 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  176 (299)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCC
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCC
Confidence            445667778888899999999999999999996 662                  22110                    


Q ss_pred             ---------CCCCccc-e-EEEec------------CCCCChHHHHHHH----HcCCCCC---CCCCCCHHHHHHHHHhc
Q psy1684         106 ---------NLSGVVV-S-AVDFG------------SGGMTNAEVLHQV----EHGYRMP---CPPGCPPRLYDIMLECW  155 (189)
Q Consensus       106 ---------~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v----~~g~~~~---~p~~~p~~~~~l~~~C~  155 (189)
                               .+..|+. + |||||            |.+....+....+    ......+   .+..+|+++.+||..||
T Consensus       177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl  256 (299)
T d1ckia_         177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  256 (299)
T ss_dssp             SSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             ccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHc
Confidence                     3445899 9 99999            5555443332222    1111122   34689999999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q psy1684         156 LKDPVKRPTFETLQWKLEDFFTMEGSDY  183 (189)
Q Consensus       156 ~~~p~~RP~~~~i~~~l~~~~~~~~~~~  183 (189)
                      +.||++||+|++|.+.|+.++....-.+
T Consensus       257 ~~~p~~RP~~~~i~~~l~~~~~~~~~~~  284 (299)
T d1ckia_         257 SLRFDDKPDYSYLRQLFRNLFHRQGFSY  284 (299)
T ss_dssp             HSCTTCCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             cCChhHCcCHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999877654444

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.1e-17  Score=125.42  Aligned_cols=104  Identities=10%  Similarity=0.050  Sum_probs=72.7

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------------------------------cccccC-C
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------------------------YLVHGT-N  106 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------------------------~l~~~~-~  106 (189)
                      .++..+...+..+.+.|+.|+|..+++|||+ |+                                      ++|||. .
T Consensus       107 ~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  186 (335)
T d2ozaa1         107 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG  186 (335)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHc
Confidence            4556677788889999999999999999996 66                                      222222 3


Q ss_pred             CCCccc-e-EEEec------------CCCCChHHHHHH----HHcCC-CCCCC--CCCCHHHHHHHHHhcccCCCCCCCH
Q psy1684         107 LSGVVV-S-AVDFG------------SGGMTNAEVLHQ----VEHGY-RMPCP--PGCPPRLYDIMLECWLKDPVKRPTF  165 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~~~~~~~~~~----v~~g~-~~~~p--~~~p~~~~~l~~~C~~~~p~~RP~~  165 (189)
                      ...|+. + |||+|            |.+.+..++...    +..+. ..+.|  ..+++++.+|+.+|++.||++|||+
T Consensus       187 ~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~  266 (335)
T d2ozaa1         187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  266 (335)
T ss_dssp             GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCH
Confidence            445899 9 99999            444333333332    22222 12222  3588999999999999999999999


Q ss_pred             HHHHH
Q psy1684         166 ETLQW  170 (189)
Q Consensus       166 ~~i~~  170 (189)
                      .|+++
T Consensus       267 ~eil~  271 (335)
T d2ozaa1         267 TEFMN  271 (335)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            99976

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.55  E-value=7.1e-17  Score=118.49  Aligned_cols=106  Identities=12%  Similarity=0.058  Sum_probs=77.4

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-ccccc--ccC------------------------------------
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYLV--HGT------------------------------------  105 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l~--~~~------------------------------------  105 (189)
                      ...++......+..+++.|+.++|..+++|||+ |+.+.  .+.                                    
T Consensus        94 ~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~  173 (286)
T d1ob3a_          94 EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM  173 (286)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHT
T ss_pred             cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHh
Confidence            445667777788899999999999999999996 66221  111                                    


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCC--------------------------CCCCCCC
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR--------------------------MPCPPGC  143 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~--------------------------~~~p~~~  143 (189)
                      ....++. + |||+|            |.+.+..+.+..+..  |..                          ...+..+
T Consensus       174 ~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T d1ob3a_         174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL  253 (286)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSC
T ss_pred             CCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccC
Confidence            2345788 9 99999            777776666555421  110                          0123467


