Diaphorina citri psyllid: psy1690


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
VQRVPKTEKSGRLHTSTVSVAVLPQPKDIEVHLDEKDLKVETKRATGAGGQHVNTTDSAVRMTHIPTGISVESQEDRSQIKNRANALAKLKRLIYEIQFEEQENRWVVRLVTKRSARTIIHRTESPIIAFREPCTTLPSSCPAVHLEEKDLKVETKRATGAGGQHVNTTDSADRITDHRIQRTVYNVAEFMSGGAMLHELISDIRQHDYQFRIDQLLS
cccccccccccccECccEEEEEccccccEEEEccccccEEEEEEccccccccccccccEEEcccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHc
***********RLHTSTVSVAVLPQPKDIEVHLDEKDLKVETKRATGAGGQHVNTTDSAVRMTHIPTGISVE************NALAKLKRLIYEIQFEEQENRWVVRLVTKRSARTIIHRTESPIIAFREPCTTLPSSCPAVHLEEKDLKVE*K****AGGQHVNTTDSADRITDHRIQRTVYNVAEFMSGGAMLHELISDIRQHDYQFRIDQLL*
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VQRVPKTEKSGRLHTSTVSVAVLPQPKDIEVHLDEKDLKVETKRATGAGGQHVNTTDSAVRMTHIPTGISVESQEDRSQIKNxxxxxxxxxxxxxxxxxxxxxNRWVVRLVTKRSARTIIHRTESPIIAFREPCTTLPSSCPAVHLEEKDLKVETKRATGAGGQHVNTTDSADRITDHRIQRTVYNVAEFMSGGAMLHELISDIRQHDYQFRIDQLLS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Peptide chain release factor 1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.confidentA8GXI1
Peptide chain release factor 1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.confidentP66020
Peptide chain release factor 1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.confidentA6QIW2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043022 [MF]ribosome bindingprobableGO:0043021, GO:0003674, GO:0005488
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2B3T, chain B
Confidence level:very confident
Coverage over the Query: 1-124,152-156,167-214
View the alignment between query and template
View the model in PyMOL
Template: 1ZBT, chain A
Confidence level:very confident
Coverage over the Query: 110-216
View the alignment between query and template
View the model in PyMOL