Diaphorina citri psyllid: psy16887

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
DHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPHPRRRNQEKFRWSSFFNSLTKVSATCLTSYGFYVDLLFGSNRSDDLDSNPRVYTRPWKNGKPGKSMDLKIRPKVMENVKTLREKPGNSHGICHPVKLNNMFSN
cccccccccccccccccccEEEcccccccccEEEEcccHHHHHHHHHHHccccccccccccccccccccCEEEHHHHHHHHHHHHHHcccccccccccHHHHcccccEEEECcccccccHHcccccccccHHHHHHHHHHcccccccEEEEEEccccccc
*HWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFP****************RWSSFFNSLTKVSATCLTSYGFYVDLLFGSNRSDDLDSNPRVYTRPWKNGK*************************NSHGICHPVKLN*****
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DHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPHPRRRNQEKFRWSSFFNSLTKVSATCLTSYGFYVDLLFGSNRSDDLDSNPRVYTRPWKNGKPGKSMDLKIRPKVMENVKTLREKPGNSHGICHPVKLNNMFSN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TVT, chain A
Confidence level:very confident
Coverage over the Query: 15-159
View the alignment between query and template
View the model in PyMOL