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++++.+|+.+|++.||++|||++|+++
T Consensus       254 s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         254 DESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            889999999999999999999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.7e-17  Score=121.02  Aligned_cols=104  Identities=14%  Similarity=0.091  Sum_probs=78.7

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------------------------cccccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------------------------YLVHGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------------------------~l~~~~-~~~~  109 (189)
                      .++...+..+..+.+.|+.++|..+++|||+ |+                                   ++|||. ....
T Consensus       112 ~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~  191 (305)
T d1blxa_         112 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS  191 (305)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCC
Confidence            3445666678889999999999999999996 66                                   223332 5677


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHc--CCC------------------------CCCCCCCCHHHHH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYR------------------------MPCPPGCPPRLYD  149 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~------------------------~~~p~~~p~~~~~  149 (189)
                      |+. + |||+|            |.+.+..+.+..+.+  |..                        ...+...++++.+
T Consensus       192 y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  271 (305)
T d1blxa_         192 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD  271 (305)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred             CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHH
Confidence            999 9 99999            777777766655522  110                        0123467889999


Q ss_pred             HHHHhcccCCCCCCCHHHHHH
Q psy1684         150 IMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       150 l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      |+.+||+.||++|||++|+++
T Consensus       272 li~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         272 LLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHCcCChhHCcCHHHHhc
Confidence            999999999999999999876

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.6e-17  Score=120.80  Aligned_cols=147  Identities=13%  Similarity=0.075  Sum_probs=95.0

Q ss_pred             CCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcCHhHHHHHhhhccCC
Q psy1684           4 GKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIHYPELVEHYSKDADG   83 (189)
Q Consensus         4 g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~l~~li~~~~~~a~g   83 (189)
                      ..++|+|++++++.....+..+||+|++.. +.+.+.                    .......+...++..+..+.+.|
T Consensus        56 ~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~--------------------~~~~~~~l~e~~~~~~~~qil~~  114 (298)
T d1gz8a_          56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--------------------DASALTGIPLPLIKSYLFQLLQG  114 (298)
T ss_dssp             TTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH--------------------HHTTTTCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCCcEEEeccccccccceeEEEeecCC-chhhhh--------------------hhhcccCCCHHHHHHHHHHHHHH
Confidence            456677777766655555555666666543 100000                    11123345567778888999999


Q ss_pred             ceeeccCCcccccc-ccc---------------cc---------------------ccC-CC-CCccc-e-EEEec----
Q psy1684          84 LCVNLRKPCVQVSC-RIY---------------LV---------------------HGT-NL-SGVVV-S-AVDFG----  118 (189)
Q Consensus        84 l~~~~~~~~~~~~~-p~~---------------l~---------------------~~~-~~-~~~~~-s-VwsfG----  118 (189)
                      +.++|..+++|||+ |+.               +|                     +|. .. ..++. + |||+|    
T Consensus       115 L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily  194 (298)
T d1gz8a_         115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA  194 (298)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhh
Confidence            99999999999996 661               11                     111 23 33577 8 99999    


Q ss_pred             --------CCCCChHHHHHHHHc--CC---------------CCCCC-----------CCCCHHHHHHHHHhcccCCCCC
Q psy1684         119 --------SGGMTNAEVLHQVEH--GY---------------RMPCP-----------PGCPPRLYDIMLECWLKDPVKR  162 (189)
Q Consensus       119 --------~~~~~~~~~~~~v~~--g~---------------~~~~p-----------~~~p~~~~~l~~~C~~~~p~~R  162 (189)
                              |.+.+..+.+..+.+  |.               ....|           ..+++++.+|+.+|+..||++|
T Consensus       195 ~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R  274 (298)
T d1gz8a_         195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR  274 (298)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHC
Confidence                    677776666555421  11               00011           2456889999999999999999


