Diaphorina citri psyllid: psy16876

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120----
MEKCLLRVPEGKFCRSFPQNQIKNMMAHAQKMIEERKKALLALKGTAPVAPTPVVPAGVTPAIIGSAKIPPLMPPAPPSTTAEKDNATYEKAMKIAQLQAQIQSKLSTGVLKPSVPGAKPPGAPATDKPTPLILDSEGRTIDITGKQVQLTHVVPTLKANIRAKKREEFHEKLKEKPTEDLSESKFFDPRISAKSSVRTKRALKFHEPGKFQQLAEQLRVKAQLAKLQADISKNARKTGISSATKLALIAPKMEDDQDEMPEVEWWDAVIMVEETYEKENNIKTSAITNLVEHPIQMKPPSDMAKPVYMPVFLTDKERKKLRRQNRREAWKEEQEKIRLGLEPPPEPKLRISNLMRVLGTEAVQDPTKMEAHVRAQMAKRQKDHEEANASRKLTVEQKREKKIRKIKEDTSLEVHVALRISNLMRVLGTEAVQDPTKMEAHVRAQMAKRQKDHEEANASRKLTVEQKREKKIRKIKEDTSLEVHVAVYRVDDFSNPSKKFKVETNCNQLFMTGAVVMYKDCNVIVVEGGPKQQSKFKRLMMHRIKWEEDMIKSNEGKETPNKCVLVWELGSLSVLMSDIMISGFTTGTAILVILSQIKHVFGIKVKRHIGPFNVIYTLIDVAENIHKTNYVAFGVVVILVSVLIIYNDHFKSKIQKNISFPIPTEMIVIVAGALLSSILDVKHKYNLSNVGKIPIGLPSPQPPPFYLIPKLMLDGLFISIVAFSINISMASILAKKKYKIDSNQELLASGVSNIFASFFSCIPFASSLSRSLVQLQVGGKTQLASGVSCVLLVLILLYIGPFFETLPYCVLTSIVIVAVKGMLNQVKDLKLAFKESYTEACVWCLTFLSVVLLDVDYGLGIGVLCSLIFVVVTGQKVMVYKLGRLIDSNIYVEEDFYESAIDVPGIVILRIIGGMNFINKDKVFHKISKLSLSSEPYPKQIILDMMSLSSVDTSTVKSFLDLYKELMEQGISLHIVKLLEPVKQVNSHPLLNQDDKDVGPKIFNKYKPFKQNEFDEIYHHTEYKKKHLSESLKNKLRSKFKIVNIVLSLFPILEWLPNYNWKNDLSHDMVSGFTVAVLHIPQGMAYSSLGGVPPIVGIYMAVFPVIIYMCMGTSRHISMGTFSV
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEccccccccccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEECHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHcHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccEEEEEEEEcHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccccccEEEEEEEEEcccEEEEEccccHHHHHHHHHHHccccHHHHHccccccccccccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHccccHHccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHccccccEEEHHHHHHHHHHHHHccccccCECcccc
**********GKFCRSF*********************ALLALK*******************************************TYEKAMKIAQLQAQIQS*L*************************LILDSEGRTIDITGKQVQLTHVVPTLKANIRAK**************************I************KFHEPGKFQQLAEQLRV**********************ATKLALIAPKME**QDEMPEVEWWDAVIMVEETYEKENNIKTSAITNLVEHPIQMKPPSDMAKPVYMPVFLTDKE***************************PEPKLRISNLMRVLGTEAVQDPTKMEA**************************************TSLEVHVALRISNLMRVLGTEAVQDPTKMEAHVR***********************K**KKIRKIKEDTSLEVHVAVYRVDDFSNPSKKFKVETNCNQLFMTGAVVMYKDCNVIVVEGGPKQQSKFKRLMMHRIKWEEDMIKSNEGKETPNKCVLVWELGSLSVLMSDIMISGFTTGTAILVILSQIKHVFGIKVKRHIGPFNVIYTLIDVAENIHKTNYVAFGVVVILVSVLIIYNDHFKSKIQKNISFPIPTEMIVIVAGALLSSILDVKHKYNLSNVGKIPIGLPSPQPPPFYLIPKLMLDGLFISIVAFSINISMASILAKKKYKIDSNQELLASGVSNIFASFFSCIPFASSLSRSLVQLQVGGKTQLASGVSCVLLVLILLYIGPFFETLPYCVLTSIVIVAVKGMLNQVKDLKLAFKESYTEACVWCLTFLSVVLLDVDYGLGIGVLCSLIFVVVTGQKVMVYKLGRLIDSNIYVEEDFYESAIDVPGIVILRIIGGMNFINKDKVFHKISKLSLSSEPYPKQIILDMMSLSSVDTSTVKSFLDLYKELMEQGISLHIVKLLEPVKQVNSHPLLNQDDKDVGPKIFNKYKPFKQNEFDEIYHHTEYKKKHLSESLKNKLRSKFKIVNIVLSLFPILEWLPNYNWKNDLSHDMVSGFTVAVLHIPQGMAYSSLGGVPPIVGIYMAVFPVIIYMCMGTSRHISMGTFSV