Q ss_pred             CCHHHHHHH
Q psy1684         163 PTFETLQWK  171 (189)
Q Consensus       163 P~~~~i~~~  171 (189)
                      ||++|+++.
T Consensus       275 ~t~~ell~H  283 (298)
T d1gz8a_         275 ISAKAALAH  283 (298)
T ss_dssp             CCHHHHHTS
T ss_pred             cCHHHHhCC
Confidence            999999874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.5e-17  Score=120.25  Aligned_cols=101  Identities=12%  Similarity=0.039  Sum_probs=73.8

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------ccc-------------------ccC-CC
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLV-------------------HGT-NL  107 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~-------------------~~~-~~  107 (189)
                      ...+...+...+..+.+.|+.++|..+++|||+ |+                |+|                   +|. ..
T Consensus       104 ~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~  183 (273)
T d1xwsa_         104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY  183 (273)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcC
Confidence            345556667778889999999999999999996 66                222                   111 23


Q ss_pred             CC-ccc-e-EEEec----------CCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         108 SG-VVV-S-AVDFG----------SGGMTNAEVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       108 ~~-~~~-s-VwsfG----------~~~~~~~~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      .. ++. + |||+|          .+-....+    +.++ ....|..+|+++.+|+.+||+.||++|||++|+++
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~----i~~~-~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----IIRG-QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HHHC-CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCcccccccceeeehhHhhCCCCCCCchH----Hhhc-ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            34 467 8 99999          11112222    3334 34567889999999999999999999999999976

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=8.1e-16  Score=112.93  Aligned_cols=109  Identities=12%  Similarity=0.003  Sum_probs=76.1

Q ss_pred             cCCCCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC--------------------
Q psy1684          62 KAGRTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT--------------------  105 (189)
Q Consensus        62 l~~~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~--------------------  105 (189)
                      +.....+...++..+..+.+.|+.++|..+++|||+ |+               |++...                    
T Consensus        92 ~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe  171 (292)
T d1unla_          92 DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHH
T ss_pred             cccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhh
Confidence            333445556777788889999999999999999996 66               222211                    


Q ss_pred             --CCC-Cccc-e-EEEec-------------CCCCChHHHHHHHHc--CC--------------------------CCCC
Q psy1684         106 --NLS-GVVV-S-AVDFG-------------SGGMTNAEVLHQVEH--GY--------------------------RMPC  139 (189)
Q Consensus       106 --~~~-~~~~-s-VwsfG-------------~~~~~~~~~~~~v~~--g~--------------------------~~~~  139 (189)
                        ... .++. + |||+|             |.+.+..+.+..+..  +.                          ....
T Consensus       172 ~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (292)
T d1unla_         172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV  251 (292)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTT
T ss_pred             HhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhc
Confidence              233 3688 9 99999             344444555554421  11                          1112


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         140 PPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       140 p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      +...++++.+|+.+|++.||++|||++|+++
T Consensus       252 ~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            3456789999999999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.5e-15  Score=112.13  Aligned_cols=105  Identities=10%  Similarity=0.004  Sum_probs=75.3

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------c------------------ccccC--CCCCc
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------Y------------------LVHGT--NLSGV  110 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~------------------l~~~~--~~~~~  110 (189)
                      .++...+..+..+.+.|+.++|..+++|||+ |+               |                  +|+|.  ....+
T Consensus       117 ~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  196 (346)
T d1cm8a_         117 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY  196 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHcCCCCC
Confidence            4566677778889999999999999999996 66               2                  22222  23456


Q ss_pred             cc-e-EEEec------------CCCCChHHHHHHHHc--CC-------------------------C---CCCCCCCCHH
Q psy1684         111 VV-S-AVDFG------------SGGMTNAEVLHQVEH--GY-------------------------R---MPCPPGCPPR  146 (189)
Q Consensus       111 ~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~-------------------------~---~~~p~~~p~~  146 (189)
                      +. + |||+|            |.+.+..+.+..+..  +.                         .   ...+..++++
T Consensus       197 ~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  276 (346)
T d1cm8a_         197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL  276 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHH
T ss_pred             CccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHH
Confidence            88 8 99999            555555444433311  11                         0   0123467889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         147 LYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       147 ~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +.+|+.+|+..||++|||++|+++.
T Consensus       277 ~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         277 AVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcC
Confidence            9999999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=8.8e-16  Score=115.65  Aligned_cols=107  Identities=12%  Similarity=0.009  Sum_probs=76.8

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccccC----------------------
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVHGT----------------------  105 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~~~----------------------  105 (189)
                      ...++..++..+..+++.|+.++|..+++|||+ |+                |++...                      
T Consensus       116 ~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  195 (350)
T d1q5ka_         116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF  195 (350)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhh
Confidence            344556777778889999999999999999996 66                222111                      


Q ss_pred             CCCCccc-e-EEEec------------CCCCChHHHHHHHHc--CC----------------CCC----------CCCCC
Q psy1684         106 NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GY----------------RMP----------CPPGC  143 (189)
Q Consensus       106 ~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~----------------~~~----------~p~~~  143 (189)
                      ....|+. + |||+|            |.+.+..+.+..+.+  |.                ..+          ....+
T Consensus       196 ~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (350)
T d1q5ka_         196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT  275 (350)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTS
T ss_pred             cccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCC
Confidence            2345888 9 99999            666665555444321  10                000          12357


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         144 PPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       144 p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      ++++.+|+.+|+..||++|||++|+++.
T Consensus       276 s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         276 PPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            8899999999999999999999999863

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4e-16  Score=116.31  Aligned_cols=105  Identities=15%  Similarity=0.020  Sum_probs=73.3

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-----------------------
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------  105 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------  105 (189)
                      ...+.......+..+.+.|+.++|+.+++|||+ |+               |+++..                       
T Consensus       123 ~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~  202 (322)
T d1vzoa_         123 RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV  202 (322)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHH
T ss_pred             cccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHh
Confidence            334445556667778889999999999999996 55               333221                       


Q ss_pred             C--CCCccc-e-EEEec------------CCCCChH----HHHHHHHcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-
Q psy1684         106 N--LSGVVV-S-AVDFG------------SGGMTNA----EVLHQVEHGYRMPCPPGCPPRLYDIMLECWLKDPVKRPT-  164 (189)
Q Consensus       106 ~--~~~~~~-s-VwsfG------------~~~~~~~----~~~~~v~~g~~~~~p~~~p~~~~~l~~~C~~~~p~~RP~-  164 (189)
                      .  ...++. + |||+|            |.+.+..    ++...... ..++.|..+++++.+|+.+||+.||++||| 
T Consensus       203 ~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~  281 (322)
T d1vzoa_         203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDLIQRLLMKDPKKRLGC  281 (322)
T ss_dssp             TTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             hcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc-CCCCCcccCCHHHHHHHHHHcccCHHHcCCC
Confidence            2  234788 9 99999            5554332    33333223 356778899999999999999999999995 


Q ss_pred             ----HHHHHH
Q psy1684         165 ----FETLQW  170 (189)
Q Consensus       165 ----~~~i~~  170 (189)
                          ++|+++
T Consensus       282 ~~~t~~eil~  291 (322)
T d1vzoa_         282 GPRDADEIKE  291 (322)
T ss_dssp             STTTHHHHHT
T ss_pred             CcccHHHHHc
Confidence                677765

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.1e-13  Score=90.02  Aligned_cols=68  Identities=19%  Similarity=0.154  Sum_probs=56.8