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MEKCLLRVPEGKFCRSFPQNQIKNMMAHAQKMIEERKKALLALKGTAPVAPTPVVPAGVTPAIIGSAKIPPLMPPAPPSTTAEKDNATYEKAMKIAQLQAQIQSKLSTGVLKPSVPGAKPPGAPATDKPTPLILDSEGRTIDITGKQVQLTHVVPTLKANIRAKKREEFHEKLKEKPTEDLSESKFFDPRISAKSSVRTKRALKFHEPGKFQQLAEQLRVKAQLAKLQADISKNARKTGISSATKLALIAPKMEDDQDEMPEVEWWDAVIMVEETYEKENNIKTSAITNLVEHPIQMKPPSDMAKPVYMPVFLTDKERKKLRRQNRREAWKEEQEKIRLGLEPPPEPKLRISNLMRVLGTEAVQDPTKMEAHVRAQMAKRQKDHEEANASRKLTVEQKREKKIRKIKEDTSLEVHVALRISNLMRVLGTEAVQDPTKMEAHVRAQMAKRQKDHEEANASRKLTVEQKREKKIRKIKEDTSLEVHVAVYRVDDFSNPSKKFKVETNCNQLFMTGAVVMYKDCNVIVVEGGPKQQSKFKRLMMHRIKWEEDMIKSNEGKETPNKCVLVWELGSLSVLMSDIMISGFTTGTAILVILSQIKHVFGIKVKRHIGPFNVIYTLIDVAENIHKTNYVAFGVVVILVSVLIIYNDHFKSKIQKNISFPIPTEMIVIVAGALLSSILDVKHKYNLSNVGKIPIGLPSPQPPPFYLIPKLMLDGLFISIVAFSINISMASILAKKKYKIDSNQELLASGVSNIFASFFSCIPFASSLSRSLVQLQVGGKTQLASGVSCVLLVLILLYIGPFFETLPYCVLTSIVIVAVKGMLNQVKDLKLAFKESYTEACVWCLTFLSVVLLDVDYGLGIGVLCSLIFVVVTGQKVMVYKLGRLIDSNIYVEEDFYESAIDVPGIVILRIIGGMNFINKDKVFHKISKLSLSSEPYPKQIILDMMSLSSVDTSTVKSFLDLYKELMEQGISLHIVKLLEPVKQVNSHPLLNQDDKDVGPKIFNKYKPFKQNEFDEIYHHTEYKKKHLSESLKNKLRSKFKIVNIVLSLFPILEWLPNYNWKNDLSHDMVSGFTVAVLHIPQGMAYSSLGGVPPIVGIYMAVFPVIIYMCMGTSRHISMGTFSV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
U4/U6 small nuclear ribonucleoprotein Prp3 Participates in pre-mRNA splicing. May play a role in the assembly of the U4/U5/U6 tri-snRNP complex.confidentQ5ZJ85
U4/U6 small nuclear ribonucleoprotein Prp3 Participates in pre-mRNA splicing. May play a role in the assembly of the U4/U5/U6 tri-snRNP complex.confidentQ922U1
U4/U6 small nuclear ribonucleoprotein Prp3 Participates in pre-mRNA splicing. May play a role in the assembly of the U4/U5/U6 tri-snRNP complex.confidentO43395

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0015698 [BP]inorganic anion transportprobableGO:0006811, GO:0006810, GO:0006820, GO:0044765, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0065007 [BP]biological regulationprobableGO:0008150
GO:0071011 [CC]precatalytic spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0015103 [MF]inorganic anion transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0008509, GO:0015075, GO:0022857, GO:0003674
GO:0015030 [CC]Cajal bodyprobableGO:0044446, GO:0016604, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LLO, chain A
Confidence level:very confident
Coverage over the Query: 876-926,937-992
View the alignment between query and template
View the model in PyMOL
Template: 3QE7, chain A
Confidence level:confident
Coverage over the Query: 628-839
View the alignment between query and template
View the model in PyMOL
Template: 3QE7, chain A
Confidence level:confident
Coverage over the Query: 740-870
View the alignment between query and template
View the model in PyMOL