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEecCCCeeeEEEEEeccCC-ccCCCCCcC-HhHHHH
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKRSSFCLKMTTGRSLFET-QKAGRTTIH-YPELVE   75 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~~~~~v~h~~i~~~~~g-yl~~~~~~~-l~~li~   75 (189)
                      ||||.|+|.+|+++|.   ..+|+||||+|.+..|.|+||++.  .+.++|++|.+. ++ |+. ...|. +.+|+.
T Consensus        37 wyhG~isR~eAe~lL~---~~dGsFLVR~S~~~~g~y~LSv~~--~~~v~H~~I~~~-g~~~~~-~~~F~sl~eLV~  106 (141)
T d1xa6a2          37 EFHGIISREQADELLG---GVEGAYILRESQRQPGCYTLALRF--GNQTLNYRLFHD-GKHFVG-EKRFESIHDLVT  106 (141)
T ss_dssp             SEEEECCHHHHHHHHC---SCTTBEEEEECSSSTTCEEEEEEE--TTEEEECCCEES-SSEECS-SSCCCCSSHHHH
T ss_pred             eeeccCCHHHHHHHHc---CCCCeEEEEecCCCCCCEEEEEEE--CCEEEEEEEEEC-CCEEEC-CCeECCHHHHHh
Confidence            9999999999999984   247999999998888999999999  999999999863 44 654 44687 777663

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.37  E-value=2.3e-13  Score=99.89  Aligned_cols=129  Identities=11%  Similarity=-0.034  Sum_probs=90.0

Q ss_pred             EEEEEeccCC----ccCC-CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc--------------------ccccc
Q psy1684          51 MTTGRSLFET----QKAG-RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI--------------------YLVHG  104 (189)
Q Consensus        51 h~~i~~~~~g----yl~~-~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~--------------------~l~~~  104 (189)
                      .+.+....+|    ++.. ...++......+..+.+.|+.++|..+++|||+ |+                    |+|+.
T Consensus        76 ~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          76 NVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             cEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            3445555544    3332 334667777788888899999999999999996 66                    22211


Q ss_pred             C-----------------------------CCCCccc-e-EEEec------------CCCCC---hHHHHHHHHcCC-CC
Q psy1684         105 T-----------------------------NLSGVVV-S-AVDFG------------SGGMT---NAEVLHQVEHGY-RM  137 (189)
Q Consensus       105 ~-----------------------------~~~~~~~-s-VwsfG------------~~~~~---~~~~~~~v~~g~-~~  137 (189)
                      .                             .+..++. + |||||            |.+.+   ..+....+.... ..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  235 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence            0                             4556899 9 99999            54433   333333332211 11


Q ss_pred             ---CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q psy1684         138 ---PCPPGCPPRLYDIMLECWLKDPVKRPTFETLQWKLEDFFTME  179 (189)
Q Consensus       138 ---~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~l~~~~~~~  179 (189)
                         ..+..+|+++.+||..||+.+|++||+++.|.+.|+++++..
T Consensus       236 ~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence               134679999999999999999999999999999999988754

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=9e-15  Score=110.26  Aligned_cols=105  Identities=12%  Similarity=0.052  Sum_probs=72.9

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc-----------------------------------cccccC-CCCC
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI-----------------------------------YLVHGT-NLSG  109 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~-----------------------------------~l~~~~-~~~~  109 (189)
                      .++..++..+..++..|+.++|..+++|||+ |+                                   +.|+|. .+..
T Consensus       115 ~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~  194 (355)
T d2b1pa1         115 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG  194 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCCC
Confidence            3456667778889999999999999999996 65                                   112222 5567


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcCCCCC---------------------C--------------C
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHGYRMP---------------------C--------------P  140 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g~~~~---------------------~--------------p  140 (189)
                      ++. + |||+|            |.+.+.......+......+                     .              +
T Consensus       195 ~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (355)
T d2b1pa1         195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP  274 (355)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSC
T ss_pred             CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccccc
Confidence            889 9 99999            66665544444332110000                     0              0


Q ss_pred             ------CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 ------PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ------~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                            ...++++.+|+.+|+..||++|||++|+++.
T Consensus       275 ~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         275 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                  0124577899999999999999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.31  E-value=1.3e-13  Score=102.76  Aligned_cols=105  Identities=11%  Similarity=-0.082  Sum_probs=70.8

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cc----------------cccccC----------------------C
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI----------------YLVHGT----------------------N  106 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~----------------~l~~~~----------------------~  106 (189)
                      ..++..++..+..++..|+.++|..+++|||+ |+                |+|...                      .
T Consensus       124 ~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD  203 (328)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccC
Confidence            35666777788899999999999999999996 66                222111                      2


Q ss_pred             CCCccc-e-EEEec------------CCC-CChHHHHHHHHc--C----------------------------------C
Q psy1684         107 LSGVVV-S-AVDFG------------SGG-MTNAEVLHQVEH--G----------------------------------Y  135 (189)
Q Consensus       107 ~~~~~~-s-VwsfG------------~~~-~~~~~~~~~v~~--g----------------------------------~  135 (189)
                      ...++. + |||+|            |.. .+..+....+..  |                                  .
T Consensus       204 ~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (328)
T d3bqca1         204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV  283 (328)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGC
T ss_pred             CCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcc
Confidence            344788 9 99999            222 222221111100  0                                  0


Q ss_pred             CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         136 RMPCPPGCPPRLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       136 ~~~~p~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ..+.+..+++++.+||.+|+..||++|||++|+++
T Consensus       284 ~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         284 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00111347789999999999999999999999876

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.6e-12  Score=96.24  Aligned_cols=107  Identities=16%  Similarity=0.074  Sum_probs=75.1

Q ss_pred             CCCcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cccccC-----------------------
Q psy1684          65 RTTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YLVHGT-----------------------  105 (189)
Q Consensus        65 ~~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l~~~~-----------------------  105 (189)
                      ...+.......+..+++.|+.++|..+++|||+ |+               |++...                       
T Consensus       111 ~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aP  190 (318)
T d3blha1         111 LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  190 (318)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCH
T ss_pred             ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhH
Confidence            445556677778889999999999999999996 66               222211                       


Q ss_pred             ---C-CCCccc-e-EEEec------------CCCCChHHHHHHHHc--CCCCCC-CC-----------------------
Q psy1684         106 ---N-LSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH--GYRMPC-PP-----------------------  141 (189)
Q Consensus       106 ---~-~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~--g~~~~~-p~-----------------------  141 (189)
                         . ...|+. + |||+|            |.+.+..+....+.+  +...+. ..                       
T Consensus       191 E~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T d3blha1         191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD  270 (318)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHH
T ss_pred             HHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchh
Confidence               2 335889 9 99999            667676665555432  111100 00                       


Q ss_pred             -----CCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         142 -----GCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       142 -----~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                           ...+++.+||.+|++.||++|||++|+++.
T Consensus       271 ~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         271 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             HHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence                 135677899999999999999999999853

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.6e-12  Score=97.42  Aligned_cols=105  Identities=14%  Similarity=0.004  Sum_probs=75.4

Q ss_pred             CCcCHhHHHHHhhhccCCceeeccCCcccccc-cccc---------------------------------cccC-CC-CC
Q psy1684          66 TTIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RIYL---------------------------------VHGT-NL-SG  109 (189)
Q Consensus        66 ~~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~~l---------------------------------~~~~-~~-~~  109 (189)
                      ..++..++..+..+++.|+.++|..+++|||+ |+.+                                 ++|. .. ..
T Consensus       116 ~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~  195 (348)
T d2gfsa1         116 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH  195 (348)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSC
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccccccCchhhcCCcc
Confidence            35666777778889999999999999999996 6611                                 1111 33 34


Q ss_pred             ccc-e-EEEec------------CCCCChHHHHHHHHcC--C----------------------CCC------CCCCCCH
Q psy1684         110 VVV-S-AVDFG------------SGGMTNAEVLHQVEHG--Y----------------------RMP------CPPGCPP  145 (189)
Q Consensus       110 ~~~-s-VwsfG------------~~~~~~~~~~~~v~~g--~----------------------~~~------~p~~~p~  145 (189)
                      ++. + |||+|            |.+.+.......+...  .                      +.+      ....+++
T Consensus       196 ~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  275 (348)
T d2gfsa1         196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP  275 (348)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCH
T ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCH
Confidence            677 8 99999            6666655554444221  1                      000      0135788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q psy1684         146 RLYDIMLECWLKDPVKRPTFETLQW  170 (189)
Q Consensus       146 ~~~~l~~~C~~~~p~~RP~~~~i~~  170 (189)
                      ++.+||.+|+..||++|||++|+++
T Consensus       276 ~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         276 LAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHhc
Confidence            9999999999999999999999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=9.3e-12  Score=93.14  Aligned_cols=105  Identities=14%  Similarity=0.088  Sum_probs=73.6

Q ss_pred             CcCHhHHHHHhhhccCCceeeccCCcccccc-cc---------------cc------------------------cccC-
Q psy1684          67 TIHYPELVEHYSKDADGLCVNLRKPCVQVSC-RI---------------YL------------------------VHGT-  105 (189)
Q Consensus        67 ~~~l~~li~~~~~~a~gl~~~~~~~~~~~~~-p~---------------~l------------------------~~~~-  105 (189)
                      .++..++..+..+...|+.++|..+++|||+ |+               |+                        |+|. 
T Consensus       105 ~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l  184 (345)
T d1pmea_         105 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  184 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHh
Confidence            4556777888899999999999999999996 66               22                        2221 


Q ss_pred             -CCCCccc-e-EEEec------------CCCCChHHHHHHHHc-------------------------CCC--CC---CC
Q psy1684         106 -NLSGVVV-S-AVDFG------------SGGMTNAEVLHQVEH-------------------------GYR--MP---CP  140 (189)
Q Consensus       106 -~~~~~~~-s-VwsfG------------~~~~~~~~~~~~v~~-------------------------g~~--~~---~p  140 (189)
                       ....++. + |||+|            |.+.+..+.......                         ...  .+   ..
T Consensus       185 ~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (345)
T d1pmea_         185 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF  264 (345)
T ss_dssp             TTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred             hcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhC
Confidence             3345788 8 99999            555554333322211                         000  00   12


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         141 PGCPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       141 ~~~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      +..++++.+|+.+|+..||++|||++|+++.
T Consensus       265 ~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         265 PNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            3567889999999999999999999999874

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.09  E-value=1.2e-10  Score=74.85  Aligned_cols=58  Identities=21%  Similarity=0.220  Sum_probs=49.3

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEec-CCCeeeEEEEEeccCC
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYKR-SSFCLKMTTGRSLFET   60 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~~-~~~~v~h~~i~~~~~g   60 (189)
                      ||||.|+|..|+++|..  .++|+||||.|.+.+|.|+|+++.. ..+.++|+.|....++
T Consensus        11 ~~~G~isr~~ae~~L~~--~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~~   69 (131)
T d1uura3          11 IIYGYMGRQEVNDALQN--QDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA   69 (131)
T ss_dssp             SSCBSCCHHHHHHTTSS--CCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGSB
T ss_pred             cEEccCCHHHHHHHHhc--CCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCCC
Confidence            89999999999999953  4689999999998889999999974 3468999999866543

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=1.4e-10  Score=74.72  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=58.5

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCC-CCCCceEEEEEecCCCeeeEEEEEeccCCccCCCCCcC-HhHHHHHhh
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSE-SRKNDYSLSEYKRSSFCLKMTTGRSLFETQKAGRTTIH-YPELVEHYS   78 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~-~~~~~~~ls~~~~~~~~v~h~~i~~~~~gyl~~~~~~~-l~~li~~~~   78 (189)
                      ||||.|++..|+++|..  ..+|+||||+|. +..|.++++++.  .+...|++|.... .|..+...+. +.++|.++.
T Consensus         9 w~~G~isr~~a~~~L~~--~~~GtFLvR~S~~s~~G~~tis~~~--~~~~~~~~i~~~~-p~t~~dl~~~sL~dlI~~y~   83 (141)
T d1bg1a3           9 YIMGFISKERERAILST--KPPGTFLLRFSESSKEGGVTFTWVE--KDISGSTQIQSVE-PYTKQQLNNMSFAEIIMGYK   83 (141)
T ss_dssp             CCCBCCCTTGGGTTTTT--SCTTCBCEEECSSCSSCCEEECCCC--SSSCSSCCCCCCC-CBCGGGGTSSCHHHHTTSCC
T ss_pred             eEEEeCCHHHHHHHhhC--CCCCeEEEEecCCccCCCEEEEEEe--cCcCCceEEeecC-CeecCccccCCHHHHHHhhh
Confidence            99999999999999853  478999999997 457889999988  6777777665332 2444344455 999998887


Q ss_pred             hccCC
Q psy1684          79 KDADG   83 (189)
Q Consensus        79 ~~a~g   83 (189)
                      ..+.+
T Consensus        84 ~~~~~   88 (141)
T d1bg1a3          84 IMDAT   88 (141)
T ss_dssp             CBCTT
T ss_pred             hhccc
Confidence            65543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.71  E-value=3.4e-10  Score=84.83  Aligned_cols=29  Identities=21%  Similarity=0.145  Sum_probs=25.8

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Q psy1684         143 CPPRLYDIMLECWLKDPVKRPTFETLQWK  171 (189)
Q Consensus       143 ~p~~~~~l~~~C~~~~p~~RP~~~~i~~~  171 (189)
                      .++++.+|+.+|+..||.+|||++|+++.
T Consensus       300 ~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         300 EAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             cCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            45678899999999999999999999863

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.013  Score=36.55  Aligned_cols=41  Identities=24%  Similarity=0.274  Sum_probs=33.1

Q ss_pred             CCCCCCChHHHHHHhcCCCCCCCcEEEecCCCC-CCceEEEEEe
Q psy1684           1 WYFGKIKRIEAEKKLLLPENDHGAFLIRDSESR-KNDYSLSEYK   43 (189)
Q Consensus         1 w~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~-~~~~~ls~~~   43 (189)
                      |..|.|++..+..+|..+  ..|+||+|=|.+. .|..++++..
T Consensus         9 ~I~GFIsK~~a~~~L~~~--~~GTFLLRFSdS~~~GgitiawV~   50 (142)
T d1bf5a3           9 CIMGFISKERERALLKDQ--QPGTFLLRFSESSREGAITFTWVE   50 (142)
T ss_dssp             CCCCCCCHHHHHHHTTTC--CSCCCCEEECSSCSSCCEEEEECC
T ss_pred             EEEEEecHHHHHHHhhCC--CCceEEEEeccCccCCceEEEEEE
Confidence            468999999999999554  6799999998865 4777777765

>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Cbl
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.19  E-value=2.7  Score=22.68  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=33.5

Q ss_pred             CCCCCChHHHHHHhcCCCCCCCcEEEecCCCCCCceEEEEEe
Q psy1684           2 YFGKIKRIEAEKKLLLPENDHGAFLIRDSESRKNDYSLSEYK   43 (189)
Q Consensus         2 ~~g~l~~~n~~~lL~~~~~~~g~fLvre~~~~~~~~~ls~~~   43 (189)
                      |+..|.=.++...|....+..|+||.|-|+..-|.+.+-...
T Consensus         5 Y~AFlTYDevk~rL~~~~~kPGSYiFRlSCTrlGQWAIGyvt   46 (88)
T d3buxb3           5 YMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVT   46 (88)
T ss_dssp             BCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEEC
T ss_pred             eeEEEeHHHHHHHHHHHhcCCCceEEeeccccccceeeeeec
Confidence            345666777877787777889999999999999988776655